Citrus Sinensis ID: 043134

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
Protein Sequence
MEPPKSEPSETSSFISVSNAAHSCIIKPSEKEGQKVQRQNTNPALVLDLSLSNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQKLDLSLKL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccHHHHHcccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccEEEEccEcccccccccccccccccccccccccccccccccccccccccccccEEEEcHccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccHHHcccccEEEcc
Coil and Loop (DISEMBL)
meppksepsetssfisvsnaahsciikpsekegqkvqrqntnpalvldlslsnkdsnrgskpelnlidcfkstdssqdslenndihrqgneteprvfscnycqrkfyssqalgghqnahKRERTLAkrgqristpssssslafghhhnpnsythrsypslaslplhgsfnrslgiqvhsmihkpsfipstinssysysqngwprqpidqqpaigklsQENFQANaaagsssingvskfenvkkfspvtegniggywcdfvspfktkqddlqkldlslkl
Flexible Loop (DISEMBL)
meppksepsetssfisvsnAAHSCIIKPsekegqkvqrqnTNPALVLDLSlsnkdsnrgskpelnLIDCFKSTDSSQDSLENNdihrqgneteprVFSCNYCQRKFYssqalgghqnAHKRERTLAKRGQRIstpssssslafgHHHNPNSYTHRSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAgsssingvsKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQKLDLSLKL
Low Complexity Region (SEG)
MeppksepsetssFISVSNAAHSCIIKPSEKEGQKVQRQNTNPALVLDLSLSNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQanaaagsssingvsKFENVKKFSPVTEGNIGGYWCDFVSPFKTkqddlqkldlslkl
Disordered region (IsUnstruct)
***********************************************************************************************VFSCNYCQRKFYS*******************************************************PLHGSFNRSLGIQVHSMIHKPSFIPSTI**********************************************FENVKKFSPVTEGNIGGYWCDFVSPFK***************
Disordered Region (DISOPRED)
***********************************************************************************************VFSCNYCQRKFYSSQALGGHQNAHK**************************HNPNSYTHRSYP******************************************************************************************************************LDLSLKL
Disordered Region (DISEMBL)
******************NAAHSCIIKPSE*********NTNPALVLDLSLSNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQ********************************FGHHHNPNSYTHRSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQKLDLSLKL
Disordered Region (DISPRO)
*****************************************NPALVLDLSLS*****************************************PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFV****T******KLDLSL**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEPPKSEPSETSSFISVSNAAHSCIIKPSEKEGQKVQRQNTNPALVLDLSLSNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQKLDLSLKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	279	2.2.26 [Sep-21-2011]
Q42485	228	Zinc finger protein 1 OS=	yes	no	0.784	0.960	0.414	1e-36
Q39262	235	Zinc finger protein 3 OS=	no	no	0.684	0.812	0.433	1e-33
Q39266	209	Zinc finger protein 7 OS=	no	no	0.451	0.602	0.377	8e-21
Q39263	260	Zinc finger protein 4 OS=	no	no	0.329	0.353	0.529	1e-19
Q39261	150	Zinc finger protein 2 OS=	no	no	0.143	0.266	0.825	2e-13
Q39265	197	Zinc finger protein 6 OS=	no	no	0.250	0.355	0.447	7e-10
Q9FFX4	161	Zinc finger protein KNUCK	no	no	0.121	0.211	0.764	8e-10
Q6S591	253	Zinc finger protein JAGGE	no	no	0.240	0.264	0.354	7e-06
Q9LHS9	226	Probable transcriptional	no	no	0.154	0.190	0.511	7e-06
Q38895	204	Transcriptional regulator	no	no	0.189	0.259	0.377	2e-05

>sp|Q42485|ZFP1_ARATH Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1

 Score =  153 bits (387), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/263 (41%), Positives = 143/263 (54%), Gaps = 44/263 (16%)

Query: 26  IKPSEKEGQKVQRQNTNPALVLDLSLSNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDI 85
           ++PS K  Q++ +        L+L L+       +  ELNLID FK++ SS    ++   
Sbjct: 1   MEPSIKGDQEMLKIKKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQ-- 58

Query: 86  HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSS---SSSLA 142
             Q    +PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQ      S   SS+ A
Sbjct: 59  --QEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFA 116

Query: 143 FGHHHNPNSYTHRSYPSLASLPLHGSFNR--SLGIQVHSMIHKPSFIP-STINSSYSYSQ 199
           FGH       +   + S+ASLPLHGS N   +LGIQ HS IHKPSF+   T + S+ +  
Sbjct: 117 FGHG------SVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVF-- 168

Query: 200 NGWPRQPIDQQPAIGKLSQENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDF 259
               +Q I Q+P IGK+  E F    A  ++S    +K E                    
Sbjct: 169 ----KQSIHQKPTIGKMLPEKFHLEVAGNNNSNMVAAKLER------------------- 205

Query: 260 VSPFKTKQDD---LQKLDLSLKL 279
           +  FK+ Q+D    +K+DL+LKL
Sbjct: 206 IGHFKSNQEDHNQFKKIDLTLKL 228

Arabidopsis thaliana (taxid: 3702)

>sp|Q39262|ZFP3_ARATH Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1

 Score =  143 bits (360), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/233 (43%), Positives = 122/233 (52%), Gaps = 42/233 (18%)

Query: 60  SKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAH 119
           S  ELNLIDC   T S         ++     TE ++FSCNYCQR FYSSQALGGHQNAH
Sbjct: 32  SSHELNLIDCIDDTTSI--------VNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAH 83

Query: 120 KRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFN--RSLGIQV 177
           KRERTLAKRGQR++  +S    AFGH +             + LP HG +N  RSLGIQ 
Sbjct: 84  KRERTLAKRGQRMAASAS----AFGHPY-----------GFSPLPFHGQYNNHRSLGIQA 128

Query: 178 HSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKL-SQENFQA----------NAA 226
           HS+ HK   + S       Y Q  W R P DQQPAIGK  S +NF            +  
Sbjct: 129 HSISHK---LSSYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMAPSVN 185

Query: 227 AGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQKLDLSLKL 279
           + S++I+  S    V + SP  E   G       +    +Q   QKLDLSLKL
Sbjct: 186 SRSNNIDSPSNTGRVLEGSPTLEQWHGDKGLLLSTSHHEEQ---QKLDLSLKL 235

Arabidopsis thaliana (taxid: 3702)

>sp|Q39266|ZFP7_ARATH Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1

 Score =  100 bits (250), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 83/175 (47%), Gaps = 49/175 (28%)

Query: 60  SKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAH 119
           SKPE N +    S D   +   N+D      E  PRVFSCNYC+RKFYSSQALGGHQNAH
Sbjct: 26  SKPESNHV----SLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAH 81

Query: 120 KRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNRSLGIQVHS 179
           KRERT+AKR   +          FGHHH P +YT                + SLG+Q HS
Sbjct: 82  KRERTMAKRAMHMGR-------MFGHHHRPYTYT----------------SSSLGMQAHS 118

Query: 180 MI---------------HKPSFIPSTINSSYSYSQNG----WP---RQPIDQQPA 212
            +               H   +  +T+   + Y   G    WP   RQ +++  A
Sbjct: 119 GLLHHTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEA 173

Arabidopsis thaliana (taxid: 3702)

>sp|Q39263|ZFP4_ARATH Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2

 Score = 97.4 bits (241), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/102 (52%), Positives = 63/102 (61%), Gaps = 10/102 (9%)

Query: 95  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTH 154
           RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  R+      + +  G   + N    
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGL----AGVFPGRGSSSNYAAA 138

Query: 155 RSYPSLASLPLHGSFN------RSLGIQVHSMIHKPSFIPST 190
            +  +L+ LPLHGS N      R+LGI+ HS  H  S    T
Sbjct: 139 ATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHDVSMTRQT 180

Arabidopsis thaliana (taxid: 3702)

>sp|Q39261|ZFP2_ARATH Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1

 Score = 76.6 bits (187), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/40 (82%), Positives = 37/40 (92%)

Query: 93  EPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRI 132
           +PRVFSCNYCQRKFYSSQALGGHQNAHK ERTLAK+ + +
Sbjct: 48  QPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREL 87

Arabidopsis thaliana (taxid: 3702)

>sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1

 Score = 64.7 bits (156), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 6/76 (7%)

Query: 89  GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHN 148
           G+ +E R + C YC R+F +SQALGGHQNAHK+ER L KR Q ++T           HHN
Sbjct: 33  GSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLAT------RGLPRHHN 86

Query: 149 PNSYTHRSYPSLASLP 164
            + +T+    + A LP
Sbjct: 87  FHPHTNPLLSAFAPLP 102

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1

 Score = 64.7 bits (156), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 26/34 (76%), Positives = 29/34 (85%)

Query: 95  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 128
           R+F C YC RKFY+SQALGGHQNAHKRER  A+R
Sbjct: 36  RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR 69

May function as a transcriptional repressor of cellular proliferation that regulates floral determinacy and relative size of basal pattern elements along the proximo-distal axis of the developing gynoecium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6S591|JAG_ARATH Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1

 Score = 51.6 bits (122), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 12/79 (15%)

Query: 87  RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERT---------LAKRGQRISTPSS 137
           ++G +   +V+ C +C  KF  SQALGGH N H++ER          L  R   I+ P  
Sbjct: 41  KEGKDESGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVYRNDTITPPGI 100

Query: 138 SSSLAFGHHHNPNSYTHRS 156
           S    FG+HH  +   +RS
Sbjct: 101 S---PFGYHHTTDPTIYRS 116

Controls the morphogenesis of lateral organs. Functions in lateral organ shape and is sufficient to induce proliferation and growth of lateral organ tissue. Is necessary and sufficient for bract formation, but its expression is excluded from the cryptic bract, which could be a cause of bractless flowers in Arabidopsis. Participates with FIL and YAB3 in regulating valve margin development. Functions with JGL to define stamen and carpel shape. Functions with AS1 and AS2 in the sepal and petal primordia to repress boundary-specifying genes for normal development of the organs.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2

 Score = 51.6 bits (122), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 34/45 (75%), Gaps = 2/45 (4%)

Query: 94  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSS 138
           PR +SC++C R+F S+QALGGH N H+R+R  A+  Q+  +PSS+
Sbjct: 52  PRSYSCSFCGREFKSAQALGGHMNVHRRDR--ARLKQQSLSPSST 94

Probable transcriptional regulator essential for petal development. Required for the early development of the organ primordia of the second whorl. Acts downstream of AP1 and PTL.

Arabidopsis thaliana (taxid: 3702)

>sp|Q38895|SUP_ARATH Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1

 Score = 49.7 bits (117), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 34/53 (64%)

Query: 78  DSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQ 130
           D+ + +  +  G    PR ++C++C+R+F S+QALGGH N H+R+R   +  Q
Sbjct: 28  DNCQQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQ 80

Probable transcriptional regulator considered as cadastral protein that acts indirectly to prevent the B class homeotic proteins APETALA3 and perhaps PISTILLATA from acting in the gynoecial whorl. Principal function is to balance cell proliferation in the third and fourth whorls of developing flowers thereby maintaining the boundary between stamens and carpels. May fulfill this role by repressing genes implicated in cell division. Plays equally a role in the determinacy of the floral meristem. Is also required for normal ovule development.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	279
255572763	280	zinc finger protein, putative [Ricinus c	0.931	0.928	0.618	5e-81
147832714	267	hypothetical protein VITISV_000223 [Viti	0.921	0.962	0.577	1e-73
225443097	267	PREDICTED: zinc finger protein 1-like [V	0.921	0.962	0.577	2e-73
225430380	286	PREDICTED: zinc finger protein 3-like [V	0.939	0.916	0.505	3e-63
449469240	248	PREDICTED: zinc finger protein 3-like [C	0.777	0.875	0.549	3e-61
296082081	252	unnamed protein product [Vitis vinifera]	0.827	0.916	0.549	3e-61
449530598	249	PREDICTED: zinc finger protein 3-like [C	0.777	0.871	0.549	5e-61
224053400	168	predicted protein [Populus trichocarpa]	0.577	0.958	0.670	5e-50
255548786	253	zinc finger protein, putative [Ricinus c	0.795	0.877	0.485	8e-48
356547466	260	PREDICTED: zinc finger protein 1-like [G	0.874	0.938	0.463	5e-47

>gi|255572763|ref|XP_002527314.1| zinc finger protein, putative [Ricinus communis] gi|223533314|gb|EEF35066.1| zinc finger protein, putative [Ricinus communis]

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 185/299 (61%), Positives = 209/299 (69%), Gaps = 39/299 (13%)

Query: 1   MEPPKSEP--SETSSFISVSNAAHSCIIKPSEKEG----------------QKVQRQNTN 42
           MEPP+SE   SETSS ISVSNA    +  P E +                 QK Q    +
Sbjct: 1   MEPPRSETCHSETSSIISVSNALKPSMESPKEAQQLKQEQEQEQENQEERVQKQQEDGKH 60

Query: 43  PALVLDLSLSNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC 102
             LVLDLSLS+KDS    K ELNLID F     SQ SL +N    QGNETEPRVFSCNYC
Sbjct: 61  DHLVLDLSLSSKDS----KAELNLIDTF-DLGPSQKSLSDNP--HQGNETEPRVFSCNYC 113

Query: 103 QRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLAS 162
           QRKFYSSQALGGHQNAHKRERTLAKRGQRI    S++S A GHHH  +S+ +R Y S+AS
Sbjct: 114 QRKFYSSQALGGHQNAHKRERTLAKRGQRI----SAASFALGHHH--HSHLNR-YSSMAS 166

Query: 163 LPLHGSFNRSLGIQVHSMIHKPSFIPSTI-NSSYSYSQNGWPRQPIDQQPAIGKLSQENF 221
           LPLHGS NRSLGIQVHSMIHKP+FI S+I  SS  Y QNGW RQP DQQPA+G+L+ E+F
Sbjct: 167 LPLHGSLNRSLGIQVHSMIHKPTFIQSSILGSSNLYGQNGWSRQPFDQQPAVGRLASESF 226

Query: 222 QANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCD-FVSPFKTKQDDLQKLDLSLKL 279
                 GS S NGV++FE+ +KFSPV EG IGGYW D  V+  KTK+DDLQKLDLSLKL
Sbjct: 227 H----MGSPSGNGVARFESARKFSPVREG-IGGYWWDGGVNHLKTKKDDLQKLDLSLKL 280

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147832714|emb|CAN74885.1| hypothetical protein VITISV_000223 [Vitis vinifera]

 Score =  282 bits (722), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 167/289 (57%), Positives = 202/289 (69%), Gaps = 32/289 (11%)

Query: 1   MEPPKSEP--SETSSFISVSNAA---HSCIIKPSEKEGQKVQRQN----TNPALVLDLSL 51
           ME P+SEP  SETSS ISVS AA   ++ +  P E + Q+ Q +N    TNP LVLDLSL
Sbjct: 1   MEIPRSEPCLSETSSIISVSEAAPSLNTSMDSPKEGKQQEXQDRNQEELTNPDLVLDLSL 60

Query: 52  SNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQA 111
           S++D  +GS+PELNLI+ F+   S     +N     QGNE EPRVFSCNYCQRKFYSSQA
Sbjct: 61  SSRDLEQGSRPELNLINSFEMGSS-----QNQSEIPQGNEGEPRVFSCNYCQRKFYSSQA 115

Query: 112 LGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNR 171
           LGGHQNAHKRERTLAKRGQRI     ++S+AFGH   PN Y    + S+ASLPLHGSFNR
Sbjct: 116 LGGHQNAHKRERTLAKRGQRI----GAASVAFGHPL-PNPYR---FSSMASLPLHGSFNR 167

Query: 172 SLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSS 231
           SLGIQ HS+IHKPS + ST+     Y   GW R PIDQQPAIG+L+ EN+   +++ S  
Sbjct: 168 SLGIQAHSLIHKPSSLSSTL-----YGHQGWSRLPIDQQPAIGRLAPENYHVGSSSSSGG 222

Query: 232 INGVSKFENVKKFS-PVTEGNIGGYWCDFVSPFKTKQDDLQKLDLSLKL 279
               ++FE V+KFS P +EG IGGYW +  +  K  QD+LQKLDLSLKL
Sbjct: 223 ---AARFETVRKFSRPASEG-IGGYWWNNSNNLKMNQDELQKLDLSLKL 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443097|ref|XP_002272545.1| PREDICTED: zinc finger protein 1-like [Vitis vinifera]

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 167/289 (57%), Positives = 203/289 (70%), Gaps = 32/289 (11%)

Query: 1   MEPPKSEP--SETSSFISVSNAA---HSCIIKPSEKEGQKVQRQN----TNPALVLDLSL 51
           ME P+SEP  SETSS ISVS AA   ++ +  P E + Q+ Q +N    TNP LVLDLSL
Sbjct: 1   MEIPRSEPCLSETSSIISVSEAAPSLNTSMDSPKEGKQQEGQDRNQEELTNPDLVLDLSL 60

Query: 52  SNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQA 111
           S++D  +GS+PELNLI+ F+   S     +N+    QGNE EPRVFSCNYCQRKFYSSQA
Sbjct: 61  SSRDLEQGSRPELNLINSFEMGSS-----QNHSEIPQGNEGEPRVFSCNYCQRKFYSSQA 115

Query: 112 LGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNR 171
           LGGHQNAHKRERTLAKRGQRI     ++S+AFGH   PN Y    + S+ASLPLHGSFNR
Sbjct: 116 LGGHQNAHKRERTLAKRGQRI----GAASVAFGHPL-PNPYR---FSSMASLPLHGSFNR 167

Query: 172 SLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSS 231
           SLGIQ HS+IHKPS + ST+     Y   GW R PIDQQPAIG+L+ EN+   +++ S  
Sbjct: 168 SLGIQAHSLIHKPSSLSSTL-----YGHQGWSRLPIDQQPAIGRLAPENYHVGSSSSSGG 222

Query: 232 INGVSKFENVKKFS-PVTEGNIGGYWCDFVSPFKTKQDDLQKLDLSLKL 279
               ++FE V+KFS P +EG IGGYW +  +  K  QD+LQKLDLSLKL
Sbjct: 223 ---AARFETVRKFSRPASEG-IGGYWWNNSNNLKMNQDELQKLDLSLKL 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430380|ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis vinifera]

 Score =  248 bits (632), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/287 (50%), Positives = 178/287 (62%), Gaps = 25/287 (8%)

Query: 8   PSETSSFISVSNAAHSCIIKPSEKEGQ------------KVQRQNTNPALVLDLSLSNKD 55
           PSETS+ I  +  A SC  KPS+   +            +   + T   L+ +L L +KD
Sbjct: 10  PSETSTIIISTPEAASCPDKPSQSPKEINLEEEEEEEEEEDHEKKTKVDLLFNLELHSKD 69

Query: 56  S-NRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGG 114
           + + G   ELNLIDC  +TDSSQ S E      Q  + EPRVFSCNYCQRKFYSSQALGG
Sbjct: 70  AADHGFNTELNLIDCL-NTDSSQTSSEIP----QPADAEPRVFSCNYCQRKFYSSQALGG 124

Query: 115 HQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNRSLG 174
           HQNAHKRERTLAKRGQR+  P  +++ AFGH +    + H+ Y S+ASLPLHG++NRSLG
Sbjct: 125 HQNAHKRERTLAKRGQRLGAPMVAAATAFGHPY----FHHQHYSSMASLPLHGAYNRSLG 180

Query: 175 IQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSSING 234
           IQVHSMIHKPS    +  S   Y    W R PIDQQPA+G+L+ EN      AG  S  G
Sbjct: 181 IQVHSMIHKPSLTTPSSGSGNLYGHRSWSRPPIDQQPAVGRLAVENCHEGVTAGPLSRGG 240

Query: 235 VSKFENVKKF--SPVTEGNIGGYWCDFVSPFKTKQDDLQKLDLSLKL 279
           + +F+ V+    S   EG IGG+        KT QD+LQKLDLSLKL
Sbjct: 241 IGRFDTVRMMINSQANEG-IGGFCWTGGGRLKTNQDELQKLDLSLKL 286

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469240|ref|XP_004152329.1| PREDICTED: zinc finger protein 3-like [Cucumis sativus]

 Score =  241 bits (615), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/244 (54%), Positives = 159/244 (65%), Gaps = 27/244 (11%)

Query: 4   PKSEPSETSSFISVSNAAHSCIIKPSEKEGQKVQRQNTNPALVLDLSLSNKDSNRGSKPE 63
           P+  PSETS+ IS S ++  C      K  +   + N N  + LDL+LSN DS+ GS PE
Sbjct: 6   PEPSPSETSTIISASESSPPC-----PKGDRTTDQINPNSHMGLDLTLSNNDSDHGSNPE 60

Query: 64  LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER 123
           LNLIDCF +  +++ +           ETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER
Sbjct: 61  LNLIDCFDANLATEPT---------DTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER 111

Query: 124 TLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNRSLGIQVHSMIHK 183
           TLAKR QR+ + S+     FG         HR Y SLASLPLHGSFNRSLGIQ HSM+HK
Sbjct: 112 TLAKRTQRVGSGSN-----FG-------LAHR-YSSLASLPLHGSFNRSLGIQAHSMVHK 158

Query: 184 PSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSSINGVSKFENVKK 243
           PS   S I SS  Y  +GW RQP+DQ PAIG+L Q N    +  G SS  G ++FE VK+
Sbjct: 159 PSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSHRGISSTTGAARFEGVKR 218

Query: 244 FSPV 247
           FSPV
Sbjct: 219 FSPV 222

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082081|emb|CBI21086.3| unnamed protein product [Vitis vinifera]

 Score =  241 bits (615), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/244 (54%), Positives = 161/244 (65%), Gaps = 13/244 (5%)

Query: 39  QNTNPALVLDLSLSNKDS-NRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVF 97
           Q T   L+ +L L +KD+ + G   ELNLIDC  +TDSSQ S E      Q  + EPRVF
Sbjct: 19  QLTKVDLLFNLELHSKDAADHGFNTELNLIDCL-NTDSSQTSSEIP----QPADAEPRVF 73

Query: 98  SCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSY 157
           SCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQR+  P  +++ AFGH +    + H+ Y
Sbjct: 74  SCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRLGAPMVAAATAFGHPY----FHHQHY 129

Query: 158 PSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLS 217
            S+ASLPLHG++NRSLGIQVHSMIHKPS    +  S   Y    W R PIDQQPA+G+L+
Sbjct: 130 SSMASLPLHGAYNRSLGIQVHSMIHKPSLTTPSSGSGNLYGHRSWSRPPIDQQPAVGRLA 189

Query: 218 QENFQANAAAGSSSINGVSKFENVKKF--SPVTEGNIGGYWCDFVSPFKTKQDDLQKLDL 275
            EN      AG  S  G+ +F+ V+    S   EG IGG+        KT QD+LQKLDL
Sbjct: 190 VENCHEGVTAGPLSRGGIGRFDTVRMMINSQANEG-IGGFCWTGGGRLKTNQDELQKLDL 248

Query: 276 SLKL 279
           SLKL
Sbjct: 249 SLKL 252

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530598|ref|XP_004172281.1| PREDICTED: zinc finger protein 3-like [Cucumis sativus]

 Score =  240 bits (612), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/244 (54%), Positives = 159/244 (65%), Gaps = 27/244 (11%)

Query: 4   PKSEPSETSSFISVSNAAHSCIIKPSEKEGQKVQRQNTNPALVLDLSLSNKDSNRGSKPE 63
           P+  PSETS+ IS S ++  C      K  +   + N N  + LDL+LSN DS+ GS PE
Sbjct: 6   PEPSPSETSTIISASESSPPC-----PKGDRTTDQINPNSHMGLDLTLSNNDSDHGSNPE 60

Query: 64  LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER 123
           LNLIDCF +  +++ +           ETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER
Sbjct: 61  LNLIDCFDANLATEPT---------DTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER 111

Query: 124 TLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNRSLGIQVHSMIHK 183
           TLAKR QR+ + S+     FG         HR Y SLASLPLHGSFNRSLGIQ HSM+HK
Sbjct: 112 TLAKRTQRVGSGSN-----FG-------LAHR-YSSLASLPLHGSFNRSLGIQAHSMVHK 158

Query: 184 PSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSSINGVSKFENVKK 243
           PS   S I SS  Y  +GW RQP+DQ PAIG+L Q N    +  G SS  G ++FE VK+
Sbjct: 159 PSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKR 218

Query: 244 FSPV 247
           FSPV
Sbjct: 219 FSPV 222

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053400|ref|XP_002297800.1| predicted protein [Populus trichocarpa] gi|222845058|gb|EEE82605.1| predicted protein [Populus trichocarpa]

 Score =  204 bits (518), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/179 (67%), Positives = 137/179 (76%), Gaps = 18/179 (10%)

Query: 60  SKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAH 119
           SKP+LNLID F   D S+ SL+      QGNETEPRVFSCNYCQRKFYSSQALGGHQNAH
Sbjct: 6   SKPQLNLIDSF-DMDPSRKSLDTP----QGNETEPRVFSCNYCQRKFYSSQALGGHQNAH 60

Query: 120 KRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRS-YPSLASLPLHGSFNRSLGIQVH 178
           KRERTL+KRGQRI    S++S A      PN Y+H++ Y S+ASLPLHGSFNRSLGIQVH
Sbjct: 61  KRERTLSKRGQRI----SAASFAL---LQPN-YSHQNGYTSMASLPLHGSFNRSLGIQVH 112

Query: 179 SMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQ-ANAAAGSSSINGVS 236
           SMIHKP    ST +SS  Y QNGW R+PIDQQPAIG+L+ + FQ A +  GSSS NGV+
Sbjct: 113 SMIHKPF---STSSSSSIYGQNGWSRKPIDQQPAIGRLASDKFQMATSIKGSSSSNGVA 168

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548786|ref|XP_002515449.1| zinc finger protein, putative [Ricinus communis] gi|223545393|gb|EEF46898.1| zinc finger protein, putative [Ricinus communis]

 Score =  196 bits (499), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/247 (48%), Positives = 147/247 (59%), Gaps = 25/247 (10%)

Query: 34  QKVQRQNTNPALVLDLSLSNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETE 93
           Q+ + +  NP+L+LDL L + D+  G   ELNLIDCF   DSS     N D+       E
Sbjct: 31  QEQEEEKGNPSLLLDLELISSDTEHGFSQELNLIDCF-DVDSSDTPQANTDV-------E 82

Query: 94  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYT 153
            R+FSCNYCQRKFYSS+ALGGHQNAHKRERTLA+RGQ+I+   +S   AFGH +      
Sbjct: 83  QRIFSCNYCQRKFYSSKALGGHQNAHKRERTLARRGQKINNHVAS---AFGHTY----LH 135

Query: 154 HRSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYS-QNGWPRQPIDQQPA 212
           H  Y S+A+LPLHG   RSLGI+VHSMIHKP  I  +   +   S   GW R  ID++PA
Sbjct: 136 HHYYTSMAALPLHG---RSLGIKVHSMIHKPCHISFSNGLTGKMSGYGGWSRPLIDKKPA 192

Query: 213 IGKLSQENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQK 272
           IGKL    +  NA    +      +F   K  S   +  IG Y       FK  QD+LQK
Sbjct: 193 IGKLPTVEYNVNATIAPAPPR-AGRFNLEKSDSSAADEGIGNY-----CHFKCHQDELQK 246

Query: 273 LDLSLKL 279
           LDLSLKL
Sbjct: 247 LDLSLKL 253

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547466|ref|XP_003542133.1| PREDICTED: zinc finger protein 1-like [Glycine max]

 Score =  194 bits (492), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 133/287 (46%), Positives = 168/287 (58%), Gaps = 43/287 (14%)

Query: 4   PKSEPSETSSFISVSNAAHSCIIKPSEKEGQKVQRQ-NTNP-----ALVLDLSLSNKDS- 56
           P+S PSE      +              + QK +++ N +P      LVLDLSL +K S 
Sbjct: 6   PESRPSENLKIPFLETPPPCSKPPVPSMDTQKEKKEDNEHPHESASDLVLDLSLPSKHSG 65

Query: 57  -NRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGH 115
            +  SKPELNLI+C   T+ S +S E++  H  G+E EPR+FSCNYCQRKFYSSQALGGH
Sbjct: 66  GDGESKPELNLINCI-DTNLSMNSSESS--HGHGDELEPRIFSCNYCQRKFYSSQALGGH 122

Query: 116 QNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNR-SLG 174
           QNAHKRERTL KRG +     ++ S+ F           R Y S+ASLPLHGS+NR SLG
Sbjct: 123 QNAHKRERTLVKRGHKA---GAAVSIDFA----------RRYSSMASLPLHGSYNRSSLG 169

Query: 175 IQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSSING 234
           IQ HSMI KPS+       S S++Q    ++P+  QP IG  S+           SS+ G
Sbjct: 170 IQAHSMISKPSYQSPFFGLSRSHAQ----KRPMFSQPPIGTESE-----------SSLTG 214

Query: 235 VSKFENVKKFSP--VTEGNIGGYWCDFVSPFKTKQDDLQKLDLSLKL 279
                 +  FSP  V EG +GGYW D V+  KTKQ++L KLDLSLKL
Sbjct: 215 GIPVPRLGNFSPRLVPEG-LGGYWLDSVNHLKTKQEELHKLDLSLKL 260

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	279
TAIR|locus:2025777	228	ZFP1 "AT1G80730" [Arabidopsis	0.727	0.890	0.462	2.4e-37
TAIR|locus:2146960	235	ZFP3 "AT5G25160" [Arabidopsis	0.534	0.634	0.491	6e-32
TAIR|locus:2183780	272	AT5G10970 "AT5G10970" [Arabido	0.476	0.488	0.471	4.5e-27
TAIR|locus:2825107	209	ZFP7 "AT1G24625" [Arabidopsis	0.519	0.693	0.408	1.3e-22
TAIR|locus:2013820	260	ZFP4 "AT1G66140" [Arabidopsis	0.494	0.530	0.437	1.5e-21
TAIR|locus:2174547	150	ZFP2 "AT5G57520" [Arabidopsis	0.229	0.426	0.578	2.6e-15
TAIR|locus:2181007	215	AT5G01860 "AT5G01860" [Arabido	0.154	0.2	0.627	6.1e-14
TAIR|locus:2095883	253	GIS "AT3G58070" [Arabidopsis t	0.440	0.486	0.352	1.3e-13
TAIR|locus:2064579	257	ZFP8 "AT2G41940" [Arabidopsis	0.412	0.447	0.372	1.6e-13
TAIR|locus:2019723	197	ZFP6 "AT1G67030" [Arabidopsis	0.272	0.385	0.460	1.9e-12

TAIR|locus:2025777 ZFP1 "AT1G80730" [Arabidopsis thaliana (taxid:3702)]

 Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
 Identities = 104/225 (46%), Positives = 129/225 (57%)

Query:    26 IKPSEKEGQKVQRQNTNPALVLDLSLSNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDI 85
             ++PS K  Q++ +        L+L L+       +  ELNLID FK++ SS    +    
Sbjct:     1 MEPSIKGDQEMLKIKKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQ---- 56

Query:    86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRIS-TPSS--SSSLA 142
             H+Q    +PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQ    T SS  SS+ A
Sbjct:    57 HQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFA 116

Query:   143 FGHHHNPNSYTHRSYPSLASLPLHGSFN-RS-LGIQVHSMIHKPSFIP-STINSSYSYSQ 199
             FGH     S +   + S+ASLPLHGS N RS LGIQ HS IHKPSF+   T + S+ + Q
Sbjct:   117 FGH----GSVSR--FASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVFKQ 170

Query:   200 NGWPRQPIDQQPAIGKLSQENFQXXXXXXXXXXXXXXKFENVKKF 244
             +      I Q+P IGK+  E F               K E +  F
Sbjct:   171 S------IHQKPTIGKMLPEKFHLEVAGNNNSNMVAAKLERIGHF 209

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009640 "photomorphogenesis" evidence=IEP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2146960 ZFP3 "AT5G25160" [Arabidopsis thaliana (taxid:3702)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 88/179 (49%), Positives = 106/179 (59%)

Query:    47 LDLSLSNKDSN-RGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRK 105
             L+ S+ +++ +   S  ELNLIDC   T S         ++     TE ++FSCNYCQR 
Sbjct:    18 LNQSIEDEERDVHNSSHELNLIDCIDDTTSI--------VNESTTSTEQKLFSCNYCQRT 69

Query:   106 FYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPL 165
             FYSSQALGGHQNAHKRERTLAKRGQR++  +S    AFGH   P  ++    P    LP 
Sbjct:    70 FYSSQALGGHQNAHKRERTLAKRGQRMAASAS----AFGH---PYGFS----P----LPF 114

Query:   166 HGSFN--RSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKL-SQENF 221
             HG +N  RSLGIQ HS+ HK S   S       Y Q  W R P DQQPAIGK  S +NF
Sbjct:   115 HGQYNNHRSLGIQAHSISHKLS---SYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNF 170

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2183780 AT5G10970 "AT5G10970" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 75/159 (47%), Positives = 96/159 (60%)

Query:    29 SEKEGQKVQRQNTNPALVLDLSLSNKDSNRGS-KPELNLIDCFKSTDSSQDSLENNDIHR 87
             +++E    Q++     + LDL L+  DS++     ELNL+DC + T     S   +    
Sbjct:    43 AQEEDDHDQKEGVE-GIKLDLMLAGYDSSQPQLNQELNLLDCLE-TGVVTPSFNGS---- 96

Query:    88 QGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHH 147
                 TE ++FSCNYCQR FYSSQALGGHQNAHKRERTLAKRGQR++     S+ AFGH  
Sbjct:    97 --TSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMA-----SAAAFGH-- 147

Query:   148 NPNSYTHRSYPSLASLPLHGSF-NRSLGIQVHSMIHKPS 185
              P  +        A +P HG + NR+LGIQ HSM HKPS
Sbjct:   148 -PYGF--------APVPFHGQYSNRTLGIQAHSMSHKPS 177

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2825107 ZFP7 "AT1G24625" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 69/169 (40%), Positives = 88/169 (52%)

Query:    52 SNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQA 111
             SN+D    SKPE N +    S D   +   N+D      E  PRVFSCNYC+RKFYSSQA
Sbjct:    21 SNQDL---SKPESNHV----SLDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQA 73

Query:   112 LGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLA-SLPLHGSFN 170
             LGGHQNAHKRERT+AKR   +          FGHHH P +YT  S    A S  LH + +
Sbjct:    74 LGGHQNAHKRERTMAKRAMHMGR-------MFGHHHRPYTYTSSSLGMQAHSGLLHHTLS 126

Query:   171 RSLGIQVHSMIHKPSFIPSTINSSYSYSQNG----WP---RQPIDQQPA 212
             +   +   S  H   +  +T+   + Y   G    WP   RQ +++  A
Sbjct:   127 QPQPLV--SRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEA 173

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0046982 "protein heterodimerization activity" evidence=IPI

TAIR|locus:2013820 ZFP4 "AT1G66140" [Arabidopsis thaliana (taxid:3702)]

 Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
 Identities = 66/151 (43%), Positives = 83/151 (54%)

Query:    47 LDLSLS-NKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRK 105
             L+LSLS N ++N     E + +    S+ S   + E     +Q      RVFSCNYCQRK
Sbjct:    36 LNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQ--QQQPSVSKRVFSCNYCQRK 93

Query:   106 FYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPL 165
             FYSSQALGGHQNAHKRERTLAKR  R+      + +  G   + N     +  +L+ LPL
Sbjct:    94 FYSSQALGGHQNAHKRERTLAKRAMRMGL----AGVFPGRGSSSNYAAAATAAALSCLPL 149

Query:   166 HGSFN------RSLGIQVHSMIHKPSFIPST 190
             HGS N      R+LGI+ HS  H  S    T
Sbjct:   150 HGSGNGNMTSFRTLGIRAHSSAHDVSMTRQT 180

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2174547 ZFP2 "AT5G57520" [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 37/64 (57%), Positives = 46/64 (71%)

Query:    75 SSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRIST 134
             SS  S  ++  +      +PRVFSCNYCQRKFYSSQALGGHQNAHK ERTLAK+ + +  
Sbjct:    30 SSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFR 89

Query:   135 PSSS 138
              S++
Sbjct:    90 SSNT 93

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2181007 AT5G01860 "AT5G01860" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
 Identities = 27/43 (62%), Positives = 37/43 (86%)

Query:    90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRI 132
             NE + RVF+C +C+++F +SQALGGHQNAHK+ER+LAKR + I
Sbjct:    60 NEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEI 102

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2095883 GIS "AT3G58070" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 49/139 (35%), Positives = 74/139 (53%)

Query:    39 QNTNPALVLDLSLSNKDSNRGSKPELNLIDCFKSTDSSQDSLENN--DIHRQGNE-TEPR 95
             +N  P  V     + +D +  +  E +  D +++ +  ++  E+   D     N  +  R
Sbjct:    31 KNPKPIRVFGKDFTGRDFSITTGQE-DYTDPYQTKNKEEEEEEDQTGDNSTDNNSISHNR 89

Query:    96 VFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHR 155
              F C+YC R F +SQALGGHQNAHKRER LAKRG  +S+        + +H + N Y++R
Sbjct:    90 RFECHYCFRNFPTSQALGGHQNAHKRERQLAKRG--VSS--------YFYHPDNNPYSYR 139

Query:   156 SYPSLASLPLHGSFNRSLG 174
              YPS  + PL  +  RS G
Sbjct:   140 HYPSWTNGPLTAA--RSYG 156

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009739 "response to gibberellin stimulus" evidence=IMP

GO:0010026 "trichome differentiation" evidence=IMP

GO:0010091 "trichome branching" evidence=IMP

TAIR|locus:2064579 ZFP8 "AT2G41940" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 51/137 (37%), Positives = 69/137 (50%)

Query:    71 KSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQ 130
             +S+++ +D  +  D  +  +    R F C+YC R F +SQALGGHQNAHKRER  AKRG 
Sbjct:    69 ESSENIKDKDKEKDKDKDKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRG- 127

Query:   131 RISTPSSSSSLAFGHHHNP----------NSYTHRSYPSL---ASLPLHGSFNRSLGIQV 177
                  S +S L   HHH P          N++ HR YPS    A     G  +++     
Sbjct:   128 -----SMTSYL---HHHQPHDPHHIYGFLNNHHHRHYPSWTTEARSYYGGGGHQTPSYYS 179

Query:   178 HSMIHKPSFIPSTINSS 194
              + +  PS  P TIN S
Sbjct:   180 RNTLAPPSSNPPTINGS 196

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0010026 "trichome differentiation" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

TAIR|locus:2019723 ZFP6 "AT1G67030" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 35/76 (46%), Positives = 43/76 (56%)

Query:    89 GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHN 148
             G+ +E R + C YC R+F +SQALGGHQNAHK+ER L KR Q ++T        F  H N
Sbjct:    33 GSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTN 92

Query:   149 PNSYTHRSYPSLASLP 164
             P        P L S P
Sbjct:    93 PLLSAFAPLPHLLSQP 108

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	279
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.05
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.72
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	98.68
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.55
KOG3576	267	consensus Ovo and related transcription factors [T	98.51
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.38
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.33
PHA02768	55	hypothetical protein; Provisional	98.28
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.18
KOG3576	267	consensus Ovo and related transcription factors [T	98.09
PHA00733	128	hypothetical protein	97.53
PHA00732	79	hypothetical protein	97.13
PHA00616	44	hypothetical protein	97.02
PHA02768	55	hypothetical protein; Provisional	96.97
PHA00616	44	hypothetical protein	96.97
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.38
KOG3993	500	consensus Transcription factor (contains Zn finger	96.18
PHA00733	128	hypothetical protein	96.16
PLN03086	567	PRLI-interacting factor K; Provisional	96.14
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	95.93
KOG3608	467	consensus Zn finger proteins [General function pre	95.91
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	94.93
KOG3608	467	consensus Zn finger proteins [General function pre	94.77
PLN03086	567	PRLI-interacting factor K; Provisional	94.36
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	93.88
smart00355	26	ZnF_C2H2 zinc finger.	93.87
PRK04860	160	hypothetical protein; Provisional	93.65
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	92.26
KOG2893	341	consensus Zn finger protein [General function pred	92.24
COG5048	467	FOG: Zn-finger [General function prediction only]	91.9
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	91.61
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	91.53
PHA00732	79	hypothetical protein	90.5
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	90.47
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	90.07
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	89.88
smart00355	26	ZnF_C2H2 zinc finger.	88.42
COG5189	423	SFP1 Putative transcriptional repressor regulating	87.75
KOG3993	500	consensus Transcription factor (contains Zn finger	87.64
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	87.13
KOG2186	276	consensus Cell growth-regulating nucleolar protein	81.96

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.05  E-value=3.7e-11  Score=111.07  Aligned_cols=62  Identities=16%  Similarity=0.168  Sum_probs=54.8

Q ss_pred             ccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhhc
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRG  129 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr~  129 (279)
                      +++|.. |||.|.... .|.-|.|+|||||||.|..|+|.|..+++|+.||++|.+.|.|+...
T Consensus       187 ~c~C~i-CGKaFSRPW-LLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~  248 (279)
T KOG2462|consen  187 PCECGI-CGKAFSRPW-LLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPR  248 (279)
T ss_pred             Cccccc-ccccccchH-HhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcc
Confidence            478999 999995444 68999999999999999999999999999999999999999888764

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.72  E-value=2.9e-09  Score=108.84  Aligned_cols=71  Identities=20%  Similarity=0.336  Sum_probs=62.6

Q ss_pred             CCCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh--hcCCCC
Q 043134           61 KPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK--RGQRIS  133 (279)
Q Consensus        61 ~~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k--r~~~~~  133 (279)
                      +.+..+|.|.+ |+|.|...+ .|.+|.=-|+|.|||+|..|.|.|..+.+|..|+|.|.|||||++  .++|.+
T Consensus       889 kte~gmyaCDq-CDK~FqKqS-SLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFS  961 (1007)
T KOG3623|consen  889 KTEDGMYACDQ-CDKAFQKQS-SLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFS  961 (1007)
T ss_pred             cCccccchHHH-HHHHHHhhH-HHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcc
Confidence            56677899999 999996555 599999999999999999999999999999999999999999975  445543

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=98.68  E-value=1.1e-08  Score=94.72  Aligned_cols=64  Identities=17%  Similarity=0.218  Sum_probs=56.8

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhhc
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRG  129 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr~  129 (279)
                      .+.+.+.|.. |||.|.+... |..|.|+|+  -+++|.+|||.|+..--|.+|+|+|||||||....
T Consensus       157 ~s~ka~~C~~-C~K~YvSmpA-LkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~h  220 (279)
T KOG2462|consen  157 DSKKAFSCKY-CGKVYVSMPA-LKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPH  220 (279)
T ss_pred             cccccccCCC-CCceeeehHH-HhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCc
Confidence            3466789999 9999987774 999999987  68999999999999999999999999999998763

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.55  E-value=1.8e-08  Score=104.35  Aligned_cols=67  Identities=21%  Similarity=0.291  Sum_probs=61.0

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhhcCCCC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRIS  133 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr~~~~~  133 (279)
                      |-..|.. ||+.|.+.. .|..|+|+|+++|||.|.+|++.|.....|+.||.+|.+..+..||+.+..
T Consensus       878 n~h~C~v-Cgk~FsSSs-ALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~srrG~~~~  944 (958)
T KOG1074|consen  878 NAHVCNV-CGKQFSSSA-ALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPSRRGPSPF  944 (958)
T ss_pred             chhhhcc-chhcccchH-HHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCccCCCCcc
Confidence            4467999 999997665 599999999999999999999999999999999999999999999976643

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.51  E-value=5e-08  Score=87.58  Aligned_cols=69  Identities=14%  Similarity=0.224  Sum_probs=52.6

Q ss_pred             CCCCCCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           58 RGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        58 ~~~~~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .++..+.+.|.|.. |+|.|.-.. .|.+|++.|..-|.|-|..|||.|...-.|++|+|+|+|-|||+.-
T Consensus       109 ~gsssd~d~ftCrv-CgK~F~lQR-mlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~  177 (267)
T KOG3576|consen  109 IGSSSDQDSFTCRV-CGKKFGLQR-MLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCS  177 (267)
T ss_pred             ccCCCCCCeeeeeh-hhhhhhHHH-HHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchh
Confidence            44556678888988 888885443 5777888887777788888888888888888888888888887654

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.38  E-value=1.9e-07  Score=96.97  Aligned_cols=56  Identities=21%  Similarity=0.317  Sum_probs=50.4

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      ++-.|.. |-+..+..+ .|..|.|+|+|||||+|+.|||.|.++.+|+.|+.+|+..
T Consensus       604 dPNqCii-C~rVlSC~s-aLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~  659 (958)
T KOG1074|consen  604 DPNQCII-CLRVLSCPS-ALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAK  659 (958)
T ss_pred             Cccceee-eeecccchh-hhhhhhhcccCcCccccccccchhccccchhhcccccccC
Confidence            4567999 999997666 5999999999999999999999999999999999999754

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.33  E-value=1.7e-07  Score=96.17  Aligned_cols=54  Identities=15%  Similarity=0.295  Sum_probs=48.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccc
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNA  118 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~  118 (279)
                      -..-|+|.+ |||.|.-+. .|+.|.|||.|||||.|+.|+|.|+.+..+..||..
T Consensus       278 ~lRKFKCtE-CgKAFKfKH-HLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  278 LLRKFKCTE-CGKAFKFKH-HLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhccccccc-cchhhhhHH-HHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            345699999 999997766 599999999999999999999999999999999864

>PHA02768 hypothetical protein; Provisional

Probab=98.28  E-value=3.8e-07  Score=65.91  Aligned_cols=43  Identities=9%  Similarity=0.055  Sum_probs=38.3

Q ss_pred             cccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCcccc
Q 043134           67 IDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALG  113 (279)
Q Consensus        67 f~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~  113 (279)
                      |.|.+ ||+.|.... .|..|+++|+  ++|+|..|+|.|.+.+.|.
T Consensus         6 y~C~~-CGK~Fs~~~-~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPI-CGEIYIKRK-SMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcch-hCCeeccHH-HHHHHHHhcC--CcccCCcccceecccceeE
Confidence            78999 999997665 5999999999  7999999999999887775

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.18  E-value=8.4e-07  Score=54.45  Aligned_cols=25  Identities=20%  Similarity=0.517  Sum_probs=23.3

Q ss_pred             HHHHhhhcCCCceeecCCCCcccCC
Q 043134           84 DIHRQGNETEPRVFSCNYCQRKFYS  108 (279)
Q Consensus        84 L~~Hqr~HtgeKPfsC~~CgKsFss  108 (279)
                      |..|+++|++++||.|++|++.|.+
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            7899999999999999999999963

...

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.09  E-value=2.9e-07  Score=82.67  Aligned_cols=68  Identities=16%  Similarity=0.284  Sum_probs=55.4

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccc-cccCCCchhhhhcCC
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQ-NAHKRERTLAKRGQR  131 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hq-r~HtgERpy~kr~~~  131 (279)
                      .+++.+-|.- |||.|...- .|.+|.|+|||-+||+|..|+|.|.+.-.|..|. .+|.-...|+=+.+|
T Consensus       141 ~~vkr~lct~-cgkgfndtf-dlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr  209 (267)
T KOG3576|consen  141 SDVKRHLCTF-CGKGFNDTF-DLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERR  209 (267)
T ss_pred             cHHHHHHHhh-ccCcccchh-hhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhh
Confidence            4455677999 999996554 5999999999999999999999999999999996 467665556554444

>PHA00733 hypothetical protein

Probab=97.53  E-value=2.9e-05  Score=64.91  Aligned_cols=51  Identities=12%  Similarity=0.069  Sum_probs=41.6

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccc
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNA  118 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~  118 (279)
                      ..+|.|.. ||+.|.... .|..|++.|  +.+|.|..|++.|.....|..|++-
T Consensus        71 ~kPy~C~~-Cgk~Fss~s-~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~  121 (128)
T PHA00733         71 VSPYVCPL-CLMPFSSSV-SLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCK  121 (128)
T ss_pred             CCCccCCC-CCCcCCCHH-HHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHH
Confidence            46789999 999997665 488888876  3579999999999999999888653

>PHA00732 hypothetical protein

Probab=97.13  E-value=0.00029  Score=54.43  Aligned_cols=44  Identities=16%  Similarity=0.244  Sum_probs=34.6

Q ss_pred             ccccCccCCccccCCchhHHHHhhh-cCCCceeecCCCCcccCCCcccccccc
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQGN-ETEPRVFSCNYCQRKFYSSQALGGHQN  117 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hqr~-HtgeKPfsC~~CgKsFssssaL~~Hqr  117 (279)
                      +|.|.. ||+.|.... .|..|++. |++   +.|..|++.|.   .|..|.+
T Consensus         1 py~C~~-Cgk~F~s~s-~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPI-CGFTTVTLF-ALKQHARRNHTL---TKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCC-CCCccCCHH-HHHHHhhcccCC---CccCCCCCEeC---Chhhhhc
Confidence            478999 999997766 59999874 653   68999999997   4666653

>PHA00616 hypothetical protein

Probab=97.02  E-value=5.5e-05  Score=52.36  Aligned_cols=34  Identities=9%  Similarity=0.195  Sum_probs=23.8

Q ss_pred             ccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      +|.|.. ||+.|.... .+..|.+.|++++++.|++
T Consensus         1 pYqC~~-CG~~F~~~s-~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLR-CGGIFRKKK-EVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccch-hhHHHhhHH-HHHHHHHHhcCCCccceeE
Confidence            466777 777775554 4777777777777777765

>PHA02768 hypothetical protein; Provisional

Probab=96.97  E-value=0.00012  Score=53.00  Aligned_cols=28  Identities=18%  Similarity=0.479  Sum_probs=25.3

Q ss_pred             eeecCCCCcccCCCccccccccccCCCchh
Q 043134           96 VFSCNYCQRKFYSSQALGGHQNAHKRERTL  125 (279)
Q Consensus        96 PfsC~~CgKsFssssaL~~Hqr~HtgERpy  125 (279)
                      -|.|+.||+.|...++|..||++|+  ++|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~   32 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNL   32 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--Ccc
Confidence            3899999999999999999999998  444

>PHA00616 hypothetical protein

Probab=96.97  E-value=0.0002  Score=49.55  Aligned_cols=32  Identities=16%  Similarity=0.343  Sum_probs=29.5

Q ss_pred             eeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           96 VFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        96 PfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      ||+|..||+.|...+.|..|++.|++++++..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            68999999999999999999999999988753

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.38  E-value=0.00035  Score=40.79  Aligned_cols=23  Identities=30%  Similarity=0.700  Sum_probs=14.9

Q ss_pred             eecCCCCcccCCCcccccccccc
Q 043134           97 FSCNYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        97 fsC~~CgKsFssssaL~~Hqr~H  119 (279)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56666777776666666666543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=96.18  E-value=0.0041  Score=61.35  Aligned_cols=52  Identities=25%  Similarity=0.388  Sum_probs=42.5

Q ss_pred             cccCccCCccccCCchhHHHHhhhcC--------CCc-------------------------eeecCCCCcccCCCcccc
Q 043134           67 IDCFKSTDSSQDSLENNDIHRQGNET--------EPR-------------------------VFSCNYCQRKFYSSQALG  113 (279)
Q Consensus        67 f~C~e~CGksFss~ss~L~~Hqr~Ht--------geK-------------------------PfsC~~CgKsFssssaL~  113 (279)
                      |.|.+ |+|.|+.-. +|..|.|=|.        +..                         -|.|.+|+|+|....-|+
T Consensus       296 YrCPE-C~KVFsCPA-NLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLr  373 (500)
T KOG3993|consen  296 YRCPE-CDKVFSCPA-NLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLR  373 (500)
T ss_pred             ecCCc-ccccccCch-hhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHH
Confidence            78999 999996655 5999987762        111                         389999999999999999


Q ss_pred             ccccccC
Q 043134          114 GHQNAHK  120 (279)
Q Consensus       114 ~Hqr~Ht  120 (279)
                      .|+-+|.
T Consensus       374 KHqlthq  380 (500)
T KOG3993|consen  374 KHQLTHQ  380 (500)
T ss_pred             HhHHhhh
Confidence            9988874

>PHA00733 hypothetical protein

Probab=96.16  E-value=0.001  Score=55.61  Aligned_cols=56  Identities=16%  Similarity=0.081  Sum_probs=43.6

Q ss_pred             CCCcCccccCccCCccccCCchhHH------HHhhhcCCCceeecCCCCcccCCCcccccccccc
Q 043134           61 KPELNLIDCFKSTDSSQDSLENNDI------HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        61 ~~e~nlf~C~e~CGksFss~ss~L~------~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~H  119 (279)
                      +++.+.+.|.. |.+.|.... .|.      +|.. +.+.+||.|..|++.|.....|..|+++|
T Consensus        35 ~~~~~~~~~~~-~~~~~~~~~-~l~~~~~l~~~~~-~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h   96 (128)
T PHA00733         35 TPEQKRLIRAV-VKTLIYNPQ-LLDESSYLYKLLT-SKAVSPYVCPLCLMPFSSSVSLKQHIRYT   96 (128)
T ss_pred             ChhhhhHHHHH-HhhhccChh-hhcchHHHHhhcc-cCCCCCccCCCCCCcCCCHHHHHHHHhcC
Confidence            56677889999 998886543 233      3333 34588999999999999999999999876

>PLN03086 PRLI-interacting factor K; Provisional

Probab=96.14  E-value=0.0027  Score=64.94  Aligned_cols=61  Identities=15%  Similarity=0.128  Sum_probs=50.5

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhhcC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQ  130 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr~~  130 (279)
                      -.+.+.|.. |++.|. .. .+..|+.+|+  +++.|. |++.| ....|..|++.|..+|++.++-.
T Consensus       450 l~~H~~C~~-Cgk~f~-~s-~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC  510 (567)
T PLN03086        450 AKNHVHCEK-CGQAFQ-QG-EMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFC  510 (567)
T ss_pred             cccCccCCC-CCCccc-hH-HHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCC
Confidence            356789999 999995 33 4899999874  899999 99765 66899999999999999888753

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=95.93  E-value=0.0013  Score=39.89  Aligned_cols=25  Identities=36%  Similarity=0.691  Sum_probs=19.2

Q ss_pred             eeecCCCCcccCCCccccccccccC
Q 043134           96 VFSCNYCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        96 PfsC~~CgKsFssssaL~~Hqr~Ht  120 (279)
                      ||.|..|++.|....+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5778888888888888888877663

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=95.91  E-value=0.0022  Score=62.07  Aligned_cols=37  Identities=16%  Similarity=0.381  Sum_probs=25.9

Q ss_pred             HHHHhh-hcCCCceeecCCCCcccCCCccccccccccC
Q 043134           84 DIHRQG-NETEPRVFSCNYCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        84 L~~Hqr-~HtgeKPfsC~~CgKsFssssaL~~Hqr~Ht  120 (279)
                      |..|++ .|...|||+|+.|.+.|...+.|..|..+|.
T Consensus       279 L~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS  316 (467)
T KOG3608|consen  279 LTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS  316 (467)
T ss_pred             HHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc
Confidence            445544 2556678888888888887777888777775

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=94.93  E-value=0.0032  Score=36.17  Aligned_cols=23  Identities=35%  Similarity=0.753  Sum_probs=15.7

Q ss_pred             eecCCCCcccCCCcccccccccc
Q 043134           97 FSCNYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        97 fsC~~CgKsFssssaL~~Hqr~H  119 (279)
                      |.|++|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            57888888888888887777654

...

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=94.77  E-value=0.0038  Score=60.47  Aligned_cols=66  Identities=12%  Similarity=0.197  Sum_probs=53.4

Q ss_pred             CCCCCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccc-cCCCchhhhh
Q 043134           59 GSKPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNA-HKRERTLAKR  128 (279)
Q Consensus        59 ~~~~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~-HtgERpy~kr  128 (279)
                      ......|+|.|.. |-|.|.... .|..|++.|..  -|+|+.|.......+.|..|++. |...||++.-
T Consensus       230 qt~l~~n~fqC~~-C~KrFaTek-lL~~Hv~rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd  296 (467)
T KOG3608|consen  230 QTELNTNSFQCAQ-CFKRFATEK-LLKSHVVRHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCD  296 (467)
T ss_pred             hhhhcCCchHHHH-HHHHHhHHH-HHHHHHHHhhh--cccccccccCCCChHHHHHHHHhhhccCCCcccc
Confidence            3456678899999 999996654 58888888764  59999999999999999999885 7778887653

>PLN03086 PRLI-interacting factor K; Provisional

Probab=94.36  E-value=0.019  Score=58.87  Aligned_cols=59  Identities=15%  Similarity=0.320  Sum_probs=46.7

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCC----------CccccccccccCCCchhhhh
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYS----------SQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFss----------ssaL~~Hqr~HtgERpy~kr  128 (279)
                      .++.|.  ||+.+ .+. .|..|+++|..++++.|.+|++.|..          ...|..|..++ +.+++.+.
T Consensus       477 kpv~Cp--Cg~~~-~R~-~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~  545 (567)
T PLN03086        477 EPLQCP--CGVVL-EKE-QMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCD  545 (567)
T ss_pred             CCccCC--CCCCc-chh-HHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEcc
Confidence            567896  99866 443 59999999999999999999999952          23688888875 77777664

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.88  E-value=0.019  Score=33.32  Aligned_cols=23  Identities=17%  Similarity=0.047  Sum_probs=18.8

Q ss_pred             cccCccCCccccCCchhHHHHhhhc
Q 043134           67 IDCFKSTDSSQDSLENNDIHRQGNE   91 (279)
Q Consensus        67 f~C~e~CGksFss~ss~L~~Hqr~H   91 (279)
                      |.|.. |++.|.... .|..|++.|
T Consensus         1 y~C~~-C~~~f~~~~-~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPI-CGKSFSSKS-NLKRHMRRH   23 (23)
T ss_dssp             EEETT-TTEEESSHH-HHHHHHHHH
T ss_pred             CCCCC-CCCccCCHH-HHHHHHhHC
Confidence            57999 999997766 599998764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>smart00355 ZnF_C2H2 zinc finger

Probab=93.87  E-value=0.0093  Score=34.42  Aligned_cols=23  Identities=35%  Similarity=0.697  Sum_probs=13.7

Q ss_pred             eecCCCCcccCCCcccccccccc
Q 043134           97 FSCNYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        97 fsC~~CgKsFssssaL~~Hqr~H  119 (279)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            35666666666666666665544

>PRK04860 hypothetical protein; Provisional

Probab=93.65  E-value=0.043  Score=47.73  Aligned_cols=39  Identities=15%  Similarity=0.224  Sum_probs=31.6

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSS  109 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFsss  109 (279)
                      -+|.| . |++..   . .+.+|.++|+++++|.|..|++.|...
T Consensus       118 ~~Y~C-~-C~~~~---~-~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRC-K-CQEHQ---L-TVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEc-C-CCCee---C-HHHHHHHHhcCCccEECCCCCceeEEe
Confidence            36889 5 88722   2 489999999999999999999998643

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=92.26  E-value=0.061  Score=38.08  Aligned_cols=49  Identities=12%  Similarity=0.212  Sum_probs=35.4

Q ss_pred             ccccCccCCccccCCchhHHHHh-hhcCCC-ceeecCCCCcccCCCcccccccccc
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQ-GNETEP-RVFSCNYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hq-r~Htge-KPfsC~~CgKsFssssaL~~Hqr~H  119 (279)
                      -|.|.- |++.|. .. .|..|. ..|..+ +.+.|+.|...+.  ..|..|++.+
T Consensus         2 ~f~CP~-C~~~~~-~~-~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCPY-CGKGFS-ES-SLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CcCCCC-CCCccC-HH-HHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHh
Confidence            478999 999774 33 488884 446554 5799999998755  3787887654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=92.24  E-value=0.067  Score=49.68  Aligned_cols=50  Identities=26%  Similarity=0.485  Sum_probs=37.8

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCcccccc-ccccC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGH-QNAHK  120 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~H-qr~Ht  120 (279)
                      .+++ |.- |++.|.... .|.+|++    .|-|+|..|.|++.+--.|..| |++|+
T Consensus         9 ~kpw-cwy-cnrefddek-iliqhqk----akhfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen    9 DKPW-CWY-CNREFDDEK-ILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             CCce-eee-cccccchhh-hhhhhhh----hccceeeeehhhhccCCCceeehhhhhh
Confidence            4455 999 999996654 4777765    4779999999998887777777 45554

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.90  E-value=0.12  Score=47.81  Aligned_cols=62  Identities=19%  Similarity=0.222  Sum_probs=53.6

Q ss_pred             CccccCccCCccccCCchhHHHHhh--hcCCC--ceeecC--CCCcccCCCccccccccccCCCchhhhh
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQG--NETEP--RVFSCN--YCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr--~Htge--KPfsC~--~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..+.|.. |...|.... .+..|.+  .|+++  +++.|.  .|++.|.....+..|...|..-++....
T Consensus       288 ~~~~~~~-~~~~~s~~~-~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         288 LPIKSKQ-CNISFSRSS-PLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             cCCCCcc-ccCCccccc-cccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            4688999 999996665 5899999  89999  999999  7999999999999999999877655444

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=91.61  E-value=0.077  Score=31.88  Aligned_cols=25  Identities=12%  Similarity=0.145  Sum_probs=20.4

Q ss_pred             ccccCccCCccccCCchhHHHHhhhcC
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQGNET   92 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hqr~Ht   92 (279)
                      +|.|.. |++.|.... .|..|++.|.
T Consensus         1 ~~~C~~-C~~~F~~~~-~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDE-CGKTFSSLS-ALREHKRSHC   25 (27)
T ss_dssp             SEEETT-TTEEESSHH-HHHHHHCTTT
T ss_pred             CCCCCc-cCCccCChh-HHHHHhHHhc
Confidence            578999 999997665 5999988764

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=91.53  E-value=0.035  Score=42.21  Aligned_cols=24  Identities=38%  Similarity=0.829  Sum_probs=21.2

Q ss_pred             eeecCCCCcccCCCcccccccccc
Q 043134           96 VFSCNYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        96 PfsC~~CgKsFssssaL~~Hqr~H  119 (279)
                      .+.|..|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            599999999999999999999864

>PHA00732 hypothetical protein

Probab=90.50  E-value=0.082  Score=40.78  Aligned_cols=26  Identities=27%  Similarity=0.427  Sum_probs=23.2

Q ss_pred             eeecCCCCcccCCCccccccccc-cCC
Q 043134           96 VFSCNYCQRKFYSSQALGGHQNA-HKR  121 (279)
Q Consensus        96 PfsC~~CgKsFssssaL~~Hqr~-Htg  121 (279)
                      ||.|..|++.|.+...|..|++. |++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~   27 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL   27 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC
Confidence            68999999999999999999984 654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=90.47  E-value=0.054  Score=38.86  Aligned_cols=34  Identities=15%  Similarity=0.278  Sum_probs=22.0

Q ss_pred             cCCCceeecCCCCcccCCCccccccccccCCCch
Q 043134           91 ETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERT  124 (279)
Q Consensus        91 HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERp  124 (279)
                      +..++|..|+.|+..+.+..+|.+|+.++.+.||
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            4467889999999999999999999876655443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=90.07  E-value=0.09  Score=31.96  Aligned_cols=22  Identities=32%  Similarity=0.703  Sum_probs=18.8

Q ss_pred             eecCCCCcccCCCccccccccc
Q 043134           97 FSCNYCQRKFYSSQALGGHQNA  118 (279)
Q Consensus        97 fsC~~CgKsFssssaL~~Hqr~  118 (279)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6799999999999999888864

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=89.88  E-value=0.039  Score=32.60  Aligned_cols=23  Identities=30%  Similarity=0.736  Sum_probs=16.3

Q ss_pred             eecCCCCcccCCCcccccccccc
Q 043134           97 FSCNYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        97 fsC~~CgKsFssssaL~~Hqr~H  119 (279)
                      |.|..|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56777777777777777776543

>smart00355 ZnF_C2H2 zinc finger

Probab=88.42  E-value=0.28  Score=27.95  Aligned_cols=24  Identities=8%  Similarity=-0.071  Sum_probs=19.1

Q ss_pred             cccCccCCccccCCchhHHHHhhhcC
Q 043134           67 IDCFKSTDSSQDSLENNDIHRQGNET   92 (279)
Q Consensus        67 f~C~e~CGksFss~ss~L~~Hqr~Ht   92 (279)
                      |.|.. |++.|.... .+..|++.|.
T Consensus         1 ~~C~~-C~~~f~~~~-~l~~H~~~H~   24 (26)
T smart00355        1 YRCPE-CGKVFKSKS-ALKEHMRTHX   24 (26)
T ss_pred             CCCCC-CcchhCCHH-HHHHHHHHhc
Confidence            56999 999997665 5889988664

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=87.75  E-value=0.38  Score=46.42  Aligned_cols=53  Identities=9%  Similarity=0.230  Sum_probs=40.0

Q ss_pred             cCccccCc-cCCccccCCchhHHHHhhh-c------------------CCCceeecCCCCcccCCCcccccccc
Q 043134           64 LNLIDCFK-STDSSQDSLENNDIHRQGN-E------------------TEPRVFSCNYCQRKFYSSQALGGHQN  117 (279)
Q Consensus        64 ~nlf~C~e-~CGksFss~ss~L~~Hqr~-H------------------tgeKPfsC~~CgKsFssssaL~~Hqr  117 (279)
                      .++|+|.. .|.|.+.+.. .|+-|+.. |                  ...|||.|.+|+|.+..-..|+-|+.
T Consensus       347 ~KpykCpV~gC~K~Yknqn-GLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQN-GLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhcccc-chhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            48999984 2999997654 57777432 2                  12489999999999999999988853

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=87.64  E-value=0.12  Score=51.39  Aligned_cols=55  Identities=15%  Similarity=0.198  Sum_probs=42.0

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKR  121 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~Htg  121 (279)
                      .-|.|.- |-..|..-- .|.+|.-.-.-.--|.|.+|+|.|+...+|..|+|-|+-
T Consensus       266 GdyiCqL-CK~kYeD~F-~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKP  320 (500)
T KOG3993|consen  266 GDYICQL-CKEKYEDAF-ALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKP  320 (500)
T ss_pred             HHHHHHH-HHHhhhhHH-HHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCC
Confidence            3488999 988775443 478885332233459999999999999999999998863

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=87.13  E-value=0.23  Score=28.09  Aligned_cols=23  Identities=13%  Similarity=0.031  Sum_probs=16.7

Q ss_pred             cccCccCCccccCCchhHHHHhhhc
Q 043134           67 IDCFKSTDSSQDSLENNDIHRQGNE   91 (279)
Q Consensus        67 f~C~e~CGksFss~ss~L~~Hqr~H   91 (279)
                      |.|.. |++.|.... .+..|++.|
T Consensus         1 ~~C~~-C~~~~~~~~-~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPI-CGKSFRSKS-ELRQHMRTH   23 (24)
T ss_dssp             EE-SS-TS-EESSHH-HHHHHHHHH
T ss_pred             CCCcC-CCCcCCcHH-HHHHHHHhh
Confidence            57999 999997766 588998765

...

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=81.96  E-value=0.8  Score=42.81  Aligned_cols=58  Identities=16%  Similarity=0.273  Sum_probs=42.7

Q ss_pred             ccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .|+|.. ||.+-.- . .+..|+...++ .-|+|-.|++.|.. .....|...-+...-|.+.
T Consensus         3 ~FtCnv-CgEsvKK-p-~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCITEaQKYg~~   60 (276)
T KOG2186|consen    3 FFTCNV-CGESVKK-P-QVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCITEAQKYGKK   60 (276)
T ss_pred             EEehhh-hhhhccc-c-chHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcchHHHhhhh
Confidence            478999 9998743 3 37889877766 67999999999987 6677776655544444444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	279
2l1o_A	39	Zinc To Cadmium Replacement In The A. Thaliana Supe		5e-04

>pdb|2L1O|A Chain A, Zinc To Cadmium Replacement In The A. Thaliana Superman Cys2his2 Zinc Finger Induces Structural Rearrangements Of Typical Dna Base Determinant Positions Length = 39

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 94  PRVFSCNYCQRKFYSSQALGGHQNAH 119
           PR ++C++C+R+F S+QALGGH N H
Sbjct: 4   PRSYTCSFCKREFRSAQALGGHMNVH 29

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	279
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	3e-18

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 75.2 bits (185), Expect = 3e-18
 Identities = 17/34 (50%), Positives = 27/34 (79%)

Query: 94  PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 127
           PR ++C++C+R+F S+QALGGH N H+R+R   +
Sbjct: 4   PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	279
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.51
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.32
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.29
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.19
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.17
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.16
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.15
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.09
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.09
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.04
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.03
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.99
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.98
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	98.97
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.96
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	98.94
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.93
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.93
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.91
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.91
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.91
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.9
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.9
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.89
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.89
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.89
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.88
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.88
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.85
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.85
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.81
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.81
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.79
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.77
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.77
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.77
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.77
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.76
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.76
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.76
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.76
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.75
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.75
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.75
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.75
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.75
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.74
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.74
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.74
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.73
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.72
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.72
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.72
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.72
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.72
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.72
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.71
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.71
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.71
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.7
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.7
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.7
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.7
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.7
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.7
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.7
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.69
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.69
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.69
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.69
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.69
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.68
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.68
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.68
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.68
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.68
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.67
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.67
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.67
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.67
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.67
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.66
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.66
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.66
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.66
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.65
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.65
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.65
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.65
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.64
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.64
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.62
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.61
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.61
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.61
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.61
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.61
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.6
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.59
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.58
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.58
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.57
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.56
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.55
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.54
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.54
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.51
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.48
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.45
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.45
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.42
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.4
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.4
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.4
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.38
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.37
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.34
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.34
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	98.34
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.34
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.34
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.33
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.33
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.32
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.32
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.32
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.32
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.32
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.32
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.31
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.31
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.31
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.31
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.31
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.3
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.3
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.3
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.29
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.29
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.29
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.29
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.29
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.29
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.29
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.28
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.28
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.28
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.28
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.28
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.27
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.27
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.27
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.27
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.27
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.27
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.27
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.27
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.26
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.26
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.26
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.26
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.24
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.24
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.24
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.24
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.24
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.23
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.23
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.23
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.22
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.22
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.21
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.21
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.21
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.21
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.2
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.15
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.12
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.09
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.07
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.34
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.06
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.05
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.31
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.03
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.03
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.03
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.03
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.02
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.02
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.02
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.02
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.02
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.02
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.01
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.01
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.0
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.0
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.0
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.0
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.0
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.0
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.99
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.98
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	97.98
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	97.98
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.97
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.97
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	97.97
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.97
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.97
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.97
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.96
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.96
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	97.96
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	97.96
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	97.96
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	97.95
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	97.95
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.95
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.94
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.94
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.93
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	97.93
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.92
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.92
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.91
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.9
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.9
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.9
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.89
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.88
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	97.87
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.87
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.87
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.86
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.86
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.86
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	97.86
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.86
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	97.85
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.85
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.84
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	97.84
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.81
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.8
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.78
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.76
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	97.75
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.75
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.75
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	97.73
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.91
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	97.71
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.71
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.7
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	97.61
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.61
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	97.6
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	97.56
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	97.55
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	97.55
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.53
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	97.47
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.34
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	97.32
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.29
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.28
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.26
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	97.23
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.22
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	97.2
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.17
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	97.17
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.11
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.09
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.08
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.08
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.07
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.06
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.04
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.04
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.03
2epa_A	72	Krueppel-like factor 10; transforming growth facto	97.02
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.0
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.0
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.99
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.95
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.01
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.94
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	95.94
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	96.88
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	96.88
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.88
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	96.86
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	96.82
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	96.74
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	96.66
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.6
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	96.59
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	96.56
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	96.46
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	96.44
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	95.28
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.26
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	96.25
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	96.18
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.07
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.73
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	92.32
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	88.96
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	83.54

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.51  E-value=1.6e-15  Score=109.22  Aligned_cols=58  Identities=14%  Similarity=0.161  Sum_probs=53.5

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCc
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +++|.|.+ ||+.|.... .|..|+++|++++||.|.+|++.|.....|..|+++|++|+
T Consensus         2 EKpy~C~~-C~k~F~~~~-~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNF-CGKTYRDAS-GLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTT-TCCEESSHH-HHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCC-CCCEeCCHH-HHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            47899999 999996665 59999999999999999999999999999999999999985

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.32  E-value=2.2e-13  Score=98.53  Aligned_cols=62  Identities=19%  Similarity=0.293  Sum_probs=56.7

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchh
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL  125 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy  125 (279)
                      ...++|.|.. |++.|.... .|..|+++|+++++|.|..|++.|.....|..|+++|++++||
T Consensus        13 ~~~~~~~C~~-C~k~f~~~~-~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDR-CQASFRYKG-NLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTT-SSCCBSCHH-HHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCC-CCceeCCHH-HHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3457899999 999997665 5999999999999999999999999999999999999999986

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.1e-12  Score=95.50  Aligned_cols=63  Identities=17%  Similarity=0.304  Sum_probs=57.8

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      ...++|.|.. |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|+++|++++||.
T Consensus        14 ~~~~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           14 RERRRYKCDE-CGKSFSHSS-DLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             CCSCSSBCSS-SCCBCSCHH-HHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             CCCCCEECCC-CCcccCCHH-HHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            4467899999 999996655 59999999999999999999999999999999999999999885

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=2.3e-12  Score=92.11  Aligned_cols=62  Identities=18%  Similarity=0.187  Sum_probs=56.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      ..++|.|.. |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|+++|.+++|..
T Consensus         6 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            6 SGHPEKCSE-CSYSCSSKA-ALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCSEECSS-SSCEESSHH-HHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCeECCC-CCcccCCHH-HHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            457899999 999997665 59999999999999999999999999999999999999987654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=5.4e-12  Score=99.69  Aligned_cols=67  Identities=15%  Similarity=0.090  Sum_probs=59.1

Q ss_pred             CCCcCccccCccCCccccCCchhHHHHhh-hc---CCCceeecCCCCcccCCCcccccc-ccccCCCchhhhhc
Q 043134           61 KPELNLIDCFKSTDSSQDSLENNDIHRQG-NE---TEPRVFSCNYCQRKFYSSQALGGH-QNAHKRERTLAKRG  129 (279)
Q Consensus        61 ~~e~nlf~C~e~CGksFss~ss~L~~Hqr-~H---tgeKPfsC~~CgKsFssssaL~~H-qr~HtgERpy~kr~  129 (279)
                      +...++|.|.. |++.|.... .|..|++ +|   ++++||.|.+|++.|.....|..| +++|++|+||....
T Consensus        13 ~~gekpy~C~~-Cgk~F~~~~-~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           13 KKVEGGYECKY-CTFQTPDLN-MFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCCSSEECSS-CSCEESCHH-HHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             CCCCcCcCCCC-CCCccCCHH-HHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            45567899999 999997665 5999997 59   678999999999999999999999 89999999998764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.16  E-value=5.6e-12  Score=86.10  Aligned_cols=56  Identities=16%  Similarity=0.281  Sum_probs=51.6

Q ss_pred             ccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCc
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +|.|.. |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|+++|.+++
T Consensus         1 p~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEE-CGIRXKKPS-MLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTT-TCCBCSSHH-HHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCC-CcCcCCCHH-HHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            578999 999997665 59999999999999999999999999999999999998875

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.15  E-value=8.8e-12  Score=95.40  Aligned_cols=60  Identities=27%  Similarity=0.372  Sum_probs=53.6

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccc-cccCCCc
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQ-NAHKRER  123 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hq-r~HtgER  123 (279)
                      ...+.|.|.. ||+.|.... .|..|+++|++++||.|.+|++.|.....|..|+ ++|++|+
T Consensus        24 ~~~~~h~C~~-Cgk~F~~~~-~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           24 ASAECHLCPV-CGESFASKG-AQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCTTEECTT-SCCEESSHH-HHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCEECCC-CCCCcCcHH-HHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            3456799999 999997665 5999999999999999999999999999999995 7898874

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=5.2e-12  Score=96.85  Aligned_cols=64  Identities=14%  Similarity=0.194  Sum_probs=57.2

Q ss_pred             cCccccCccCCcccc-CCchhHHHHhhhcCC-CceeecCCCCcccCCCccccccccccCCCchhhhhc
Q 043134           64 LNLIDCFKSTDSSQD-SLENNDIHRQGNETE-PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRG  129 (279)
Q Consensus        64 ~nlf~C~e~CGksFs-s~ss~L~~Hqr~Htg-eKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr~  129 (279)
                      .++|.|.. |++.|. ... .|..|+++|++ +++|.|.+|++.|.....|..|+++|++++|+....
T Consensus        22 ~~~~~C~~-C~k~f~~~~~-~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~~   87 (98)
T 2gqj_A           22 RGEAVCPT-CNVVTRKTLV-GLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAEA   87 (98)
T ss_dssp             TSCCCCTT-TCCCCSSCSH-HHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCCC
T ss_pred             CCCcCCCC-CCCChhhhHH-HHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            46799999 999997 655 59999999999 999999999999999999999999999998865443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.09  E-value=1.2e-11  Score=88.99  Aligned_cols=60  Identities=17%  Similarity=0.264  Sum_probs=54.1

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCc
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      ...++|.|.. |++.|.... .|..|+++|++++||.|.+|++.|.....|..|+++|+++.
T Consensus        10 ~~~k~~~C~~-C~k~f~~~~-~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           10 SGEKPYGCVE-CGKAFSRSS-ILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTCCCEECSS-SCCEESSHH-HHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCccCCC-CCCccCCHH-HHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3457899999 999997665 59999999999999999999999999999999999998764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.09  E-value=4.7e-12  Score=103.66  Aligned_cols=63  Identities=17%  Similarity=0.221  Sum_probs=56.6

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .++|.|.. |++.|.... .|..|+++|++++||.|++|++.|.....|..|+++|++++||...
T Consensus        20 ek~y~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   82 (133)
T 2lt7_A           20 RVYYICIV-CKRSYVCLT-SLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCL   82 (133)
T ss_dssp             EEEEEETT-TCCEESCHH-HHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEES
T ss_pred             CcCeECCC-CCCCcCCHH-HHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCC
Confidence            46899999 999996665 5999999999999999999999999999999999999999888654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.06  E-value=1.4e-11  Score=84.05  Aligned_cols=55  Identities=15%  Similarity=0.157  Sum_probs=48.4

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~Ht  120 (279)
                      .++|.|.. |++.|.... .|..|+++|++++||.|.+|++.|.....|..|+++|.
T Consensus         2 ~~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSY-CGKFFRSNY-YLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTT-TCCBCSCHH-HHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCC-CcchhCChH-HHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            35799999 999996665 59999999999999999999999999999999998875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.06  E-value=3.6e-11  Score=82.99  Aligned_cols=56  Identities=18%  Similarity=0.292  Sum_probs=50.7

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccc-cccCCC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQ-NAHKRE  122 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hq-r~HtgE  122 (279)
                      ++|.|.. |++.|.... .|..|+++|++++||.|..|++.|.....|..|+ ++|+++
T Consensus         1 k~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEV-CTRAFARQE-HLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTT-TCCCBSCHH-HHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCC-CccccCCHH-HHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            3689999 999996665 5999999999999999999999999999999995 789875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.04  E-value=3.8e-11  Score=91.63  Aligned_cols=60  Identities=15%  Similarity=0.272  Sum_probs=42.2

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      ++|.|.. |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|+++|.++++|.
T Consensus        44 ~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  103 (106)
T 2ee8_A           44 RPYTCDI-CHKAFRRQD-HLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT  103 (106)
T ss_dssp             CCCBCSS-SCCBCSCHH-HHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCC
T ss_pred             CCcCCCC-ccchhCCHH-HHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCc
Confidence            4567777 777775444 47777777777777777777777777777777777777776653

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.03  E-value=3.3e-11  Score=93.10  Aligned_cols=57  Identities=16%  Similarity=0.307  Sum_probs=51.6

Q ss_pred             cCccccCccCCccc-cCCchhHHHHhhhcCCCceeecCCCCcccCCCcccccc-ccccCCCc
Q 043134           64 LNLIDCFKSTDSSQ-DSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGH-QNAHKRER  123 (279)
Q Consensus        64 ~nlf~C~e~CGksF-ss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~H-qr~HtgER  123 (279)
                      .++|.|.. |++.| .... .|..|+++| +++||.|.+|++.|.....|..| +++|+++.
T Consensus        32 ~~~~~C~~-C~k~F~~~~~-~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p   90 (96)
T 2ctd_A           32 KGSVSCPT-CQAVGRKTIE-GLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP   90 (96)
T ss_dssp             TSCEECTT-TCSCEESSHH-HHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCS
T ss_pred             CCCcCCCC-CCCCcccCHH-HHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCC
Confidence            35799999 99999 8776 499999999 99999999999999999999999 99998653

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.99  E-value=1e-10  Score=87.46  Aligned_cols=64  Identities=16%  Similarity=0.199  Sum_probs=55.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..++|.|.. |++.|.... .|..|+++|.++++|.|..|++.|.....|..|+++|.++++|...
T Consensus         5 ~~~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   68 (96)
T 2dmd_A            5 SSGPHKCEV-CGKCFSRKD-KLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ   68 (96)
T ss_dssp             CCCCCCBTT-TTBCCCCHH-HHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECS
T ss_pred             CCcCeECCC-CCCccCCHH-HHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCC
Confidence            456799999 999996655 5999999999999999999999999999999999999888776643

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=6.3e-11  Score=86.09  Aligned_cols=62  Identities=15%  Similarity=0.276  Sum_probs=54.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCC---CceeecCCCCcccCCCccccccc-cccCCCchhh
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETE---PRVFSCNYCQRKFYSSQALGGHQ-NAHKRERTLA  126 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~Htg---eKPfsC~~CgKsFssssaL~~Hq-r~HtgERpy~  126 (279)
                      ..++|.|.. |++.|.... .|..|+++|++   +++|.|.+|++.|.....|..|+ +.|.++++..
T Consensus         4 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~   69 (78)
T 2d9h_A            4 GSSGLQCEI-CGFTCRQKA-SLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP   69 (78)
T ss_dssp             SCCCEECSS-SCCEESSHH-HHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCC
T ss_pred             CCcCeECCC-CCCeeCCHH-HHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCc
Confidence            357899999 999997665 59999999986   89999999999999999999999 6788776654

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=98.97  E-value=2.5e-10  Score=87.06  Aligned_cols=65  Identities=17%  Similarity=0.326  Sum_probs=57.8

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ...++|.|.. |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|+++|.++++|...
T Consensus        13 ~~~~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   77 (106)
T 2ee8_A           13 KTKKEFICKF-CGRHFTKSY-NLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ   77 (106)
T ss_dssp             CCCCCCBCSS-SCCBCSSHH-HHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCS
T ss_pred             CCCcCeECCC-CCCccCCHH-HHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECC
Confidence            3456899999 999997665 5999999999999999999999999999999999999998877643

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.96  E-value=7.8e-11  Score=86.93  Aligned_cols=57  Identities=21%  Similarity=0.358  Sum_probs=43.4

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      ++|.|.. |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|+++|++++
T Consensus        33 ~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           33 KPFQCRI-CMRNFSRSD-HLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCEECTT-TCCEESCHH-HHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCccCCC-CCcccCCHH-HHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            4677888 888885554 47888888888888888888888888888888888887765

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=98.94  E-value=9.7e-11  Score=95.78  Aligned_cols=61  Identities=15%  Similarity=0.215  Sum_probs=55.5

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      .++|.|.. |++.|.... .|..|+++|++++||.|++|++.|.....|..|+++|.+++|+.
T Consensus        48 ~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~  108 (133)
T 2lt7_A           48 EKKYPCRY-CEKVFPLAE-YRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSG  108 (133)
T ss_dssp             CSCEECSS-SSCEESSHH-HHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTS
T ss_pred             CCCeeCCc-cCeeccccc-chhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCC
Confidence            46899999 999997665 59999999999999999999999999999999999998887754

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.3e-10  Score=81.11  Aligned_cols=57  Identities=12%  Similarity=0.086  Sum_probs=51.5

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecC-CCCcccCCCccccccccccCCCch
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN-YCQRKFYSSQALGGHQNAHKRERT  124 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~-~CgKsFssssaL~~Hqr~HtgERp  124 (279)
                      .++|.|.. |++.|. . ..|..|+++ ++++||.|. +|++.|.....|..|+++|..+++
T Consensus         8 ~~~~~C~~-C~k~f~-~-~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            8 KRTQPCTY-CTKEFV-F-DTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCEEECSS-SCCEEE-H-HHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCeeccc-cCCccC-H-HHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            46899999 999997 4 469999999 999999999 999999999999999999987654

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.93  E-value=2.3e-10  Score=85.40  Aligned_cols=62  Identities=11%  Similarity=0.202  Sum_probs=54.7

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCC--chhh
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE--RTLA  126 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE--Rpy~  126 (279)
                      ..++|.|.. |++.|.... .|..|+++|+++++|.|..|++.|.....|..|+++|.++  ++|.
T Consensus         4 ~~~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   67 (95)
T 2yt9_A            4 GSSGVACEI-CGKIFRDVY-HLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI   67 (95)
T ss_dssp             CCSCEECSS-SCCEESSSH-HHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBC
T ss_pred             CCCCeECCC-CCCccCChH-HHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceE
Confidence            456899999 999997766 5999999999999999999999999999999999999876  5544

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.91  E-value=1.1e-10  Score=87.28  Aligned_cols=59  Identities=12%  Similarity=0.071  Sum_probs=53.6

Q ss_pred             cccCccCCccccCCchhHHHHhhh-cCCCce--------eecCCCCcccCCCccccccccccCCCchhhh
Q 043134           67 IDCFKSTDSSQDSLENNDIHRQGN-ETEPRV--------FSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        67 f~C~e~CGksFss~ss~L~~Hqr~-HtgeKP--------fsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +.|.. |++.|.... .|..|+++ |+++++        |.|.+|++.|.....|..|+++|++++||..
T Consensus        26 ~~C~~-C~k~f~~~~-~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           26 RPKKS-CDRTFSTMH-ELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSCCC-CCCCCSSHH-HHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             Ccccc-cccccCCHH-HHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            56999 999997665 59999998 999888        9999999999999999999999999999864

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.91  E-value=2.6e-10  Score=85.28  Aligned_cols=59  Identities=17%  Similarity=0.255  Sum_probs=53.7

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCch
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERT  124 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERp  124 (279)
                      .++|.|.. |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|+++|+++++
T Consensus        34 ~~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           34 VKPYKCKT-CDYAAADSS-SLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             CCSEECSS-SCCEESSHH-HHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             CCCEeCCC-CCCccCCHH-HHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            35799999 999997655 599999999999999999999999999999999999998764

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.91  E-value=7.9e-11  Score=80.56  Aligned_cols=52  Identities=10%  Similarity=0.118  Sum_probs=45.9

Q ss_pred             CccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           74 DSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        74 GksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      ++.|.... .|..|+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~-~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPP-GTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSS-CCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCc-chhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            45665554 48889999999999999999999999999999999999999874

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.90  E-value=2.8e-10  Score=87.50  Aligned_cols=63  Identities=19%  Similarity=0.289  Sum_probs=53.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..++|.| . |++.|.... .|..|++.|.++++|.|.+|++.|.....|..|+++|.++++|...
T Consensus         7 ~~k~~~C-~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   69 (110)
T 2csh_A            7 GDKLYPC-Q-CGKSFTHKS-QRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN   69 (110)
T ss_dssp             CCCCEEC-T-TSCEESSHH-HHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECS
T ss_pred             CCCCEec-c-CCCccCCHH-HHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCC
Confidence            4567899 8 999996655 5899999999999999999999999999999999999888776543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.90  E-value=1.8e-10  Score=80.89  Aligned_cols=56  Identities=13%  Similarity=0.300  Sum_probs=49.8

Q ss_pred             cCccccCccCCccccCCchhHHHHhhh-c-CCCceeecCCCCcccCCCccccccccccCC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGN-E-TEPRVFSCNYCQRKFYSSQALGGHQNAHKR  121 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~-H-tgeKPfsC~~CgKsFssssaL~~Hqr~Htg  121 (279)
                      .++|.|.. |++.|.... .|..|++. | ++++||.|..|++.|.....|..|+++|.+
T Consensus         8 ~k~~~C~~-C~k~f~~~~-~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCKV-CSRVYTHIS-NFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECTT-TCCEESSHH-HHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECCC-CcchhCCHH-HHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            46899999 999997665 59999988 7 699999999999999999999999988754

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.89  E-value=2.1e-10  Score=82.12  Aligned_cols=57  Identities=23%  Similarity=0.396  Sum_probs=51.1

Q ss_pred             CCcCccccC--ccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccC
Q 043134           62 PELNLIDCF--KSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        62 ~e~nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~Ht  120 (279)
                      ...++|.|.  . |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|+++|+
T Consensus        15 ~~~~~~~C~~~~-C~k~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           15 PKMRPYACPVES-CDRRFSRSD-ELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCEECSSTT-BCCEESSHH-HHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCccCCcCCC-CCCccCCHH-HHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            445789996  7 999997665 59999999999999999999999999999999999885

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.89  E-value=2.3e-10  Score=82.80  Aligned_cols=62  Identities=18%  Similarity=0.266  Sum_probs=54.6

Q ss_pred             CccccC--ccCCccccCCchhHHHHhh-hcCCCceeecCC--CCcccCCCccccccccccCCCchhhhh
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQG-NETEPRVFSCNY--CQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr-~HtgeKPfsC~~--CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ++|.|.  . |++.|.... .|..|++ .|+++++|.|.+  |++.|.....|..|+++|+++++|...
T Consensus         6 ~~~~C~~~~-C~~~f~~~~-~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   72 (79)
T 2dlk_A            6 SGMPCDFPG-CGRIFSNRQ-YLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   72 (79)
T ss_dssp             SSEECSSTT-TCCEESSHH-HHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCccCCCCC-CcCccCCHH-HHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC
Confidence            456666  7 999997665 5999998 799999999999  999999999999999999999988654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.89  E-value=1.2e-10  Score=84.31  Aligned_cols=61  Identities=18%  Similarity=0.319  Sum_probs=47.3

Q ss_pred             ccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      +|.|.. |++.|.... .|..|+++|.++++|.|..|++.|.....|..|+++|.++++|...
T Consensus         1 ~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   61 (82)
T 2kmk_A            1 SFDCKI-CGKSFKRSS-TLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ   61 (82)
T ss_dssp             CEECSS-SCCEESSHH-HHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECT
T ss_pred             CccCCC-CcccccCch-hHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCC
Confidence            467888 888886554 4788888888888888888888888888888888888777766543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.88  E-value=2e-10  Score=96.46  Aligned_cols=61  Identities=21%  Similarity=0.336  Sum_probs=38.0

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      ++|.|.. |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus       104 ~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  164 (190)
T 2i13_A          104 KPYACPE-CGKSFSQLA-HLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKC  164 (190)
T ss_dssp             CCEECTT-TCCEESSHH-HHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEEC
T ss_pred             CCCcCCC-CCCccCCHH-HHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeEC
Confidence            4566666 666664443 366666666666666666666666666666666666666666554

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.88  E-value=3.1e-10  Score=82.96  Aligned_cols=64  Identities=13%  Similarity=0.210  Sum_probs=55.7

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCC----ceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEP----RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~Htge----KPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..++|.|.. |++.|.... .|..|++.|..+    ++|.|..|++.|.....|..|+++|.+++++...
T Consensus        12 ~~k~~~C~~-C~~~f~~~~-~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~   79 (86)
T 1x6h_A           12 GEKPYACSH-CDKTFRQKQ-LLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGE   79 (86)
T ss_dssp             CCCCEECSS-SSCEESSHH-HHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred             CCCCCcCCC-CCCccCCHH-HHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccC
Confidence            457899999 999997665 599998877665    7999999999999999999999999999887654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.85  E-value=2.3e-10  Score=87.96  Aligned_cols=60  Identities=23%  Similarity=0.248  Sum_probs=49.9

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCcccccccc-ccCCCchhhh
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQN-AHKRERTLAK  127 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr-~HtgERpy~k  127 (279)
                      ++|.|.. |++.|.... .|..|++ |++++||.|.+|++.|.....|..|++ +|+++++|..
T Consensus        41 ~~~~C~~-C~~~f~~~~-~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           41 NAAVCPY-CSLRFFSPE-LKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HSBCCTT-TCCCBSSHH-HHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             CCccCCC-CCCccCCHH-HHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            4688999 999996654 5888885 889999999999999999999999986 8888887754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.85  E-value=2.7e-10  Score=82.40  Aligned_cols=56  Identities=16%  Similarity=0.189  Sum_probs=50.5

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKR  121 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~Htg  121 (279)
                      .++|.|.. |++.|.... .|..|+++|+++++|.|..|++.|.....|..|+++|+|
T Consensus        27 ~~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           27 TRPYPCQY-CGKRFHQKS-DMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CCCEECSS-SCCEESSHH-HHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCeeCCc-CChhhCCHH-HHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            35799999 999997665 599999999999999999999999999999999999875

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=5.5e-10  Score=71.59  Aligned_cols=40  Identities=18%  Similarity=0.380  Sum_probs=37.6

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            6788999999999999999999999999999999999875

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.81  E-value=3.3e-10  Score=83.56  Aligned_cols=62  Identities=23%  Similarity=0.321  Sum_probs=55.7

Q ss_pred             CccccC--ccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ++|.|.  . |++.|.... .|..|+++|+++++|.|..|++.|.....|..|+++|.++++|...
T Consensus         3 k~~~C~~~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   66 (90)
T 1a1h_A            3 RPYACPVES-CDRRFSQSG-SLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD   66 (90)
T ss_dssp             CCEECCSSS-CCCEESSHH-HHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             CceECCCCC-CCCccCCHH-HHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCC
Confidence            578997  7 999997665 5999999999999999999999999999999999999998877643

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.79  E-value=9.9e-10  Score=79.64  Aligned_cols=60  Identities=17%  Similarity=0.218  Sum_probs=50.6

Q ss_pred             CcCccccCccCCccccCCchhHHHHhh-hcCCC-ceeecCCCCcccCCCccccccccc-cCCCch
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQG-NETEP-RVFSCNYCQRKFYSSQALGGHQNA-HKRERT  124 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr-~Htge-KPfsC~~CgKsFssssaL~~Hqr~-HtgERp  124 (279)
                      ..++|.|.. |++.|.... .|..|++ .|+++ ++|.|.+|++.|.....|..|++. |..++|
T Consensus        12 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           12 GEKPYECYI-CHARFTQSG-TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCSEECTT-TCCEESCHH-HHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCCCeECCC-cCchhCCHH-HHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            457899999 999997665 5999986 78875 899999999999999999999986 444444

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.77  E-value=6.8e-10  Score=71.31  Aligned_cols=40  Identities=20%  Similarity=0.402  Sum_probs=36.0

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPS   40 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCC
Confidence            5678999999999999999999999999999999998875

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.77  E-value=8.5e-10  Score=70.02  Aligned_cols=39  Identities=44%  Similarity=0.924  Sum_probs=35.0

Q ss_pred             cCCCceeecCCCCcccCCCccccccccccCCCchhhhhc
Q 043134           91 ETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRG  129 (279)
Q Consensus        91 HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr~  129 (279)
                      |++++||.|.+|++.|.....|..|+++|+++++|.+++
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~~   39 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLX   39 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC-
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceecC
Confidence            578899999999999999999999999999999998763

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.77  E-value=6.8e-10  Score=82.51  Aligned_cols=59  Identities=17%  Similarity=0.283  Sum_probs=52.4

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      ++|.|.. |++.|.... .|..|+++|++++||.|..|++.|.....|..|+++|.+ ++|.
T Consensus         2 k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~   60 (88)
T 1llm_C            2 KPFQCRI-CMRNFSRSD-HLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPIL   60 (88)
T ss_dssp             CCEECTT-TCCEESCHH-HHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHH
T ss_pred             CCCcCCC-CCCccCCHH-HHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-Ccch
Confidence            5799999 999997665 599999999999999999999999999999999999874 4443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=3.9e-09  Score=81.62  Aligned_cols=64  Identities=9%  Similarity=0.078  Sum_probs=55.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhh--cCCCceee-cCCCCccc--CCCccccccccccCCCchhhhh
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGN--ETEPRVFS-CNYCQRKF--YSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~--HtgeKPfs-C~~CgKsF--ssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..++|.|.. |++.|.... .|..|+++  |.+++++. |.+|++.|  .....|..|+++|+++++|...
T Consensus        16 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A           16 GASKFRCKD-CSAAYDTLV-ELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCSEEBSS-SSCEESSHH-HHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             CCCCEECCc-cCchhcCHH-HHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            357899999 999997665 59999998  87777765 99999999  8999999999999999887654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.76  E-value=6e-10  Score=86.01  Aligned_cols=61  Identities=25%  Similarity=0.398  Sum_probs=52.6

Q ss_pred             CccccC--ccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      ++|.|.  . |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus        35 ~~~~C~~~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           35 KPYQCDFKD-CERRFSRSD-QLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC   97 (119)
T ss_dssp             CCEECCSTT-CCCEESSHH-HHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEEC
T ss_pred             CCccCCCCC-CcCccCCHH-HHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeC
Confidence            468898  8 999996655 589999999999999999999999999999999999988888765

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.4e-09  Score=71.35  Aligned_cols=42  Identities=21%  Similarity=0.418  Sum_probs=35.7

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCS
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            467788888999999999999999999999999988888753

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=7.3e-10  Score=72.30  Aligned_cols=41  Identities=17%  Similarity=0.310  Sum_probs=38.1

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            47889999999999999999999999999999999999875

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1e-09  Score=70.63  Aligned_cols=40  Identities=20%  Similarity=0.444  Sum_probs=37.2

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS   41 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            6788999999999999999999999999999999999885

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.75  E-value=2e-09  Score=87.28  Aligned_cols=60  Identities=20%  Similarity=0.367  Sum_probs=46.0

Q ss_pred             cccCccCCccccCCchhHHHHhhhcCCCceeecCC--CCcccCCCccccccccccCCCchhhhh
Q 043134           67 IDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY--CQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        67 f~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~--CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      |.|.. |++.|.... .|..|+++|+++++|.|..  |++.|.....|..|+++|+++++|...
T Consensus        63 ~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  124 (155)
T 2rpc_A           63 EECPR-EGKSFKAKY-KLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE  124 (155)
T ss_dssp             TTCTT-SSCCCSSHH-HHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCS
T ss_pred             cCCCC-cccccCCHH-HHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCC
Confidence            67888 888885544 4778888888888888877  888888888888888888887777654

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=8e-10  Score=71.81  Aligned_cols=41  Identities=22%  Similarity=0.413  Sum_probs=37.5

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS   42 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCC
Confidence            46788999999999999999999999999999999998875

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=6.8e-10  Score=71.14  Aligned_cols=40  Identities=20%  Similarity=0.405  Sum_probs=35.1

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPS   40 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            5678889999999999999999999999999999888875

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=7.4e-10  Score=72.80  Aligned_cols=42  Identities=24%  Similarity=0.396  Sum_probs=37.5

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSS
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            367889999999999999999999999999999999988764

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.75  E-value=9.5e-10  Score=72.11  Aligned_cols=42  Identities=21%  Similarity=0.374  Sum_probs=32.8

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCS
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCC
Confidence            366778888888888888888888888888888888877653

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=7.9e-10  Score=72.51  Aligned_cols=42  Identities=21%  Similarity=0.415  Sum_probs=36.8

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            367889999999999999999999999999999999988764

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=7.8e-10  Score=72.54  Aligned_cols=42  Identities=21%  Similarity=0.385  Sum_probs=36.1

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            467888899999999999999999999999999988888764

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=9.2e-10  Score=72.02  Aligned_cols=42  Identities=21%  Similarity=0.446  Sum_probs=37.7

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            467889999999999999999999999999999999998864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=8.4e-10  Score=72.37  Aligned_cols=42  Identities=24%  Similarity=0.472  Sum_probs=37.0

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|..|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            467889999999999999999999999999999999988764

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1e-09  Score=72.10  Aligned_cols=42  Identities=21%  Similarity=0.477  Sum_probs=37.5

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|++++||.|..|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            467889999999999999999999999999999999988864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=7.6e-10  Score=71.62  Aligned_cols=41  Identities=24%  Similarity=0.346  Sum_probs=37.3

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS   42 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCC
Confidence            46788999999999999999999999999999999998875

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1e-09  Score=71.99  Aligned_cols=40  Identities=23%  Similarity=0.473  Sum_probs=30.3

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCS
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCC
Confidence            5667777777777777777777777777777777777765

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=8.8e-10  Score=72.12  Aligned_cols=42  Identities=21%  Similarity=0.400  Sum_probs=37.4

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            477889999999999999999999999999999999988864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1e-09  Score=71.96  Aligned_cols=42  Identities=24%  Similarity=0.471  Sum_probs=37.7

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP   43 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCC
Confidence            367889999999999999999999999999999999988764

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.74  E-value=9.8e-10  Score=71.90  Aligned_cols=42  Identities=19%  Similarity=0.346  Sum_probs=33.3

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            366778888888888888888888888888888888877753

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.5e-09  Score=71.28  Aligned_cols=41  Identities=22%  Similarity=0.493  Sum_probs=35.7

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            56788899999999999999999999999999998888764

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.2e-09  Score=71.84  Aligned_cols=41  Identities=24%  Similarity=0.452  Sum_probs=37.0

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP   43 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTT
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCC
Confidence            57889999999999999999999999999999999988864

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=8.8e-10  Score=72.41  Aligned_cols=41  Identities=20%  Similarity=0.472  Sum_probs=36.5

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67889999999999999999999999999999999988764

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.2e-09  Score=71.72  Aligned_cols=41  Identities=24%  Similarity=0.441  Sum_probs=33.2

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66778888888888888888888888888888888877753

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1e-09  Score=72.13  Aligned_cols=42  Identities=21%  Similarity=0.472  Sum_probs=37.2

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            467889999999999999999999999999999999988864

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=6.3e-10  Score=71.45  Aligned_cols=40  Identities=18%  Similarity=0.386  Sum_probs=37.2

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            6788999999999999999999999999999999999875

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1e-09  Score=72.00  Aligned_cols=42  Identities=21%  Similarity=0.440  Sum_probs=32.7

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCS
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            366778888888888888888888888888888888777653

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.72  E-value=1.4e-09  Score=71.48  Aligned_cols=40  Identities=25%  Similarity=0.437  Sum_probs=28.8

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCS
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCC
Confidence            5666777777777777777777777777777777776664

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.1e-09  Score=71.17  Aligned_cols=41  Identities=24%  Similarity=0.469  Sum_probs=37.9

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPS   42 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCS
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCC
Confidence            46788999999999999999999999999999999999886

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=8.3e-10  Score=72.54  Aligned_cols=41  Identities=22%  Similarity=0.418  Sum_probs=36.6

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP   43 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67889999999999999999999999999999999988764

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.72  E-value=9.6e-10  Score=72.08  Aligned_cols=42  Identities=24%  Similarity=0.457  Sum_probs=33.8

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP   43 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSS
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCC
Confidence            367778888888888888888888888888888888887753

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=9.2e-10  Score=72.19  Aligned_cols=42  Identities=21%  Similarity=0.445  Sum_probs=37.0

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSST
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCC
Confidence            367889999999999999999999999999999999988864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=9.9e-10  Score=72.02  Aligned_cols=42  Identities=24%  Similarity=0.434  Sum_probs=37.4

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            367889999999999999999999999999999999988864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.72  E-value=7.6e-10  Score=72.74  Aligned_cols=42  Identities=26%  Similarity=0.450  Sum_probs=37.5

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            367889999999999999999999999999999999988864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=8.5e-10  Score=72.49  Aligned_cols=42  Identities=24%  Similarity=0.430  Sum_probs=38.1

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP   43 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCC
Confidence            477889999999999999999999999999999999998864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.2e-09  Score=71.67  Aligned_cols=42  Identities=26%  Similarity=0.358  Sum_probs=36.7

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP   43 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCS
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            367889999999999999999999999999999999888764

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.72  E-value=2.4e-09  Score=82.17  Aligned_cols=57  Identities=14%  Similarity=0.264  Sum_probs=51.6

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      .++|.|.. |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|++.|...
T Consensus        35 ~~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           35 LRPYGCGV-CGKKFKMKH-HLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             CCSEECTT-TSCEESSSH-HHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             CcCccCCC-CCcccCCHH-HHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence            35799999 999997766 5999999999999999999999999999999999998644

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1e-09  Score=71.84  Aligned_cols=42  Identities=26%  Similarity=0.452  Sum_probs=37.4

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            367889999999999999999999999999999999988864

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.72  E-value=9.6e-10  Score=70.43  Aligned_cols=40  Identities=18%  Similarity=0.375  Sum_probs=36.5

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            5788999999999999999999999999999999998875

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.1e-09  Score=71.62  Aligned_cols=42  Identities=21%  Similarity=0.415  Sum_probs=37.6

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCS
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            367889999999999999999999999999999999988864

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.1e-09  Score=71.64  Aligned_cols=41  Identities=22%  Similarity=0.317  Sum_probs=31.8

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSG   42 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            36677788888888888888888888888888888777765

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=8e-10  Score=72.32  Aligned_cols=42  Identities=24%  Similarity=0.457  Sum_probs=37.5

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            467889999999999999999999999999999999988864

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=1e-09  Score=71.97  Aligned_cols=42  Identities=19%  Similarity=0.374  Sum_probs=34.4

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP   43 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            467788888888888888888888888888888888887753

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=1.1e-09  Score=71.06  Aligned_cols=41  Identities=20%  Similarity=0.357  Sum_probs=37.6

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS   42 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCC
Confidence            36788999999999999999999999999999999998875

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=1.3e-09  Score=71.27  Aligned_cols=41  Identities=20%  Similarity=0.318  Sum_probs=30.8

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSG   42 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            35667777777777777777777777777777777777765

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=1.5e-09  Score=70.54  Aligned_cols=41  Identities=20%  Similarity=0.360  Sum_probs=37.7

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      .|+++|++++||.|..|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPS   42 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTT
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcC
Confidence            46788999999999999999999999999999999999886

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=9.9e-10  Score=71.07  Aligned_cols=41  Identities=27%  Similarity=0.454  Sum_probs=37.3

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      .|+++|++++||.|..|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS   42 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCC
Confidence            47788999999999999999999999999999999998875

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=1.1e-09  Score=71.70  Aligned_cols=40  Identities=23%  Similarity=0.432  Sum_probs=31.0

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG   42 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            5667777788888888888888888888887887777765

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.71  E-value=2.1e-09  Score=84.92  Aligned_cols=55  Identities=13%  Similarity=0.106  Sum_probs=49.3

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      .++|.|.. ||+.|.... .|..|+++|  ++||.|.+|++.|.....|..|+++|++.
T Consensus        72 ~~~~~C~~-C~k~f~~~~-~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           72 ISQFVCPL-CLMPFSSSV-SLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HCSEECTT-TCCEESSHH-HHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCeECCC-CCcccCCHh-HHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            46899999 999996655 599999999  89999999999999999999999999875

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=1e-09  Score=71.91  Aligned_cols=41  Identities=20%  Similarity=0.429  Sum_probs=32.5

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP   43 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCS
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            56778888888888888888888888888888888777653

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.2e-09  Score=71.51  Aligned_cols=42  Identities=21%  Similarity=0.379  Sum_probs=32.5

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP   43 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            366778888888888888888888888888888888777653

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.6e-09  Score=70.95  Aligned_cols=41  Identities=20%  Similarity=0.400  Sum_probs=31.5

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP   43 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSST
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            56677778888888888888888888888888877777653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.70  E-value=3.1e-09  Score=81.50  Aligned_cols=62  Identities=16%  Similarity=0.268  Sum_probs=54.6

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ...++|.|.. |++.|.... .|..|+++|  +++|.|.+|++.|.....|..|++ |+++++|...
T Consensus        12 ~~~~~~~C~~-C~~~f~~~~-~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~   73 (107)
T 1wjp_A           12 ENKEVYQCRL-CNAKLSSLL-EQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCL   73 (107)
T ss_dssp             CCCCCCBCTT-TCCBCSSHH-HHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEG
T ss_pred             CCCcCeECCC-CCCccCCHH-HHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCc
Confidence            3457899999 999997665 599999998  479999999999999999999996 9999998765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.6e-09  Score=71.10  Aligned_cols=40  Identities=20%  Similarity=0.402  Sum_probs=28.7

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|..|++.|.....|..|+++|++++||.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSG   42 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCC
Confidence            4566777777777777777777777777777777776664

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.70  E-value=1.5e-09  Score=71.04  Aligned_cols=41  Identities=22%  Similarity=0.415  Sum_probs=32.2

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP   43 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCST
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCC
Confidence            56778888888888888888888888888888888777653

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.5e-09  Score=71.15  Aligned_cols=40  Identities=23%  Similarity=0.434  Sum_probs=28.8

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSG   42 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCS
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCC
Confidence            5566777777777777777777777777777777776664

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.1e-09  Score=71.70  Aligned_cols=40  Identities=23%  Similarity=0.449  Sum_probs=30.2

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSG   42 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCS
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            5667777777777777777777777777777777777765

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.70  E-value=9.7e-10  Score=72.20  Aligned_cols=41  Identities=22%  Similarity=0.427  Sum_probs=29.8

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG   42 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSS
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            35667777777777777777777777777777777777664

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.70  E-value=2.1e-09  Score=83.92  Aligned_cols=61  Identities=18%  Similarity=0.286  Sum_probs=46.7

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCC--CCcccCCCccccccccccCCCchhhh
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY--CQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~--CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      ++|.|.. |++.|.... .|..|+++|+++++|.|..  |++.|.....|..|+++|.++++|..
T Consensus        33 ~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   95 (124)
T 1ubd_C           33 RVHVCAE-CGKAFVESS-KLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC   95 (124)
T ss_dssp             CCEECTT-TCCEESSHH-HHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCC
T ss_pred             CCeECCC-CCchhCCHH-HHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceEC
Confidence            4677888 888886554 4788888888888888875  88888888888888888877766654

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.1e-09  Score=71.68  Aligned_cols=40  Identities=20%  Similarity=0.463  Sum_probs=29.2

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSG   42 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCC
Confidence            5666777777777777777777777777777777777664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=7.9e-10  Score=72.64  Aligned_cols=42  Identities=26%  Similarity=0.447  Sum_probs=37.8

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP   43 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            477889999999999999999999999999999999988864

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.4e-09  Score=71.24  Aligned_cols=40  Identities=25%  Similarity=0.468  Sum_probs=30.8

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSG   42 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCS
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCC
Confidence            5677777778888888888877777878877777777765

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=1.2e-08  Score=69.61  Aligned_cols=45  Identities=11%  Similarity=-0.049  Sum_probs=39.6

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhh-hcCCCceeecCCCCcccCC
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQG-NETEPRVFSCNYCQRKFYS  108 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr-~HtgeKPfsC~~CgKsFss  108 (279)
                      ...++|.|.. |++.|.... .|..|++ +|++++||.|.+|++.|.+
T Consensus         8 ~~~k~~~C~~-C~k~f~~~~-~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            8 SVGKPYICQS-CGKGFSRPD-HLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CSSCCEECSS-SCCEESSHH-HHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCeECCC-CCcccCCHH-HHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4457899999 999996665 5999987 9999999999999999976

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=2.1e-09  Score=70.61  Aligned_cols=41  Identities=24%  Similarity=0.520  Sum_probs=37.3

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCC-Cchhhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKR-ERTLAK  127 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~Htg-ERpy~k  127 (279)
                      |+++|++++||.|..|++.|.....|..|+++|++ +++|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            67889999999999999999999999999999999 888864

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.3e-09  Score=71.48  Aligned_cols=42  Identities=21%  Similarity=0.430  Sum_probs=33.0

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP   43 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCS
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            366778888888888888888888888888888888877753

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.1e-09  Score=71.62  Aligned_cols=41  Identities=29%  Similarity=0.432  Sum_probs=31.9

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSS
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            56777888888888888888888888888888887777653

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=9.4e-10  Score=72.13  Aligned_cols=42  Identities=21%  Similarity=0.469  Sum_probs=36.9

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCS
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            467889999999999999999999999999999999988764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.70  E-value=3e-09  Score=82.44  Aligned_cols=56  Identities=14%  Similarity=0.245  Sum_probs=29.6

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCcccccccc-ccCCC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQN-AHKRE  122 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr-~HtgE  122 (279)
                      .+|.|.. |++.|.... .|..|+++|++++||.|.+|++.|.....|..|++ .|.++
T Consensus        65 ~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           65 QVFTCSV-CQETFRRRM-ELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             CCEECSS-SCCEESSHH-HHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             CCeECCC-CCCccCCHH-HHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            3455555 555554333 35555555555555555555555555555555553 44443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.69  E-value=2.4e-09  Score=80.34  Aligned_cols=61  Identities=15%  Similarity=0.230  Sum_probs=32.2

Q ss_pred             CccccC--ccCCccccCCchhHHHHhhhcCCCceeecC--CCCcccCCCccccccccccCCCchhhh
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQGNETEPRVFSCN--YCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeKPfsC~--~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      ++|.|.  . |++.|.... .|..|+++|+++++|.|.  .|++.|.....|..|+++|+++++|..
T Consensus        14 ~~~~C~~~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   78 (100)
T 2ebt_A           14 RIHYCDYPG-CTKVYTKSS-HLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC   78 (100)
T ss_dssp             CCEECCSSS-CCCEESCHH-HHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBC
T ss_pred             cceEcCCCC-CCCcccCHH-HHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeEC
Confidence            345554  4 555553333 355555555555555553  355555555555555555555555543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.69  E-value=3.3e-09  Score=79.00  Aligned_cols=57  Identities=14%  Similarity=0.247  Sum_probs=50.9

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCC--ceeecCCCCcccCCCcccccccc-ccCCC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEP--RVFSCNYCQRKFYSSQALGGHQN-AHKRE  122 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~Htge--KPfsC~~CgKsFssssaL~~Hqr-~HtgE  122 (279)
                      .++|.|.. |++.|.... .|..|+++|+++  ++|.|.+|++.|.....|..|++ +|.++
T Consensus        33 ~~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           33 EKPYSCPV-CGLRFKRKD-RMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SCSEECSS-SCCEESCHH-HHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             CCCCcCCC-CCCccCCHH-HHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            35799999 999997655 599999999987  99999999999999999999985 88775

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=8.8e-10  Score=72.27  Aligned_cols=43  Identities=23%  Similarity=0.335  Sum_probs=38.8

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|...
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999999988753

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.2e-09  Score=70.94  Aligned_cols=40  Identities=25%  Similarity=0.489  Sum_probs=27.9

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   40 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG   40 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCS
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            4556777777777777777777777777777777776664

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.8e-09  Score=70.87  Aligned_cols=40  Identities=20%  Similarity=0.365  Sum_probs=29.2

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSG   42 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCC
Confidence            5566777777777777777777777777777777777664

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.6e-09  Score=70.84  Aligned_cols=42  Identities=24%  Similarity=0.467  Sum_probs=32.2

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSS
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            366777888888888888888888888888888887777653

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.1e-09  Score=71.86  Aligned_cols=42  Identities=26%  Similarity=0.510  Sum_probs=36.2

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            367788999999999999999999999999999998888764

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.68  E-value=1.6e-09  Score=71.11  Aligned_cols=40  Identities=23%  Similarity=0.429  Sum_probs=29.2

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSG   42 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCS
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCC
Confidence            4566777777777777777777777777777777777664

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.3e-09  Score=71.27  Aligned_cols=40  Identities=25%  Similarity=0.502  Sum_probs=27.4

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSG   42 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            5566667777777777777777777777777776666654

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.1e-09  Score=71.75  Aligned_cols=40  Identities=23%  Similarity=0.410  Sum_probs=30.4

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSG   42 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCC
Confidence            5667777777777777777777777777777777777765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.6e-09  Score=71.20  Aligned_cols=41  Identities=22%  Similarity=0.414  Sum_probs=31.2

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSS
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            35677777778888888888887777888877777777765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.3e-09  Score=71.38  Aligned_cols=40  Identities=23%  Similarity=0.492  Sum_probs=28.9

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG   42 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSS
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            5666777777777777777777777777777777777664

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.8e-09  Score=70.79  Aligned_cols=42  Identities=21%  Similarity=0.481  Sum_probs=33.7

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            367778888888888888888888888888888888877753

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.68  E-value=3.5e-09  Score=82.56  Aligned_cols=62  Identities=23%  Similarity=0.295  Sum_probs=54.7

Q ss_pred             cCccccC--ccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           64 LNLIDCF--KSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        64 ~nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .++|.|.  . |++.|.... .|..|+++| ++++|.|..|++.|.....|..|+++|.++++|...
T Consensus         3 ~~~~~C~~~~-C~~~f~~~~-~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   66 (124)
T 1ubd_C            3 PRTIACPHKG-CTKMFRDNS-AMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT   66 (124)
T ss_dssp             --CEECCSTT-CCCEESSHH-HHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECC
T ss_pred             CCcccCCCCC-CcCccCCHH-HHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCC
Confidence            4578999  8 999997665 599999999 889999999999999999999999999999888764

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1e-09  Score=71.99  Aligned_cols=42  Identities=24%  Similarity=0.413  Sum_probs=33.4

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSS
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCC
Confidence            366778888888888888888888888888888888877753

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1e-09  Score=72.06  Aligned_cols=42  Identities=24%  Similarity=0.419  Sum_probs=33.7

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP   43 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCC
Confidence            467778888888888888888888888888888888877753

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=1.3e-09  Score=71.50  Aligned_cols=41  Identities=20%  Similarity=0.417  Sum_probs=31.7

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSG   42 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSS
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCC
Confidence            35677778888888888888888888888888887777765

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=1.1e-09  Score=71.72  Aligned_cols=42  Identities=21%  Similarity=0.445  Sum_probs=37.5

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            367889999999999999999999999999999999988864

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=1.3e-09  Score=71.29  Aligned_cols=42  Identities=21%  Similarity=0.433  Sum_probs=37.3

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|..|++.|.....|..|+++|+++++|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCS
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            467889999999999999999999999999999999988764

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=1e-09  Score=71.91  Aligned_cols=40  Identities=25%  Similarity=0.419  Sum_probs=31.0

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSG   42 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCS
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            5677777788888888888888888888887777777765

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=1.3e-09  Score=71.40  Aligned_cols=40  Identities=18%  Similarity=0.400  Sum_probs=29.6

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSG   42 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCC
Confidence            5667777777777777777777777777777777777665

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1.6e-09  Score=71.15  Aligned_cols=41  Identities=20%  Similarity=0.421  Sum_probs=33.9

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            56778888888888888888888888888888888887753

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1.5e-09  Score=71.01  Aligned_cols=40  Identities=25%  Similarity=0.426  Sum_probs=26.8

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSG   42 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCC
Confidence            5566666666777777777766666666766666666654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.66  E-value=4.2e-09  Score=81.59  Aligned_cols=62  Identities=23%  Similarity=0.345  Sum_probs=45.8

Q ss_pred             CccccCccCCccccCCchhHHHHhhh---cCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGN---ETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~---HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ++|.|.. |++.|.... .|..|++.   |.++++|.|.+|++.|.....|..|+++|.++++|...
T Consensus        34 ~~~~C~~-C~~~f~~~~-~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   98 (124)
T 2dlq_A           34 KPFECPK-CGKCYFRKE-NLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCS   98 (124)
T ss_dssp             CSCBCTT-TCCBCSSHH-HHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECS
T ss_pred             CCeECCC-CCchhcCHH-HHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCC
Confidence            4677888 888885554 47777764   56777888888888888888888888888777776543

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=2e-09  Score=70.57  Aligned_cols=40  Identities=23%  Similarity=0.512  Sum_probs=28.9

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSG   42 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCC
Confidence            4566777777777777777777777777777777777664

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.65  E-value=2.1e-09  Score=90.19  Aligned_cols=63  Identities=21%  Similarity=0.288  Sum_probs=56.5

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .++|.|.. |++.|.... .|..|+++|.++++|.|..|++.|.....|..|+++|.++++|...
T Consensus        75 ~~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  137 (190)
T 2i13_A           75 EKPYKCPE-CGKSFSQRA-NLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP  137 (190)
T ss_dssp             CCCEECTT-TCCEESCHH-HHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECT
T ss_pred             CCCccCcc-cCCccCCHH-HHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECC
Confidence            35799999 999996665 5999999999999999999999999999999999999999988765

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.65  E-value=5.3e-09  Score=74.65  Aligned_cols=56  Identities=21%  Similarity=0.384  Sum_probs=48.7

Q ss_pred             CCcCcccc--CccCCccccCCchhHHHHhhhcCCCceeecCC--CCcccCCCcccccccccc
Q 043134           62 PELNLIDC--FKSTDSSQDSLENNDIHRQGNETEPRVFSCNY--CQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        62 ~e~nlf~C--~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~--CgKsFssssaL~~Hqr~H  119 (279)
                      ...+.|.|  .. |++.|.... .|..|+++|++++||.|.+  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPG-CGKTYFKSS-HLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTT-TCCEESSHH-HHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCC-CccccCCHH-HHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            44567889  45 999997665 5999999999999999975  999999999999999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=2e-09  Score=70.49  Aligned_cols=40  Identities=25%  Similarity=0.453  Sum_probs=29.4

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSG   42 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCC
Confidence            5666777777777777777777777777777777777664

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.1e-09  Score=72.00  Aligned_cols=42  Identities=29%  Similarity=0.532  Sum_probs=37.1

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            367889999999999999999999999999999998888764

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.4e-09  Score=71.28  Aligned_cols=40  Identities=23%  Similarity=0.509  Sum_probs=29.5

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSG   42 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSS
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCC
Confidence            5667777777777777777777777777777777777665

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2e-09  Score=70.51  Aligned_cols=40  Identities=18%  Similarity=0.345  Sum_probs=29.3

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG   42 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCC
Confidence            5666777777777777777777777777777777777665

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.64  E-value=4.5e-09  Score=77.16  Aligned_cols=53  Identities=23%  Similarity=0.316  Sum_probs=37.1

Q ss_pred             CccccC--ccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCcccccccccc
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~H  119 (279)
                      ++|.|.  . |++.|.... .|..|+++|+++++|.|..|++.|.....|..|+++|
T Consensus        34 ~~~~C~~~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           34 KPYHCDWDG-CGWKFARSD-ELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             CCEECCSTT-TCCEESSHH-HHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCcCCCCCC-CCCccCCHH-HHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            456775  5 777775444 4777777777777777777777777777777777766

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=3.1e-09  Score=69.61  Aligned_cols=40  Identities=20%  Similarity=0.365  Sum_probs=30.3

Q ss_pred             HhhhcCCCceeecCCCCcccCCCcccccccc-ccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQN-AHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr-~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|++ +|++++||.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~   43 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSG   43 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSS
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCC
Confidence            5667777777777777777777777777777 777777765

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=2.3e-09  Score=69.71  Aligned_cols=40  Identities=23%  Similarity=0.292  Sum_probs=34.0

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPS   42 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCC
Confidence            5677888888889889988888888888888888888875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.62  E-value=9.1e-09  Score=77.10  Aligned_cols=56  Identities=21%  Similarity=0.335  Sum_probs=50.5

Q ss_pred             cCccccC--ccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCC
Q 043134           64 LNLIDCF--KSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKR  121 (279)
Q Consensus        64 ~nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~Htg  121 (279)
                      .++|.|.  . |++.|.... .|..|+++|+++++|.|.+|++.|.....|..|+++|++
T Consensus        43 ~~~~~C~~~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           43 EKPYKCTWEG-CDWRFARSD-ELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CCCEECCSSS-CCCEESSHH-HHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCCeeCCCCC-CCCccCCHH-HHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            4679995  7 999997665 599999999999999999999999999999999999864

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=5.6e-09  Score=66.72  Aligned_cols=38  Identities=21%  Similarity=0.461  Sum_probs=33.8

Q ss_pred             hhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           89 GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      ++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS   40 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcC
Confidence            56889999999999999999999999999999998875

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=2e-09  Score=70.77  Aligned_cols=40  Identities=20%  Similarity=0.384  Sum_probs=24.5

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSG   42 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCC
Confidence            3455666666666666666666666666666666665554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=4.3e-09  Score=74.34  Aligned_cols=56  Identities=13%  Similarity=0.111  Sum_probs=48.5

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      ..++|.|.. |++.|..... |..       +++|.|..|++.|.....|..|+++|+++++|..
T Consensus        15 ~~~~~~C~~-C~k~f~~~~~-l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A           15 GDRSQKCSK-CGIIFIRRST-LSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             CCSEEECSS-SCCEEECCCC-CCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             CCCCeeCCc-ccchhCCHHH-hCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            346899999 9999977664 332       7899999999999999999999999999998863

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.61  E-value=3.2e-09  Score=76.97  Aligned_cols=54  Identities=17%  Similarity=0.292  Sum_probs=49.6

Q ss_pred             cccc--CccCCccccCCchhHHHHhhhcCCCceeecCC--CCcccCCCccccccccccCC
Q 043134           66 LIDC--FKSTDSSQDSLENNDIHRQGNETEPRVFSCNY--CQRKFYSSQALGGHQNAHKR  121 (279)
Q Consensus        66 lf~C--~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~--CgKsFssssaL~~Hqr~Htg  121 (279)
                      +|.|  .. |++.|.... .|..|+++|+++++|.|..  |++.|.....|..|+++|++
T Consensus         1 p~~C~~~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            1 MYVCHFEN-CGKAFKKHN-QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CEECCSTT-CCCEESSHH-HHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CccCCCCC-CCcccCCHH-HHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            4789  99 999997665 5999999999999999998  99999999999999999987

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.61  E-value=5.8e-09  Score=84.56  Aligned_cols=60  Identities=12%  Similarity=0.070  Sum_probs=35.5

Q ss_pred             ccccCccCCccccCCchhHHHHhhh-cCCCce--------eecCCCCcccCCCccccccccccCCCchhhh
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQGN-ETEPRV--------FSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hqr~-HtgeKP--------fsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|.|.. |++.|.... .|..|++. |.++++        |.|..|++.|.....|..|+++|.++++|..
T Consensus        25 ~~~C~~-C~~~f~~~~-~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   93 (155)
T 2rpc_A           25 SRPKKS-CDRTFSTMH-ELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPC   93 (155)
T ss_dssp             SSSCCC-CCCCBSSHH-HHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEEC
T ss_pred             cccccc-CCcccCCHH-HHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccC
Confidence            455666 666664443 36666654 555443        5666666666666666666666666666554

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=2.5e-09  Score=70.17  Aligned_cols=40  Identities=18%  Similarity=0.347  Sum_probs=24.6

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   42 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSG   42 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCC
Confidence            3455666666666666666666666666666666665554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.59  E-value=1.7e-08  Score=81.48  Aligned_cols=62  Identities=21%  Similarity=0.356  Sum_probs=50.5

Q ss_pred             CccccC--ccCCccccCCchhHHHHhhhcCCCceeecCC--CCcccCCCccccccc-cccCCCchhhhh
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQGNETEPRVFSCNY--CQRKFYSSQALGGHQ-NAHKRERTLAKR  128 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~--CgKsFssssaL~~Hq-r~HtgERpy~kr  128 (279)
                      ++|.|.  . |++.|.... .|..|+++|+++++|.|.+  |++.|.+...|..|+ ++|+++++|...
T Consensus        66 ~~~~C~~~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~  132 (155)
T 2gli_A           66 KPHKCTFEG-CRKSYSRLE-NLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCK  132 (155)
T ss_dssp             CCCCCCSTT-CCCCCSSHH-HHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECC
T ss_pred             CCccCCCCC-CCCcccCHH-HHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            568886  6 888886655 5888888888888899988  999998888888887 788888777653

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=3.9e-09  Score=68.93  Aligned_cols=40  Identities=25%  Similarity=0.451  Sum_probs=33.1

Q ss_pred             hhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           88 QGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        88 qr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .++|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS   43 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCS
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCC
Confidence            4668888888888888888888888888888888887754

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=2.8e-08  Score=65.89  Aligned_cols=41  Identities=5%  Similarity=-0.014  Sum_probs=35.8

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCc
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQR  104 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgK  104 (279)
                      ...++|.|.. |++.|.... .|..|+++|++++||.|.+|+|
T Consensus         8 ~~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEI-CGKIFRDVY-HLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETT-TTEEESSHH-HHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCC-CCcccCCHH-HHHHHHHhcCCCCCccCCCCCC
Confidence            4557899999 999996665 5999999999999999999986

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=4.3e-09  Score=65.53  Aligned_cols=36  Identities=19%  Similarity=0.508  Sum_probs=33.5

Q ss_pred             hhcCCCceeecCCCCcccCCCccccccccccCCCch
Q 043134           89 GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERT  124 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERp  124 (279)
                      ++|++++||.|.+|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999875

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=7.9e-09  Score=79.89  Aligned_cols=56  Identities=23%  Similarity=0.275  Sum_probs=49.0

Q ss_pred             CccccCccCCccc--cCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCC
Q 043134           65 NLIDCFKSTDSSQ--DSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        65 nlf~C~e~CGksF--ss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      ..+.|.. |++.|  .... .|..|+++|++++||.|.+|++.|.....|..|+++|...
T Consensus        49 ~~~~C~~-C~~~f~f~~~~-~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           49 NHETDNN-NPKRWSKPRKR-SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             CCCCCCC-CCSCCSSCCCC-CCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTT
T ss_pred             CCccCCC-CCcccccccHH-HHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCc
Confidence            3456999 99999  6665 4999999999999999999999999999999999887543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.56  E-value=7.9e-09  Score=79.64  Aligned_cols=54  Identities=26%  Similarity=0.422  Sum_probs=49.3

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeec--CCCCcccCCCcccccccccc
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSC--NYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC--~~CgKsFssssaL~~Hqr~H  119 (279)
                      .++|.|.. |++.|.... .|..|+++|+++++|.|  ..|++.|.....|..|+++|
T Consensus        64 ~~~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           64 VKPFQCKT-CQRKFSRSD-HLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CCCEECTT-TCCEESCHH-HHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCccCCc-cCchhCCHH-HHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            46799999 999997665 59999999999999999  89999999999999999886

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=5.4e-09  Score=68.69  Aligned_cols=40  Identities=18%  Similarity=0.330  Sum_probs=31.6

Q ss_pred             hhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           88 QGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        88 qr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +++|+++++|.|.+|++.|.....|..|+++|++++||..
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            4567788888888888888888888888888888877753

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.54  E-value=9e-09  Score=64.03  Aligned_cols=36  Identities=28%  Similarity=0.437  Sum_probs=33.7

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCCC
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      |+++|++++||.|.+|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            678899999999999999999999999999999875

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=8.2e-09  Score=67.52  Aligned_cols=39  Identities=23%  Similarity=0.493  Sum_probs=23.2

Q ss_pred             hhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           88 QGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        88 qr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      +++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSG   42 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCS
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCC
Confidence            345556666666666666666666666666666655554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.51  E-value=1.6e-08  Score=62.11  Aligned_cols=35  Identities=20%  Similarity=0.425  Sum_probs=32.1

Q ss_pred             hcCCCceeecCCCCcccCCCccccccccccCCCch
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERT  124 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERp  124 (279)
                      +|++++||.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            47899999999999999999999999999998875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.49  E-value=1.5e-08  Score=61.97  Aligned_cols=35  Identities=23%  Similarity=0.400  Sum_probs=31.7

Q ss_pred             hcCCCceeecCCCCcccCCCccccccccccCCCch
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERT  124 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERp  124 (279)
                      +|++++||.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47889999999999999999999999999998864

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.48  E-value=1.3e-08  Score=66.03  Aligned_cols=38  Identities=18%  Similarity=0.384  Sum_probs=26.6

Q ss_pred             hhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           89 GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      ++|+++++|.|.+|++.|.....|..|+++|+++++|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   40 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGP   40 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSS
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCcc
Confidence            34667777777777777777777777777777776664

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.45  E-value=2.7e-08  Score=83.39  Aligned_cols=63  Identities=17%  Similarity=0.248  Sum_probs=48.5

Q ss_pred             cCcccc--CccCCccccCCchhHHHHhhhcCCCceeec--CCCCcccCCCccccccccccCCCchhhhh
Q 043134           64 LNLIDC--FKSTDSSQDSLENNDIHRQGNETEPRVFSC--NYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        64 ~nlf~C--~e~CGksFss~ss~L~~Hqr~HtgeKPfsC--~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .++|.|  .. |++.|.... .|..|+++|+++++|.|  ..|++.|.....|..|+++|.++++|...
T Consensus        10 ~~~~~C~~~~-C~~~f~~~~-~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   76 (190)
T 1tf6_A           10 YKRYICSFAD-CGAAYNKNW-KLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCD   76 (190)
T ss_dssp             CCCCBCSSTT-TCCBCSSHH-HHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECC
T ss_pred             CcceeCCCCC-CcchhCCHH-HHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCC
Confidence            456778  57 888886554 48888888888888888  77888888888888888888887777654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=9.6e-09  Score=67.34  Aligned_cols=37  Identities=24%  Similarity=0.468  Sum_probs=19.0

Q ss_pred             hhcCCCceeecCCCCcccCCCccccccccccCCCchh
Q 043134           89 GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL  125 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy  125 (279)
                      ++|+++++|.|.+|++.|.....|..|+++|+++++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPS   41 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            3445555555555555555555555555555555444

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.42  E-value=2.7e-08  Score=72.96  Aligned_cols=62  Identities=18%  Similarity=0.251  Sum_probs=53.7

Q ss_pred             CccccC--ccCCccccCCchhHHHHhhhcCCCceeecC--CCCcccCCCccccccccccCCCchhhhh
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQGNETEPRVFSCN--YCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeKPfsC~--~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..|.|.  . |++.|.... .|..|+++|+++++|.|.  .|++.|.....|..|+++|+++++|...
T Consensus         4 ~~~~C~~~~-C~~~f~~~~-~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   69 (89)
T 2wbs_A            4 ATHTCDYAG-CGKTYTKSS-HLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQ   69 (89)
T ss_dssp             CCEECCSTT-TCCEESSHH-HHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECS
T ss_pred             CCeeCCCCC-CCCcCCCHH-HHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCC
Confidence            356675  5 999997655 599999999999999997  5999999999999999999999887654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.40  E-value=2.1e-08  Score=61.69  Aligned_cols=33  Identities=24%  Similarity=0.458  Sum_probs=25.5

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      +||.|.+|++.|.....|..|+++|+++++|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            467888888888888888888888888877753

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.40  E-value=5.8e-08  Score=81.34  Aligned_cols=63  Identities=17%  Similarity=0.195  Sum_probs=45.9

Q ss_pred             cCccccC--ccCCccccCCchhHHHHh-hhc-CCCceeec--CCCCcccCCCccccccccccCCCchhhhh
Q 043134           64 LNLIDCF--KSTDSSQDSLENNDIHRQ-GNE-TEPRVFSC--NYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        64 ~nlf~C~--e~CGksFss~ss~L~~Hq-r~H-tgeKPfsC--~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .++|.|.  . |++.|.... .|..|+ +.| .++++|.|  ..|++.|.....|..|+++|+++++|...
T Consensus        70 ~~~~~C~~~~-C~~~f~~~~-~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~  138 (190)
T 1tf6_A           70 EKNFTCDSDG-CDLRFTTKA-NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP  138 (190)
T ss_dssp             CCCEECCSSS-CCCEESCHH-HHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCC
T ss_pred             CCceeCCCCC-CCCccCCHH-HHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCC
Confidence            3567787  7 888885554 477777 666 46677888  77888888888888888888877777663

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=2.9e-08  Score=65.12  Aligned_cols=39  Identities=23%  Similarity=0.463  Sum_probs=23.9

Q ss_pred             hhhcCCCceeecC--CCCcccCCCccccccccccCCCchhh
Q 043134           88 QGNETEPRVFSCN--YCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        88 qr~HtgeKPfsC~--~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      .++|++++||.|.  .|++.|.....|..|+++|+++++|.
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   44 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSG   44 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCS
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            3456666666665  56666666666666666666666554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.38  E-value=3.7e-08  Score=61.27  Aligned_cols=35  Identities=26%  Similarity=0.498  Sum_probs=31.8

Q ss_pred             hhcCCCceeecCCCCcccCCC-ccccccccccCCCc
Q 043134           89 GNETEPRVFSCNYCQRKFYSS-QALGGHQNAHKRER  123 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFsss-saL~~Hqr~HtgER  123 (279)
                      ++|++++||.|.+|++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            468899999999999999999 99999999998874

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.37  E-value=2.4e-07  Score=60.52  Aligned_cols=38  Identities=5%  Similarity=-0.106  Sum_probs=34.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            9 GEKPFKCVE-CGKGFSRRS-ALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCSS-SCCCBSSTT-HHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCcccCc-cCcccCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            457899999 999997776 59999999999999999998

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=5.6e-08  Score=60.09  Aligned_cols=34  Identities=21%  Similarity=0.450  Sum_probs=31.0

Q ss_pred             hcCCCceeecCCCCcccCCCccccccccccCCCc
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      .|++++||.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5788999999999999999999999999998874

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.34  E-value=1.5e-07  Score=61.27  Aligned_cols=39  Identities=5%  Similarity=-0.198  Sum_probs=29.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQ  103 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~Cg  103 (279)
                      ..++|.|.. |++.|.... .|..|+++|+++++|.|..||
T Consensus         7 ~~k~~~C~~-C~k~f~~~~-~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            7 GEKPYSCPV-CGLRFKRKD-RMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SCCSSEETT-TTEECSCHH-HHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCcCCC-CCcccCCHH-HHHHHHHHccCCCCCCCcCCC
Confidence            346788888 888885544 588888888888888888885

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=2.2e-07  Score=60.64  Aligned_cols=38  Identities=8%  Similarity=-0.132  Sum_probs=34.0

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            9 VEKPYKCED-CGKGYNRRL-NLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSSCBCSS-SCCBCSSHH-HHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCeeCcc-cCchhCCHH-HHHHHHHhcCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999998

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=98.34  E-value=3.2e-08  Score=70.71  Aligned_cols=36  Identities=28%  Similarity=0.555  Sum_probs=33.8

Q ss_pred             CCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           93 EPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        93 geKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .||||.|.+|++.|.....|..|+++|+++|||...
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~   36 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCP   36 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECT
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECC
Confidence            379999999999999999999999999999999865

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=2.3e-07  Score=60.42  Aligned_cols=38  Identities=8%  Similarity=-0.038  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            9 GKKPYKCNE-CGKVFTQNS-HLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCBCTT-TCCBCSSHH-HHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCeECCC-CCCeeCCHH-HHHHHhhhcCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.34  E-value=3.3e-08  Score=64.39  Aligned_cols=39  Identities=15%  Similarity=0.348  Sum_probs=35.9

Q ss_pred             hhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           89 GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      ..|++++||.|.+|++.|.....|..|+++|+++++|..
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C   41 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG   41 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCC
Confidence            358999999999999999999999999999999998864

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.33  E-value=5.6e-08  Score=59.16  Aligned_cols=31  Identities=29%  Similarity=0.502  Sum_probs=28.4

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCchh
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRERTL  125 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgERpy  125 (279)
                      +||.|.+|++.|.....|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5899999999999999999999999999886

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=2.3e-07  Score=60.47  Aligned_cols=38  Identities=8%  Similarity=-0.038  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            9 GEKPFDCID-CGKAFSDHI-GLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCTT-TCCCBSSHH-HHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCeECCC-CCceeCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999988

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=6.1e-08  Score=59.93  Aligned_cols=35  Identities=26%  Similarity=0.515  Sum_probs=31.4

Q ss_pred             hhcCCCceeecCCCCcccCCCccccccccccCCCc
Q 043134           89 GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +.|++++||.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            35889999999999999999999999999998874

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=2.8e-07  Score=59.89  Aligned_cols=38  Identities=8%  Similarity=-0.073  Sum_probs=34.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            9 GEKPCKCTE-CGKAFCWKS-QLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SCCEESSSH-HHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCeeCCC-CCCccCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            356899999 999997766 59999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=2.4e-07  Score=60.47  Aligned_cols=38  Identities=8%  Similarity=-0.070  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            9 GEKPYGCSE-CGKAFSSKS-YLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCBCSS-SCCBCSCHH-HHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCCcCCCc-cChhhCChH-HHHHHHHHhCCCCCCCCCCC
Confidence            456899999 999997665 59999999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.32  E-value=2.7e-07  Score=60.10  Aligned_cols=38  Identities=8%  Similarity=-0.087  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            9 GEKTWKCRE-CDMCFSQAS-SLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSS-SCCCCSSHH-HHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCeECCC-CCcccCCHH-HHHHHHHHcCCCCCcCCCCC
Confidence            457899999 999997665 59999999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=2.2e-07  Score=60.57  Aligned_cols=38  Identities=5%  Similarity=-0.148  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            9 GEKPYKCEE-CGKGFICRR-DLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SCCEESCHH-HHHHHGGGGTTCCCSSTTCC
T ss_pred             CCcCccCCC-ccchhCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999998

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=2.5e-07  Score=60.30  Aligned_cols=38  Identities=11%  Similarity=-0.047  Sum_probs=34.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            9 GEKPFKCGE-CGKSYNQRV-HLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCSEECTT-TCCEESSSH-HHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCeECCC-CCcccCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            457899999 999997766 59999999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.32  E-value=2.3e-07  Score=60.29  Aligned_cols=38  Identities=11%  Similarity=-0.011  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            9 GVKPYGCSQ-CAKTFSLKS-QLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SSCEESSHH-HHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCceECCC-CCchhCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.31  E-value=2.3e-07  Score=60.60  Aligned_cols=38  Identities=13%  Similarity=0.027  Sum_probs=34.0

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            9 GVNPYKCSQ-CEKSFSGKL-RLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SSCEESSHH-HHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCeECCC-CCcccCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=2.6e-07  Score=60.07  Aligned_cols=38  Identities=8%  Similarity=-0.066  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            9 GEKPYKCNE-CGKAFSQTS-KLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCTTCCTT-TCCCCSSHH-HHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCcCCCC-CCCccCCHH-HHHHHHHhcCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999998

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=2.5e-07  Score=60.15  Aligned_cols=38  Identities=8%  Similarity=-0.007  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            9 GEKLYNCKE-CGKSFSRAP-CLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCBTT-TTBCCSCHH-HHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCeECCC-CCCccCchH-HHHHHHHhcCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999998

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=5e-08  Score=61.03  Aligned_cols=36  Identities=19%  Similarity=0.479  Sum_probs=32.5

Q ss_pred             cCCCceeecC--CCCcccCCCccccccccccCCCchhh
Q 043134           91 ETEPRVFSCN--YCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        91 HtgeKPfsC~--~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      |++++||.|.  .|++.|.....|..|+++|+++++|.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            5789999999  59999999999999999999998873

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=2.4e-07  Score=60.37  Aligned_cols=38  Identities=8%  Similarity=-0.137  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            9 GEKPYKCNE-CGKVFRHNS-YLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSEECSS-SCCEESSHH-HHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCeECCC-CCchhCChH-HHHHHHhhcCCCCCCCCCCC
Confidence            357899999 999997665 59999999999999999998

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.30  E-value=1.9e-07  Score=65.67  Aligned_cols=49  Identities=16%  Similarity=0.303  Sum_probs=40.4

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccc
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQ  116 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hq  116 (279)
                      ..++|.|.. ||+.|..... |   .++|++++||.|.+|++.|.....+..+.
T Consensus        11 ~~k~~~C~~-C~k~F~~~~~-l---~~~H~~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A           11 NRASFKCPV-CSSTFTDLEA-N---QLFDPMTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             SSSEEECSS-SCCEEEHHHH-H---HHEETTTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             CCCCccCCC-CCchhccHHH-h---HhhcCCCCCEECCCCCCccccCccccccc
Confidence            357899999 9999965442 3   38899999999999999999888877654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=6.7e-08  Score=59.47  Aligned_cols=34  Identities=18%  Similarity=0.338  Sum_probs=30.9

Q ss_pred             hcCCCceeecCCCCcccCCCccccccccccCCCc
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +|++++||.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5889999999999999999999999999998874

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=5.8e-08  Score=60.89  Aligned_cols=34  Identities=15%  Similarity=0.366  Sum_probs=31.4

Q ss_pred             hhcCCCceeecCCCCcccCCCcccccc-ccccCCC
Q 043134           89 GNETEPRVFSCNYCQRKFYSSQALGGH-QNAHKRE  122 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFssssaL~~H-qr~HtgE  122 (279)
                      ++|++++||.|..|++.|.....|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            578999999999999999999999999 8999875

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=2.7e-07  Score=60.13  Aligned_cols=38  Identities=5%  Similarity=-0.108  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            9 GEKPYECSV-CGKAFSHRQ-SLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSS-SCCEESSHH-HHHHHHGGGSSCCCSCSSCC
T ss_pred             CCCCeeCCC-cCCccCCHH-HHHHHHHHhcCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999998

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=2.5e-07  Score=60.28  Aligned_cols=38  Identities=8%  Similarity=-0.109  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            9 GEKPYKCHE-CGKVFRRNS-HLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCEECTT-TCCEESSHH-HHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCeECCC-CCchhCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.29  E-value=2.6e-07  Score=60.30  Aligned_cols=38  Identities=11%  Similarity=0.005  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            9 GEKPYECKE-CGKAFSQTT-HLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSCBCSS-SCCBCSCHH-HHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCceECCC-CCchhCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=2.9e-07  Score=59.96  Aligned_cols=38  Identities=8%  Similarity=-0.174  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            9 GEKPFKCDI-CGKSFCGRS-RLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCSS-SCCCCSSHH-HHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCcCCCc-CCchhCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=2.5e-07  Score=60.16  Aligned_cols=38  Identities=8%  Similarity=-0.106  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~-C~k~F~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            9 GEKPYKCNE-CGKVFTQNS-HLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSSEETT-TTEECSSHH-HHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCeECCC-cChhhCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=3.1e-07  Score=59.71  Aligned_cols=38  Identities=13%  Similarity=-0.094  Sum_probs=33.7

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            9 GEKPHECRE-CGKSFSFNS-QLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCBCTT-TCCBCSSHH-HHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCCeeCCC-CCchhCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=2.8e-07  Score=60.14  Aligned_cols=38  Identities=8%  Similarity=-0.078  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            9 GGKHFECTE-CGKAFTRKS-TLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSS-SCCEESCHH-HHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCCeECCC-CCchhCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=2.6e-07  Score=60.19  Aligned_cols=38  Identities=5%  Similarity=-0.073  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            9 GEKPFKCEE-CGKGFYTNS-QCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SCCEESSHH-HHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCcCCCC-CCCcCCChH-HHHHHHHHhCCCCCCCCCCC
Confidence            456899999 999997665 59999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.29  E-value=2.9e-07  Score=59.81  Aligned_cols=38  Identities=8%  Similarity=-0.074  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            9 GEKPYNCKE-CGKSFRWAS-CLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SCCEESSHH-HHHHHGGGGTSCCCCSTTCC
T ss_pred             CCcCeECCc-cccccCChH-HHHHHHHHhCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999998

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=2.7e-07  Score=59.98  Aligned_cols=38  Identities=5%  Similarity=-0.164  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            9 GEKSHTCDE-CGKNFCYIS-ALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCSSEECTT-TCCEESSHH-HHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCeECCC-cCcccCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=3.2e-07  Score=59.62  Aligned_cols=38  Identities=13%  Similarity=-0.121  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            9 GEKPYKCSD-CGKSFTWKS-RLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             SCCSCBCSS-SCCBCSSHH-HHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCccCCc-cChhhCCHH-HHHHHHHhcCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=2.6e-07  Score=60.21  Aligned_cols=38  Identities=5%  Similarity=-0.115  Sum_probs=34.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            9 GEKPYKCNE-CGKVFTQNS-HLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCSSEECSS-SCCEESSSH-HHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCeECCc-CCchhCCHH-HHHHHHHhcCCCCCCCCCCC
Confidence            457899999 999997766 59999999999999999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=4.2e-07  Score=59.17  Aligned_cols=39  Identities=10%  Similarity=-0.158  Sum_probs=34.3

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ...++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         8 ~~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            8 TGEKPYKCDV-CHKSFRYGS-SLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCSEECSS-SCCEESSHH-HHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCeeCcc-cCcccCChH-HHHHHHHHhCCCCCCCCCCC
Confidence            3457899999 999997665 59999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=2.9e-07  Score=60.10  Aligned_cols=38  Identities=8%  Similarity=-0.074  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            9 STKSHQCHE-CGRGFTLKS-HLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSEECSS-SCCEESSHH-HHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCeECCc-CCCccCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            357899999 999997665 59999999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=2.4e-07  Score=59.76  Aligned_cols=38  Identities=11%  Similarity=-0.013  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         7 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            7 GEKPFGCSC-CEKAFSSKS-YLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SCCCEECSS-SSCEESSHH-HHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCccCCC-CCcccCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=3.1e-07  Score=59.83  Aligned_cols=38  Identities=11%  Similarity=-0.111  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            9 GEKPYECSI-CGKSFTKKS-QLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SCCEESSHH-HHHHHHHTTSSCCSCCSCCC
T ss_pred             CCcCcCCCC-CCcccCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            357899999 999997665 59999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.27  E-value=3e-07  Score=59.90  Aligned_cols=38  Identities=8%  Similarity=-0.107  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            9 GEKRYKCNE-CGKVFSRNS-QLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             TSCCEECSS-SCCEESSHH-HHHHHHTGGGCCCCCSSSCC
T ss_pred             CCcCcCCCC-CcchhCCHH-HHHHHHHhcCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=2.4e-07  Score=60.26  Aligned_cols=38  Identities=13%  Similarity=-0.069  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            9 GERPHKCNE-CGKSFIQSA-HLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SCCEESSHH-HHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCCeeCCC-CChhhCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            357899999 999997665 59999999999999999998

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=9.3e-08  Score=58.79  Aligned_cols=34  Identities=24%  Similarity=0.503  Sum_probs=30.4

Q ss_pred             hcCCCceeecCCCCcccCCCccccccccccCCCc
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      .|+++++|.|.+|++.|.....|..|+++|++|+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4788999999999999999999999999998875

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.27  E-value=2.8e-07  Score=60.06  Aligned_cols=38  Identities=8%  Similarity=-0.148  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            9 REKSHQCRE-CGEIFFQYV-SLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCCCEECTT-TCCEESSHH-HHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCCEEccc-cChhhCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=2.2e-07  Score=60.63  Aligned_cols=38  Identities=8%  Similarity=-0.057  Sum_probs=34.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            9 GEKPYKCVE-CGKGYKRRL-DLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             SCCSEECSS-SCCEESSHH-HHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCeECcc-cCchhCCHH-HHHHHHHHHcCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=3.6e-07  Score=59.38  Aligned_cols=38  Identities=8%  Similarity=-0.134  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            9 GEKPYVCDY-CGKAFGLSA-ELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SCCEESSHH-HHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCeECCC-CChhhCCHH-HHHHHHHhcCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999998

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=2.6e-07  Score=60.22  Aligned_cols=38  Identities=18%  Similarity=-0.059  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            9 GEKPYKCEK-CGKGYNSKF-NLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SCCSEEETT-TTEEESCHH-HHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCeECCC-CCCccCCHH-HHHHHHHhhCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=2.9e-07  Score=59.94  Aligned_cols=38  Identities=8%  Similarity=-0.107  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            9 GEKPYKCSE-CGKAFHRHT-HLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SCCEESSHH-HHHHHHHHHTCCCSSCSSCC
T ss_pred             CCcCeECCC-CCCeeCChH-HHHHHHHHcCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=2.9e-07  Score=59.92  Aligned_cols=38  Identities=11%  Similarity=0.017  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            9 GENPYECHE-CGKAFSRKY-QLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSS-SCCEESSHH-HHHHHHHHHTTSCCSCSSCC
T ss_pred             CCcCcCCCC-CCcccCcHH-HHHHHHHHcCCCCCCCCCCC
Confidence            357899999 999997665 59999999999999999988

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=2.6e-07  Score=60.43  Aligned_cols=38  Identities=11%  Similarity=-0.007  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            9 GEKPYKCME-CGKAFGDNS-SCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCSSSBTT-TTBCCSSHH-HHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCcCCCC-CCchhCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=2.5e-07  Score=60.30  Aligned_cols=38  Identities=8%  Similarity=-0.096  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            9 GEKPYGCNE-CGKTFSQKS-ILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEEETT-TTEEESSHH-HHHHHHHHHSSCCCSSSCCC
T ss_pred             CCcCeECCC-CCcccCchH-HHHHHHHHcCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999998

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.24  E-value=2.6e-07  Score=74.41  Aligned_cols=57  Identities=11%  Similarity=0.302  Sum_probs=50.3

Q ss_pred             cCccccCc-cCCccccCCchhHHHHh-hhcCCCceeecCC--CCcccCCCccccccccccCC
Q 043134           64 LNLIDCFK-STDSSQDSLENNDIHRQ-GNETEPRVFSCNY--CQRKFYSSQALGGHQNAHKR  121 (279)
Q Consensus        64 ~nlf~C~e-~CGksFss~ss~L~~Hq-r~HtgeKPfsC~~--CgKsFssssaL~~Hqr~Htg  121 (279)
                      .++|.|.. .|++.|..... |..|+ ++|+++++|.|.+  |++.|.....|..|+++|.|
T Consensus        95 ~~~~~C~~~~C~~~f~~~~~-L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           95 EKPYMCEHEGCSKAFSNASD-RAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCCEECCSTTCCCEESSSST-THHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCeeCCCCCCCCccCCHHH-HHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            46799982 39999977764 99998 8999999999999  99999999999999998864

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=3.3e-07  Score=59.71  Aligned_cols=38  Identities=5%  Similarity=-0.140  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            9 GEKPYKCNE-CGKVFTQNS-HLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSEECSS-SCCEESSHH-HHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCEeCCc-CCCccCCHH-HHHHHHHHHCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=2.7e-07  Score=60.14  Aligned_cols=38  Identities=8%  Similarity=-0.080  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            9 GVKPYMCNE-CGKAFSVYS-SLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SCCEESCHH-HHHHHHHHHHCCSCCSCCCC
T ss_pred             CCcCeECCC-CCchhCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            357899999 999996665 59999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=4.1e-07  Score=59.22  Aligned_cols=38  Identities=13%  Similarity=-0.038  Sum_probs=33.7

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            9 GEKPYICAE-CGKAFTIRS-NLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSS-SCCEESSHH-HHHHHHHHTSCCCCSSCSCC
T ss_pred             CCcCeECCC-CChhhCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=4.8e-07  Score=58.89  Aligned_cols=38  Identities=8%  Similarity=-0.052  Sum_probs=33.7

Q ss_pred             CcCccccCccCCccccCCchhHHHHhh-hcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQG-NETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr-~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|++ +|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            9 GKKPYECIE-CGKAFIQNT-SLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCSBCCSS-SCCCBSSHH-HHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCCEECCc-cCchhCChH-HHHHHhHhhcCCCCCCCCCCC
Confidence            357899999 999997665 5999999 9999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=3.9e-07  Score=59.32  Aligned_cols=38  Identities=8%  Similarity=-0.103  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            9 GEKPFKCEE-CGKRFTQNS-QLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEEETT-TTEEESSHH-HHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCeeCCC-CCcccCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999988

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=2.4e-07  Score=60.47  Aligned_cols=38  Identities=8%  Similarity=-0.116  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSE-CGKSFSGSY-RLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSS-SCCCCSSHH-HHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCeeCCC-CCcccCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            457899999 999997665 59999999999999999998

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.23  E-value=1.4e-07  Score=62.96  Aligned_cols=36  Identities=19%  Similarity=0.482  Sum_probs=30.1

Q ss_pred             hcCCCceeecCCCCcccCCCcccccccc-ccCCCchh
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQN-AHKRERTL  125 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr-~HtgERpy  125 (279)
                      +|++++||.|.+|++.|.....|..|++ +|+++..-
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            4889999999999999999999999999 99987544

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.22  E-value=1.6e-07  Score=62.30  Aligned_cols=39  Identities=23%  Similarity=0.473  Sum_probs=34.4

Q ss_pred             HHHhhhcCCCceeecC--CCCcccCCCccccccccccCCCc
Q 043134           85 IHRQGNETEPRVFSCN--YCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        85 ~~Hqr~HtgeKPfsC~--~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      ..|...|++++||.|.  .|++.|.....|..|+++|+++|
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3445679999999996  79999999999999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=1.4e-07  Score=58.24  Aligned_cols=34  Identities=26%  Similarity=0.711  Sum_probs=30.0

Q ss_pred             hcCCCceeecCCCCcccCCCccccccccccCCCc
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      .|++++||.|.+|++.|.....|..|+++|+++|
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            3678899999999999999999999999998774

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=2.9e-07  Score=60.09  Aligned_cols=38  Identities=5%  Similarity=-0.079  Sum_probs=33.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. ||+.|.... .|..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            9 GERPYGCNE-CGKNFGRHS-HLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCEECSS-SCCEESSHH-HHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCEEccc-cCcccCCHH-HHHHHHHHHcCCCCCCCCCC
Confidence            356899999 999997665 59999999999999999988

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.21  E-value=1.6e-07  Score=70.35  Aligned_cols=39  Identities=23%  Similarity=0.240  Sum_probs=32.5

Q ss_pred             cCCCceeecCC--CCcccCCCccccccc-cccCCCchhhhhc
Q 043134           91 ETEPRVFSCNY--CQRKFYSSQALGGHQ-NAHKRERTLAKRG  129 (279)
Q Consensus        91 HtgeKPfsC~~--CgKsFssssaL~~Hq-r~HtgERpy~kr~  129 (279)
                      ++++|||+|.+  |+|.|.+...|..|+ ++|++||||..-.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            56889999975  999999999999997 6899999886543

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=3.1e-07  Score=59.85  Aligned_cols=38  Identities=13%  Similarity=-0.067  Sum_probs=33.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            9 GERPYICTV-CGKAFTDRS-NLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECTT-TCCEESSHH-HHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCcCCCC-CCchhCCHH-HHHHHHHhcCCCCCCCCCCC
Confidence            357899999 999997665 59999999999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=5.1e-07  Score=58.76  Aligned_cols=38  Identities=11%  Similarity=-0.042  Sum_probs=33.5

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            9 GEKPYRCAE-CGKAFTDRS-NLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SCCEESSHH-HHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCeECCC-CCchhCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            357899999 999997665 59999999999999999876

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.21  E-value=1.8e-07  Score=61.94  Aligned_cols=38  Identities=18%  Similarity=0.422  Sum_probs=35.3

Q ss_pred             hcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|..
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSS   43 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCS
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccC
Confidence            47889999999999999999999999999999999864

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=1.4e-07  Score=71.81  Aligned_cols=46  Identities=15%  Similarity=0.148  Sum_probs=41.9

Q ss_pred             hHHHHhhhcCCCceeecCCCCcccC-CCccccccccccCC-Cchhhhh
Q 043134           83 NDIHRQGNETEPRVFSCNYCQRKFY-SSQALGGHQNAHKR-ERTLAKR  128 (279)
Q Consensus        83 ~L~~Hqr~HtgeKPfsC~~CgKsFs-sssaL~~Hqr~Htg-ERpy~kr  128 (279)
                      .+..|+++|+++++|.|.+|++.|. ....|..|+++|.+ +++|...
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~   58 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQ   58 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCS
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECC
Confidence            4788999999999999999999999 99999999999988 8877654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=1.7e-07  Score=61.20  Aligned_cols=34  Identities=15%  Similarity=0.252  Sum_probs=30.5

Q ss_pred             hcCCCceeecCC--CCcccCCCccccccccccCCCc
Q 043134           90 NETEPRVFSCNY--CQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        90 ~HtgeKPfsC~~--CgKsFssssaL~~Hqr~HtgER  123 (279)
                      .+++++||+|.+  |++.|.....|..|+++|+++.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            367899999986  9999999999999999999863

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=7.1e-07  Score=58.17  Aligned_cols=38  Identities=5%  Similarity=-0.141  Sum_probs=33.4

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            9 GEKPFKCKE-CGKAFRQNI-HLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSS-SCCEESSHH-HHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCEECCc-CCchhCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            456899999 999997665 59999999999999999876

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.12  E-value=1.5e-06  Score=56.65  Aligned_cols=38  Identities=3%  Similarity=-0.106  Sum_probs=33.7

Q ss_pred             CcCccccC--ccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           63 ELNLIDCF--KSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ..++|.|.  . |++.|.... .|..|+++|++++||.|..|
T Consensus         9 ~~k~~~C~~~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            9 GEKPFACTWPG-CGWRFSRSD-ELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCEECCSSS-CCCEESSHH-HHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCeECCCCC-CCCccCCHH-HHHHHHHHhCCCCCCCCCCC
Confidence            45789998  8 999997665 59999999999999999988

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.09  E-value=8.2e-07  Score=67.67  Aligned_cols=53  Identities=13%  Similarity=0.009  Sum_probs=35.7

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      .++|.|.. |++.|.... .|..|+++|++++||.|..|.    ....|..|+++|.+.
T Consensus        23 ~kpy~C~~-C~k~F~~~~-~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           23 NSTYQCKH-CDSKLQSTA-ELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CSCEECSS-SCCEESSHH-HHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             CCCCcCCC-CCCEeCCHH-HHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccccc
Confidence            45677777 777775544 477777777777777776554    345566677766553

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.08  E-value=3e-07  Score=57.52  Aligned_cols=34  Identities=21%  Similarity=0.433  Sum_probs=30.6

Q ss_pred             hcCCCceeecCC--CCcccCCCccccccccccCCCc
Q 043134           90 NETEPRVFSCNY--CQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        90 ~HtgeKPfsC~~--CgKsFssssaL~~Hqr~HtgER  123 (279)
                      .|++++||.|.+  |++.|.....|..|+++|+++|
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            378899999995  9999999999999999998875

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.07  E-value=2.6e-06  Score=55.39  Aligned_cols=37  Identities=5%  Similarity=-0.078  Sum_probs=32.4

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            9 GEKPYECDV-CRKAFSHHA-SLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSSSCBCTT-TCCBCSSSH-HHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCC-cCchhCCHH-HHHHHHHHhCCCCCCCCCC
Confidence            457899999 999997766 5999999999999999963

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=5e-07  Score=52.82  Aligned_cols=30  Identities=33%  Similarity=0.600  Sum_probs=26.6

Q ss_pred             CceeecCCCCcccCCCccccccccccCCCc
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            478999999999999999999999998764

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.06  E-value=3.9e-07  Score=65.05  Aligned_cols=41  Identities=24%  Similarity=0.422  Sum_probs=37.4

Q ss_pred             hhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           88 QGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        88 qr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .++|+++++|.|.+|++.|.....|..|+++|.++++|...
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~   46 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCL   46 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECC
Confidence            46799999999999999999999999999999999887654

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.05  E-value=1.6e-06  Score=55.84  Aligned_cols=37  Identities=5%  Similarity=-0.121  Sum_probs=32.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.+
T Consensus         7 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            7 GNGAFFCNE-CDCRFSEEA-SLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SSCCBCCSS-SCCCBSSHH-HHHHHHHHHTCTTCSSSCC
T ss_pred             CCCCEECCC-CCCeeCChH-HHHHHHHhhCCCCCccCCC
Confidence            457899999 999997665 5999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=2.1e-06  Score=55.79  Aligned_cols=37  Identities=8%  Similarity=0.008  Sum_probs=32.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            9 GEKPYKCNE-CGKVFTQNS-HLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCBCSS-SCCBCSSHH-HHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCeECCC-CCcccCCHH-HHHHHHHhhCCCCCCCCCC
Confidence            357899999 999997665 5999999999999999974

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.05  E-value=1.3e-06  Score=62.64  Aligned_cols=43  Identities=9%  Similarity=0.128  Sum_probs=36.8

Q ss_pred             cCccccCc-cCCccccCCchhHHHHhhhcCCCceeecCCCCcccC
Q 043134           64 LNLIDCFK-STDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFY  107 (279)
Q Consensus        64 ~nlf~C~e-~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFs  107 (279)
                      .++|.|.. .|++.|.... .|..|+++|++++||.|.+|++.|.
T Consensus        36 ~~~~~C~~~~C~k~f~~~~-~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           36 QKSFSCPEPACGKSFNFKK-HLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CCCEECSCTTTCCEESSHH-HHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCeECCCCCCcCccCCHH-HHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            35788973 4999997665 5999999999999999999999984

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.31  E-value=5.9e-07  Score=52.45  Aligned_cols=29  Identities=24%  Similarity=0.528  Sum_probs=25.8

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCc
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +||.|.+|++.|.....|..|+++|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            57999999999999999999999998764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.04  E-value=1.8e-07  Score=71.39  Aligned_cols=45  Identities=24%  Similarity=0.436  Sum_probs=40.7

Q ss_pred             HHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhhc
Q 043134           85 IHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRG  129 (279)
Q Consensus        85 ~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr~  129 (279)
                      ..|.++|++++||.|.+|++.|.....|..|+++|++++||....
T Consensus        14 ~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~   58 (88)
T 1x6f_A           14 ILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKR   58 (88)
T ss_dssp             CCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCC
T ss_pred             eccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccch
Confidence            445678999999999999999999999999999999999998754

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.04  E-value=2.4e-06  Score=55.48  Aligned_cols=37  Identities=8%  Similarity=-0.055  Sum_probs=32.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            9 GGKPYQCNE-CGKAFSQTS-KLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSCSSSCCS-SCCCCSSHH-HHHHHGGGGCCCCCCCCCC
T ss_pred             CCCCeECCC-CCcccCCHH-HHHHHHHHcCCCCCCCCCC
Confidence            457899999 999997665 5999999999999999974

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.03  E-value=3e-07  Score=66.31  Aligned_cols=44  Identities=14%  Similarity=0.277  Sum_probs=38.0

Q ss_pred             HHHHhhhcCCCceeecCCCCcccCCCcccccccc-ccCCC-chhhh
Q 043134           84 DIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQN-AHKRE-RTLAK  127 (279)
Q Consensus        84 L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr-~HtgE-Rpy~k  127 (279)
                      +.+|+++|++++||.|.+|++.|.....|..|++ .|.++ ++|..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C   48 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHC   48 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEEC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCC
Confidence            4568999999999999999999999999999997 68764 56654

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=1e-06  Score=64.80  Aligned_cols=55  Identities=22%  Similarity=0.274  Sum_probs=48.4

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      ..+++.|.. |++.|.  ...|..|+ .|.+++|+.|..|++.|. ...|..|+++|.++
T Consensus        14 ~~r~~~C~~-C~~~~~--~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A           14 PLRLAVCQH-CDLELS--ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCCEECSS-SCCEEC--HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             CCcccCCcc-cChHhh--HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            457899999 999994  44699998 899999999999999987 58999999999876

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=2.3e-06  Score=55.57  Aligned_cols=37  Identities=19%  Similarity=-0.018  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            9 GENPFICSE-CGKVFTHKT-NLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCTT-TCCBCSSHH-HHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCEECCc-cCcccCCHH-HHHHHHHHhCCCCCCCCCC
Confidence            457899999 999997665 5999999999999999974

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.03  E-value=5.9e-07  Score=52.20  Aligned_cols=30  Identities=23%  Similarity=0.652  Sum_probs=24.0

Q ss_pred             CceeecCCCCcccCCCccccccccccCCCc
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            467888888888888888888888887764

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=2.5e-06  Score=55.52  Aligned_cols=37  Identities=8%  Similarity=-0.105  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            9 GEKCYKCDV-CGKEFSQSS-HLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCBCSS-SCCBCSSHH-HHHHHHTTTSSSCCCCTTC
T ss_pred             CCCCeECCC-CCcccCCHH-HHHHHHHHcCCCCCCCCCC
Confidence            357899999 999997665 5999999999999999974

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.02  E-value=3e-07  Score=64.63  Aligned_cols=42  Identities=17%  Similarity=0.171  Sum_probs=37.1

Q ss_pred             HHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           84 DIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        84 L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      |..|+++|++++||.|.+|++.|.....|.   ++|+++++|...
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~   43 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCT   43 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECC
Confidence            456889999999999999999999988886   889999998765

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=2.2e-06  Score=55.64  Aligned_cols=37  Identities=8%  Similarity=-0.027  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            9 GEKPYKCNE-CGKVFTQNS-HLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCTTCCSS-SCCCCSSHH-HHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCeECCC-CCcccCChh-HHHHHhHhcCCCCCCCCCC
Confidence            357899999 999997665 5999999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=2.2e-06  Score=55.89  Aligned_cols=37  Identities=5%  Similarity=-0.039  Sum_probs=32.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            9 GEKPYKCQV-CGKAFRVSS-HLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCSS-SCCBCSSHH-HHHHHTTTTTSCCSCTTSC
T ss_pred             CCcccCCCC-CCcccCcHH-HHHHHHHhcCCCCCCCCCC
Confidence            457899999 999997665 5999999999999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=2.6e-06  Score=55.18  Aligned_cols=38  Identities=13%  Similarity=0.043  Sum_probs=32.7

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ...++|.|.. |++.|.... .|..|+++|++++||.|.+
T Consensus         8 ~~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            8 TGQKPFECTH-CGKSFRAKG-NLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CSCCSEEETT-TTEEESSHH-HHHHHHTTTSSCCCCCSCC
T ss_pred             CCCcCccCCC-CCCccCChH-HHHHHHHHhCCCCCCCCCC
Confidence            3457899999 999997665 5999999999999999964

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.02  E-value=8.6e-07  Score=51.47  Aligned_cols=29  Identities=28%  Similarity=0.551  Sum_probs=23.2

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCc
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            57888888888888888888888887764

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=2.3e-06  Score=55.47  Aligned_cols=37  Identities=8%  Similarity=-0.149  Sum_probs=32.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            9 GEKPYICNE-CGKSFIQKS-HLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECSS-SCCEESSHH-HHHHHGGGTSSCCSSCCCC
T ss_pred             CCcCEECCC-CChhhCChH-HHHHHHHhcCCCCCcCCCC
Confidence            357899999 999997665 5999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=2.5e-06  Score=55.26  Aligned_cols=37  Identities=11%  Similarity=-0.128  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            9 GEKPYECSD-CGKSFIKKS-QLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             SCCSSCCSS-SCCCCSSHH-HHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCcCCCC-CCchhCCHH-HHHHHHHHhCCCCCCCCCC
Confidence            356899999 999997665 5999999999999999974

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=3.4e-06  Score=54.97  Aligned_cols=37  Identities=11%  Similarity=-0.111  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            9 GERGHRCSD-CGKFFLQAS-NFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCSS-SCCCCSSHH-HHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCcCCCC-CCCeeCChH-HHHHHHHHhCCCCCCCCCC
Confidence            457899999 999997665 5999999999999999963

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.00  E-value=2.3e-06  Score=55.68  Aligned_cols=37  Identities=11%  Similarity=-0.023  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            9 GERHYECSE-CGKAFARKS-TLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSS-SCCEESSHH-HHHHHHTTTSCCCCCSSCC
T ss_pred             CCCCeECCc-CCcccCCHH-HHHHHHHHhCCCCCCCCCC
Confidence            357899999 999997665 5999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=2e-06  Score=55.94  Aligned_cols=37  Identities=8%  Similarity=0.067  Sum_probs=32.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            9 GQRPYECIE-CGKAFKTKS-SLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSEECSS-SCCEESSHH-HHHHHHHHHSSSSCCCCCC
T ss_pred             CCcCcCCCC-CCCccCCHH-HHHHHHHhcCCCCCCCCCC
Confidence            457899999 999997665 5999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.00  E-value=3e-06  Score=55.10  Aligned_cols=37  Identities=8%  Similarity=-0.080  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            9 GEKPFQCEE-CGKRFTQNS-HLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSBCCSS-SCCCBSSHH-HHHHHGGGGTTCCCSSCCC
T ss_pred             CCcCCCCCC-CCcccCCHH-HHHHHHHhcCCCCCCCCCC
Confidence            357899999 999997665 5999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=2.4e-06  Score=54.12  Aligned_cols=35  Identities=11%  Similarity=-0.015  Sum_probs=30.9

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeec
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSC   99 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC   99 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|
T Consensus         7 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQE-CGKSFRQKG-SLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCEECSS-SCCEESSHH-HHHHHGGGCCCCSCSCC
T ss_pred             CCCCeECCC-CCCCcCCHH-HHHHHHHHhCCCCCcCC
Confidence            457899999 999997665 59999999999999988

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.00  E-value=2.3e-06  Score=55.45  Aligned_cols=37  Identities=14%  Similarity=0.091  Sum_probs=32.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            9 GEKPFECSE-CQKAFNTKS-NLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSS-SCCEESSHH-HHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCcCCCC-CCcccCCHH-HHHHHHHHhCCCCCCCCCC
Confidence            457899999 999997665 5999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.99  E-value=2.4e-06  Score=55.56  Aligned_cols=37  Identities=11%  Similarity=0.003  Sum_probs=32.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            9 GKKLFKCNE-CKKTFTQSS-SLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCBCTT-TCCBCSSHH-HHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCEECCc-cCcccCCHH-HHHHHHHHcCCCCCCCCCC
Confidence            457899999 999997665 5999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.98  E-value=3e-06  Score=55.15  Aligned_cols=37  Identities=8%  Similarity=-0.025  Sum_probs=32.0

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            9 GKKPYECKE-CRKTFIQIG-HLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CSCSCCCSS-SCCCCSSHH-HHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCC-cCchhCCHH-HHHHHHHHhCCCCCCCCCC
Confidence            356899999 999997655 5999999999999999963

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.98  E-value=3.2e-06  Score=53.54  Aligned_cols=36  Identities=11%  Similarity=-0.002  Sum_probs=31.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.
T Consensus         7 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            7 GEKPYSCAE-CKETFSDNN-RLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCCSCBCTT-TCCBCSSHH-HHHHHHHHTSCCSSCCCC
T ss_pred             CCCCeECCC-CCCccCCHH-HHHHHHHHhCCCCCCCCC
Confidence            346899999 999997665 599999999999999984

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=97.98  E-value=2.8e-06  Score=53.94  Aligned_cols=36  Identities=14%  Similarity=0.086  Sum_probs=31.4

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.
T Consensus         7 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            7 GENPYECSE-CGKAFNRKD-QLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SCCSEECSS-SCCEESSHH-HHHHHHGGGCCCCSCCCC
T ss_pred             CCCCccCCC-cChhhCCHH-HHHHHHHhcCCCCCCCCC
Confidence            356899999 999997665 599999999999999984

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=2.5e-06  Score=54.96  Aligned_cols=36  Identities=11%  Similarity=-0.050  Sum_probs=31.5

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            9 AKTTSECQE-CGKIFRHSS-LLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SSCCCCCTT-TCCCCSSHH-HHHHHHHHHTTSCCCCCC
T ss_pred             CCcCeECCC-CCcccCCHH-HHHHHHHHHCCCCCCCCC
Confidence            356899999 999997665 599999999999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=3e-06  Score=54.21  Aligned_cols=36  Identities=14%  Similarity=-0.014  Sum_probs=31.5

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            9 GMKPYVCNE-CGKAFRSKS-YLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSCCTT-TCCCCSSHH-HHHHHHTTTCCSSSSCCC
T ss_pred             CCcCeECCC-CCCccCCHH-HHHHHhhhcCCCCCCCCC
Confidence            356899999 999997665 599999999999999985

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.97  E-value=9.3e-07  Score=60.04  Aligned_cols=39  Identities=23%  Similarity=0.486  Sum_probs=35.7

Q ss_pred             hcCCCceeecCCCCcccCCCcccccccc-ccCCCchhhhh
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQN-AHKRERTLAKR  128 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr-~HtgERpy~kr  128 (279)
                      .|++++||.|.+|++.|.....|..|++ +|+++++|...
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~   45 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   45 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCC
Confidence            4788999999999999999999999997 99999988754

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=2.5e-06  Score=55.30  Aligned_cols=37  Identities=5%  Similarity=-0.047  Sum_probs=32.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            9 GEKPYKCNE-CGKAFRARS-SLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECTT-SCCEESSHH-HHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCeeccc-cCChhcCHH-HHHHHHHHcCCCCCCCCCC
Confidence            357899999 999997665 5999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=2.9e-06  Score=55.10  Aligned_cols=37  Identities=5%  Similarity=-0.127  Sum_probs=32.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~~~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            9 GERHYECSE-CGKAFIQKS-TLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SCCCEECSS-SCCEESSHH-HHHHHHGGGCSCCCCSCCC
T ss_pred             CCCCCCCCC-CCcccCCHH-HHHHHHhHhCCCCCCCCCC
Confidence            356899999 999997665 5999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=3.1e-06  Score=54.93  Aligned_cols=37  Identities=11%  Similarity=-0.054  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            9 GEKPYKCNE-CGKAFRAHS-NLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCTT-TTCCCSSHH-HHHHHHTTTCCSCCSSCCC
T ss_pred             CCCCeECCc-CChhhCCHH-HHHHHHHHhCCCCCCCCCC
Confidence            357899999 999997665 5999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=97.96  E-value=2.3e-06  Score=55.69  Aligned_cols=37  Identities=11%  Similarity=-0.032  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            9 GEKPFECAE-CGKSFSISS-QLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSS-SSCEESSHH-HHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCEECCC-CCcccCCHH-HHHHHHHHhCCCCCCCCCC
Confidence            356899999 999997665 5999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.96  E-value=2.7e-06  Score=55.25  Aligned_cols=37  Identities=8%  Similarity=-0.030  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.
T Consensus         9 ~~~~~~C~~-C~k~F~~~~-~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            9 GEKPYECKV-CSKAFTQKA-HLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECSS-SCCEESSHH-HHHHHHHHHCCCCCCCSCC
T ss_pred             CCcCeECCC-CCcccCCHH-HHHHHHHHhCCCCCCCCCC
Confidence            356899999 999997665 5999999999999999974

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=97.96  E-value=1.5e-07  Score=74.12  Aligned_cols=60  Identities=17%  Similarity=0.069  Sum_probs=48.8

Q ss_pred             cCccccCccCCcccc-----CCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhh
Q 043134           64 LNLIDCFKSTDSSQD-----SLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        64 ~nlf~C~e~CGksFs-----s~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      ...+.|.. |++.|.     .....|..|+ .|++++||.|.+|++.|.....|..|+++|  ++||..
T Consensus        39 ~~~~~c~~-~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C  103 (129)
T 2wbt_A           39 QKRLIRAI-VKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVC  103 (129)
T ss_dssp             HHHHHHHH-HHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBC
T ss_pred             hCcccchh-hhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCC
Confidence            34567888 888776     4555577776 688999999999999999999999999999  777643

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.96  E-value=7.6e-07  Score=68.36  Aligned_cols=45  Identities=13%  Similarity=0.128  Sum_probs=41.1

Q ss_pred             hHHHHhhhcCCCceeecCCCCccc-CCCccccccccccCCCchhhhh
Q 043134           83 NDIHRQGNETEPRVFSCNYCQRKF-YSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        83 ~L~~Hqr~HtgeKPfsC~~CgKsF-ssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .+..|+++|+++++|.|++|++.| .....|..|+++| ++++|...
T Consensus        21 ~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~   66 (96)
T 2ctd_A           21 LEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCH   66 (96)
T ss_dssp             HHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCS
T ss_pred             HHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECC
Confidence            588999999999999999999999 9999999999999 98887643

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=97.96  E-value=3e-06  Score=53.72  Aligned_cols=35  Identities=11%  Similarity=-0.124  Sum_probs=30.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeec
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSC   99 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC   99 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|
T Consensus         8 ~~~~~~C~~-C~k~f~~~~-~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            8 GETPYLCGQ-CGKSFTQRG-SLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SSCCEECSS-SCCEESSHH-HHHHHHHHTTCCCCCCC
T ss_pred             CCCCeECCC-CCcccCCHH-HHHHHhhhcCCCCCCCC
Confidence            356899999 999997665 59999999999999998

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.95  E-value=3.1e-06  Score=54.78  Aligned_cols=37  Identities=11%  Similarity=-0.058  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            9 GEKPYRCGE-CGKAFAQKA-NLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSS-SCCEESSHH-HHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCeECCC-CCCccCCHH-HHHHHHHHcCCCCCCCCCC
Confidence            356899999 999997665 5999999999999999974

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.95  E-value=3.4e-06  Score=53.45  Aligned_cols=35  Identities=11%  Similarity=-0.093  Sum_probs=30.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeec
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSC   99 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC   99 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|
T Consensus         8 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            8 GEKPYRCDQ-CGKAFSQKG-SLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             SCCSBCCTT-TTCCBSSHH-HHHTTGGGTSCCSCCCC
T ss_pred             CCCCeeCCC-ccchhCCHH-HHHHHHHHhCCCCCCCC
Confidence            356899999 999997665 59999999999999988

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=1.7e-06  Score=51.70  Aligned_cols=30  Identities=27%  Similarity=0.643  Sum_probs=23.8

Q ss_pred             CceeecC--CCCcccCCCccccccccccCCCc
Q 043134           94 PRVFSCN--YCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        94 eKPfsC~--~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4678888  78888888888888888887764

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=4.2e-06  Score=54.40  Aligned_cols=37  Identities=8%  Similarity=0.010  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCC-CceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETE-PRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~Htg-eKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++ ++||.|+.
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            9 KEKCFKCNK-CEKTFSCSK-YLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CSCCEECSS-SCCEESSSH-HHHHHHTTCCSCCTTSSSCC
T ss_pred             CCCCEECcC-CCCcCCCHH-HHHHHHHHcCCCCCCCCCCC
Confidence            356899999 999997766 59999999999 99999963

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=3.1e-06  Score=53.86  Aligned_cols=35  Identities=11%  Similarity=-0.102  Sum_probs=30.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeec
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSC   99 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC   99 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|
T Consensus         8 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            8 GEKPYPCEI-CGTRFRHLQ-TLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSCCBCCSS-SCCCBSSHH-HHHHHTTTTSCCSSTTC
T ss_pred             CCCCEECCC-CCCccCCHH-HHHHHHHhcCCCCCCCC
Confidence            457899999 999997665 59999999999999987

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.93  E-value=3.3e-06  Score=54.06  Aligned_cols=36  Identities=14%  Similarity=0.071  Sum_probs=31.4

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            9 GEKPYECNE-CQKAFNTKS-NLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCCSEECTT-TCCEESCHH-HHHHHHHHTTTSSCSCCC
T ss_pred             CCCCeECCC-CCcccCCHh-HHHHHHHHhCCCCCCCCC
Confidence            356899999 999997665 599999999999999985

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.93  E-value=4.7e-06  Score=53.55  Aligned_cols=36  Identities=14%  Similarity=0.072  Sum_probs=31.6

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            9 GENPFKCSK-CDRVFTQRN-YLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCCSEECSS-SSCEESSSH-HHHHHHHHCCCCCSSCCC
T ss_pred             CCCCeECCC-CCchhCCHH-HHHHHhHhcCCCCCCCCC
Confidence            356899999 999997766 599999999999999984

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.92  E-value=1.2e-06  Score=50.53  Aligned_cols=29  Identities=24%  Similarity=0.504  Sum_probs=21.9

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCc
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46778888888888788888877777653

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.92  E-value=3.5e-06  Score=54.17  Aligned_cols=36  Identities=14%  Similarity=0.100  Sum_probs=31.4

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            9 TRKRYECSK-CQATFNLRK-HLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSSEECTT-TCCEESCHH-HHHHHGGGGCCCCCTTCC
T ss_pred             CCCCeECCC-CCCccCCHH-HHHHHHHHcCCCCCcCCC
Confidence            356899999 999997665 599999999999999985

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.91  E-value=3.2e-06  Score=54.98  Aligned_cols=37  Identities=11%  Similarity=-0.060  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            9 GEKPYKCSD-CGKAFTRKS-GLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             SCCCEECSS-SCCEESSHH-HHHHHHHHHTCCCBTTTBC
T ss_pred             CCCCEECcc-cCCccCCHh-HHHHHHHHcCCCCCCCCCC
Confidence            457899999 999997665 5999999999999999973

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.90  E-value=2.4e-06  Score=55.30  Aligned_cols=37  Identities=8%  Similarity=-0.120  Sum_probs=32.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~~~~~C~~-C~k~f~~~~-~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            9 GEKPYNCEE-CGKAFIHDS-QLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECTT-TCCEESSHH-HHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCccCCC-CCCCcCCHH-HHHHHHHhcCCCCCCCCCC
Confidence            356899999 999997665 5999999999999999974

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.90  E-value=4.2e-06  Score=54.16  Aligned_cols=37  Identities=8%  Similarity=-0.039  Sum_probs=32.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|..
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            9 GEKPYECNQ-CGKAFSVRS-SLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSEETT-TTEECSSHH-HHHHHHTTSCCCCCCCSCC
T ss_pred             CCCCeECCC-CChhhCCHH-HHHHHHHHhCCCCCCCCCC
Confidence            357899999 999997665 5999999999999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.90  E-value=3.8e-06  Score=53.89  Aligned_cols=36  Identities=11%  Similarity=0.071  Sum_probs=31.4

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            9 GENPYECCE-CGKVFSRKD-QLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSCEETT-TTEECSSHH-HHHHHHTTSSSSCSCCCC
T ss_pred             CCcCeeCCC-CCCccCCHH-HHHHHHHHcCCCCCCCCC
Confidence            356899999 999997665 599999999999999985

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.89  E-value=1.2e-06  Score=50.72  Aligned_cols=29  Identities=34%  Similarity=0.722  Sum_probs=20.3

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCc
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46777777777777777777777776653

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.88  E-value=1.6e-06  Score=63.30  Aligned_cols=33  Identities=21%  Similarity=0.486  Sum_probs=28.8

Q ss_pred             hcCCCceeecCCCCcccCCCccccccccccCCC
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      .|.++|||+|.+|+|.|.....|..|+++|+++
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            477889999999999999999999999999875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=97.87  E-value=1.7e-06  Score=62.34  Aligned_cols=51  Identities=10%  Similarity=0.036  Sum_probs=44.9

Q ss_pred             Ccccc--CccCCccccCCchhHHHHhhhcCCCceeecCC---CCcccCCCccccccccccC
Q 043134           65 NLIDC--FKSTDSSQDSLENNDIHRQGNETEPRVFSCNY---CQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        65 nlf~C--~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~---CgKsFssssaL~~Hqr~Ht  120 (279)
                      ++|.|  .. |++.|.... .|..|+++|++   |.|..   |++.|.....|..|+++|.
T Consensus        30 ~~~~C~~~~-C~~~f~~~~-~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           30 LPYECPHEG-CDKRFSLPS-RLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CCEECCSTT-CCCEESSHH-HHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCeeCCCCC-CcCccCCHH-HHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            56889  56 999997665 59999999998   99999   9999999999999998763

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.87  E-value=3.5e-06  Score=54.78  Aligned_cols=37  Identities=5%  Similarity=-0.149  Sum_probs=32.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            9 GEKPYSCNV-CGKAFVLSA-HLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCSEEETT-TTEEESSHH-HHHHHHHHHSSCCSSSCCC
T ss_pred             CCCCeECcc-cChhhCCHH-HHHHHHHHhCCCCCCCCCC
Confidence            457899999 999997665 5999999999999999974

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.87  E-value=2.6e-06  Score=49.71  Aligned_cols=29  Identities=28%  Similarity=0.607  Sum_probs=21.9

Q ss_pred             ceeecCCCCcccCCCcccccc-ccccCCCc
Q 043134           95 RVFSCNYCQRKFYSSQALGGH-QNAHKRER  123 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~H-qr~HtgER  123 (279)
                      +||.|..|++.|.....|..| +++|++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            467788888888888888888 67777664

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.86  E-value=4.3e-06  Score=53.73  Aligned_cols=36  Identities=11%  Similarity=0.021  Sum_probs=31.6

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.
T Consensus         9 ~~~~~~C~~-C~k~F~~~~-~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            9 DSKSYNCNE-CGKAFTRIF-HLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCEEETT-TTEEESSSH-HHHTTHHHHCCCCCCSCC
T ss_pred             CCCCeECcc-cCcccCCHH-HHHHHHHHhCCCCCCCCC
Confidence            357899999 999997766 599999999999999984

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=9.8e-07  Score=50.97  Aligned_cols=29  Identities=28%  Similarity=0.550  Sum_probs=22.4

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCc
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            46788888888888888888888877664

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.86  E-value=3.2e-06  Score=53.71  Aligned_cols=35  Identities=9%  Similarity=-0.164  Sum_probs=30.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeec
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSC   99 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC   99 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|
T Consensus         8 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            8 GEKPYKCET-CGARFVQVA-HLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             SSCSEECTT-TCCEESSHH-HHHHHTHHHHSCCSSCC
T ss_pred             CCCCEeCCC-cChhhCCHH-HHHHHHHHcCCCCCCCC
Confidence            356899999 999997665 59999999999999988

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.86  E-value=1.2e-06  Score=63.53  Aligned_cols=39  Identities=18%  Similarity=0.318  Sum_probs=35.1

Q ss_pred             HHHHhhhcCCCceeecCCCCcccCCCccccccccccCCC
Q 043134           84 DIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        84 L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      +..|+++|++++||.|.+|++.|.....|..|++.|..+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~   41 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   41 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence            567899999999999999999999999999999876554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.86  E-value=1.9e-06  Score=49.97  Aligned_cols=29  Identities=21%  Similarity=0.555  Sum_probs=20.4

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCc
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            36777777777777777777777776654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.85  E-value=2.1e-06  Score=60.66  Aligned_cols=39  Identities=21%  Similarity=0.275  Sum_probs=35.4

Q ss_pred             hcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|...
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   41 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCN   41 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCC
Confidence            478899999999999999999999999999999887654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.85  E-value=2.1e-06  Score=51.01  Aligned_cols=29  Identities=38%  Similarity=0.850  Sum_probs=21.8

Q ss_pred             ceeecC--CCCcccCCCccccccccccCCCc
Q 043134           95 RVFSCN--YCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        95 KPfsC~--~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            467776  78888887777888877777664

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.84  E-value=3.3e-06  Score=54.90  Aligned_cols=36  Identities=3%  Similarity=-0.092  Sum_probs=31.7

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|+
T Consensus         9 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            9 GERPFKCNE-CGKGFGRRS-HLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCCCSS-SCCCCSSHH-HHHHHHHHHHHTTCCCSC
T ss_pred             CCCCeECCC-CCcccCCHH-HHHHHHHHhCCCCCCCCC
Confidence            456899999 999997665 599999999999999996

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=97.84  E-value=1.2e-06  Score=60.99  Aligned_cols=41  Identities=12%  Similarity=0.306  Sum_probs=35.8

Q ss_pred             hhhcCCCceeecCCCCcccCCCccccccccc-c-CCCchhhhh
Q 043134           88 QGNETEPRVFSCNYCQRKFYSSQALGGHQNA-H-KRERTLAKR  128 (279)
Q Consensus        88 qr~HtgeKPfsC~~CgKsFssssaL~~Hqr~-H-tgERpy~kr  128 (279)
                      +++|++++||.|..|++.|.....|..|++. | +++++|...
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~   44 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCP   44 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECT
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECC
Confidence            4679999999999999999999999999998 7 688887654

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.81  E-value=4.6e-06  Score=54.09  Aligned_cols=36  Identities=3%  Similarity=-0.124  Sum_probs=31.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            9 GEKPFQCKE-CGMNFSWSC-SLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCSEECSS-SCCEESSSH-HHHHHHHHHHHSCCSSCS
T ss_pred             CCCCeeCcc-cChhhCCHH-HHHHHHHHhCCCCCCCCC
Confidence            357899999 999997766 599999999999999986

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.80  E-value=2.6e-06  Score=49.18  Aligned_cols=28  Identities=25%  Similarity=0.593  Sum_probs=21.5

Q ss_pred             CceeecCCCCcccCCCccccccccccCC
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHKR  121 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~Htg  121 (279)
                      ++||.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4678888888888888888888877753

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.78  E-value=9.2e-06  Score=52.35  Aligned_cols=36  Identities=8%  Similarity=-0.124  Sum_probs=31.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++||.|.
T Consensus         9 ~~k~~~C~~-C~k~F~~~~-~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            9 GEKPYECNE-CGKAFIWKS-LLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCSEECSS-SCCEESSHH-HHHHHHGGGSSCSCCCCC
T ss_pred             CCcCeECCC-CCcccCchH-HHHHHHhHhcCCCCCCCC
Confidence            457899999 999997665 599999999999999873

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.76  E-value=8.7e-06  Score=49.57  Aligned_cols=33  Identities=3%  Similarity=-0.237  Sum_probs=28.3

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeec
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSC   99 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC   99 (279)
                      ++|.|.. ||+.|.... .|..|+++|++++||.+
T Consensus         1 kp~~C~~-C~k~F~~~~-~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPE-CPKRFMRSD-HLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSS-SCCCCSSHH-HHHHHHHHHTTTCCCCC
T ss_pred             CcccCCC-CCchhCCHH-HHHHHHHHhCCCCCCCC
Confidence            3689999 999997655 59999999999999853

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=97.75  E-value=3e-06  Score=64.37  Aligned_cols=41  Identities=17%  Similarity=0.265  Sum_probs=37.1

Q ss_pred             hhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           88 QGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        88 qr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..++...++|.|++|++.|.....|..|+++|++++||...
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~   60 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCK   60 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECT
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCC
Confidence            35577889999999999999999999999999999998765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.75  E-value=4e-06  Score=47.83  Aligned_cols=27  Identities=37%  Similarity=0.822  Sum_probs=18.5

Q ss_pred             eeecCCCCcccCCCccccccccccCCC
Q 043134           96 VFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        96 PfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            467777777777777777777777653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.75  E-value=2.8e-06  Score=48.87  Aligned_cols=27  Identities=26%  Similarity=0.544  Sum_probs=20.7

Q ss_pred             CceeecCCCCcccCCCccccccccccC
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~Ht  120 (279)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            467888888888888888888877764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.73  E-value=2e-06  Score=61.90  Aligned_cols=38  Identities=16%  Similarity=0.266  Sum_probs=33.4

Q ss_pred             hcCCCceeecCCCCcccCCCccccccccccCC---Cchhhh
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKR---ERTLAK  127 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr~Htg---ERpy~k  127 (279)
                      .|++++||.|.+|++.|.....|..|+++|.+   +++|..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C   41 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPC   41 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEEC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCC
Confidence            48899999999999999999999999999986   566554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.91  E-value=4.4e-06  Score=47.56  Aligned_cols=26  Identities=27%  Similarity=0.703  Sum_probs=22.8

Q ss_pred             ceeecCCCCcccCCCccccccccccC
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~Ht  120 (279)
                      |||.|..|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            57899999999999999999998874

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=97.71  E-value=2.3e-06  Score=57.69  Aligned_cols=36  Identities=25%  Similarity=0.407  Sum_probs=29.9

Q ss_pred             CCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           93 EPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        93 geKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      |++||.|..|++.|.....|..|+++|+++++|...
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   36 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCE   36 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECS
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCC
Confidence            468999999999999999999999999999887754

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.71  E-value=3e-06  Score=49.05  Aligned_cols=27  Identities=19%  Similarity=0.445  Sum_probs=21.0

Q ss_pred             CceeecCCCCcccCCCccccccccccC
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~Ht  120 (279)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            467888888888888888888877764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.70  E-value=1.1e-05  Score=50.51  Aligned_cols=35  Identities=9%  Similarity=-0.166  Sum_probs=30.1

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCN  100 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~  100 (279)
                      .++|.|.. ||+.|.... .|..|+++|++++||.|.
T Consensus         4 ~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            4 PRSYTCSF-CKREFRSAQ-ALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             SSSEECTT-TCCEESSHH-HHHHHHHTTCCSCTTTTC
T ss_pred             CCceECCC-CCcccCCHH-HHHHHHHHcCCCccceec
Confidence            46799999 999997655 599999999999998763

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=97.61  E-value=6.4e-06  Score=58.74  Aligned_cols=40  Identities=20%  Similarity=0.424  Sum_probs=35.5

Q ss_pred             hhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           89 GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..++++++|.|..|++.|.....|..|+++|+++++|...
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~   49 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCN   49 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECT
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECC
Confidence            3577899999999999999999999999999999887654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.61  E-value=6.8e-06  Score=53.02  Aligned_cols=26  Identities=35%  Similarity=0.535  Sum_probs=19.3

Q ss_pred             cCCCceeecCCCCcccCCCccccccc
Q 043134           91 ETEPRVFSCNYCQRKFYSSQALGGHQ  116 (279)
Q Consensus        91 HtgeKPfsC~~CgKsFssssaL~~Hq  116 (279)
                      +.++|||.|++|+|.|.+.+.|..|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45677777777777777777777776

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.60  E-value=2.1e-05  Score=61.61  Aligned_cols=39  Identities=8%  Similarity=0.046  Sum_probs=34.1

Q ss_pred             cCccccCccCCccccCCchhHHHH-hhhcCCCceeecCCCCc
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHR-QGNETEPRVFSCNYCQR  104 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~H-qr~HtgeKPfsC~~CgK  104 (279)
                      .++|.|.. ||+.|.... .|..| +++|++++||.|..+.+
T Consensus        48 ekpf~C~~-Cgk~F~~~~-~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           48 NSSYVCVE-CNFLTKRYD-ALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             SCCEEETT-TTEEESSTH-HHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCcCCCC-CCcccCCHH-HHHHHHHHhcCCCCCeeCCcccC
Confidence            46899999 999997776 59999 89999999999998654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.56  E-value=7.9e-06  Score=58.71  Aligned_cols=40  Identities=25%  Similarity=0.499  Sum_probs=35.7

Q ss_pred             hhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           89 GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..+.++++|.|.+|++.|.....|..|+++|.++++|...
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   50 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCD   50 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECS
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCC
Confidence            4577899999999999999999999999999998887654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.55  E-value=6.7e-06  Score=57.56  Aligned_cols=37  Identities=14%  Similarity=0.002  Sum_probs=33.7

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      .++|.|.. |++.|..... |..|+++|++++||.|.+|
T Consensus        37 ~~~~~C~~-C~~~f~~~~~-l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           37 RKTPMCEK-CRKDSCQEAA-LNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSSCCCHH-HHHTCSCCCS-SCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCCCCC-CChhhcCHHH-HHHHHHhhcCCCCCCCCCC
Confidence            57899999 9999977764 9999999999999999998

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=97.55  E-value=7.7e-07  Score=65.74  Aligned_cols=53  Identities=4%  Similarity=-0.086  Sum_probs=46.2

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCcccccccccc
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~H  119 (279)
                      .++|.|.. |++.|.... .|..|+++|.+ ++|.|..|++.|.....|..|++.+
T Consensus        29 ~~~~~C~~-C~k~f~~~~-~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~   81 (88)
T 1llm_C           29 EKPFACDI-CGRKFARSD-ERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARL   81 (88)
T ss_dssp             CCCEECTT-TCCEESSHH-HHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCCC-CCCccCCHH-HHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHHH
Confidence            35799999 999997665 59999999885 8999999999999999999998643

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.53  E-value=8.3e-06  Score=49.22  Aligned_cols=31  Identities=3%  Similarity=-0.159  Sum_probs=27.0

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCcee
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVF   97 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPf   97 (279)
                      ++|.|.. ||+.|.... .|..|+++|++++||
T Consensus         1 kp~~C~~-C~k~f~~~~-~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPA-CPKRFMRSD-ALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSS-SCTTHHHHH-TTSSSTTSSSSSSSC
T ss_pred             CCCCCCC-CCcccCCHH-HHHHHHHHHccCCCC
Confidence            3689999 999997665 599999999999987

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=97.47  E-value=1.3e-05  Score=54.51  Aligned_cols=34  Identities=29%  Similarity=0.583  Sum_probs=30.9

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      +||.|..|++.|.....|..|+++|+++++|...
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   34 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCG   34 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECT
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCC
Confidence            5899999999999999999999999999887654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.34  E-value=8.6e-05  Score=55.53  Aligned_cols=38  Identities=8%  Similarity=-0.111  Sum_probs=31.7

Q ss_pred             CcCccccC--ccCCccccCCchhHHHHh-hhcCCCceeecCCC
Q 043134           63 ELNLIDCF--KSTDSSQDSLENNDIHRQ-GNETEPRVFSCNYC  102 (279)
Q Consensus        63 e~nlf~C~--e~CGksFss~ss~L~~Hq-r~HtgeKPfsC~~C  102 (279)
                      ..++|.|.  . |++.|.... .|..|+ ++|+++|||-|..-
T Consensus        24 GEKPYkC~~~~-CgKaFsr~s-~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           24 PYRPYRCVHQG-CFAAFTIQQ-NLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SSCSCBCCSTT-CCCBCSSHH-HHHHHHHHHSSSCCCCCCCSC
T ss_pred             CCCCeECCCCC-cChhHcCHH-HHHHHhhhhCCCCCCcccccc
Confidence            45899995  6 999996655 599997 79999999999763

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=97.32  E-value=6.8e-05  Score=50.46  Aligned_cols=34  Identities=6%  Similarity=-0.211  Sum_probs=29.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCceee
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFS   98 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfs   98 (279)
                      ..++|.|.. ||+.|.... .|..|+++|++++||.
T Consensus        21 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           21 SEQPATCPI-CYAVIRQSR-NLRRHLELRHFAKPGV   54 (54)
T ss_dssp             SSCCEECTT-TCCEESSHH-HHHHHHHHHTTTSCCC
T ss_pred             CCCCccCCC-CCcccCCHH-HHHHHHHHhccCCCCC
Confidence            346899999 999997665 5999999999999874

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.29  E-value=0.0001  Score=44.32  Aligned_cols=31  Identities=6%  Similarity=-0.287  Sum_probs=26.6

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCce
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRV   96 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKP   96 (279)
                      .++|.|.. |++.|.... .|..|+++|++++|
T Consensus         5 ~k~~~C~~-C~k~f~~~~-~L~~H~~~h~~~kp   35 (35)
T 2elx_A            5 SSGYVCAL-CLKKFVSSI-RLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCSEECSS-SCCEESSHH-HHHHHHHHTSCTTC
T ss_pred             CCCeECCC-CcchhCCHH-HHHHHHHHHcCCCC
Confidence            46799999 999997655 59999999999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.28  E-value=2.8e-05  Score=44.69  Aligned_cols=26  Identities=31%  Similarity=0.723  Sum_probs=19.0

Q ss_pred             ceeecC--CCCcccCCCccccccccccC
Q 043134           95 RVFSCN--YCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        95 KPfsC~--~CgKsFssssaL~~Hqr~Ht  120 (279)
                      +||.|.  .|++.|.....|..|+++|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            467777  77777777777777777765

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.26  E-value=0.00011  Score=44.31  Aligned_cols=31  Identities=13%  Similarity=-0.057  Sum_probs=26.7

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCce
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRV   96 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKP   96 (279)
                      .++|.|.. |++.|.... .|..|+++|++++|
T Consensus         5 ~k~~~C~~-C~k~f~~~~-~l~~H~~~H~~~~~   35 (35)
T 1srk_A            5 KRPFVCRI-CLSAFTTKA-NCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCEECSS-SCCEESSHH-HHHHHHGGGTSCCC
T ss_pred             CcCeeCCC-CCcccCCHH-HHHHHHHHcCCCCC
Confidence            46899999 999997665 59999999999875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=97.23  E-value=2.5e-05  Score=55.18  Aligned_cols=41  Identities=24%  Similarity=0.455  Sum_probs=36.4

Q ss_pred             hhhcCCCceeecC--CCCcccCCCccccccccccCCCchhhhh
Q 043134           88 QGNETEPRVFSCN--YCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        88 qr~HtgeKPfsC~--~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..+|+++++|.|.  .|++.|.....|..|+++|.++++|...
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~   53 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCR   53 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECT
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECC
Confidence            4568899999997  5999999999999999999999887654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.22  E-value=9.8e-05  Score=45.15  Aligned_cols=32  Identities=6%  Similarity=-0.159  Sum_probs=27.2

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCce
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRV   96 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKP   96 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++|
T Consensus         6 ~~k~~~C~~-C~k~f~~~~-~l~~H~~~h~~~kp   37 (37)
T 2elo_A            6 SGRSYSCPV-CEKSFSEDR-LIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCEETT-TTEECSSHH-HHHHHHHHHCSSCC
T ss_pred             CCCCcCCCC-CCCccCCHH-HHHHHHHHHcCCCC
Confidence            356899999 999997665 59999999999875

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=97.20  E-value=3.6e-05  Score=51.62  Aligned_cols=33  Identities=18%  Similarity=0.325  Sum_probs=30.2

Q ss_pred             eeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           96 VFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        96 PfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ||.|..|++.|.....|..|+++|+++++|...
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   33 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCT   33 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCC
Confidence            689999999999999999999999999887654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.17  E-value=0.00017  Score=41.26  Aligned_cols=29  Identities=3%  Similarity=-0.125  Sum_probs=24.6

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.. |++.|.... .|..|+++|++++
T Consensus         1 k~~~C~~-C~k~f~~~~-~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPE-CPKRFMRSD-HLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSS-SSCEESCSH-HHHHHHTGGGSCC
T ss_pred             CCccCCC-CCchhCCHH-HHHHHHHHhcCCC
Confidence            3689999 999997766 5999999998864

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.17  E-value=0.0001  Score=54.39  Aligned_cols=33  Identities=9%  Similarity=-0.007  Sum_probs=29.5

Q ss_pred             cccCccCCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           67 IDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        67 f~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      |.|.. |++.|.... .|..|+++|++++||.|..
T Consensus        63 ~~C~~-C~k~f~~~~-~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           63 EECPR-EGKSFKAKY-KLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             TTCSS-TTCCCSSHH-HHHHHHHHHHTCCCCSSCC
T ss_pred             cCCCC-CCcccCCHH-HHHHHHHhcCCCCCCCCCC
Confidence            89999 999997665 5999999999999999963

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.11  E-value=0.00024  Score=40.62  Aligned_cols=30  Identities=7%  Similarity=-0.010  Sum_probs=25.1

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCce
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRV   96 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKP   96 (279)
                      ++|.|.. |++.|.... .|..|+++|+++++
T Consensus         1 k~~~C~~-C~k~f~~~~-~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQY-CEFRSADSS-NLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSS-SSCCCSCSH-HHHHHHHHHTSSCC
T ss_pred             CCccCCC-CCCccCCHH-HHHHHHHHHccCCC
Confidence            3689999 999997666 59999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.09  E-value=0.00023  Score=40.40  Aligned_cols=29  Identities=10%  Similarity=0.002  Sum_probs=24.5

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.. |++.|.... .|..|+++|++++
T Consensus         1 k~~~C~~-C~~~f~~~~-~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPH-CDKKFNQVG-NLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSS-CCCCCCTTT-HHHHHHHHHHSCC
T ss_pred             CCCcCCC-CCcccCCHH-HHHHHHHHhccCC
Confidence            3689999 999997766 5999999998864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.08  E-value=0.00038  Score=41.02  Aligned_cols=29  Identities=14%  Similarity=0.098  Sum_probs=24.9

Q ss_pred             CccccC--ccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.  . |++.|.... .|..|+++|++++
T Consensus         2 k~~~C~~~~-C~k~f~~~~-~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPG-CDKAFVRNH-DLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTT-CCCCBSSSH-HHHHHHGGGTCCC
T ss_pred             CCCcCcCCC-CCCccCCHH-HHHHHHHHccCCC
Confidence            578999  8 999997766 5999999999874

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.08  E-value=0.00021  Score=40.79  Aligned_cols=29  Identities=10%  Similarity=0.025  Sum_probs=24.3

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.. |++.|.... .|..|+++|++++
T Consensus         1 k~~~C~~-C~~~f~~~~-~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEV-CTRAFARQE-HLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTT-TCCBCSSHH-HHHHHHHHHSCCC
T ss_pred             CCeECCC-CCcccCCHH-HHHHHHHHhcCCC
Confidence            3689999 999997655 5999999998864

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.07  E-value=0.00021  Score=40.91  Aligned_cols=29  Identities=7%  Similarity=0.079  Sum_probs=24.6

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.. |++.|.... .|..|+++|++++
T Consensus         2 k~~~C~~-C~~~f~~~~-~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDY-CGRSFSDPT-SKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTT-TCCEESCHH-HHHHHHHTTCCCC
T ss_pred             cCccCCC-CCcccCCHH-HHHHHHHHhccCC
Confidence            5789999 999996655 5999999999864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.06  E-value=0.0003  Score=42.75  Aligned_cols=31  Identities=10%  Similarity=-0.031  Sum_probs=26.0

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++
T Consensus         6 ~~k~~~C~~-C~k~f~~~~-~l~~H~~~H~~~k   36 (36)
T 2elv_A            6 SGLLYDCHI-CERKFKNEL-DRDRHMLVHGDKW   36 (36)
T ss_dssp             CCCCEECSS-SCCEESSHH-HHHHHHTTTSTTC
T ss_pred             CCCCeECCC-CCCccCCHH-HHHHHHHHhcCCC
Confidence            356899999 999997665 5999999999874

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.04  E-value=0.00013  Score=44.97  Aligned_cols=32  Identities=6%  Similarity=-0.050  Sum_probs=27.7

Q ss_pred             cCccccC--ccCCccccCCchhHHHHhhhcCCCcee
Q 043134           64 LNLIDCF--KSTDSSQDSLENNDIHRQGNETEPRVF   97 (279)
Q Consensus        64 ~nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeKPf   97 (279)
                      .++|.|.  . |++.|.... .|..|+++|++++||
T Consensus         4 ~k~~~C~~~~-C~k~f~~~~-~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            4 DKPFLCTAPG-CGQRFTNED-HLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CCCEECCCTT-TCCEESSHH-HHHHHHHHHHTTTTT
T ss_pred             CcceECCCCC-CCcccCCHH-HHHHHHHHhCCCCCC
Confidence            4679999  8 999997665 599999999999887

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.04  E-value=0.00028  Score=42.69  Aligned_cols=31  Identities=10%  Similarity=-0.192  Sum_probs=26.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++
T Consensus         6 ~~~~~~C~~-C~k~f~~~~-~l~~H~~~H~~ek   36 (36)
T 2elr_A            6 SGKTHLCDM-CGKKFKSKG-TLKSHKLLHTADG   36 (36)
T ss_dssp             CCSSCBCTT-TCCBCSSHH-HHHHHHHHHSSCC
T ss_pred             CCCCeecCc-CCCCcCchH-HHHHHHHHhcCCC
Confidence            356899999 999997665 5999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.03  E-value=0.00028  Score=41.39  Aligned_cols=29  Identities=7%  Similarity=0.025  Sum_probs=24.3

Q ss_pred             CccccC--ccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.  . ||+.|.... .|..|+++|++++
T Consensus         1 kp~~C~~~~-C~k~f~~~~-~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSY-CGKRFTRSD-ELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTT-CCCBCSSHH-HHHHHHTTTSCCC
T ss_pred             CCcCCcCCC-CCcccCCHh-HHHHHHHHhcCCC
Confidence            368898  8 999997665 5999999999874

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=97.02  E-value=7.1e-05  Score=52.78  Aligned_cols=40  Identities=20%  Similarity=0.470  Sum_probs=35.6

Q ss_pred             hhcCCCceeecCC--CCcccCCCccccccccccCCCchhhhh
Q 043134           89 GNETEPRVFSCNY--CQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        89 r~HtgeKPfsC~~--CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..+...++|.|..  |++.|.....|..|+++|+++++|...
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   51 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCS   51 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCC
Confidence            3466789999998  999999999999999999999998763

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.00  E-value=0.00042  Score=39.89  Aligned_cols=29  Identities=10%  Similarity=-0.019  Sum_probs=24.2

Q ss_pred             CccccCccCCccccCCchhHHHH-hhhcCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHR-QGNETEPR   95 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~H-qr~HtgeK   95 (279)
                      ++|.|.. |++.|.... .|..| +++|++++
T Consensus         1 k~~~C~~-C~k~f~~~~-~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGL-CNRAFTRRD-LLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTT-TCCBCSSSH-HHHHHHTTTSCCCC
T ss_pred             CCcCCcc-cCcccCChH-HHHHHHHHHccCCC
Confidence            3689999 999997766 59999 79998874

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.00  E-value=0.00063  Score=49.33  Aligned_cols=41  Identities=7%  Similarity=0.064  Sum_probs=32.3

Q ss_pred             CCCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCc
Q 043134           61 KPELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQR  104 (279)
Q Consensus        61 ~~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgK  104 (279)
                      ..+.++|.|.+ |++.|.... .|..|+++|++++ ..|..|..
T Consensus         8 ~~~ekpy~C~~-CgK~F~~~s-~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            8 LREAGILPCGL-CGKVFTDAN-RLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             CCCCCCCCCTT-TCCCCSCHH-HHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCccCcCCCC-CCCccCCHH-HHHhhhhhhCCCc-cccccccC
Confidence            45678999999 999996655 5999999999974 45555554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.99  E-value=0.00026  Score=42.83  Aligned_cols=31  Identities=10%  Similarity=-0.034  Sum_probs=26.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++
T Consensus         6 ~~k~~~C~~-C~k~f~~~~-~l~~H~~~H~~~k   36 (36)
T 2elt_A            6 SGKPYKCPQ-CSYASAIKA-NLNVHLRKHTGEK   36 (36)
T ss_dssp             CCCSEECSS-SSCEESSHH-HHHHHHHHHTCCC
T ss_pred             CCCCCCCCC-CCcccCCHH-HHHHHHHHccCCC
Confidence            356899999 999997665 5999999999874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.95  E-value=0.00034  Score=42.48  Aligned_cols=31  Identities=6%  Similarity=-0.046  Sum_probs=26.0

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++
T Consensus         6 ~~k~~~C~~-C~k~f~~~~-~l~~H~~~H~~~k   36 (36)
T 2els_A            6 SGKIFTCEY-CNKVFKFKH-SLQAHLRIHTNEK   36 (36)
T ss_dssp             CCCCEECTT-TCCEESSHH-HHHHHHHHHCCCC
T ss_pred             CCCCEECCC-CCceeCCHH-HHHHHHHHhCCCC
Confidence            356899999 999997655 5999999999874

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.01  E-value=0.00012  Score=42.13  Aligned_cols=29  Identities=10%  Similarity=0.107  Sum_probs=24.4

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.. |++.|.... .|..|+++|++++
T Consensus         1 k~~~C~~-C~k~f~~~~-~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVM-CGKAFTQAS-SLIAHVRQHTGEK   29 (29)
Confidence            3689999 999997766 4999999998864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.94  E-value=0.00034  Score=42.48  Aligned_cols=31  Identities=10%  Similarity=0.056  Sum_probs=26.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ..++|.|.. |++.|.... .|..|+++|++++
T Consensus         6 ~~k~~~C~~-C~k~f~~~~-~l~~H~~~H~~~k   36 (36)
T 2elq_A            6 SGKPFKCSL-CEYATRSKS-NLKAHMNRHSTEK   36 (36)
T ss_dssp             CCCSEECSS-SSCEESCHH-HHHHHHHHSSTTC
T ss_pred             CCCCccCCC-CCchhCCHH-HHHHHHHHhccCC
Confidence            457899999 999997665 5999999999874

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=95.94  E-value=0.00015  Score=41.77  Aligned_cols=29  Identities=7%  Similarity=-0.033  Sum_probs=24.6

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.. |++.|.... .|..|+++|++++
T Consensus         2 k~~~C~~-C~k~f~~~~-~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIH-CQRQFADPG-ALQRHVRIHTGEK   30 (30)
Confidence            5789999 999997766 4999999998764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=96.88  E-value=0.00042  Score=39.02  Aligned_cols=27  Identities=11%  Similarity=-0.026  Sum_probs=21.7

Q ss_pred             ccccCccCCccccCCchhHHHHhhhcCCC
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      +|.|.. |++.|.... .|..|+++|+++
T Consensus         1 ~~~C~~-C~k~f~~~~-~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGL-CERSFVEKS-ALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSS-SCCBCSSHH-HHHHHGGGTCC-
T ss_pred             CccCCC-CCCcCCCHH-HHHHHHHHcCCC
Confidence            478999 999997665 599999999864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.88  E-value=0.00022  Score=40.62  Aligned_cols=29  Identities=7%  Similarity=0.044  Sum_probs=24.2

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.. |++.|.... .|..|+++|++++
T Consensus         1 ~~~~C~~-C~k~f~~~~-~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRE-CGKQFTTSG-NLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTT-TSCEESCHH-HHHHHHHHHHTCC
T ss_pred             CCccCCC-CCCccCChh-HHHHHHHHhcCCC
Confidence            3688999 999996655 5999999998874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.88  E-value=0.00038  Score=42.53  Aligned_cols=31  Identities=6%  Similarity=-0.143  Sum_probs=26.1

Q ss_pred             CcCccccCccCCccccCC-chhHHHHhhhcCCCc
Q 043134           63 ELNLIDCFKSTDSSQDSL-ENNDIHRQGNETEPR   95 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~-ss~L~~Hqr~HtgeK   95 (279)
                      ..++|.|.. |++.|... . .|..|+++|++++
T Consensus         6 ~~k~~~C~~-C~k~f~~~~~-~L~~H~~~H~~~k   37 (37)
T 2elp_A            6 SGRAMKCPY-CDFYFMKNGS-DLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCCEECSS-SSCEECSSCH-HHHHHHHHHHTCC
T ss_pred             CCCCeECCC-CChhhccCHH-HHHHHHHhcCCCC
Confidence            356899999 99999776 5 5999999998864

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.86  E-value=0.00011  Score=51.23  Aligned_cols=36  Identities=22%  Similarity=0.436  Sum_probs=32.1

Q ss_pred             cCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           91 ETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        91 HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      ..+++||.|.+|++.|. ...|..|+++ ++++||...
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~   40 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACP   40 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECT
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCC
Confidence            46789999999999999 9999999999 889888754

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=96.82  E-value=0.00032  Score=45.00  Aligned_cols=32  Identities=13%  Similarity=0.101  Sum_probs=25.2

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCCceeecCCC
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYC  102 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~C  102 (279)
                      ...++|.|.+ ||++|.... .|..|+       ||.|...
T Consensus         4 ~gekp~~C~~-CgK~F~~~s-~L~~H~-------py~C~~r   35 (36)
T 1fv5_A            4 LKPARFMCLP-CGIAFSSPS-TLEAHQ-------AYYCSHR   35 (36)
T ss_dssp             SSCCCCEETT-TTEECSCHH-HHHHHH-------HHTSTTC
T ss_pred             CCccCeECCC-CCCccCCHh-HccCcC-------CeECcCC
Confidence            3467999999 999996655 589987       7888653

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.74  E-value=0.00051  Score=39.07  Aligned_cols=27  Identities=7%  Similarity=-0.109  Sum_probs=22.7

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETE   93 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~Htg   93 (279)
                      ++|.|.. |++.|.... .|..|+++|++
T Consensus         2 k~~~C~~-C~k~f~~~~-~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSV-CGKRFSLKH-QMETHYRVHTG   28 (28)
T ss_dssp             CSEECSS-SCCEESCHH-HHHHHHTTSCC
T ss_pred             cCccCCC-CCcccCCHH-HHHHHHHhcCC
Confidence            5799999 999997655 59999999874

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=96.66  E-value=0.00099  Score=40.47  Aligned_cols=30  Identities=10%  Similarity=0.070  Sum_probs=25.1

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ..++|.|.. |++.|.... .|..|+++|+++
T Consensus         8 ~~k~~~C~~-C~k~f~~~~-~l~~H~~~H~~~   37 (37)
T 1p7a_A            8 GIKPFQCPD-CDRSFSRSD-HLALHRKRHMLV   37 (37)
T ss_dssp             CSSSBCCTT-TCCCBSSHH-HHHHHHGGGTCC
T ss_pred             CCCCccCCC-CCcccCcHH-HHHHHHHHhccC
Confidence            457899999 999997665 599999999874

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.60  E-value=0.00093  Score=43.10  Aligned_cols=31  Identities=16%  Similarity=-0.027  Sum_probs=25.8

Q ss_pred             CCcCccccC--ccCCccccCCchhHHHHhhhcCCC
Q 043134           62 PELNLIDCF--KSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        62 ~e~nlf~C~--e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ...++|.|.  . |++.|.... .|..|+++|+++
T Consensus         5 ~gekp~~C~~~~-C~k~F~~~~-~L~~H~r~Htg~   37 (38)
T 2eln_A            5 SSGILLKCPTDG-CDYSTPDKY-KLQAHLKVHTAL   37 (38)
T ss_dssp             SCCCCEECSSSS-CCCEESCHH-HHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCC-CCCccCCHH-HHHHHHHhcCCC
Confidence            345789997  6 999997665 599999999986

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.59  E-value=7.6e-05  Score=54.66  Aligned_cols=44  Identities=18%  Similarity=0.182  Sum_probs=39.2

Q ss_pred             HHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhhc
Q 043134           84 DIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRG  129 (279)
Q Consensus        84 L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr~  129 (279)
                      |..|+++|.+++|+.|.+|++.|. ...|..|+ .|.+++|+....
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~   48 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGN   48 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSS
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEccc
Confidence            778999999999999999999995 88899999 899999887653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.56  E-value=0.00074  Score=38.22  Aligned_cols=26  Identities=4%  Similarity=0.034  Sum_probs=22.0

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNET   92 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~Ht   92 (279)
                      ++|.|.. ||+.|.... .|..|+++|+
T Consensus         2 k~~~C~~-C~k~f~~~~-~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSL-CPQRSRDFS-AMTKHLRTHG   27 (27)
T ss_dssp             CCEECSS-SSCEESSHH-HHHHHHHHCC
T ss_pred             cCccCCC-cChhhCCHH-HHHHHHHHcc
Confidence            5799999 999997665 5999999885

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=96.46  E-value=0.00077  Score=41.49  Aligned_cols=31  Identities=10%  Similarity=-0.068  Sum_probs=25.6

Q ss_pred             CcCccccC--ccCCccccCCchhHHHHhhhcCCCc
Q 043134           63 ELNLIDCF--KSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        63 e~nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ..++|.|.  . |++.|.... .|..|+++|++++
T Consensus         5 ~~k~~~C~~~~-C~k~f~~~~-~L~~H~~~H~~ek   37 (37)
T 1va1_A            5 KKKQHICHIQG-CGKVYGKTS-HLRAHLRWHTGER   37 (37)
T ss_dssp             SCCCEECCSTT-CCCEESCHH-HHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCC-CCCccCCHH-HHHHHHHhcCCCC
Confidence            34689998  8 999996655 5999999999874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.44  E-value=0.00078  Score=38.42  Aligned_cols=26  Identities=12%  Similarity=0.027  Sum_probs=21.8

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNET   92 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~Ht   92 (279)
                      ++|.|.. ||+.|.... .|..|+++|+
T Consensus         2 k~~~C~~-C~k~f~~~~-~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPL-CRAGCPSLA-SMQAHMRGHS   27 (27)
T ss_dssp             CTEEETT-TTEEESCHH-HHHHHHTTCC
T ss_pred             cCcCCCC-CCcccCCHH-HHHHHHHhcC
Confidence            5799999 999996655 5999998875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.28  E-value=0.00067  Score=38.06  Aligned_cols=26  Identities=4%  Similarity=-0.075  Sum_probs=21.4

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNET   92 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~Ht   92 (279)
                      ++|.|.. ||+.|.... .|..|+++|+
T Consensus         1 kp~~C~~-C~k~f~~~~-~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCER-CGKRFVQSS-QLANHIRHHD   26 (26)
Confidence            3689999 999997766 4999988874

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.26  E-value=0.0014  Score=40.31  Aligned_cols=30  Identities=10%  Similarity=-0.042  Sum_probs=25.0

Q ss_pred             CcCccccCccCCccccCCchhHHHH-hhhcCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHR-QGNETEP   94 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~H-qr~Htge   94 (279)
                      ..++|.|.. |++.|.... .|..| +++|+++
T Consensus         6 ~~k~~~C~~-C~k~f~~~~-~L~~H~~~~H~~~   36 (37)
T 2elm_A            6 SGHLYYCSQ-CHYSSITKN-CLKRHVIQKHSNI   36 (37)
T ss_dssp             SSCEEECSS-SSCEEECHH-HHHHHHHHHTCCC
T ss_pred             CCcCeECCC-CCcccCCHH-HHHHHHHHHccCc
Confidence            357899999 999997665 59999 8999875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=96.25  E-value=0.0015  Score=42.87  Aligned_cols=31  Identities=3%  Similarity=-0.162  Sum_probs=24.3

Q ss_pred             cCccccCccCCccccCCchhHHHHhh-hcCCCce
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQG-NETEPRV   96 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr-~HtgeKP   96 (279)
                      .++|.|.. |++.|.... .|..|++ +|+++..
T Consensus         5 ~kp~~C~~-C~k~F~~~~-~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            5 DKPYACDI-CGKRYKNRP-GLSYHYAHSHLAEEE   36 (48)
T ss_dssp             TSCEECTT-TCCEESSHH-HHHHHHHHSSCC---
T ss_pred             CcCEECCC-cCcccCCHH-HHHHHhhhhcCCCCC
Confidence            46899999 999997665 5999999 9998754

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.18  E-value=0.0022  Score=41.79  Aligned_cols=30  Identities=13%  Similarity=0.089  Sum_probs=25.5

Q ss_pred             cCccccC--ccCCccccCCchhHHHHhhhcCCCc
Q 043134           64 LNLIDCF--KSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        64 ~nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      .++|.|.  . |++.|.... .|..|+++|++++
T Consensus        16 ~k~~~C~~~~-C~k~F~~~~-~L~~H~~~H~~ek   47 (47)
T 1ncs_A           16 DKTFECLFPG-CTKTFKRRY-NIRSHIQTHLEDR   47 (47)
T ss_dssp             TTEEECCCTT-CCCEECSSS-SHHHHHHHHTTTC
T ss_pred             CCCeECCCCC-CCCccCCHH-HHHHHHHHccCCC
Confidence            4689995  8 999997776 4999999999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.07  E-value=0.0018  Score=36.62  Aligned_cols=26  Identities=12%  Similarity=0.069  Sum_probs=21.9

Q ss_pred             ccccC--ccCCccccCCchhHHHHhhhcCC
Q 043134           66 LIDCF--KSTDSSQDSLENNDIHRQGNETE   93 (279)
Q Consensus        66 lf~C~--e~CGksFss~ss~L~~Hqr~Htg   93 (279)
                      +|.|.  . |++.|.... .|..|+++|++
T Consensus         2 ~~~C~~~~-C~k~f~~~~-~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFEN-CGRSFNDRR-KLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTT-TCEEESSHH-HHHHHHGGGTC
T ss_pred             CCCCcCCc-CcCccCCHH-HHHHHHHHhCC
Confidence            68899  9 999997665 59999999874

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.73  E-value=0.0015  Score=53.50  Aligned_cols=40  Identities=23%  Similarity=0.329  Sum_probs=32.2

Q ss_pred             hhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhhcCC
Q 043134           88 QGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQR  131 (279)
Q Consensus        88 qr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr~~~  131 (279)
                      ...|+|+++|.|..|+|.|.+...|..|++.    |.|+||-+.
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rs----K~HKrrvk~   81 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRS----KDHKKRLKQ   81 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTC----HHHHHHHHH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhh----hhhhHHHHH
Confidence            3458999999999999999999999999875    445555443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=92.32  E-value=0.026  Score=40.25  Aligned_cols=45  Identities=20%  Similarity=0.201  Sum_probs=37.6

Q ss_pred             CCccccCCchhHHHHh-hhcCCCc------eeecC--CCCcccCCCccccccccc
Q 043134           73 TDSSQDSLENNDIHRQ-GNETEPR------VFSCN--YCQRKFYSSQALGGHQNA  118 (279)
Q Consensus        73 CGksFss~ss~L~~Hq-r~HtgeK------PfsC~--~CgKsFssssaL~~Hqr~  118 (279)
                      |++.|.+.. .|..|. +.|.+.+      +|.|.  .|++.+.....|..|+++
T Consensus         9 C~~~f~~~~-~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLF-DLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHH-HHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHH-HHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            999997765 589897 5788765      89997  999999888889888875

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=88.96  E-value=0.41  Score=36.07  Aligned_cols=61  Identities=13%  Similarity=0.284  Sum_probs=43.8

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhhhh
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR  128 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr  128 (279)
                      .=.|.|.. ||..+...  .+..|...-.+-..|.|-.|++.|.. ..+..|...-+.+.-|...
T Consensus         8 MV~F~C~~-Cgd~lKK~--kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~HtsCISEaeKY~g~   68 (79)
T 1wjv_A            8 MVFFTCNA-CGESVKKI--QVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVKCISEGQKYGGK   68 (79)
T ss_dssp             CCEEEESS-SCCEEETT--HHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCCCCSCTTSSCCC
T ss_pred             eeEEEcCC-CCCeeecc--cchhHHhhCCCCCcEEecccCCeeCC-CCEeCEeeeCChhheeeec
Confidence            34689999 99998433  48889766666678999999999985 5577776554444444433

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=83.54  E-value=0.44  Score=39.33  Aligned_cols=58  Identities=14%  Similarity=0.156  Sum_probs=42.4

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCccccccccccCCCchhh
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA  126 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~  126 (279)
                      .++.|.. |+..+...  .+..|....-..+...|.+|+..|. ...|..|+.+++|+.++.
T Consensus       109 ~~v~C~~-C~~~~~r~--~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~~  166 (170)
T 3hcs_A          109 ALMDCPQ-CQRPFQKF--HINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALEHH  166 (170)
T ss_dssp             SEEECTT-TCCEEEGG--GHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC-----
T ss_pred             eeeECCC-CChHHHHH--HHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhhhh
Confidence            4567888 99988433  4888887777888999999999885 466889999999887765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	279
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	5e-13

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 59.7 bits (145), Expect = 5e-13
 Identities = 17/35 (48%), Positives = 27/35 (77%)

Query: 93  EPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAK 127
            PR ++C++C+R+F S+QALGGH N H+R+R   +
Sbjct: 2   PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	279
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.38
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.09
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.99
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.85
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.85
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.74
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.69
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.68
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.67
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.65
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.59
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.55
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.54
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.39
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.28
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.27
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.24
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.15
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.12
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.09
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.02
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.99
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.98
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.96
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.94
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	97.9
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.9
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.9
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.88
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.8
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.6
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.52
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.47
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.38
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.36
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	97.33
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.28
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	96.98
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.97
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	96.94
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.92
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.69
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.69
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.28
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.22
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.04
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.03
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.97
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.94
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	95.71
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.6
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.49
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	95.47
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.42
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.31
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.16
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.43
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.22
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	94.18
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.46
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	93.03
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.75
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	92.25
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	91.06
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	90.99
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.47
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	88.67
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	88.38
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	87.81
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	85.52
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	85.1
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	84.07
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	83.8
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	83.76
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	83.73
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	82.57

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2.8e-14  Score=98.42  Aligned_cols=52  Identities=23%  Similarity=0.402  Sum_probs=48.9

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCceeecCCCCcccCCCcccccccccc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~H  119 (279)
                      ++|.| + ||+.|.... .|..|+++|++++||.|.+|++.|.....|..|+++|
T Consensus         2 K~y~C-~-Cgk~F~~~~-~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPC-Q-CGKSFTHKS-QRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEEC-T-TSCEESSHH-HHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCC-C-CCCeECCHH-HhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            68999 9 999997665 5999999999999999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=3.5e-12  Score=82.79  Aligned_cols=37  Identities=27%  Similarity=0.565  Sum_probs=35.7

Q ss_pred             HHhhhcCCCceeecCCCCcccCCCccccccccccCCC
Q 043134           86 HRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        86 ~Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      +|+++|+++|||.|++|+|.|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5889999999999999999999999999999999997

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=2.3e-11  Score=76.74  Aligned_cols=33  Identities=27%  Similarity=0.482  Sum_probs=31.9

Q ss_pred             hcCCCceeecCCCCcccCCCccccccccccCCC
Q 043134           90 NETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        90 ~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      +|+++|||+|.+|+|.|.+.+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            599999999999999999999999999999987

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=1.4e-10  Score=74.29  Aligned_cols=35  Identities=20%  Similarity=0.408  Sum_probs=32.7

Q ss_pred             hhcCCCceeecCCCCcccCCCccccccccccCCCc
Q 043134           89 GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      |+|+|+|||+|.+|++.|.....|..|+++|.++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            58999999999999999999999999999998763

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=1.4e-10  Score=74.71  Aligned_cols=35  Identities=29%  Similarity=0.468  Sum_probs=32.9

Q ss_pred             HhhhcCCCceeecCCCCcccCCCccccccccccCC
Q 043134           87 RQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKR  121 (279)
Q Consensus        87 Hqr~HtgeKPfsC~~CgKsFssssaL~~Hqr~Htg  121 (279)
                      |.|+|++||||+|.+|++.|.+.+.|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67899999999999999999999999999999963

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.74  E-value=6.6e-10  Score=70.73  Aligned_cols=33  Identities=21%  Similarity=0.431  Sum_probs=31.0

Q ss_pred             cCCCceeecCCCCcccCCCccccccccccCCCc
Q 043134           91 ETEPRVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        91 HtgeKPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      |+|+|||+|.+|+|.|.+...|..|+++|+.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            799999999999999999999999999998753

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.69  E-value=8.5e-10  Score=67.39  Aligned_cols=29  Identities=34%  Similarity=0.722  Sum_probs=25.2

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCc
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      |||.|++|+|.|.+...|..|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68888888888888888888888888886

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.68  E-value=9.8e-10  Score=74.24  Aligned_cols=39  Identities=21%  Similarity=0.445  Sum_probs=35.7

Q ss_pred             HHHHhhhcCCCceeecCC--CCcccCCCccccccccccCCCc
Q 043134           84 DIHRQGNETEPRVFSCNY--CQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        84 L~~Hqr~HtgeKPfsC~~--CgKsFssssaL~~Hqr~HtgER  123 (279)
                      +.+|+ .|++++||.|.+  |++.|.....|..|+++|+|||
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            56666 499999999987  9999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=1e-09  Score=71.38  Aligned_cols=34  Identities=12%  Similarity=0.074  Sum_probs=18.6

Q ss_pred             CccccCccCCccccCCchhHHHHhh-hcCCCceeecC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQG-NETEPRVFSCN  100 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr-~HtgeKPfsC~  100 (279)
                      ++|.|.+ ||+.|.... .|..|++ +|+++|||+|+
T Consensus         4 Kpy~C~~-Cgk~F~~~~-~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQS-CGKGFSRPD-HLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSS-SCCEESSHH-HHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCC-CCCCcCChH-HhhccCcCccCCCcCcCCc
Confidence            4556666 666664433 3555543 56666666654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=1.5e-09  Score=66.33  Aligned_cols=29  Identities=28%  Similarity=0.725  Sum_probs=23.5

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCc
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      |||.|.+|+|.|.+.+.|..|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57888888888888888888888888875

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=2.3e-09  Score=68.48  Aligned_cols=33  Identities=18%  Similarity=0.435  Sum_probs=29.5

Q ss_pred             hhcCCCceeecCCCCcccCCCcccccccc-ccCC
Q 043134           89 GNETEPRVFSCNYCQRKFYSSQALGGHQN-AHKR  121 (279)
Q Consensus        89 r~HtgeKPfsC~~CgKsFssssaL~~Hqr-~Htg  121 (279)
                      |+|+|||||+|.+|++.|.+...|..|++ .|+.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            57999999999999999999999999974 5654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.55  E-value=2e-09  Score=65.19  Aligned_cols=28  Identities=32%  Similarity=0.644  Sum_probs=24.8

Q ss_pred             CceeecCCCCcccCCCccccccccccCC
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHKR  121 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~Htg  121 (279)
                      ||||+|.+|+|.|.++..|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6889999999999999999999998876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.2e-08  Score=66.23  Aligned_cols=35  Identities=26%  Similarity=0.512  Sum_probs=32.3

Q ss_pred             CCceeecCCCCcccCCCcccccccc-ccCCCchhhh
Q 043134           93 EPRVFSCNYCQRKFYSSQALGGHQN-AHKRERTLAK  127 (279)
Q Consensus        93 geKPfsC~~CgKsFssssaL~~Hqr-~HtgERpy~k  127 (279)
                      .+|||+|.+|+|.|.....|..|++ +|++||||..
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            5799999999999999999999975 8999999974

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.39  E-value=7.8e-09  Score=61.50  Aligned_cols=26  Identities=27%  Similarity=0.588  Sum_probs=19.4

Q ss_pred             ceeecCCCCcccCCCccccccccccC
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~Ht  120 (279)
                      |||+|++|||.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57777777777777777777777764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=4.4e-08  Score=60.47  Aligned_cols=29  Identities=38%  Similarity=0.850  Sum_probs=24.7

Q ss_pred             ceeecC--CCCcccCCCccccccccccCCCc
Q 043134           95 RVFSCN--YCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        95 KPfsC~--~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      |||.|+  .|+|.|.....|..|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            688886  49999999999999999998886

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=3.7e-08  Score=60.43  Aligned_cols=28  Identities=21%  Similarity=0.624  Sum_probs=26.3

Q ss_pred             ceeecCC--CCcccCCCccccccccccCCC
Q 043134           95 RVFSCNY--CQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        95 KPfsC~~--CgKsFssssaL~~Hqr~HtgE  122 (279)
                      |||.|.+  |+|.|.+.+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899999  999999999999999999987

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.24  E-value=3.3e-08  Score=60.61  Aligned_cols=28  Identities=25%  Similarity=0.660  Sum_probs=25.8

Q ss_pred             ceeecCC--CCcccCCCccccccccccCCC
Q 043134           95 RVFSCNY--CQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        95 KPfsC~~--CgKsFssssaL~~Hqr~HtgE  122 (279)
                      |||.|.+  |+|.|.....|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899988  999999999999999999987

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=4.4e-07  Score=55.03  Aligned_cols=29  Identities=3%  Similarity=-0.005  Sum_probs=25.7

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.+ ||++|..++ .|..|+++|+++|
T Consensus         1 Kpy~C~~-C~k~F~~~s-~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPE-CPKRFMRSD-HLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTT-TTCCCSCSH-HHHHHHHGGGCCC
T ss_pred             CCEECCc-CCCeecchH-HhhhhcCccCCcC
Confidence            4799999 999997666 5999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=9.5e-08  Score=64.83  Aligned_cols=35  Identities=17%  Similarity=0.361  Sum_probs=32.3

Q ss_pred             CceeecCCCCcccCCCccccccccccCCCchhhhhc
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRG  129 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr~  129 (279)
                      ||||.| .||+.|.....|..|+++|++++||....
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~   35 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGV   35 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCC
Confidence            689999 59999999999999999999999998663

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.09  E-value=5.4e-07  Score=54.58  Aligned_cols=29  Identities=10%  Similarity=0.025  Sum_probs=25.5

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.. ||+.|...+ .|.+|+++|||||
T Consensus         1 kp~~C~~-C~k~F~~~~-~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEV-CTRAFARQE-HLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTT-TCCCBSCHH-HHHHHHHTTTSSC
T ss_pred             CcCCCCC-CCCCCCCch-HcccccCcccCCC
Confidence            4799999 999996655 6999999999986

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.02  E-value=2.9e-07  Score=58.72  Aligned_cols=32  Identities=53%  Similarity=1.178  Sum_probs=28.4

Q ss_pred             CceeecCCCCcccCCCccccccccccCCCchh
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHKRERTL  125 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~HtgERpy  125 (279)
                      .+.|.|.+|+|.|.+.++|++||++|..+|.-
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~~   34 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRAR   34 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHHH
Confidence            35799999999999999999999999877653

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.99  E-value=5.9e-07  Score=55.66  Aligned_cols=29  Identities=28%  Similarity=0.692  Sum_probs=26.5

Q ss_pred             CceeecCC--CCcccCCCccccccccccCCC
Q 043134           94 PRVFSCNY--CQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        94 eKPfsC~~--CgKsFssssaL~~Hqr~HtgE  122 (279)
                      ||||.|.+  |+|.|.....|..|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999998  999999999999999999753

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=5.8e-07  Score=57.05  Aligned_cols=28  Identities=11%  Similarity=0.194  Sum_probs=20.3

Q ss_pred             CCccccCCchhHHHHhhhcCCCceeecCC
Q 043134           73 TDSSQDSLENNDIHRQGNETEPRVFSCNY  101 (279)
Q Consensus        73 CGksFss~ss~L~~Hqr~HtgeKPfsC~~  101 (279)
                      ||+.|.... .|.+|+++|+++|||+|++
T Consensus         9 C~k~F~~~~-~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           9 CGKSFNFKK-HLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             TCCEESSHH-HHHHHHHHHHTSCCCSCCS
T ss_pred             CCCeeCChh-HhccccCeeCCCCCEeCCC
Confidence            777775554 4777888888888887763

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=2.4e-07  Score=58.93  Aligned_cols=31  Identities=29%  Similarity=0.512  Sum_probs=29.1

Q ss_pred             eecCC--CCcccCCCccccccccccCCCchhhh
Q 043134           97 FSCNY--CQRKFYSSQALGGHQNAHKRERTLAK  127 (279)
Q Consensus        97 fsC~~--CgKsFssssaL~~Hqr~HtgERpy~k  127 (279)
                      |.|.+  |+|.|.....|..|+++|++||||+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            78987  99999999999999999999999974

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.94  E-value=3.1e-07  Score=55.76  Aligned_cols=27  Identities=33%  Similarity=0.687  Sum_probs=24.9

Q ss_pred             ceeecCC--CCcccCCCccccccccccCC
Q 043134           95 RVFSCNY--CQRKFYSSQALGGHQNAHKR  121 (279)
Q Consensus        95 KPfsC~~--CgKsFssssaL~~Hqr~Htg  121 (279)
                      |||.|++  |+|.|.+...|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899988  99999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=2.2e-06  Score=54.73  Aligned_cols=31  Identities=13%  Similarity=0.051  Sum_probs=26.9

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCCC
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ...++|.|.+ |||+|...+ .|..|+++|+||
T Consensus         8 t~ekpy~C~~-CgK~F~~~s-~L~~H~r~HtGE   38 (38)
T d2cota2           8 RERRRYKCDE-CGKSFSHSS-DLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCSSBCSS-SCCBCSCHH-HHHHHHTTTCCS
T ss_pred             CCCCCEecCC-CCceeeCHH-HHHHhCccCCCC
Confidence            4568999999 999996665 599999999996

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=8.4e-07  Score=53.38  Aligned_cols=26  Identities=35%  Similarity=0.747  Sum_probs=24.1

Q ss_pred             ceeecCC--CCcccCCCccccccccccC
Q 043134           95 RVFSCNY--CQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        95 KPfsC~~--CgKsFssssaL~~Hqr~Ht  120 (279)
                      |||.|++  |+|.|.+...|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899998  9999999999999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=1.8e-06  Score=53.77  Aligned_cols=30  Identities=10%  Similarity=0.035  Sum_probs=26.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ..+||.|.+ ||++|.... .|..|+++|+||
T Consensus         4 gekpy~C~~-Cgk~F~~~~-~L~~H~r~HtgE   33 (33)
T d1x6ea1           4 GEKPYGCVE-CGKAFSRSS-ILVQHQRVHTGE   33 (33)
T ss_dssp             TCCCEECSS-SCCEESSHH-HHHHHHHGGGCS
T ss_pred             CCCCeeCCC-CCCEeCchH-HhHhhccccCCC
Confidence            468999999 999997665 599999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1e-06  Score=52.16  Aligned_cols=26  Identities=15%  Similarity=0.170  Sum_probs=22.6

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNET   92 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~Ht   92 (279)
                      +||+|.+ |||.|...+ .|..|+++||
T Consensus         1 KPy~C~e-CgK~F~~~s-~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLE-CGKAFSQNS-GLINHQRIHT   26 (26)
T ss_dssp             CCEECSS-SCCEESSHH-HHHHHHHHHH
T ss_pred             CCccCCC-CcCeeccCc-ccccCccCCC
Confidence            5899999 999996665 5999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.80  E-value=1.8e-06  Score=51.85  Aligned_cols=28  Identities=7%  Similarity=-0.032  Sum_probs=24.3

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcCC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNETE   93 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~Htg   93 (279)
                      ++||.|.+ |++.|..+. .|..|+++|||
T Consensus         1 EKPy~C~~-C~k~F~~~~-~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRI-CMRNFSRSD-HLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTT-TCCEESCHH-HHHHHHHHHHC
T ss_pred             CcCccCCC-CcCEecccc-cccccCCCccC
Confidence            36899999 999996655 59999999986

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.60  E-value=3.9e-06  Score=49.66  Aligned_cols=27  Identities=33%  Similarity=0.657  Sum_probs=23.9

Q ss_pred             CceeecCCCCcccCCCccccccccccC
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~Ht  120 (279)
                      ||||.|+.||+.|..+....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999988884

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.52  E-value=5.7e-06  Score=47.63  Aligned_cols=26  Identities=23%  Similarity=0.489  Sum_probs=21.6

Q ss_pred             eeecCCCCcccCCCccccccccccCC
Q 043134           96 VFSCNYCQRKFYSSQALGGHQNAHKR  121 (279)
Q Consensus        96 PfsC~~CgKsFssssaL~~Hqr~Htg  121 (279)
                      |++|+.|+|.|+....|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56788888888888888888888875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=2.3e-05  Score=47.90  Aligned_cols=29  Identities=7%  Similarity=0.025  Sum_probs=24.4

Q ss_pred             CccccC--ccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ++|.|.  . ||+.|...+ .|..|+++|+|+|
T Consensus         1 kpf~C~~~~-C~k~F~~~~-~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSY-CGKRFTRSD-ELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTT-CCCBCSSHH-HHHHHHTTTSCCC
T ss_pred             CcCCCcCCC-CCcCcCChh-HhhhhcCcccccC
Confidence            478895  7 999996665 5999999999986

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=1.2e-05  Score=47.04  Aligned_cols=26  Identities=35%  Similarity=0.574  Sum_probs=18.0

Q ss_pred             eecCCCCcccCCCccccccccccCCC
Q 043134           97 FSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        97 fsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      +.|.+|||.|..++.|++|+-+|+||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            56777777777777777777777664

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=1.1e-05  Score=49.53  Aligned_cols=31  Identities=23%  Similarity=0.516  Sum_probs=23.9

Q ss_pred             ceeecCCCCcccCCCccccccccccCCCchh
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHKRERTL  125 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~HtgERpy  125 (279)
                      |...|..|||.|.....|.+|.-.|++||||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4467888888888777888887778888776

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.33  E-value=3.5e-05  Score=48.28  Aligned_cols=30  Identities=13%  Similarity=-0.033  Sum_probs=26.0

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ..+||.|.. |++.|..+. .|..|+++|+.+
T Consensus         4 GekPy~C~~-C~k~F~~~~-~L~~H~r~Ht~~   33 (35)
T d1srka_           4 GKRPFVCRI-CLSAFTTKA-NCARHLKVHTDT   33 (35)
T ss_dssp             CCSCEECSS-SCCEESSHH-HHHHHHGGGTSC
T ss_pred             CCccccCCC-CCCcccChH-HHHHHccccCCc
Confidence            468999999 999997666 599999999875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=4.7e-05  Score=47.82  Aligned_cols=31  Identities=10%  Similarity=-0.012  Sum_probs=26.3

Q ss_pred             CcCccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ..+||.|.+ ||++|.... .|..|+++|+++.
T Consensus         5 gekPy~C~~-C~k~F~~~~-~L~~H~r~H~~~~   35 (36)
T d1x6ha2           5 GEKPYACSH-CDKTFRQKQ-LLDMHFKRYHDPN   35 (36)
T ss_dssp             CCCCEECSS-SSCEESSHH-HHHHHHHHTTCSS
T ss_pred             CCCCEECCC-CCCCcCCHh-HHHHhCcccCCCC
Confidence            468999999 999997665 5999999998763

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.98  E-value=0.00017  Score=45.38  Aligned_cols=30  Identities=10%  Similarity=0.091  Sum_probs=25.5

Q ss_pred             CCcCccccCccCCccccCCchhHHHHhhhcCC
Q 043134           62 PELNLIDCFKSTDSSQDSLENNDIHRQGNETE   93 (279)
Q Consensus        62 ~e~nlf~C~e~CGksFss~ss~L~~Hqr~Htg   93 (279)
                      ..++||.|.+ |+++|..+. .|..|+++|..
T Consensus         7 TgeKPy~C~~-C~k~F~~~~-~L~~H~r~H~~   36 (37)
T d1p7aa_           7 TGIKPFQCPD-CDRSFSRSD-HLALHRKRHML   36 (37)
T ss_dssp             CCSSSBCCTT-TCCCBSSHH-HHHHHHGGGTC
T ss_pred             CCccCeEeCC-CCCEecCHH-HHHHHHhcCcC
Confidence            4568999999 999997665 59999999964

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.97  E-value=7.7e-05  Score=45.13  Aligned_cols=29  Identities=10%  Similarity=-0.083  Sum_probs=23.2

Q ss_pred             CccccC-ccCCccccCCchhHHHHhhhcCCC
Q 043134           65 NLIDCF-KSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        65 nlf~C~-e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ++|.|. ..||+.|.... .|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~-~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDF-NLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHH-HHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHH-HcCccccccCCC
Confidence            478884 23999996665 599999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.94  E-value=0.00016  Score=47.96  Aligned_cols=31  Identities=13%  Similarity=0.081  Sum_probs=26.4

Q ss_pred             CcCccccC--ccCCccccCCchhHHHHhhhcCCCc
Q 043134           63 ELNLIDCF--KSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        63 e~nlf~C~--e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      ..++|.|.  . |++.|....+ |..|+++|+|+|
T Consensus        15 gekpy~C~~~~-C~k~F~~~~~-L~~H~r~Htgek   47 (47)
T d1ncsa_          15 PDKTFECLFPG-CTKTFKRRYN-IRSHIQTHLEDR   47 (47)
T ss_dssp             TTTEEECCCTT-CCCEECSSSS-HHHHHHHHTTTC
T ss_pred             CCCCeECCcCC-CCccccCchH-HHhhcccccCCC
Confidence            45789994  6 9999977764 999999999986

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00016  Score=43.66  Aligned_cols=28  Identities=21%  Similarity=0.128  Sum_probs=22.8

Q ss_pred             CccccC--ccCCccccCCchhHHHHhhhcCCC
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ++|.|.  . ||+.|.... .|..|+++|+||
T Consensus         1 kp~~C~~~g-Cgk~F~~~~-~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEG-CRKSYSRLE-NLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTT-CCCCCSSHH-HHHHHHHHTTTC
T ss_pred             CCeeCCCCC-CCceECChh-HhhhhcCcCcCC
Confidence            367784  4 999996655 699999999986

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.69  E-value=0.00012  Score=41.66  Aligned_cols=24  Identities=42%  Similarity=0.911  Sum_probs=21.6

Q ss_pred             eecCCCCcccCCCccccccccccC
Q 043134           97 FSCNYCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        97 fsC~~CgKsFssssaL~~Hqr~Ht  120 (279)
                      |+|..|.++|...++|.+||++|+
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            689999999999999999999985

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.00012  Score=42.95  Aligned_cols=29  Identities=28%  Similarity=0.481  Sum_probs=24.0

Q ss_pred             CceeecCCCCcccCCCccccccccccCCC
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      ++||+|..|...-..++.|..|.|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57888888888888888888888888874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.00016  Score=43.33  Aligned_cols=29  Identities=21%  Similarity=0.508  Sum_probs=24.9

Q ss_pred             CceeecCCCCcccCCCccccccccccCCC
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      ||||+|..|...|.....+.-|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999888888888653

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.0012  Score=38.41  Aligned_cols=26  Identities=12%  Similarity=-0.084  Sum_probs=21.7

Q ss_pred             cccCccCCccccCCchhHHHHhhhcCCC
Q 043134           67 IDCFKSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        67 f~C~e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ..|.+ |||.|... +.|.+|+.+||+|
T Consensus         3 hvc~e-cgkaf~es-sklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAE-CGKAFVES-SKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTT-TCCEESSH-HHHHHHGGGTSCC
T ss_pred             chHHH-HhHHHHHH-HHHHHHhhcccCC
Confidence            35999 99999554 4699999999986

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.00038  Score=40.86  Aligned_cols=27  Identities=22%  Similarity=0.431  Sum_probs=20.1

Q ss_pred             eecCCCCcccCCCccccccccccCCCc
Q 043134           97 FSCNYCQRKFYSSQALGGHQNAHKRER  123 (279)
Q Consensus        97 fsC~~CgKsFssssaL~~Hqr~HtgER  123 (279)
                      |.|.+|+......+-|..|.|.|++||
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            667777777777777777777777764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.03  E-value=0.00061  Score=40.73  Aligned_cols=27  Identities=11%  Similarity=-0.005  Sum_probs=21.7

Q ss_pred             CccccC--ccCCccccCCchhHHHHhhhcCC
Q 043134           65 NLIDCF--KSTDSSQDSLENNDIHRQGNETE   93 (279)
Q Consensus        65 nlf~C~--e~CGksFss~ss~L~~Hqr~Htg   93 (279)
                      ++|.|.  . |++.|...+ .|..|+++|+|
T Consensus         1 Kp~~C~~~g-C~k~F~~~~-~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVES-CDRRFSRSA-DLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTT-CCCEESSHH-HHHHHTHHHHT
T ss_pred             CCeECCCCC-CCcEECchh-HhhhhcCccCC
Confidence            467784  5 999996655 59999999986

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.0011  Score=40.41  Aligned_cols=31  Identities=6%  Similarity=0.042  Sum_probs=26.4

Q ss_pred             ccccCccCCccccCCchhHHHHhhhcCCCceee
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQGNETEPRVFS   98 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hqr~HtgeKPfs   98 (279)
                      ...|.. |||.|.... .|.+|...|++||||.
T Consensus         5 ~~~ce~-cgk~frdvy-hlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEI-CGKIFRDVY-HLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETT-TTEEESSHH-HHHHHGGGSCSCCCCC
T ss_pred             hhhHHH-HHHHHHHHH-HHHhhhcccCCCCCCC
Confidence            356999 999996655 5999999999999984

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.00098  Score=39.98  Aligned_cols=28  Identities=25%  Similarity=0.627  Sum_probs=23.9

Q ss_pred             ceeecCC--CCcccCCCccccccc-cccCCC
Q 043134           95 RVFSCNY--CQRKFYSSQALGGHQ-NAHKRE  122 (279)
Q Consensus        95 KPfsC~~--CgKsFssssaL~~Hq-r~HtgE  122 (279)
                      |||.|.+  |.|.|+..+....|| |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6899998  999999999999997 777643

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.71  E-value=0.0017  Score=40.45  Aligned_cols=29  Identities=10%  Similarity=0.032  Sum_probs=22.8

Q ss_pred             CcCccccCccCCccccCCchhHHHHhh-hcCC
Q 043134           63 ELNLIDCFKSTDSSQDSLENNDIHRQG-NETE   93 (279)
Q Consensus        63 e~nlf~C~e~CGksFss~ss~L~~Hqr-~Htg   93 (279)
                      .++||.|.. |++.|.... .|..|++ .|+.
T Consensus         5 gekP~~C~~-C~k~F~~~~-~L~~H~~~~H~~   34 (36)
T d2ct1a2           5 GEKPYECYI-CHARFTQSG-TMKMHILQKHTE   34 (36)
T ss_dssp             CCCSEECTT-TCCEESCHH-HHHHHHHHHSSS
T ss_pred             CCCCEeCCC-CcccccchH-HHHHHcccccCC
Confidence            468999999 999997666 5999965 4544

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.60  E-value=0.0025  Score=36.33  Aligned_cols=26  Identities=8%  Similarity=-0.083  Sum_probs=21.5

Q ss_pred             ccccCccCCccccCCchhHHHHhhhcCC
Q 043134           66 LIDCFKSTDSSQDSLENNDIHRQGNETE   93 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~Hqr~Htg   93 (279)
                      +.+|.. |++.|+.+. .|..|+|.|+|
T Consensus         1 phkc~~-c~kcfsrkd-klk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEV-CGKCFSRKD-KLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTT-TTBCCCCHH-HHHHHGGGCCC
T ss_pred             CCccch-hhhHhcchh-HHHHHhhccCC
Confidence            357999 999996655 59999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.0031  Score=37.27  Aligned_cols=27  Identities=7%  Similarity=-0.127  Sum_probs=21.2

Q ss_pred             CccccCc-cCCccccCCchhHHHHhhhcC
Q 043134           65 NLIDCFK-STDSSQDSLENNDIHRQGNET   92 (279)
Q Consensus        65 nlf~C~e-~CGksFss~ss~L~~Hqr~Ht   92 (279)
                      ++|.|.. .|||+|...+ .|.+|+++||
T Consensus         1 rPf~C~~~gC~K~F~~~~-~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQST-NLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTT-TTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHH-HHHHHHhhcc
Confidence            3677752 3999997776 5999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.47  E-value=0.0049  Score=37.42  Aligned_cols=29  Identities=14%  Similarity=0.129  Sum_probs=23.2

Q ss_pred             CccccCc-cCCccccCCchhHHHHhhhcCCC
Q 043134           65 NLIDCFK-STDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        65 nlf~C~e-~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ++|.|.. .|++.|...+ .|.+|+++|+.+
T Consensus         2 rP~~C~~pgC~k~F~r~~-~L~~H~r~Ht~k   31 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNH-DLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSH-HHHHHHGGGTCC
T ss_pred             cCeECcCCCCCCeeCCHH-HHHHHhhhccCC
Confidence            5788862 4999997666 599999999864

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.42  E-value=0.00097  Score=39.19  Aligned_cols=29  Identities=34%  Similarity=0.620  Sum_probs=23.3

Q ss_pred             CceeecCCCCcccCCCccccccccccCCC
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      ++.|.|..|...|...-.|..||-.|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56788888888888888888888888775

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.31  E-value=0.00091  Score=38.43  Aligned_cols=25  Identities=36%  Similarity=0.638  Sum_probs=13.5

Q ss_pred             ecCCCCcccCCCccccccccccCCC
Q 043134           98 SCNYCQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        98 sC~~CgKsFssssaL~~Hqr~HtgE  122 (279)
                      +|..|.|.|.+..-|..|-|.|+||
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.16  E-value=0.001  Score=38.63  Aligned_cols=26  Identities=23%  Similarity=0.507  Sum_probs=22.7

Q ss_pred             ceeecCCCCcccCCCccccccccccC
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNAHK  120 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~Ht  120 (279)
                      |||+|..|...-..++.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68999999988888889999998884

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.43  E-value=0.0026  Score=37.42  Aligned_cols=28  Identities=32%  Similarity=0.628  Sum_probs=20.2

Q ss_pred             ceeecCC--CCcccCCCccccccccccCCC
Q 043134           95 RVFSCNY--CQRKFYSSQALGGHQNAHKRE  122 (279)
Q Consensus        95 KPfsC~~--CgKsFssssaL~~Hqr~HtgE  122 (279)
                      |||-|.+  |.|.|.+-..|.+|.-.|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4666765  777777777777777777765

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.22  E-value=0.0033  Score=37.63  Aligned_cols=26  Identities=27%  Similarity=0.589  Sum_probs=18.5

Q ss_pred             eeecCCCCcccCCCccccccc-cccCC
Q 043134           96 VFSCNYCQRKFYSSQALGGHQ-NAHKR  121 (279)
Q Consensus        96 PfsC~~CgKsFssssaL~~Hq-r~Htg  121 (279)
                      ||.|..|++.|.....|.+|+ ..|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            677888888888777777774 34544

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.18  E-value=0.0081  Score=35.09  Aligned_cols=26  Identities=4%  Similarity=-0.049  Sum_probs=21.6

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNET   92 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~Ht   92 (279)
                      +||.|.. ||+.|..+. ...+|.++|.
T Consensus         2 kPf~C~~-CgrkFArsd-erkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDI-CGRKFARSD-ERKRHTKIHL   27 (28)
T ss_dssp             CCEECTT-TCCEESSHH-HHHHHHGGGC
T ss_pred             CCcccch-hhhhhhcch-hhhhhhhhcc
Confidence            6899999 999996554 5889988884

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.46  E-value=0.014  Score=33.32  Aligned_cols=26  Identities=12%  Similarity=-0.032  Sum_probs=22.4

Q ss_pred             ccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           68 DCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        68 ~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      .|.. |.+.|.++.. |..|.|.|+||+
T Consensus         2 qcp~-c~k~f~skyy-lkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPT-CHKKFLSKYY-LKVHNRKHTGEK   27 (27)
T ss_dssp             CCTT-TCCCCSSHHH-HHHHHHHHSSCC
T ss_pred             cCcc-hHHHHHHhHh-hhhccccccCCC
Confidence            5899 9999977664 999999999985

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.03  E-value=0.0072  Score=38.57  Aligned_cols=27  Identities=22%  Similarity=0.588  Sum_probs=22.8

Q ss_pred             CCCceeecCCCCcccCCCccccccccc
Q 043134           92 TEPRVFSCNYCQRKFYSSQALGGHQNA  118 (279)
Q Consensus        92 tgeKPfsC~~CgKsFssssaL~~Hqr~  118 (279)
                      +|-|||.|..|+|.|-....+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            467899999999999999988888653

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.75  E-value=0.0067  Score=35.86  Aligned_cols=25  Identities=16%  Similarity=0.606  Sum_probs=20.4

Q ss_pred             ceeecCC--CCcccCCCcccccccccc
Q 043134           95 RVFSCNY--CQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        95 KPfsC~~--CgKsFssssaL~~Hqr~H  119 (279)
                      |||.|..  |+|.+...+.|..|++.+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhh
Confidence            5788887  888888888888888754

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.25  E-value=0.013  Score=34.36  Aligned_cols=24  Identities=25%  Similarity=0.634  Sum_probs=18.8

Q ss_pred             ceeecCCCCcccCCCccccccccc
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQNA  118 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr~  118 (279)
                      |||.|.+|.-.-..++.|..|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            578888888887888888888654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.06  E-value=0.072  Score=30.87  Aligned_cols=27  Identities=11%  Similarity=-0.008  Sum_probs=22.5

Q ss_pred             cccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           67 IDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        67 f~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      |.|.. ||..- .+.+.|..|.|.||+++
T Consensus         2 YvC~~-Cg~~C-~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEE-CGIRA-KKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTT-TCCBC-SSHHHHHHHHHHTSSCC
T ss_pred             ccccc-cCccc-CCHHHHHHHHHHhcCCC
Confidence            67999 99887 45567999999999975

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=90.99  E-value=0.055  Score=30.34  Aligned_cols=24  Identities=13%  Similarity=-0.051  Sum_probs=20.1

Q ss_pred             cccCccCCccccCCchhHHHHhhhcC
Q 043134           67 IDCFKSTDSSQDSLENNDIHRQGNET   92 (279)
Q Consensus        67 f~C~e~CGksFss~ss~L~~Hqr~Ht   92 (279)
                      |+|.- |.++|..++ .|.+|+++|.
T Consensus         1 ykcgl-cersfveks-alsrhqrvhk   24 (26)
T d1znfa_           1 YKCGL-CERSFVEKS-ALSRHQRVHK   24 (26)
T ss_dssp             CBCSS-SCCBCSSHH-HHHHHGGGTC
T ss_pred             Ccccc-hHHHHHHHH-HHHHHHHhhc
Confidence            57999 999997665 5999999984

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.47  E-value=0.013  Score=34.08  Aligned_cols=25  Identities=24%  Similarity=0.627  Sum_probs=17.2

Q ss_pred             ceeecCC--CCcccCCCcccccccccc
Q 043134           95 RVFSCNY--CQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        95 KPfsC~~--CgKsFssssaL~~Hqr~H  119 (279)
                      .||+|..  |++.|...+.|++|..+|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677764  777777777777776554

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.67  E-value=0.032  Score=32.47  Aligned_cols=23  Identities=26%  Similarity=0.665  Sum_probs=17.8

Q ss_pred             eeecCCCCcccCCCccccccccc
Q 043134           96 VFSCNYCQRKFYSSQALGGHQNA  118 (279)
Q Consensus        96 PfsC~~CgKsFssssaL~~Hqr~  118 (279)
                      ||.|.+|.-.|.....|..||..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            67788888888888888877753

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.38  E-value=0.097  Score=30.23  Aligned_cols=28  Identities=7%  Similarity=-0.018  Sum_probs=22.6

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ++|+|.- |...-... +.|..|.|.|+|+
T Consensus         2 rpfkcql-csy~srns-sqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQI-CPYASRNS-SQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSS-SSCEESSH-HHHHHHHTTCCSC
T ss_pred             Ccceeee-cccccCCc-hheEEeeecccCc
Confidence            5899999 98876444 4699999999984

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.81  E-value=0.022  Score=39.93  Aligned_cols=38  Identities=32%  Similarity=0.612  Sum_probs=30.9

Q ss_pred             CceeecCCCCcccCCCccccccccccCCCchhhhhcCCCC
Q 043134           94 PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRIS  133 (279)
Q Consensus        94 eKPfsC~~CgKsFssssaL~~Hqr~HtgERpy~kr~~~~~  133 (279)
                      ...|.|..|.-.|-+...|..|.+.|..|  |+||++|+.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hnee--fqkra~rqe   53 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNEE--FQKRAKRQE   53 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHH--HHHHCCCCS
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccHH--HHHHHHHHH
Confidence            34699999999999999999999998655  777776654

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.52  E-value=0.05  Score=33.91  Aligned_cols=27  Identities=26%  Similarity=0.629  Sum_probs=20.1

Q ss_pred             CCceeec--CCCCcccCCCcccccccccc
Q 043134           93 EPRVFSC--NYCQRKFYSSQALGGHQNAH  119 (279)
Q Consensus        93 geKPfsC--~~CgKsFssssaL~~Hqr~H  119 (279)
                      .+|||.|  .-|+..|.+...|..|+.-|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            3788888  45888888888887776544

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.10  E-value=0.18  Score=28.81  Aligned_cols=27  Identities=7%  Similarity=0.023  Sum_probs=22.0

Q ss_pred             cCccccCccCCccccCCchhHHHHhhhcC
Q 043134           64 LNLIDCFKSTDSSQDSLENNDIHRQGNET   92 (279)
Q Consensus        64 ~nlf~C~e~CGksFss~ss~L~~Hqr~Ht   92 (279)
                      +++++|.. |...-...+ .|..|+|+|.
T Consensus         1 vkp~kck~-cdyaaadss-sl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKT-CDYAAADSS-SLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSS-SCCEESSHH-HHHHHHHHSC
T ss_pred             CCCccccc-ccchhcchh-hHhhhhhccc
Confidence            36899999 999875555 5999999985

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.07  E-value=0.23  Score=30.71  Aligned_cols=29  Identities=10%  Similarity=-0.056  Sum_probs=23.6

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCCc
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEPR   95 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~HtgeK   95 (279)
                      +.|.|.. |++.|.+.. .|--|++.|..++
T Consensus         4 r~~~C~~-C~k~F~s~q-ALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSF-CKREFRSAQ-ALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTT-TCCEESSHH-HHHHHHHTTCCSC
T ss_pred             CccCCCC-CCCccCCcc-cccchHhhhcchH
Confidence            4589999 999996554 5999999997664

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.80  E-value=0.2  Score=28.99  Aligned_cols=28  Identities=7%  Similarity=-0.037  Sum_probs=23.3

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ..|.|.. |...|..+- .|..|+-.|+|+
T Consensus         3 qvftcs~-cqe~f~rrm-elr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSV-CQETFRRRM-ELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSS-SCCEESSHH-HHHHHHHHHSSS
T ss_pred             ceEEeHH-HHHHHHHHH-hheeeeecccCC
Confidence            4689999 999996554 589999999985

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=83.76  E-value=0.2  Score=29.63  Aligned_cols=26  Identities=12%  Similarity=-0.012  Sum_probs=19.2

Q ss_pred             ccccCccCCccccCCchhHHHH-hhhcCC
Q 043134           66 LIDCFKSTDSSQDSLENNDIHR-QGNETE   93 (279)
Q Consensus        66 lf~C~e~CGksFss~ss~L~~H-qr~Htg   93 (279)
                      ||.|.. |++.|+.+. .|.+| ++.|.|
T Consensus         1 Pf~C~~-C~R~FaRrD-LlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGL-CNRAFTRRD-LLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTT-TCCEESSHH-HHHHHHTTTSCC
T ss_pred             Cccccc-ccchhhHHH-HHHHHHHHHhcC
Confidence            688999 999997666 46666 455655

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.73  E-value=0.063  Score=31.25  Aligned_cols=23  Identities=35%  Similarity=0.687  Sum_probs=18.7

Q ss_pred             ceeecCCCCcccCCCcccccccc
Q 043134           95 RVFSCNYCQRKFYSSQALGGHQN  117 (279)
Q Consensus        95 KPfsC~~CgKsFssssaL~~Hqr  117 (279)
                      +||+|.+|.-.-.+.++|..|+.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHH
Confidence            68999999777777888888864

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.57  E-value=0.2  Score=29.48  Aligned_cols=28  Identities=4%  Similarity=-0.090  Sum_probs=22.8

Q ss_pred             CccccCccCCccccCCchhHHHHhhhcCCC
Q 043134           65 NLIDCFKSTDSSQDSLENNDIHRQGNETEP   94 (279)
Q Consensus        65 nlf~C~e~CGksFss~ss~L~~Hqr~Htge   94 (279)
                      ++|.|.. |+..|..+. -...|.|.|.|.
T Consensus         2 kp~~cpi-c~qrfkrkd-rmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPV-CGLRFKRKD-RMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETT-TTEECSCHH-HHHHHHHHHSCC
T ss_pred             CCcccch-HHHHhhccc-cceEeeecccCc
Confidence            6899999 999997665 478888888764