Citrus Sinensis ID: 043190

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490--
VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRLHQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVEQSVI
cccccccEEEEEEEcccccHHHHHHHHcccccccEEEcccccccccCEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccHHHHHHHHHcEEEEccccccHHHHHHHHHHHccccEEEEEccccccccccccEEEEEccccEEccccccccccHHHHHHcccccccccccCEEEEEcccccHHHHHHHHcccccccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEcccccEEcccHHHHHHcccccHHHHHHHHHHHcccccHHHHHHHHccccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccccHHHHHHccHHHHHHHHcccccHHHHHHHHHcccccEEEEEEEEccccEEEEEEEECccccccccccccccEEEEEEEccccccEEEcccccccccccccccEEEEEEEEccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccHHHHHHHHHHccccccEEEEcccccccHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccEEEEcccccHHHHccccccccccEEEEEEEEcccccccccccHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHccccccCEcccccccccccEEEEECccccccHHHHHHccHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccHHHHHHHHccEEEEcccccHHHHHHHHHHHHccccEEEEEcccccccccccccEEEEccCEEECccccccccccHHHHHHHHcccccccccccCEEEEEEccccHHHHHHHHcccccEEEcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEccccCCccccHHHHHHccccHHHHHHHHHcccccccHHHHHHHHccccccccccccccHHHHHHHHcccccECccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHcccccHHHHHcccHHHHHHHccccccccHHHHHcccccEEEEEEEEccccccccEEEEEEEEEEcccccccccEEEccccccccccEEEEEEEccccEEEEEEEEEccccEEEEEEECcccccccCEEEEEEEcccccccCEEEEEEEEEcccc
*****RMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLG****DLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRLHQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVEQS**
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VESTQRMIRIVGLSATLPNYLEVAQFLRVNPEMGLFFFDSSYRPIPLAQQYIGISEPNFAARNELLSEICYKKVVDSLRQGHQAMVFVHSRKDTVKTAQKLVDLARRYEDLEVFNNDTHPQLSLIKKDVMKSRNKDLIELFGLAVGVHHAGMLRSDRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDIFGRAGRPQFDRSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLSIRMKLNPLAYGIGWDEVIADPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEVIEMVSHSSEFENIVVRDEEQNELETLVQTLCPVEVKGGPSNKHGKISILIQLYISRGWIDTFSLVSDAAYISASLARIMRALFETCLRRGWCEMSLFMLEYCKAVDRQIWPHQHPLRQFDKELPAEILRKLEERGADLDRLQEMEEKDIGALIRYTPGGRLVKQYLGYFPSIQLSATVSPITRTVLKIGLAITPEFTWKDHFHGAAQRWWIIVQDSESDHIYHSELFTLTKRMARGETQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYCISFHNLALPQARTSHTELLDLKPLPVTALGNNIYEALYNFSHFNPIQTQIFHILYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQSDMKVVYIAPLKAIVRERMNDWKDRLVSQLGKEMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRNYVKKVGLMILDEIHLLGAERGPILEVIVSRMRYISSQTERAVRFIGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDETPRQFLGMPEEDLQMVLSQVTDQNLRQTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRDQLHDHFNAEIVSGTIFHKEDAVHYLSWTYLFRRLAINPAYYGLEDTEAEGLSSYLSRLVQNTFEDLEDSGCVKMTEDTVEPTMLGTIASQYYLSYVTVSMFGSNIGPDTSLEVFLHILSGASEYDELPVRHNEDNHNEALSQRVRFAVDNNRLDDPHVKANLLFQAHFSRLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMHLLQMVMQGLWFEQDSALWMFPCMNNDLLGTLRARGISTVQQLLDIPKENLQTVIGNFPVSRLHQDLQRFPRIQVKLRLQRRDIDGENSLTLNIRMDKMNSWKNTSRAFALRFPKIKDEAWWLVLGNTNTSELYALKRISFSDRLNTHMELPSGITTFQGMKLVVVSDCYLGFEQEHSIEALVEQSVI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Activating signal cointegrator 1 complex subunit 3 3'-5' DNA helicase involved in repair of alkylated DNA. Promotes DNA unwinding to generate single-stranded substrate needed for alkhb3, enabling alkhb3 to process alkylated N3-methylcytosine (3mC) within double-stranded regions.probableE7F8F4
Activating signal cointegrator 1 complex subunit 3 3'-5' DNA helicase involved in repair of alkylated DNA. Promotes DNA unwinding to generate single-stranded substrate needed for alkhb3, enabling alkhb3 to process alkylated N3-methylcytosine (3mC) within double-stranded regions.probableF1NTD6
Activating signal cointegrator 1 complex subunit 3 3'-5' DNA helicase involved in repair of alkylated DNA. Promotes DNA unwinding to generate single-stranded substrate needed for ALKHB3, enabling ALKHB3 to process alkylated N3-methylcytosine (3mC) within double-stranded regions. Enhances NF-kappa-B, SRF and AP1 transactivation.probableE1BNG3

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.6.-.-Acting on acid anhydrides.probable
3.6.4.-Acting on acid anhydrides; involved in cellular and subcellular movement.probable
3.6.4.13RNA helicase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4A4Z, chain A
Confidence level:very confident
Coverage over the Query: 683-898
View the alignment between query and template
View the model in PyMOL
Template: 4A4Z, chain A
Confidence level:very confident
Coverage over the Query: 66-106,117-257
View the alignment between query and template
View the model in PyMOL
Template: 2VA8, chain A
Confidence level:very confident
Coverage over the Query: 684-1026,1040-1126,1147-1375
View the alignment between query and template
View the model in PyMOL
Template: 2P6R, chain A
Confidence level:very confident
Coverage over the Query: 5-293,313-545
View the alignment between query and template
View the model in PyMOL
Template: 3IM1, chain A
Confidence level:very confident
Coverage over the Query: 1168-1488
View the alignment between query and template
View the model in PyMOL
Template: 2Q0Z, chain X
Confidence level:very confident
Coverage over the Query: 369-652
View the alignment between query and template
View the model in PyMOL
Template: 4F92, chain B
Confidence level:very confident
Coverage over the Query: 669-1485
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
4f92, chain Bvery confident Alignment | Template Structure