Citrus Sinensis ID: 043360
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1108 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LY77 | 1033 | Calcium-transporting ATPa | yes | no | 0.794 | 0.851 | 0.336 | 1e-131 | |
| Q9LF79 | 1074 | Calcium-transporting ATPa | no | no | 0.774 | 0.798 | 0.306 | 1e-115 | |
| Q9SZR1 | 1069 | Calcium-transporting ATPa | no | no | 0.763 | 0.791 | 0.309 | 1e-105 | |
| Q9LU41 | 1086 | Calcium-transporting ATPa | no | no | 0.766 | 0.781 | 0.295 | 1e-101 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.759 | 0.820 | 0.269 | 2e-88 | |
| Q9LIK7 | 1017 | Putative calcium-transpor | no | no | 0.516 | 0.562 | 0.349 | 3e-88 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.763 | 0.821 | 0.265 | 7e-87 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.743 | 0.810 | 0.270 | 3e-86 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 0.753 | 0.803 | 0.268 | 9e-86 | |
| Q65X71 | 1021 | Probable calcium-transpor | no | no | 0.760 | 0.825 | 0.274 | 1e-83 |
| >sp|Q9LY77|ACA12_ARATH Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 323/960 (33%), Positives = 497/960 (51%), Gaps = 80/960 (8%)
Query: 181 LDRIVKARNLNLLKEIGGPEKVASAFGSHLEHGIQGDQLPQPQIW-----NTIKPNHARE 235
L I+K ++L ++ +GG E VA++ ++ GI G++ + NT +
Sbjct: 93 LVEIMKGKDLPGIQALGGVEGVAASLRTNPTKGIHGNEQEVSRRRDLFGSNTYHKPPPKG 152
Query: 236 FFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNF 295
F+ +A + IL+LLV A S G E G K+GW++G +I +AVF+++ A++NF
Sbjct: 153 LLFFVYEAFKDLTILILLVCAIFSLGFGIKEHGIKEGWYEGGSIFVAVFLVIVVSALSNF 212
Query: 296 RRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDG 355
R+ R+ +K + N ++V+V+R R Q I++ +++ GDVV L GD++P DGL +
Sbjct: 213 RQERQFDKLS-KISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKIGDQIPADGLFLEGHS 271
Query: 356 LMLDDVLNS------EIDPDRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVL------- 402
L +D+ + E+D NPFLFSG+K+++G ML++SVG + GQ +
Sbjct: 272 LQVDESSMTGESDHLEVDHKDNPFLFSGTKIVDGFAQMLVVSVGMSTTWGQTMSSINQDS 331
Query: 403 --RSNLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGK 460
R+ L + + L + + I L + GN K +R +
Sbjct: 332 SERTPLQVRLDTLTSTIGKIGLTVAALVLVVLLVRYFTGNTE-----KEGKREYNGSKTP 386
Query: 461 ISILVSALT--------VVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMG 512
+ +V+++ +V +A+ G+P +T++L + + K +++ A + LSA TMG
Sbjct: 387 VDTVVNSVVRIVAAAVTIVVVAIPEGLPLAVTLTLAY-SMKRMMSDQAMVRKLSACETMG 445
Query: 513 IASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIG----ASVLV 568
A+VIC D TG L N + V+KF +G++ ++ D I+ VL L +G G SV V
Sbjct: 446 SATVICTDKTGTLTLNEMKVTKFWLGQESIHEDSTKMISPDVLDLLYQGTGLNTTGSVCV 505
Query: 569 ------PEISLWPTTDWLVSWAK-SRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKING 621
PE S PT L+SW + +++E V Q VL SS K GVLV+
Sbjct: 506 SDSGSTPEFSGSPTEKALLSWTVLNLGMDMESVKQKHEVLRVETFSSAKKRSGVLVR--- 562
Query: 622 GDEDKIMHMHWSGTASTILNMCSYYYDSEGK-SFEIKGEKRRFQKLIKDMEDSGLRPIAF 680
D +H+HW G A +L MCS+YY S G K R Q +I+ M S LR IAF
Sbjct: 563 RKSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGMAASSLRCIAF 622
Query: 681 ACG-QTEVSEIKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEV 735
A + S ++E+GL L+ + GL++ + VE + AGV I +++ D + +
Sbjct: 623 AHKIASNDSVLEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAI 682
Query: 736 ACELG---NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEK 792
A E G + + D +EG QFR ERM K+D + +M DKLL+V+ ++ K
Sbjct: 683 AFECGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLK 742
Query: 793 GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRC 850
GHVVA G T D PALKEAD+G++ + TE+A+E SDIVI S+ +LK GRC
Sbjct: 743 GHVVAV-TGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRC 801
Query: 851 AYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFK 910
Y NIQKF + QLT + L+I + + E P+T++QL+WV IM LG L + E
Sbjct: 802 VYNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERP 861
Query: 911 DQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFN 970
E + P RT++L+ VMW++ VQ L Q+ V LI QF G I + ++++ + FN
Sbjct: 862 TNELLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEVKDTLIFN 921
Query: 971 SFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNG 1030
+F LCQVFN+F+A + KK V + + + + I I QV++VEF A RLNG
Sbjct: 922 TFVLCQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNG 981
Query: 1031 MQWGICFILAVLPWGIHRAVNFIADSFLDRSLSGILRLEFSRRQQHRPYVSFLSIPFSMF 1090
QWG C LA L W I FI S P++S+ P S+F
Sbjct: 982 WQWGTCIALASLSWPIGFFTKFIPVS-------------------ETPFLSYFKNPRSLF 1022
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 291/950 (30%), Positives = 482/950 (50%), Gaps = 92/950 (9%)
Query: 176 ILPDLLDRIVKARNLNLLKEIGGPEKVASAFGSHLEHGIQGDQ---LPQPQIW--NTIKP 230
I P+ L + K N L++ GG + +A+ ++ E GI GD L + I+ NT
Sbjct: 116 ITPEQLVIMSKDHNSGALEQYGGTQGLANLLKTNPEKGISGDDDDLLKRKTIYGSNTYPR 175
Query: 231 NHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFP 290
+ F FL A ++ +++L+VAA S G +G K+GW+DG +I AV +++
Sbjct: 176 KKGKGFLRFLWDACHDLTLIILMVAAVASLALGIKTEGIKEGWYDGGSIAFAVILVIVVT 235
Query: 291 AVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLV 350
AV++++++ + + +EK + ++V+R GR I++ +++ GDV+ L G++VP DG++
Sbjct: 236 AVSDYKQSLQFQNLN-DEKRNIHLEVLRGGRRVEISIYDIVVGDVIPLNIGNQVPADGVL 294
Query: 351 VNSDGLMLDD--------VLNSEIDPDRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVL 402
++ L LD+ ++N D +++PFL SG KV +G+G+ML+ VG N G ++
Sbjct: 295 ISGHSLALDESSMTGESKIVNK--DANKDPFLMSGCKVADGNGSMLVTGVGVNTEWGLLM 352
Query: 403 RS-----------------------NLSLAVTVLIALVALIRLLWRKHSGDDHELPE-LK 438
S ++ LAV + ++ L R + H+ D++ P+ +K
Sbjct: 353 ASISEDNGEETPLQVRLNGVATFIGSIGLAVAAAVLVILLTRY-FTGHTKDNNGGPQFVK 411
Query: 439 GNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINH 498
G VG V+ + +L A+T+V +AV G+P +T++L + K++ +
Sbjct: 412 GKTKVGHVIDDV----------VKVLTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK 461
Query: 499 HAKPQNLSAGATMGIASVICIDVTGGLVCNRVDV-SKFCIGEKDVNNDVASEINQAVLQA 557
A + LSA TMG A+ IC D TG L N++ V + G+K + + I V++
Sbjct: 462 -ALVRRLSACETMGSATTICSDKTGTLTLNQMTVVESYAGGKKTDTEQLPATITSLVVEG 520
Query: 558 LERGIGASVLVPE------ISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNK 611
+ + S+ VPE S PT ++ W +N E S+L +S K
Sbjct: 521 ISQNTTGSIFVPEGGGDLEYSGSPTEKAILGWGVKLGMNFETARSQSSILHAFPFNSEKK 580
Query: 612 VCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQK-LIKDM 670
GV VK G+ +H+HW G + +L C Y D +G + +K F K I DM
Sbjct: 581 RGGVAVKTADGE----VHVHWKGASEIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDM 636
Query: 671 EDSGLRPIAFACGQTEVSEIK-----------ENGLHLLALAGLREE----IKSTVEALR 715
LR +A A E ++ E+ L LLA+ G+++ +K +V +
Sbjct: 637 AGRTLRCVALAFRTYEAEKVPTGEELSKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQ 696
Query: 716 NAGVRIILVSEDELLAVTEVACELGNFRPE---SNDIALEGEQFRELNSTERMAKLDSMT 772
NAGV++ +V+ D + +A E G + S +EG+ FRE+ ER D ++
Sbjct: 697 NAGVKVRMVTGDNVQTARAIALECGILSSDADLSEPTLIEGKSFREMTDAERDKISDKIS 756
Query: 773 LMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD 832
+MG +DKLLLVQS++ +GHVVA G T D PAL EAD+G+ TE+A+E SD
Sbjct: 757 VMGRSSPNDKLLLVQSLRRQGHVVAVTG-DGTNDAPALHEADIGLAMGIAGTEVAKESSD 815
Query: 833 IVI--SAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQL 890
I+I S++ +++ GR Y NIQKF + QLT + L+I +V + + P+T++QL
Sbjct: 816 IIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQL 875
Query: 891 IWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQ 950
+WV IM LG L + E + PP R + L+ +MW++ +Q + QV V L
Sbjct: 876 LWVNLIMDTLGALALATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLN 935
Query: 951 FAGQVIPGMNRDIRKAMT-------FNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLM 1003
F G I G+ ++ + T FN+F LCQ FN+F+A + +K + V+K +
Sbjct: 936 FRGISILGLEHEVHEHATRVKNTIIFNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMG 995
Query: 1004 VFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFI 1053
+ +I + QV++VEF A +LN QW IC + V+ W + FI
Sbjct: 996 IIVITLVLQVIIVEFLGKFASTTKLNWKQWLICVGIGVISWPLALVGKFI 1045
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 288/930 (30%), Positives = 473/930 (50%), Gaps = 84/930 (9%)
Query: 184 IVKARNLNLLKEIGGPEKVASAFGSHLEHGIQGDQ---LPQPQIW--NTIKPNHAREFFL 238
I + +N+ L+E+GG ++ ++LE GI GD L + + NT R F+
Sbjct: 124 ISRDQNIGALQELGGVRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTYPQKKGRSFWR 183
Query: 239 FLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRA 298
F+ +AS + +++L+VAA S G +G + GW+DG +I AV +++ A +++R++
Sbjct: 184 FVWEASQDLTLIILIVAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSDYRQS 243
Query: 299 RKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLML 358
+ + EEK + ++V R GR I++ +++ GDV+ L GD+VP DG++V L +
Sbjct: 244 LQFQNLN-EEKRNIRLEVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHSLAV 302
Query: 359 DD---VLNSEI---DPDRNPFLFSGSKVMEGHGTMLLISVGGNIASG------------- 399
D+ S+I + ++PFL SG KV +G+GTML+ VG N G
Sbjct: 303 DESSMTGESKIVQKNSTKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDNGGE 362
Query: 400 ---QVLRSNLSLAVTVL---IALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERF 453
QV + ++ + ++ +A V L L+ R +G H E G +G K FE
Sbjct: 363 TPLQVRLNGVATFIGIVGLTVAGVVLFVLVVRYFTG--HTKNEQGGPQFIGGKTK-FEHV 419
Query: 454 LLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGI 513
L + I A+T+V +AV G+P +T++L + K++ + A + LSA TMG
Sbjct: 420 L---DDLVEIFTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK-ALVRRLSACETMGS 475
Query: 514 ASVICIDVTGGLVCNRVDVSKFCIGEKDVNN-DVASEINQAVLQALERGIG----ASVLV 568
A+ IC D TG L N + V + G + +++ D +S++ A L GI SV
Sbjct: 476 ATTICSDKTGTLTLNEMTVVECYAGLQKMDSPDSSSKLPSAFTSILVEGIAHNTTGSVFR 535
Query: 569 PE-----ISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGD 623
E +S PT +++WA ++ + + S ++ +S K GV VK
Sbjct: 536 SESGEIQVSGSPTERAILNWAIKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVK----S 591
Query: 624 EDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRR--FQKLIKDMEDSGLRPIAFA 681
D +H+HW G A +L C++Y D E +SF E + + I DM LR +A A
Sbjct: 592 PDSSVHIHWKGAAEIVLGSCTHYMD-ESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIA 650
Query: 682 CGQTEVS------------EIKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVS 725
E E+ E+ L LLA+ G+++ +K++V + AGV++ +V+
Sbjct: 651 FRTFEADKIPTDEEQLSRWELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVT 710
Query: 726 EDELLAVTEVACELGNFRPESNDIA---LEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782
D + +A E G +S+ +EG+ FR + ER + +++MG +DK
Sbjct: 711 GDNIQTAKAIALECGILASDSDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDK 770
Query: 783 LLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGS 840
LLLVQS+K +GHVVA G T D PAL EAD+G+ + TE+A+E SDI+I S
Sbjct: 771 LLLVQSLKRRGHVVAVTG-DGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFES 829
Query: 841 LLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYML 900
++ +++ GR Y NIQKF + QLT + L+I +V + E P+T++QL+WV IM L
Sbjct: 830 VVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTL 889
Query: 901 GGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVI---- 956
G L + E + P R + L+ +MW++ +Q + QV V LI F G I
Sbjct: 890 GALALATEPPTDHLMDRAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLK 949
Query: 957 --PGMNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVL 1014
P R ++ + FN+F +CQVFN+F+A + + + VL+ + + I I QV+
Sbjct: 950 SKPNAER-VKNTVIFNAFVICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVV 1008
Query: 1015 VVEFATSLAGYQRLNGMQWGICFILAVLPW 1044
+VEF + A +L+ W +C + + W
Sbjct: 1009 IVEFLGTFASTTKLDWEMWLVCIGIGSISW 1038
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 278/940 (29%), Positives = 471/940 (50%), Gaps = 91/940 (9%)
Query: 179 DLLDRIVKARNLNL--LKEIGGPEKVASAFGSHLEHGIQGDQ---LPQPQIW--NTIKPN 231
DL + RN N+ L++ GG + VA S++E GI D+ + + + NT
Sbjct: 131 DLEKLVSMTRNQNMSNLQQYGGVKGVAEKLKSNMEQGINEDEKEVIDRKNAFGSNTYPKK 190
Query: 232 HAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPA 291
+ FF+FL +A + +++L++AA S G +G K+GW DG +I AV +++ A
Sbjct: 191 KGKNFFMFLWEAWQDLTLIILIIAAVTSLALGIKTEGLKEGWLDGGSIAFAVLLVIVVTA 250
Query: 292 VTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVV 351
V+++R++ + + +EK ++++V+R GR I++ +++ GDV+ L GD+VP DG+++
Sbjct: 251 VSDYRQSLQFQNLN-DEKRNIQLEVMRGGRTVKISIYDVVVGDVIPLRIGDQVPADGVLI 309
Query: 352 NSDGLMLDD---VLNSEI--DPDRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRS-- 404
+ L +D+ S+I ++PFL SG KV +G G ML+ VG N G ++ S
Sbjct: 310 SGHSLAIDESSMTGESKIVHKDQKSPFLMSGCKVADGVGNMLVTGVGINTEWGLLMASIS 369
Query: 405 -------NLSLAVTVLIALVALI----------RLLWRKHSGDDHELPE----LKGNVSV 443
L + + L + ++ LL R +G + +KG S+
Sbjct: 370 EDTGEETPLQVRLNGLATFIGIVGLSVALVVLVALLVRYFTGTTQDTNGATQFIKGTTSI 429
Query: 444 GTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQ 503
++ + I A+T+V +AV G+P +T++L + K++ + A +
Sbjct: 430 SDIV----------DDCVKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADK-ALVR 478
Query: 504 NLSAGATMGIASVICIDVTGGLVCNRVDV-SKFCIGEKDVNNDVASEINQAVLQALERGI 562
LSA TMG A+ IC D TG L N++ V + G K D S ++ ++ + G+
Sbjct: 479 RLSACETMGSATTICSDKTGTLTLNQMTVVETYAGGSKMDVADNPSGLHPKLVALISEGV 538
Query: 563 G----ASVLVP------EISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKV 612
++ P EIS PT ++SWA + + + +++ +S K
Sbjct: 539 AQNTTGNIFHPKDGGEVEISGSPTEKAILSWAYKLGMKFDTIRSESAIIHAFPFNSEKKR 598
Query: 613 CGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMED 672
GV V + G E + +HW G A +L C+ Y DS G I+ +K F+ I M
Sbjct: 599 GGVAV-LRGDSE---VFIHWKGAAEIVLACCTQYMDSNGTLQSIESQKEFFRVAIDSMAK 654
Query: 673 SGLRPIAFACGQTEVSEIK------------ENGLHLLALAGLREEIKSTV-EALR---N 716
+ LR +A AC E++++ E+ L LLA+ G+++ + V EA+R +
Sbjct: 655 NSLRCVAIACRTQELNQVPKEQEDLDKWALPEDELILLAIVGIKDPCRPGVREAVRICTS 714
Query: 717 AGVRIILVSEDELLAVTEVACELGNFRPESNDIA---LEGEQFRELNSTERMAKLDSMTL 773
AGV++ +V+ D L +A E G ++ + +EG+ FREL+ ER +T+
Sbjct: 715 AGVKVRMVTGDNLQTAKAIALECGILSSDTEAVEPTIIEGKVFRELSEKEREQVAKKITV 774
Query: 774 MGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI 833
MG +DKLLLVQ++++ G VVA G T D PAL EAD+G++ TE+A+E SDI
Sbjct: 775 MGRSSPNDKLLLVQALRKNGDVVAV-TGDGTNDAPALHEADIGLSMGISGTEVAKESSDI 833
Query: 834 VI--SAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLI 891
+I S++ +++ GR Y NIQKF + QLT + L+I +V + + P+ ++QL+
Sbjct: 834 IILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLL 893
Query: 892 WVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQF 951
WV IM LG L + E + P R + L+ +MW++ VQ QV V L+ F
Sbjct: 894 WVNLIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNF 953
Query: 952 AGQVIPGMNR-------DIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMV 1004
AG I G+N +++ M FN+F +CQ+FN+F+A + + V V K + +
Sbjct: 954 AGLSILGLNHENHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNVFRGVNKNPLFVAI 1013
Query: 1005 FLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVLPW 1044
+ Q+++V F A RL W I+ ++ W
Sbjct: 1014 VGVTFILQIIIVTFLGKFAHTVRLGWQLWLASIIIGLVSW 1053
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 252/936 (26%), Positives = 449/936 (47%), Gaps = 95/936 (10%)
Query: 168 EEEKSEDRILPDLLDRIVKARNLNLLKEIGGPEKVASAFGSHLEHGIQGDQLP-QPQIW- 225
E +K+ + D L +V+ + L +IGGPE +A L G++ +L + +I+
Sbjct: 87 EVKKAGFYVEADELASMVRNHDTKSLTKIGGPEGIAQKVSVSLAEGVRSSELHIREKIYG 146
Query: 226 -NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVF 284
N AR F F+ +A + +++L+V A +S G +G G +DG IL+++
Sbjct: 147 ENRYTEKPARSFLTFVWEALQDITLIILMVCAVVSIGVGVATEGFPKGMYDGTGILLSII 206
Query: 285 VLLTFPAVTNFRRA---RKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKG 341
+++ A+++++++ R L++ EK K+ ++V R G Q +++ +L+ GDVV L+ G
Sbjct: 207 LVVMVTAISDYKQSLQFRDLDR----EKKKIIIQVTRDGSRQEVSIHDLVVGDVVHLSIG 262
Query: 342 DRVPGDGLVVNSDGLMLDD-VLNSEIDPD----RNPFLFSGSKVMEGHGTMLLISVGGNI 396
D+VP DG+ ++ L +D+ L+ E +P PFL SG+KV G ML+ +VG
Sbjct: 263 DQVPADGIFISGYNLEIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRT 322
Query: 397 ASGQVLRS-----------------------NLSLAVTVLIALVALIRLLWRKHSGDDHE 433
G+++ + + L VL +V IR + K +
Sbjct: 323 EWGKLMDTLSEGGEDETPLQVKLNGVATIIGKIGLGFAVLTFVVLCIRFVVEKATA---- 378
Query: 434 LPELKGNV---SVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFW 490
G++ S + + + F + A+T++ +AV G+P +T+SL F
Sbjct: 379 -----GSITEWSSEDALTLLDYFAI-----------AVTIIVVAVPEGLPLAVTLSLAFA 422
Query: 491 NDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCI-------GEKDVN 543
K L++ A ++L+A TMG ++ IC D TG L N + V+K I E++
Sbjct: 423 M-KQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICENIKERQEENFQ 481
Query: 544 NDVASEINQAVLQALERGIGASVL-----VPEISLWPTTDWLVSWAKSRSLNVEFVDQNL 598
+++ ++ ++QA+ + G+ V+ +I PT ++ + +V+ +
Sbjct: 482 LNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAILEFGLLLGGDVDTQRREH 541
Query: 599 SVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKG 658
+L+ +S+ K VL +GG + G + +L MC DS G+S +
Sbjct: 542 KILKIEPFNSDKKKMSVLTSHSGGK----VRAFCKGASEIVLKMCEKVVDSNGESVPLSE 597
Query: 659 EK-RRFQKLIKDMEDSGLRPIAFA---CGQTEVSEIKENGLHLLALAGLREE----IKST 710
EK +I+ LR + + ++ G L+A+ G+++ ++
Sbjct: 598 EKIASISDVIEGFASEALRTLCLVYTDLDEAPRGDLPNGGYTLVAVVGIKDPVRPGVREA 657
Query: 711 VEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDS 770
V+ + AG+ + +V+ D + +A E G + +A+EG FR L E A L
Sbjct: 658 VQTCQAAGITVRMVTGDNISTAKAIAKECGILT--AGGVAIEGSDFRNLPPHEMRAILPK 715
Query: 771 MTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAREC 830
+ +M L DK LV ++++ G VVA G T D PAL EAD+G+ TE+A+E
Sbjct: 716 IQVMARSLPLDKHTLVNNLRKMGEVVA-VTGDGTNDAPALHEADIGLAMGIAGTEVAKEN 774
Query: 831 SDIVI--SAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSI 888
+D++I +++ + K GR Y NIQKF + QLT L+I V+ I +P+T++
Sbjct: 775 ADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAV 834
Query: 889 QLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLI 948
QL+WV IM LG L + E ++ + P RT S + + MW++ Q + Q+ V I
Sbjct: 835 QLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNIIGQSIYQLIVLGI 894
Query: 949 FQFAGQVIPGMNRD----IRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMV 1004
FAG+ I +N + + FNSF CQVFN+ ++ + K V + K + + V
Sbjct: 895 LNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQVFNEVNSREIEKINVFEGMFKSWVFVAV 954
Query: 1005 FLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILA 1040
+ QV++VEF + A L+ W +C ++
Sbjct: 955 MTATVGFQVIIVEFLGAFASTVPLSWQHWLLCILIG 990
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 327 bits (839), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 210/601 (34%), Positives = 328/601 (54%), Gaps = 29/601 (4%)
Query: 469 TVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCN 528
T++ +A+ G+P +T++L + + K ++ +A + LSA TMG A+VIC D TG L N
Sbjct: 399 TIIVVAIPEGLPLAVTLTLAY-SMKRMMKDNAMVRKLSACETMGSATVICTDKTGTLTLN 457
Query: 529 RVDVSKFCIGEKDVNNDVASEINQAVLQALERGIG----ASVLVP------EISLWPTTD 578
++ V+ F G + + AS ++Q V++ +G+ SV E S PT
Sbjct: 458 QMKVTDFWFG---LESGKASSVSQRVVELFHQGVAMNTTGSVFKAKAGTEYEFSGSPTEK 514
Query: 579 WLVSWA-KSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTAS 637
++SWA + + +E V + V+ +S K GVL+K G + + + +HW G A
Sbjct: 515 AILSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKRSGVLMKKKGVNTENNV-VHWKGAAE 573
Query: 638 TILNMCSYYYDSEGKSFEIK-GEKRRFQKLIKDMEDSGLRPIAFACGQ--TEVSEIKENG 694
IL MCS + D G E+K +K +F+K+I+ M LR IAFA + + ++KE
Sbjct: 574 KILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAKSLRCIAFAYSEDNEDNKKLKEEK 633
Query: 695 LHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE---SN 747
L LL + G+++ +K VE + AGV I +++ D + +A E G PE ++
Sbjct: 634 LSLLGIIGIKDPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAIAVECGILTPEDEMNS 693
Query: 748 DIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDT 807
+ LEGE+FR ER+ K++ + +M DKLL+V+ +KE GHVVA G T D
Sbjct: 694 EAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKELGHVVAV-TGDGTNDA 752
Query: 808 PALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQKFTKLQLTG 865
PALKEAD+G++ + TE+A+E SDIVI S+ +LK GRC Y NIQKF + QLT
Sbjct: 753 PALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTV 812
Query: 866 CASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKS 925
+ L+I V + + P+T++QL+WV IM LG L + E + + P R
Sbjct: 813 NVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKPIGRVAP 872
Query: 926 LLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMR 985
L+ +MW++ Q Q+ V L+ QF G+ I + ++ + FN+F LCQVFN+F+A
Sbjct: 873 LITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNVTEKVKNTLIFNTFVLCQVFNEFNARS 932
Query: 986 LLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVLPWG 1045
L KK V + K + + ++ + QV++VEF A +RLN QWG+C +A W
Sbjct: 933 LEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQWGVCIAIAAASWP 992
Query: 1046 I 1046
I
Sbjct: 993 I 993
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 323 bits (827), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 249/938 (26%), Positives = 448/938 (47%), Gaps = 92/938 (9%)
Query: 168 EEEKSEDRILPDLLDRIVKARNLNLLKEIGGPEKVASAFGSHLEHGIQGDQLP-QPQIW- 225
E +K+ I D L +V+ + L + GG E++A L GI+ ++P + +I+
Sbjct: 87 EVKKAGFSIEADELASMVRKNDTKSLAQKGGVEELAKKVSVSLSEGIRSSEVPIREKIFG 146
Query: 226 -NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVF 284
N AR F +F+ +A ++ +++L+V A +S G +G G +DG IL+++
Sbjct: 147 ENRYTEKPARSFLMFVWEALHDITLIILMVCAVVSIGVGVATEGFPRGMYDGTGILLSIL 206
Query: 285 VLLTFPAVTNFRRA---RKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKG 341
+++ A+++++++ R L++ EK K+ V+V R G Q I++ +L+ GDVV L+ G
Sbjct: 207 LVVMVTAISDYKQSLQFRDLDR----EKKKIIVQVTRDGSRQEISIHDLVVGDVVHLSIG 262
Query: 342 DRVPGDGLVVNSDGLMLDD-VLNSEIDPD----RNPFLFSGSKVMEGHGTMLLISVGGNI 396
D+VP DG+ ++ L +D+ L+ E +P PFL SG+KV G ML+ +VG
Sbjct: 263 DQVPADGIFISGYNLEIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRT 322
Query: 397 ASGQVLRS-----------------------NLSLAVTVLIALVALIRLLWRKHSGDDHE 433
G+++ + + L+ VL +V IR + K +
Sbjct: 323 EWGKLMETLVDGGEDETPLQVKLNGVATIIGKIGLSFAVLTFVVLCIRFVLDKATSGSFT 382
Query: 434 LPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDK 493
N S + + + F + ++T++ +AV G+P +T+SL F K
Sbjct: 383 ------NWSSEDALTLLDYFAI-----------SVTIIVVAVPEGLPLAVTLSLAFAMKK 425
Query: 494 LLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASE---- 549
L+ + A ++L+A TMG ++ IC D TG L N + V+K I +K S+
Sbjct: 426 LM-SDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQERQEGSKESFE 484
Query: 550 ------INQAVLQALERGIGASVLV-----PEISLWPTTDWLVSWAKSRSLNVEFVDQNL 598
+ +LQ + + G+ V+ +I PT ++ + + +
Sbjct: 485 LELSEEVQSTLLQGIFQNTGSEVVKDKDGNTQILGSPTERAILEFGLLLGGDFNTQRKEH 544
Query: 599 SVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKG 658
+L+ +S+ K VL+ + GG G + +L MC DS G+S +
Sbjct: 545 KILKIEPFNSDKKKMSVLIALPGGGA----RAFCKGASEIVLKMCENVVDSNGESVPLTE 600
Query: 659 EK-RRFQKLIKDMEDSGLRPIAFA---CGQTEVSEIKENGLHLLALAGLREE----IKST 710
E+ +I+ LR + + E+ + G ++A+ G+++ ++
Sbjct: 601 ERITSISDIIEGFASEALRTLCLVYKDLDEAPSGELPDGGYTMVAVVGIKDPVRPGVREA 660
Query: 711 VEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDS 770
V+ + AG+ + +V+ D + +A E G + +A+EG +FR+L+ E A +
Sbjct: 661 VQTCQAAGITVRMVTGDNISTAKAIAKECGIY--TEGGLAIEGSEFRDLSPHEMRAIIPK 718
Query: 771 MTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAREC 830
+ +M L DK LV ++++ G VVA G T D PAL EAD+G+ TE+A+E
Sbjct: 719 IQVMARSLPLDKHTLVSNLRKIGEVVA-VTGDGTNDAPALHEADIGLAMGIAGTEVAKEN 777
Query: 831 SDIVI--SAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSI 888
+D++I +++ + + GR Y NIQKF + QLT L+I V+ I +P+T++
Sbjct: 778 ADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAV 837
Query: 889 QLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLI 948
QL+WV IM LG L + E ++ + P RT S + K MW++ A Q + Q+ V I
Sbjct: 838 QLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMWRNIAGQSVYQLIVLGI 897
Query: 949 FQFAGQVIPGMN----RDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMV 1004
FAG+ + ++ + + FNSF CQVFN+ ++ + K V + + V
Sbjct: 898 LNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQVFNEINSREIEKINVFKGMFNSWVFTWV 957
Query: 1005 FLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVL 1042
+ + QV++VEF + A L+ W + ++ L
Sbjct: 958 MTVTVVFQVIIVEFLGAFASTVPLSWQHWLLSILIGSL 995
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 321 bits (822), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 250/924 (27%), Positives = 432/924 (46%), Gaps = 100/924 (10%)
Query: 179 DLLDRIVKARNLNLLKEIGGPEKVASAFGSHLEHGIQGDQLPQPQ-IW--NTIKPNHARE 235
D L I + LK GG + ++ S +HGI L Q I+ N +R
Sbjct: 81 DELALITSKHDSKALKMHGGVDGISKKVRSSFDHGICASDLDTRQNIYGVNRYAEKPSRS 140
Query: 236 FFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNF 295
F++F+ A + +++L+V A LS G +G G +DG I++++F+++ AV+++
Sbjct: 141 FWMFVWDAFQDMTLIILMVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDY 200
Query: 296 RRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDG 355
+++ + ++ EK K+ + V R GR Q I++ +L+ GD+V L+ GD+VP DGL ++
Sbjct: 201 KQSLQFKELD-NEKKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYS 259
Query: 356 LMLDDV-LNSEIDP----DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRS------ 404
L++D+ L+ E DP PF+ +G+KV +G M++ +VG G+++ +
Sbjct: 260 LLIDESSLSGESDPVYVSQDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGE 319
Query: 405 -----------------NLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVM 447
+ L +L LV L+R L K G +
Sbjct: 320 DETPLQVKLNGVATVIGKIGLVFAILTFLVLLVRFLIDK-----------------GMTV 362
Query: 448 KIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSA 507
+ + + ++ +A+T++ +AV G+P +T+SL F KL+ N A ++LSA
Sbjct: 363 GLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLM-NDKALVRHLSA 421
Query: 508 GATMGIASVICIDVTGGLVCNRVDVSKFCIGE--KDV-NNDVASEINQAV--------LQ 556
TMG A IC D TG L N + V K I E K V +N ++ E+N V LQ
Sbjct: 422 CETMGSAGTICTDKTGTLTTNYMVVDKIWISEVSKSVTSNTISGELNSVVSSRTLSLLLQ 481
Query: 557 ALERGIGASVLVPE-----ISLWPTTDWLVSWAKSRSLNVEFV-DQNLSVLEHRKLSSNN 610
+ A V+ + + PT ++ + L +E V D S K+ N
Sbjct: 482 GIFENTSAEVVKEKDGKQTVLGTPTERAILEFG----LGLEGVHDAEYSACTKVKVEPFN 537
Query: 611 KV---CGVLVKINGGDEDKIMHMHW--SGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQ 664
V VL+ + G W G + IL MC D +G + + + +++
Sbjct: 538 SVKKKMAVLISLPSGTS------RWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNIL 591
Query: 665 KLIKDMEDSGLRPIAFACGQTEVSEIK-----ENGLHLLALAGLREEI----KSTVEALR 715
I LR + A + + +G L+A+ G+++ + K V+
Sbjct: 592 DTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKDPVRPGVKDAVKTCM 651
Query: 716 NAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 775
+AG+ + +V+ D + +A E G + +A+EG +F + E + ++ +M
Sbjct: 652 SAGITVRMVTGDNINTAKAIAKECGILTEDG--VAIEGPEFHSKSPEEMRDLIPNIQVMA 709
Query: 776 SCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI 835
L DK LV +++ V G T D PAL EAD+G+ TE+A+E +D+++
Sbjct: 710 RSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIV 769
Query: 836 --SAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWV 893
+++ + + GR Y NIQKF + QLT L+I V+ I +P+T++QL+WV
Sbjct: 770 LDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWV 829
Query: 894 YSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAG 953
IM LG L + E + E + PP R+ +S + KVMW++ Q L Q+ V F G
Sbjct: 830 NMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLYQLFVLGALMFGG 889
Query: 954 QVIPGM----NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVI 1009
+ + + ++ I + FNSF CQVFN+ ++ + K V ++ + + V +
Sbjct: 890 ESLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAATV 949
Query: 1010 AAQVLVVEFATSLAGYQRLNGMQW 1033
A QV+++EF + A LN W
Sbjct: 950 AFQVVIIEFLGTFASTVPLNWQHW 973
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 319 bits (817), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 249/929 (26%), Positives = 437/929 (47%), Gaps = 94/929 (10%)
Query: 171 KSEDRILPDLLDRIVKARNLNLLKEIGGPEKVASAFGSHLEHGIQGDQLPQPQ-IW--NT 227
K+ I PD L I + LK GG + ++ S +HGI +L Q I+ N
Sbjct: 95 KAGYAINPDELALITSKHDSKALKMHGGVDGISIKVRSSFDHGIYASELDTRQNIYGVNR 154
Query: 228 IKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLL 287
+R F++F+ A + +++L+V A LS G +G G +DG I++++F+++
Sbjct: 155 YAEKPSRSFWMFVWDALQDMTLIILMVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVV 214
Query: 288 TFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGD 347
AV++++++ + ++ EK K+ + V R GR Q I++ +L+ GD+V L+ GD+VP D
Sbjct: 215 MVTAVSDYKQSLQFKELD-NEKKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPAD 273
Query: 348 GLVVNSDGLMLDDV-LNSEIDP----DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVL 402
GL ++ L++D+ L+ E DP PF+ +G+KV +G M++ +VG G+++
Sbjct: 274 GLYIHGYSLLIDESSLSGESDPVYVSQDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLM 333
Query: 403 RS-----------------------NLSLAVTVLIALVALIRLLWRKHSGDDHELPELKG 439
+ + L +L LV L+R L K
Sbjct: 334 STLSEGGEDETPLQVKLNGVATIIGKIGLVFAILTFLVLLVRFLIDK------------- 380
Query: 440 NVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHH 499
G + + + + ++ +A+T++ +AV G+P +T+SL F KL+ N
Sbjct: 381 ----GMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLM-NDK 435
Query: 500 AKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGE--KDV-NNDVASEINQAVL- 555
A ++LSA TMG A IC D TG L N + V K I E K V +N ++ E+N V
Sbjct: 436 ALVRHLSACETMGSAGTICTDKTGTLTTNHMVVDKIWISEVSKSVTSNTISGELNSVVSS 495
Query: 556 -------QALERGIGASVLVPE-----ISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEH 603
Q + A V+ + + PT ++ + + + + + ++
Sbjct: 496 STLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGLKGDHDAEYRACTKVKV 555
Query: 604 RKLSSNNKVCGVLVKINGGDEDKIMHMHW--SGTASTILNMCSYYYDSEGKSFEI-KGEK 660
+S K VL+ + G W G + IL MC D +G + + + ++
Sbjct: 556 EPFNSVKKKMAVLISLPNGTS------RWFCKGASEIILQMCDMMVDGDGNAIPLSEAQR 609
Query: 661 RRFQKLIKDMEDSGLRPIAFACGQTEVSEIK-----ENGLHLLALAGLREEI----KSTV 711
+ I LR + A + + +G L+A+ G+++ + K V
Sbjct: 610 KNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKDPVRPGVKDAV 669
Query: 712 EALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLD-S 770
+ +AG+ + +V+ D + +A E G + +A+EG +F STE M L +
Sbjct: 670 KTCMSAGITVRMVTGDNINTAKAIAKECGILTEDG--VAIEGPEFHS-KSTEEMRDLILN 726
Query: 771 MTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAREC 830
+ +M L DK LV +++ V G T D PAL EAD+G+ TE+A+E
Sbjct: 727 IQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKES 786
Query: 831 SDIVI--SAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSI 888
+D+++ +++ + + GR Y NIQKF + QLT L+I V+ I+ +P+T++
Sbjct: 787 ADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIGSAPLTAV 846
Query: 889 QLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLI 948
QL+WV IM LG L + E + E + PP R+ +S + K MW++ Q L Q+ V
Sbjct: 847 QLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKFMWRNIMGQSLYQLFVLGA 906
Query: 949 FQFAGQVIPGM----NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMV 1004
F G+ + + ++ I + FNSF CQVFN+ ++ + K V ++ + + V
Sbjct: 907 LMFGGERLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAV 966
Query: 1005 FLIVIAAQVLVVEFATSLAGYQRLNGMQW 1033
+A QV+++EF + A LN W
Sbjct: 967 IAATVAFQVVIIEFLGTFASTVPLNWQHW 995
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q65X71|ACA6_ORYSJ Probable calcium-transporting ATPase 6, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os05g0495600 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 312 bits (799), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 260/948 (27%), Positives = 453/948 (47%), Gaps = 105/948 (11%)
Query: 162 IPSEIVEEEKSEDRILPDLLDRIVKAR-NLNLLKEIGGPEKVASAFGSHLEHGIQGDQLP 220
+P E++EE I PD L I R + +L+ GG ++ + LE G + +
Sbjct: 73 LPPELIEEGFC---ISPDELAAIANMREDYTMLRMHGGINGISRKIKASLEDGAKETDIA 129
Query: 221 QPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGA 277
Q+ N R F++F+ A ++ +++L+V A +S V G +G G +DG
Sbjct: 130 TRQMLYGANRHAEKPPRSFWMFVWDALHDLTLIILVVCALVSIVVGLATKGWPMGIYDGF 189
Query: 278 AILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVR 337
I++++ +++ A +++++ARK + EK K+ ++V R + + + V +L+ GD++
Sbjct: 190 GIILSILLVVLVTATSDYQQARKFMELD-REKQKIYIRVTRDKKTKEVLVHDLVVGDILH 248
Query: 338 LAKGDRVPGDGLVVNSDGLMLDD-VLNSEIDP----DRNPFLFSGSKVMEGHGTMLLISV 392
L+ GD VP DGL ++ D LM+D+ L+ E +P + PFL +G+KV++G ML+ +V
Sbjct: 249 LSIGDVVPADGLFISGDCLMIDESSLSGESEPVNISEERPFLHAGNKVVDGAAKMLVTAV 308
Query: 393 GGNIASGQVLRS-----------------------NLSLAVTVLIALVALIRLLWRK--H 427
G G+++ + + L VL LV L R L K H
Sbjct: 309 GTRTEWGKIMGTLNGDGVDETPLQVKLNGVATIIGQIGLVFAVLTFLVLLARFLADKGMH 368
Query: 428 SGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSL 487
G N S + I F + A+T++ +AV G+P +T+SL
Sbjct: 369 VG--------LLNWSANDALTIVNYFAI-----------AVTIIVVAVPEGLPLAVTLSL 409
Query: 488 FFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGE-----KDV 542
F KL+ + A ++L+A TMG AS IC D TG L N + V K IG+
Sbjct: 410 AFAMKKLM-HDKALVRHLAACETMGSASCICTDKTGTLTTNHMIVDKVWIGDVKFVGDKK 468
Query: 543 NNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLE 602
N+++ S I++ V+ L +GI + + + ++ A +L +EF LS+ E
Sbjct: 469 NSELKSTISERVMAILIQGIFVNTASEVVKGDDGKNTILGLATETAL-LEF---GLSLEE 524
Query: 603 H-----RKLS--------SNNKVCGVLVKI-NGGDEDKIMHMHWSGTASTILNMCSYYYD 648
H KL+ S K V +++ NGG + G + IL C+ ++
Sbjct: 525 HLYDDYNKLTRIKVDPFNSVKKKMSVTIQLPNGG-----IRTFCKGASEIILEQCNTIHN 579
Query: 649 SEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEV----SEIKENGLHLLALAGL 703
++G + + +K +I LR + A + I ++G L+A+ G+
Sbjct: 580 TDGNIVPLSEMQKHNVLNIINSFASEALRTLCIAFKDMDEFPNDQPISDDGYTLIAVFGI 639
Query: 704 REEIKSTV-EALRN---AGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFREL 759
++ ++ V +A+R AG+R+ +V+ D + +A E G + IA+EG+Q
Sbjct: 640 KDPVRPGVKDAVRTCMAAGIRVRMVTGDNINTAKAIAKECGILTEDG--IAIEGQQLNNK 697
Query: 760 NSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITE 819
+S E L + ++ L DK LV S+K V G T D PAL E+D+G+
Sbjct: 698 SSDELKELLPKIQVIARSLPMDKYKLVTSLKSMYQEVVAVTGDGTNDAPALHESDIGLAM 757
Query: 820 ENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTT 877
TE+A+E +D++I +++ + + GR Y NIQKF + QLT L++ V+
Sbjct: 758 GITGTEVAKESADVIIMDDNFETIVNVARWGRAVYLNIQKFVQFQLTVNIVALIVNFVSA 817
Query: 878 LILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAV 937
I+ +P+T++QL+WV IM LG L + E + E + PP RR + + ++MW++
Sbjct: 818 CIIGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRRGDNFITRIMWRNILG 877
Query: 938 QVLCQVGVFLIFQFAGQVI-----PGMNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVL 992
Q L Q+ V G+ + P ++ I + FNSF CQVFN+ + + K VL
Sbjct: 878 QGLYQLLVLATLMVIGKKLLSIEGPQSDKTI-NTLIFNSFVFCQVFNEINCREMEKINVL 936
Query: 993 PVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILA 1040
+ + + + + + QV++VEF + A L+G W + ++
Sbjct: 937 QGIFRNWIFVGILTATVIFQVIIVEFLGTFANTVPLSGELWLLSVVIG 984
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1108 | ||||||
| 255581776 | 1042 | cation-transporting atpase plant, putati | 0.870 | 0.926 | 0.484 | 0.0 | |
| 225447582 | 1063 | PREDICTED: putative calcium-transporting | 0.800 | 0.834 | 0.387 | 1e-174 | |
| 357495317 | 1052 | Calcium-transporting ATPase [Medicago tr | 0.885 | 0.932 | 0.358 | 1e-169 | |
| 225451324 | 1057 | PREDICTED: calcium-transporting ATPase 1 | 0.767 | 0.804 | 0.351 | 1e-144 | |
| 225437164 | 1081 | PREDICTED: calcium-transporting ATPase 1 | 0.790 | 0.810 | 0.338 | 1e-141 | |
| 147790888 | 1007 | hypothetical protein VITISV_002789 [Viti | 0.796 | 0.876 | 0.340 | 1e-141 | |
| 356573611 | 1029 | PREDICTED: putative calcium-transporting | 0.780 | 0.840 | 0.349 | 1e-141 | |
| 225451326 | 1007 | PREDICTED: calcium-transporting ATPase 1 | 0.796 | 0.876 | 0.340 | 1e-141 | |
| 357468545 | 978 | Plasma membrane calcium-transporting ATP | 0.747 | 0.846 | 0.359 | 1e-139 | |
| 225432838 | 1012 | PREDICTED: putative calcium-transporting | 0.822 | 0.900 | 0.338 | 1e-139 |
| >gi|255581776|ref|XP_002531689.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223528665|gb|EEF30680.1| cation-transporting atpase plant, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/1001 (48%), Positives = 655/1001 (65%), Gaps = 36/1001 (3%)
Query: 133 TTSYAPVPTSSVEQGLCRNLSTQSRHAIDIPSEIVEEEKSEDRILPDLLDRIVKARNLNL 192
++ Y P+P SS + L R ST+S ++I+I S+ E D L + +I+K R+L+L
Sbjct: 52 SSPYVPLPVSSDQ--LPRTCSTRSWYSIEIHSD---HEIEVDEQLQKSVIQIIKERDLDL 106
Query: 193 LKEIGGPEKVASAFGSHLEHGIQGDQLPQPQIWNTIKPNHAREFFLFLLKASNNFNILLL 252
LK GG +KVAS GS LE GI DQ Q I N P A F +L+ N+ I LL
Sbjct: 107 LKRFGGVQKVASVLGSDLETGINEDQGLQSLISN---PVCANGFNSNVLQVCNSSTIFLL 163
Query: 253 LVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKL 312
L++A LSF +EQG + GWHDG AIL+AVFVL++F ++ NF R+LEK+Q E+KNKL
Sbjct: 164 LISAGLSFAIEIMEQGAQYGWHDGVAILVAVFVLVSFRSIANFHHQRQLEKQQLEKKNKL 223
Query: 313 EVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDVLNSEIDPDRNP 372
EVKVVR+GR++LIAV+NL++GD+VRL KGDRVP DGL VN D L+LD+VLNS+ID +P
Sbjct: 224 EVKVVRNGRDKLIAVANLVEGDLVRLEKGDRVPADGLYVNGDTLVLDEVLNSKIDYHESP 283
Query: 373 FLFSGSKVMEGHGTMLLISVGGNIASG----------QVLRSN-----LSLAVTVLIALV 417
FL SGSKV+EGHG ML+I V N AS Q+ + N L L++++LIA +
Sbjct: 284 FLSSGSKVVEGHGHMLVILVDANKASDDPNKRTFLETQIEKPNSYADKLVLSISLLIAFI 343
Query: 418 ALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQH 477
L+ L++++ +D LPELKGN + +++IFE +P+G+I +L LT +AI +QH
Sbjct: 344 VLMGLVFKRQRRNDDILPELKGNTKIDVLIEIFESMFWRPRGRICVLTGVLTAIAIGMQH 403
Query: 478 GMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCI 537
GM F IT SL +WN KL ++ KPQ LSA TMG+ +VICID +GGL+CN+++V++F I
Sbjct: 404 GMSFAITASLSYWNGKLELSG-VKPQTLSACGTMGLVTVICIDASGGLICNQMEVNEFFI 462
Query: 538 GEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSR-SLNVEFVDQ 596
GE+++N+D E + VL+AL +GIGAS LV S+ P D L +WAKSR N+E DQ
Sbjct: 463 GEENMNDDEVCETSPVVLEALGQGIGASTLVTGGSVRPIDDLLAAWAKSRWGANMELSDQ 522
Query: 597 NLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEI 656
SVL+H L SN V++K NG DE I+H+H G ASTILN CS+YY+++ + I
Sbjct: 523 CFSVLDHGILESNKNCSRVVIKKNGDDEG-ILHLHLKGDASTILNFCSHYYNTKWEVHAI 581
Query: 657 KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALRN 716
K ++R F+++I++ME GL IA+AC Q E ++ + LHLLAL GL+ + VEAL N
Sbjct: 582 KDQRRDFEQVIENMESRGLTAIAYACKQMETTKSRAEHLHLLALVGLKCSFQEIVEALTN 641
Query: 717 AGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS 776
AGV I LVS+DEL AV ++A LG P S+ I LEG Q R+L T R+ K++ ++MGS
Sbjct: 642 AGVSIKLVSQDELSAVRDIAHLLGINPPPSDGIELEGAQIRDLADTGRIGKIEEASVMGS 701
Query: 777 CLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 836
CL++DKLL+V S+K+ GHVVAF GG ST D PALKEAD+ IT+EN+ TEMAR+CSDIV+S
Sbjct: 702 CLSEDKLLIVNSLKQNGHVVAFVGGLSTNDAPALKEADLAITKENQSTEMARKCSDIVLS 761
Query: 837 ---AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWV 893
++ SL +LK GRCAY NIQ FT+LQLT C SGLLI LV + L +SP+ +IQLIW+
Sbjct: 762 NECSLRSLPEVLKYGRCAYNNIQNFTQLQLTACISGLLINLVAAICLWDSPLPAIQLIWM 821
Query: 894 YSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAG 953
I+ +LG +M ME + QE + NPPA R + LL K +WK A Q L Q + G
Sbjct: 822 NFILCVLGYPMMVMELRSQELIANPPANRAEPLLTKAIWKTIATQALSQFALLTTLHLVG 881
Query: 954 QVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQV 1013
QVIP +N K++ FNSF LCQVFNQF AM + K V VL + L+ V QV
Sbjct: 882 QVIPSINEHTWKSLVFNSFMLCQVFNQFKAMGIRSKEVAEAVLHHYWFLLALGTVTVMQV 941
Query: 1014 LVVEFATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIA---DSFLDRSLSGILRLEF 1070
L+ EF TSL ++RLN +QW F +A+L WG+ AV I+ + RS G
Sbjct: 942 LITEFGTSLTRFKRLNLVQWVTSFSIALLSWGLGNAVELISVLFSKWFSRS-CGSNHAGS 1000
Query: 1071 SRRQQHRPY---VSFLSIPFSMFLYISISHYYNPDNSFTFR 1108
S R++ RP VS L PFS++ S+ +Y+ PDNS FR
Sbjct: 1001 SSRRRRRPLSFVVSLLGSPFSIYFLFSLPYYFYPDNSQAFR 1041
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225447582|ref|XP_002270457.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 375/967 (38%), Positives = 571/967 (59%), Gaps = 80/967 (8%)
Query: 164 SEIVEEEKSEDR-----ILPDLLDRIVKARNLNLLKEIGGPEKVASAFGSHLEHGIQGDQ 218
+++VEE+ ED + P + I++ ++L L+E+GG EKVAS GS + G +
Sbjct: 87 ADVVEEKVMEDGNHLAGLNPKAVAEIMEKKDLKRLQELGGAEKVASILGSDVGVGKVAEG 146
Query: 219 LPQPQIWNTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAA 278
+ TI E F+LKA + +LL A + G +E G K GWH G A
Sbjct: 147 QQSANLDTTIT---VYEIHHFILKACRKTDKILLFFQAVFTLACGMVEGGLKTGWHIGVA 203
Query: 279 ILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRL 338
IL+ F+ + +P+V++F RK+EK+ ++N++EV+VVRSG+ Q+I + ++++GD+VRL
Sbjct: 204 ILVIWFIRVAYPSVSSFFGVRKMEKRL-NKRNRVEVEVVRSGKSQIIRLCDIVEGDIVRL 262
Query: 339 AKGDRVPGDGLVVNSDGLMLDDVLNSEIDPDRNPFLFSGSKVMEGHGTMLLISVGGNIAS 398
++G+ +P DGL+V+ + +++D L+ EI + NPFL+ GSKV+EGHG ML+ SVG N+
Sbjct: 263 SEGNLIPADGLLVSGNRMVVDGALHKEISCNGNPFLYYGSKVVEGHGRMLVTSVGTNMEL 322
Query: 399 GQVLRS---------------------------------------------NLSLAVTVL 413
+++ S N +L + +
Sbjct: 323 SKLMSSVTNYQDKELLFKARLKKPSPYADIDDQNKEALLEDRIGKPLGWLGNFALLMPIF 382
Query: 414 IALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAI 473
+V I + K+ + + LKG + V +K+ ++ L K GK+++L + + +
Sbjct: 383 CVVVKFILFFFWKNK-KSNVVQTLKGAIGVEWAIKLLKQILDKG-GKMNLLAAIIPTLVF 440
Query: 474 AVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVS 533
+QHG+ VI++ L +WN + + PQNLSA TMGI +VICID +GGL+ ++D+S
Sbjct: 441 GLQHGVKIVISICLNYWN-VIRGSSEVTPQNLSAPGTMGIVTVICIDASGGLLYEKMDIS 499
Query: 534 KFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAK-SRSLNVE 592
+F +G++ +++ SE++ AVL+AL G+GAS LVPEI PT D L+SWA+ +N+E
Sbjct: 500 RFWMGQEAIDDQSHSEVSPAVLEALSSGVGASALVPEIHSIPTDDVLISWAELVWGMNIE 559
Query: 593 FVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGK 652
F+ Q +++ + KLSS + GV+++ NG DE+ IMH+HW G A TIL+MCS+Y G+
Sbjct: 560 FLKQRFTIINYGKLSSTKEGRGVVLRKNGSDEN-IMHLHWKGDAKTILDMCSHYSKCRGE 618
Query: 653 SFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLR----EEIK 708
I+ +K F+K+IK+M+D L+PIAFA QT+V +++E+GL LLAL G++ EE+K
Sbjct: 619 IHGIEDQKSEFEKVIKEMQDDSLQPIAFAYKQTDVEQLEEDGLILLALVGVKYQFQEEMK 678
Query: 709 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 768
S V+ ++AG+RI LVSE+EL +ACELG F P S + LEG++FREL R ++
Sbjct: 679 SVVKNFQSAGIRIKLVSENELSTSRAMACELGIFTPGSINGILEGQEFRELTYDARKERV 738
Query: 769 DSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAR 828
D +T+MGS L +DKLL+V+S+KEKG VVA+ GG + RD P LKEAD+GIT TEM
Sbjct: 739 DQVTVMGSSLPEDKLLMVKSLKEKGDVVAYIGGWTGRDAPVLKEADIGITVGTWSTEMTN 798
Query: 829 ECSDIVIS---AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPI 885
E SDIV++ + SL+P+L+ GR Y I KF ++QL S LLIT V T+ L +S I
Sbjct: 799 EISDIVLASDKSFSSLIPVLEYGRHDYHKIGKFIEIQLISNISVLLITAVETICLGDSSI 858
Query: 886 TSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGV 945
T +Q ++V I+ +LGGL++ M+ + +E N P +R S++ K MW + ++QV Q V
Sbjct: 859 TIVQFLYVNLILGLLGGLLLGMKPQCKELRNNQPDKRNASIITKEMWINISLQVSYQAIV 918
Query: 946 FLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVF 1005
L+FQF G I G N RKAM FN F LCQVFN L K P +
Sbjct: 919 LLVFQFKGTAIHGTNPMDRKAMVFNGFILCQVFNYVHP--LFKAGKYP----------FW 966
Query: 1006 LIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSFLDRSLSGI 1065
L ++ VL V T L G L+ +QW CF++A WG++ A I+ + S +
Sbjct: 967 LFLVPFTVLHVVVVTELWG--ELSRVQWAFCFLIAAFAWGVNLAAVLISILIKWQFGSAV 1024
Query: 1066 LRLEFSR 1072
L FSR
Sbjct: 1025 LPNGFSR 1031
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357495317|ref|XP_003617947.1| Calcium-transporting ATPase [Medicago truncatula] gi|355519282|gb|AET00906.1| Calcium-transporting ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 408/1139 (35%), Positives = 605/1139 (53%), Gaps = 158/1139 (13%)
Query: 8 NQSCDSNGN--ALGAGLLVTASATTTATTTSSTSPSHKYARLWRRSITVGIIVSLKKTTC 65
+ S +S+G LGA LL+T + TTT +++ KY + WR+S+ +G ++SLKK
Sbjct: 5 SMSLESDGANIELGASLLITTTTTTTTSSS-------KYNKKWRKSLYIGFLISLKK--- 54
Query: 66 FPGQDLLPSPTSSSPLLVNQENDSDSLQQEPSNTDSAVPENGFINVVSKACNSFSRRSFK 125
PT+S+ EN +
Sbjct: 55 ---------PTTST-------------------------EN------------YQESPPP 68
Query: 126 DQGASSSTTSYAPVPTSSVEQGLCRNLSTQSRHAIDIPSEIVEEEKSEDRILPDLLDRIV 185
+S TS P P + R S +S IDIPS E + +E IV
Sbjct: 69 SPISSVPYTSLPPTPPA-------RTSSAKSSVGIDIPSHTQEGDIAE----------IV 111
Query: 186 KARNLNLLKEIGGPEKVASAFGSHLEH---------GIQGDQLPQPQIWNTIKPNHAREF 236
K ++L L E+GG V +H G+ + +WN+ K
Sbjct: 112 KKKDLKSLLELGGIGIVCDFLHGQSQHSSKKITRNLGVSFSGI----LWNSCK------- 160
Query: 237 FLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFR 296
N + I +LL++A LSF T ++GPK GWHDG A++ A+ +L+ F ++TNF
Sbjct: 161 -------HNLYTISMLLISAFLSFATEFKQEGPKYGWHDGVAMVFALLLLIAFSSITNFC 213
Query: 297 RARKL-----EKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVV 351
R RK+ +K QW K VK + + + VS+++ GD+V L+ D VP DGL+V
Sbjct: 214 RERKMMKLAKKKGQW----KFNVKRREASKPVPLTVSDIVVGDMVYLSPHDEVPADGLLV 269
Query: 352 NSDGLML---DDVLNSEIDPDRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRS---- 404
+ D +L + + N +ID + NPFL +GSKV+EGHG M++ SV N S ++ S
Sbjct: 270 SGDTDILVLSEGMKNEKIDCEENPFLIAGSKVIEGHGCMIVTSVPNNSNSTEMKGSMGYH 329
Query: 405 -------------------NLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGN-VSVG 444
SL V L+ALV IRL+ +K D LP++KGN VSVG
Sbjct: 330 PKKRALLESLIEKPISYLDKASLFVFTLVALVLFIRLICKKDV-DGGGLPDIKGNNVSVG 388
Query: 445 TVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQN 504
+ ++ E +P+G+ISIL +VV + VQHG+P ++T+SL + NDK++++ A +
Sbjct: 389 LLTQLLENIFSRPRGRISILAGLFSVVILCVQHGVPIMVTLSLHYQNDKVVLDQEAVLND 448
Query: 505 LSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEK--DVNNDVASEINQAVLQALERGI 562
LS TMG+ +VICIDV+G ++ ++V+K IGE D+N SE VL L++G+
Sbjct: 449 LSTCTTMGLVTVICIDVSGEIISKPMEVNKIWIGEAETDINKVEESETCPVVLDKLKQGV 508
Query: 563 GASVLVPEISLWPTTDWLVSWA-KSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKING 621
SVL +S P ++ VS A K+ +++E +N +LEH KL SN + GVLV+ N
Sbjct: 509 ALSVLASRLSPSPMSNSFVSLAEKTWEMDIESFRENFHILEHGKLDSNQEGGGVLVR-NV 567
Query: 622 GDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFA 681
D +++MH+HWSG ASTIL MCS YYD +GK ++ +K ++ ++I+DMED+GL+PIA A
Sbjct: 568 RDNEQVMHLHWSGAASTILEMCSQYYDRQGKCHSMENQKIKYGQVIQDMEDNGLKPIALA 627
Query: 682 CGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVAC 737
QT+V E+K++ L LLAL GL RE K ++ L+N G+ I LVS D+++ V E AC
Sbjct: 628 YRQTQVQELKQDELTLLALVGLKYKCRESTKKALKNLQNDGIHIKLVSTDDIMVVKETAC 687
Query: 738 ELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVA 797
ELG P D LEG++ + LN R+ KL MGS +DKLL+V+ +++KG VVA
Sbjct: 688 ELGIEVPV--DGHLEGKELQYLNGKARLVKLGKAIAMGSFSPEDKLLMVRCLQDKGDVVA 745
Query: 798 FFGGS---STRDTPALKEADVGITEENKCTEM--ARECSDIVISAVGSLLPILKLGRCAY 852
F + + LK AD GI N +++ +RE S + I+ +L PI+K GR Y
Sbjct: 746 FIETQQLMTNHTSEVLKIADAGIVH-NSLSKLIGSREGSGLSITCFSALKPIVKAGRSEY 804
Query: 853 CNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQ 912
NIQKF +LQLT SGLLITL+TT+ SP+T IQLIWV ++M +LGGL+M ME +
Sbjct: 805 HNIQKFIQLQLTVGISGLLITLITTIFTGNSPLTEIQLIWVNALMCLLGGLMMVMELSSE 864
Query: 913 EPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSF 972
E + P R + ++ K +WK+ QVL Q +I +F G V + +RK M FN+F
Sbjct: 865 EELVKQPYDRNQLIITKKIWKNIVFQVLYQASACIILEFGGHV-TDREKQVRKTMIFNTF 923
Query: 973 TLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQ 1032
LCQ+FN + M LK V + ++K + QV+V+E+A LA RLN +
Sbjct: 924 FLCQLFNLLNTMGFLKAEVFKIDVQKHCFSVALGSCFVMQVVVIEYAKGLAYCMRLNATR 983
Query: 1033 WGICFILAVLPWGIHRAVNFIADSFLDRSLSGILRLEFSRRQQHRPYVSFLSIPFSMFL 1091
W IC ++ W + +N I F + + L S Q + + +PF M L
Sbjct: 984 WAICVMVGAFSWVLEWILNKILSVFFSNTDTSPLDPPESTPQPL--FYFYCGLPFMMLL 1040
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451324|ref|XP_002273945.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 326/928 (35%), Positives = 506/928 (54%), Gaps = 78/928 (8%)
Query: 180 LLDRIVKARNLNLLKEIGGPEKVASAFGSHLEHGIQGDQLPQPQIWNTIKPNHARE---- 235
+L V+ ++ L + GG +++ + + + GI G + + N R
Sbjct: 122 MLTETVRDKDFERLHQFGGIKQLVAVLKTDEKDGIDGHEADLKHRRDVFGSNQYRRPPKK 181
Query: 236 -FFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTN 294
FF F+++A + I++L+V A LS G ++G K+GW+DG +I+IA+F+++ +V+N
Sbjct: 182 SFFSFVVEAFKDTIIIILMVCAILSLGFGIKQEGIKEGWYDGGSIVIAIFLVVIVSSVSN 241
Query: 295 FRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSD 354
FR++R+ +K E + ++V+VVR GR Q +++ L+ GD+V L GD+VP DGL +
Sbjct: 242 FRQSRQFQKLS-SETSDIKVQVVRQGRRQPVSIFQLVVGDIVCLNIGDQVPADGLFMEGH 300
Query: 355 GLMLDDVLNS------EIDPDRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRS---- 404
L +D+ + EI+ NPFLFSG+KV +G GTML+ SVG N A G+++ S
Sbjct: 301 SLKVDESSMTGESDHVEINDKDNPFLFSGTKVSDGFGTMLVTSVGMNTAWGEMMSSIRRE 360
Query: 405 -------------------NLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGN-VSVG 444
L LAV LI LV LI + ++ D++ + E G+ ++
Sbjct: 361 LDEQTPLQARLDKLASTIGKLGLAVA-LIVLVVLIIRYFTGNTEDENGMQEFNGSKTNIN 419
Query: 445 TVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQN 504
VM + I+ +A+T+V +A+ G+P +T+SL + + K ++ A +
Sbjct: 420 DVM----------DAVVHIISAAVTIVVVAIPEGLPLAVTLSLAY-SMKRMMADQAMVRK 468
Query: 505 LSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIG- 563
LSA TMG A+ IC D TG L N++ V +F +G + + +D EI +VLQ L++G+G
Sbjct: 469 LSACETMGSATTICTDKTGTLTLNKMKVVEFWLGNEVIEDDTYLEIAPSVLQLLKQGVGL 528
Query: 564 ---------ASVLVPEISLWPTTDWLVSWAK-SRSLNVEFVDQNLSVLEHRKLSSNNKVC 613
S VPEIS PT +++WA ++++ Q+ +L +S K
Sbjct: 529 NTTGSVCKLPSTSVPEISGSPTETAILTWAVVDLGMDIDEQKQSCEILHVEAFNSEKKRS 588
Query: 614 GVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKR-RFQKLIKDMED 672
GVLV+ D+ + HW G A IL CS+Y+D GK+ + +KR +F +I+DM
Sbjct: 589 GVLVRTI---TDQTIQTHWKGAAEMILATCSHYFDKGGKTKLMDDDKRMQFGGIIRDMAA 645
Query: 673 SGLRPIAFACGQT------EVSEIKENGLHLLALAGLREE----IKSTVEALRNAGVRII 722
LR IAFA Q +++E G+ LL L GL++ ++ VE R+AGV+I
Sbjct: 646 KSLRCIAFAYKQVLQENGQSHEKLEETGMTLLGLVGLKDPCRPGVRRAVEDCRDAGVKIK 705
Query: 723 LVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAD 780
+++ D + +A E G +P+ N+ +EG FR + ERM K+D + +M
Sbjct: 706 MITGDNIFTAKAIAMECGILKPDEDMNNAVVEGVTFRNFSDEERMEKIDMIRVMARSSPF 765
Query: 781 DKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAV 838
DKLL+VQS+K+KGHVVA G T D PALKEAD+G++ + TE+A+E SDIVI
Sbjct: 766 DKLLMVQSLKQKGHVVAV-TGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNF 824
Query: 839 GSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMY 898
S++ +L+ GRC Y NIQKF + QLT + L+I V + + P+T++QL+WV IM
Sbjct: 825 TSVVTVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSSGDVPLTAVQLLWVNLIMD 884
Query: 899 MLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPG 958
LG L + E + + P RTK L+ VMW++ Q L QV V LI QF G+ I
Sbjct: 885 TLGALALATERPTNDLLKKSPVGRTKPLISNVMWRNLIAQALYQVAVLLILQFKGKDIFN 944
Query: 959 MNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEF 1018
++ ++ + FN+F LCQVFN+F+A + KK V +LK L + I QV++VEF
Sbjct: 945 VDEKVKNTLIFNTFVLCQVFNEFNARHMEKKNVFKGILKNRLFLGIIGFTIVLQVVMVEF 1004
Query: 1019 ATSLAGYQRLNGMQWGICFILAVLPWGI 1046
A RLN QWG C +A L W I
Sbjct: 1005 LKRFADTVRLNWGQWGACIAIASLSWPI 1032
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225437164|ref|XP_002274787.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 327/967 (33%), Positives = 520/967 (53%), Gaps = 91/967 (9%)
Query: 161 DIPSEIVEEEKSEDRI----LPDL---LDRIVKARNLNLLKEIGGPEKVASAFGSHLEHG 213
D+P ++V + S D + LPD+ L +VK ++L L+ GG E VA+ +HG
Sbjct: 93 DLP-DLVPKPHSPDLVSNHALPDINTKLTEMVKEKDLIALRGFGGVEGVAATLLIDPQHG 151
Query: 214 IQGDQLPQPQIW-----NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQG 268
I G++ + NT + F F++ A + IL+LLV AALS G E G
Sbjct: 152 ILGNEDDVRRRRDKFGSNTYYKPPPKGLFYFVVDAFKDTTILILLVCAALSLGFGIKEHG 211
Query: 269 PKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVS 328
P++GW++G +I +AVF++++ A++NFR+ R+ +K + N +++ V R GR Q I++
Sbjct: 212 PQEGWYEGGSIFVAVFLVISVAALSNFRQERQFDKLS-KISNNIKIDVARDGRRQEISIF 270
Query: 329 NLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDVLNS------EIDPDRNPFLFSGSKVME 382
+++ GDVV L GD++P DGL + + +D+ + E+D +RNPFLFSGSKV +
Sbjct: 271 DIVVGDVVFLNIGDQIPADGLFLEGHSMEVDESSMTGESDHVEVDRERNPFLFSGSKVAD 330
Query: 383 GHGTMLLISVGGNIASGQVL---------RSNLSLAVTVLIALVALIRL----------- 422
G+ ML+ SVG N A G+++ R+ L + L + + + L
Sbjct: 331 GYARMLVTSVGMNTAWGEMMSSISRDTNERTPLQARLDKLTSSIGKVGLAVAFLVLVVLL 390
Query: 423 --LWRKHSGDDHELPELKG-NVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGM 479
+ H+ D++ E G + + V+ ++I+ +A+T++ +A+ G+
Sbjct: 391 IRYFTGHTKDENGQREYNGSDKDINDVL----------NSVVNIVAAAVTIIVVAIPEGL 440
Query: 480 PFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGE 539
P +T++L + +++ +H A + LSA TMG A++IC D TG L N++ V+KF +G+
Sbjct: 441 PLAVTLTLAYSMKRMMADH-AMVRKLSACETMGSATIICTDKTGTLTMNQMKVTKFWLGQ 499
Query: 540 KDVNNDVASEINQAVLQALERGIG----------ASVLVPEISLWPTTDWLVSWA-KSRS 588
+++ ++ I +L+ +G+G AS V E S PT ++SWA +
Sbjct: 500 EEMGEIPSNAITPCILELFRQGVGLNTTGSVYRPASGAVFEFSGSPTEKAILSWAVQELG 559
Query: 589 LNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYD 648
++VE + Q S+L +S K GV ++ N D +H+HW G A +L MCS YY+
Sbjct: 560 MDVEQLKQTYSILHVETFNSEKKRSGVSMRKNA---DNTIHVHWKGAAEMVLQMCSNYYE 616
Query: 649 SEGKSFEIKGEKR-RFQKLIKDMEDSGLRPIAFACGQTEVSEIK------------ENGL 695
+ G + + R + +K+I+ M S LR IAFA Q +EI+ ENGL
Sbjct: 617 TSGTIKSMDEDSRMQLEKIIQGMAASSLRCIAFAYKQISEAEIEYNDDGRAHQKLNENGL 676
Query: 696 HLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACE---LGNFRPESND 748
LL + GL++ +K VE ++AGV I +++ D + +A E LG+ E
Sbjct: 677 TLLGIVGLKDPCRPGVKRAVEICKSAGVEIKMITGDNVFTAKAIATECGILGSDDTEHKG 736
Query: 749 IALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTP 808
+EG +FR ERM K+D + +M DKLL+VQ +K+KG VVA G T D P
Sbjct: 737 AVVEGVEFRNYTHEERMQKIDKIRVMARSSPFDKLLMVQCLKQKGEVVAV-TGDGTNDAP 795
Query: 809 ALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQKFTKLQLTGC 866
ALKEAD+G++ + TE+A+E SDIVI S+ +L+ GRC Y NIQKF + QLT
Sbjct: 796 ALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVATVLRWGRCVYNNIQKFIQFQLTVN 855
Query: 867 ASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSL 926
+ L+I ++ + E P+T++QL+WV IM LG L + + E + PP RT+ L
Sbjct: 856 VAALVINFISAVSAGEVPLTAVQLLWVNLIMDTLGALALATDRPTNELMQRPPVGRTEPL 915
Query: 927 LDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMRL 986
+ VMW++ Q L Q+ V L QF G+ I ++ + + FN+F LCQVFN+F+A +L
Sbjct: 916 ITNVMWRNLLAQALYQIAVLLTLQFKGESIFNVDEKVNDTLIFNTFVLCQVFNEFNARKL 975
Query: 987 LKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVLPWGI 1046
K+ V + K L + I QV++VEF A LNG+QW IC +A + W I
Sbjct: 976 EKQNVFKGIHKNKLFLGIVGFTIVLQVVMVEFLKKFADTVNLNGLQWAICIAIAAVSWPI 1035
Query: 1047 HRAVNFI 1053
V FI
Sbjct: 1036 GWIVKFI 1042
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147790888|emb|CAN63793.1| hypothetical protein VITISV_002789 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 331/971 (34%), Positives = 526/971 (54%), Gaps = 88/971 (9%)
Query: 152 LSTQSRHAIDIPSEIVEEEKS------EDRILP------DLLDRIVKARNLNLLKEIGGP 199
LS++S +ID+ V E+ S ++R+L +L +V+ ++L L++ GG
Sbjct: 51 LSSRSYLSIDVQD--VHEDDSGHGRSGDERVLSFRNVGQRMLTEMVRDKDLERLRQFGGV 108
Query: 200 EKVASAFGSHLEHGIQGDQLPQPQIWNTIKPNH-----AREFFLFLLKASNNFNILLLLV 254
+++A+ G++ ++GI G + N N + F F+++AS + I++LL+
Sbjct: 109 KQLAALLGTNEKNGIDGHEADLIHRRNVFGSNEYTKPPKKGFLSFVVEASKDTTIIILLI 168
Query: 255 AAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEV 314
AALS G E+GP++GW+DG +I++A+ +++ +++NFR++ + K E + + V
Sbjct: 169 CAALSLGFGIKEEGPREGWYDGGSIIVAILLIVAVSSISNFRQSGQFHKFS-SESSDIRV 227
Query: 315 KVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDVLNS------EIDP 368
+VVR GR Q +++ L+ GD+V L GD+VP DGL + L +D+ + EI+
Sbjct: 228 QVVRQGRRQPVSIFQLVVGDIVFLNIGDQVPADGLFMEGHSLKVDESSMTGESDHVEINE 287
Query: 369 DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVL---RSNLS-----------LAVTV-- 412
NPF+FSG+KV +G GTML+ SVG N A G+++ R L LA T+
Sbjct: 288 KENPFMFSGTKVSDGFGTMLVTSVGMNTAWGEMMSSIRRELDEQTPLQARLDKLASTIGK 347
Query: 413 ---LIALVALIRLLWRKHSG---DDHELPELKGN-VSVGTVMKIFERFLLKPQGKISILV 465
+AL+ L+ L R +G DD E G+ + VM + ++
Sbjct: 348 LGLAVALIVLVVLFIRYFTGNIEDDSGNREFNGSKTKIDDVM----------NSVVHLVS 397
Query: 466 SALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGL 525
+A+T++ IA+ G+P +T++L + +++ + A + LSA TMG + IC D TG L
Sbjct: 398 AAVTILVIAIPEGLPMAVTLTLAYSMRRMMTDQ-ALVRKLSACETMGSVTTICTDKTGTL 456
Query: 526 VCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIG----------ASVLVPEISLWP 575
N++ V +F + + + ++ + VL+ L++G+G S VPEIS P
Sbjct: 457 TLNKMKVVEFWLESEVIKDETYRGVAPTVLELLKQGVGLNTTGSVCKLPSTSVPEISGSP 516
Query: 576 TTDWLVSWAKSRSLNVEFVDQNLS--VLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWS 633
T +++WA L ++ +Q LS +L +S K GVLV D +H+HW
Sbjct: 517 TESAILTWALV-DLGMDIDEQKLSFEILHVEAFNSQKKRSGVLVNRIA---DNTIHIHWK 572
Query: 634 GTASTILNMCSYYYDSEGKSFEIKGEKR-RFQKLIKDMEDSGLRPIAFACGQTEVSEIKE 692
G A IL MCS+YYD G + +KR +F LI+DM LR IAFA Q +++E
Sbjct: 573 GAAEMILAMCSHYYDKSGIVKVMDDKKRGQFGGLIRDMAAKSLRCIAFAYKQALQEKLEE 632
Query: 693 NGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES-- 746
G+ LL L GL++ ++ VE R+AGV + +++ D + +A E G +P+
Sbjct: 633 TGMILLGLVGLKDPCRPGVRRAVEVCRDAGVNVKMITGDNIFTAKAIAMECGILKPDEDF 692
Query: 747 NDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRD 806
N+ +EG FR + ERM K+D + +M DKLL+VQS+K+KGHVVA G T D
Sbjct: 693 NNAVVEGVTFRNYSHRERMDKIDIIRVMARSSPFDKLLMVQSLKKKGHVVAV-TGDGTND 751
Query: 807 TPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQKFTKLQLT 864
PALKEAD+G++ + TE+A+E SDIVI S++ ++K GRC Y N+QKF + QLT
Sbjct: 752 APALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVMKWGRCVYNNLQKFIQFQLT 811
Query: 865 GCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTK 924
+ L I V + + P+T++QL+WV I G L + E + + PP R+K
Sbjct: 812 INVAALGINFVAAVASGKVPLTAVQLLWVNLIQDTFGALALATEQPTNDLLMKPPVGRSK 871
Query: 925 SLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAM 984
L+ VMW++ Q L Q+ V LI Q+ G I G++ I + FN+F LCQVFN+F+A
Sbjct: 872 PLITNVMWRNLISQALYQISVLLILQYKGSSIFGVDEKINNTLIFNTFVLCQVFNEFNAR 931
Query: 985 RLLKKA--VLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVL 1042
+ KK +LK + + I IA QV++VEF A +RL+ QWG+C LA L
Sbjct: 932 NMDKKNKFFFKGILKNRLFVGIIGITIALQVVMVEFLKRFANTERLDWGQWGVCIGLAAL 991
Query: 1043 PWGIHRAVNFI 1053
W I V ++
Sbjct: 992 SWPIDWLVKYL 1002
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356573611|ref|XP_003554951.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 326/934 (34%), Positives = 502/934 (53%), Gaps = 69/934 (7%)
Query: 181 LDRIVKARNLNLLKEIGGPEKVASAFGSHLEHGIQG------DQLPQPQIW--NTIKPNH 232
L IVK + L L GG E VA A +H+E+GI+G D + Q++ NT
Sbjct: 89 LTDIVKEKELENLDRFGGVEGVAKALQTHVEYGIKGGDDDAEDITRRRQVFGSNTYHKPP 148
Query: 233 AREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAV 292
++ FF F+++A + IL+L+V AALS G E G K+GW+DG +I +AVF++++ AV
Sbjct: 149 SKGFFHFVVEAFKDVTILILMVCAALSLGFGIKEHGIKEGWYDGGSIFVAVFIVISLSAV 208
Query: 293 TNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVN 352
+NFR+ R+ +K + N +++ VVRSGR Q +++ ++ GDV+ L GD+VP DGL +
Sbjct: 209 SNFRQNRQFDKLS-QVSNDIQIDVVRSGRRQNVSIFEIVVGDVICLKIGDQVPADGLFIE 267
Query: 353 SDGLMLDDVLNS------EIDPDRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRS-- 404
L +D+ + EI +PFLFSG+KV +G+ ML+ SVG N GQ++ S
Sbjct: 268 GHSLKVDEASMTGESDHVEISRQNHPFLFSGTKVADGYAKMLVTSVGMNTTWGQMMSSIS 327
Query: 405 -------NLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFE----RF 453
L + L + + + L + GN T +K F +F
Sbjct: 328 QDIDEETPLQERLNKLTSSIGKVGLAVAFLVLVVLLVRYFTGNTKDETGIKEFNGSRTKF 387
Query: 454 LLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGI 513
+ I+ A+T+V +A+ G+P +T++L + K++ + A + LSA TMG
Sbjct: 388 DDIMNAVVGIVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQ-AMVRKLSACETMGS 446
Query: 514 ASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVP---- 569
A+ IC D TG L N + V+K +G + V +++ VLQ ++ G+ +
Sbjct: 447 ATTICTDKTGTLTLNEMKVTKVWLGLEPVLESAYTKVAPFVLQLIQEGVALNTTGSVHKS 506
Query: 570 -------EISLWPTTDWLVSWAK-SRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKING 621
E S PT ++SWA ++ +E + ++ S++ +S K GVL++
Sbjct: 507 NKSGSEFEFSGSPTEKAILSWAVLELNMEMENLTRSCSIIHVETFNSKKKRSGVLLR--- 563
Query: 622 GDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKR-RFQKLIKDMEDSGLRPIAF 680
D ++ HW G A +L MCS YYD+ G ++ ++ +F+ +I+ M S LR IAF
Sbjct: 564 RKVDNTVNAHWKGAAEMVLKMCSRYYDASGIVKDLDNDRMLKFEHIIQGMASSSLRCIAF 623
Query: 681 ACGQTEVSE-------------IKENGLHLLALAGL----REEIKSTVEALRNAGVRIIL 723
A EV+E +KENGL LL L G+ R+ +K+ VEA +NAGV I +
Sbjct: 624 A--HVEVAEEELVDEEGNAMAKVKENGLTLLGLVGIKDPCRQGVKNAVEACQNAGVNIKM 681
Query: 724 VSEDELLAVTEVACELGNFRP--ESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADD 781
++ D + +A E G RP +++ +EGE+FR ER+ K++ + +M D
Sbjct: 682 ITGDNVFTAKAIATECGILRPNQDTDGAVIEGEEFRNYTHEERLEKVEKICVMARSSPFD 741
Query: 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVG 839
KLL+VQ +K+KGHVVA G T D PALKEAD+G++ + TE+A+E SDIVI
Sbjct: 742 KLLMVQCLKQKGHVVAV-TGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFA 800
Query: 840 SLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYM 899
S++ +L+ GRC Y NIQKF + QLT + L I V + + P+T++QL+WV IM
Sbjct: 801 SVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGKVPLTAVQLLWVNLIMDT 860
Query: 900 LGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGM 959
LG L + E E + PP RTK L+ VMW++ Q L Q+ + L QF G+ I G+
Sbjct: 861 LGALALATEKPTMELMHKPPVGRTKPLITNVMWRNLLAQALYQIAILLTLQFKGESIFGV 920
Query: 960 NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFA 1019
+ + FN+F LCQVFN+F+A ++ K+ V + + L + I I QV++VEF
Sbjct: 921 TSGVNDTLIFNTFVLCQVFNEFNARKMEKRNVFKGIHRSKLFLGIIGITIILQVVMVEFL 980
Query: 1020 TSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFI 1053
A +RLN QWGIC LA + W I V I
Sbjct: 981 KKFADTERLNWGQWGICIGLAAVSWPIGWVVKLI 1014
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451326|ref|XP_002274001.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 331/971 (34%), Positives = 525/971 (54%), Gaps = 88/971 (9%)
Query: 152 LSTQSRHAIDIPSEIVEEEKS------EDRILP------DLLDRIVKARNLNLLKEIGGP 199
LS++S +ID+ V E+ S ++ +LP +L +V+ ++L L++ GG
Sbjct: 51 LSSRSYLSIDVQD--VHEDDSGHGRSGDEHVLPFRNVGQRMLTEMVRDKDLERLRQFGGV 108
Query: 200 EKVASAFGSHLEHGIQGDQLPQPQIWNTIKPNH-----AREFFLFLLKASNNFNILLLLV 254
+++ + G++ ++GI G + N N + F F+++AS + I++LL+
Sbjct: 109 KQLPALLGTNEKNGIDGHEADLIHRRNVFGSNEYTKPPKKGFLSFVVEASKDTTIIILLI 168
Query: 255 AAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEV 314
AALS G E+GP++GW+DG +I++A+ +++ +++NFR++ + K E + + V
Sbjct: 169 CAALSLGFGIKEEGPREGWYDGGSIIVAILLIVAVSSISNFRQSGQFHKFS-SESSDIRV 227
Query: 315 KVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDVLNS------EIDP 368
+VVR GR Q +++ L+ GD+V L GD+VP DGL + L +D+ + EI+
Sbjct: 228 QVVRQGRRQPVSIFQLVVGDIVFLNIGDQVPADGLFMEGHSLKVDESSMTGESDHVEINE 287
Query: 369 DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVL---RSNLS-----------LAVTV-- 412
NPF+FSG+KV +G GTML+ SVG N A G+++ R L LA T+
Sbjct: 288 KENPFMFSGTKVSDGFGTMLVTSVGMNTAWGEMMSSIRRELDEQTPLQARLDKLASTIGK 347
Query: 413 ---LIALVALIRLLWRKHSG---DDHELPELKGN-VSVGTVMKIFERFLLKPQGKISILV 465
+AL+ L+ L R +G DD E G+ + VM + ++
Sbjct: 348 LGLAVALIVLVVLFIRYFTGNIEDDSGNREFNGSKTKIDNVM----------NSVVHLVS 397
Query: 466 SALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGL 525
+A+TV+ IA+ G+P +T++L + +++ + A + LSA TMG + IC D TG L
Sbjct: 398 AAVTVLVIAIPEGLPMAVTLTLAYSMRRMMTDQ-ALVRKLSACETMGSVTTICTDKTGTL 456
Query: 526 VCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIG----------ASVLVPEISLWP 575
N++ V +F + + + ++ + VL+ L++G+G S VPEIS P
Sbjct: 457 TLNKMKVVEFWLESEVIKDETYRGVAPTVLELLKQGVGLNTTGSVCKLPSTSVPEISGSP 516
Query: 576 TTDWLVSWAKSRSLNVEFVDQNLS--VLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWS 633
T +++WA L ++ +Q LS +L +S K GVLV D +H+HW
Sbjct: 517 TESAILTWALV-DLGMDIDEQKLSFEILHVEAFNSQKKRSGVLVNRIA---DNTIHIHWK 572
Query: 634 GTASTILNMCSYYYDSEGKSFEIKGEKR-RFQKLIKDMEDSGLRPIAFACGQTEVSEIKE 692
G A IL MCS+YYD G + +KR +F LI+DM LR IAFA Q +++E
Sbjct: 573 GAAEMILAMCSHYYDKSGIVKVMDDKKRGQFGGLIRDMAAKSLRCIAFAYKQALQEKLEE 632
Query: 693 NGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES-- 746
G+ LL L GL++ ++ VE R+AGV + +++ D + +A E G +P+
Sbjct: 633 TGMILLGLVGLKDPCRPGVRRAVEVCRDAGVNVKMITGDNIFTAKAIAMECGILKPDEDF 692
Query: 747 NDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRD 806
N+ +EG FR + ERM K+D + +M DKLL+VQS+K+KGHVVA G T D
Sbjct: 693 NNAVVEGVTFRNYSHRERMDKIDIIRVMARSSPFDKLLMVQSLKKKGHVVAV-TGDGTND 751
Query: 807 TPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQKFTKLQLT 864
PALKEAD+G++ + TE+A+E SDIVI S++ ++K GRC Y N+QKF + QLT
Sbjct: 752 APALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVMKWGRCVYNNLQKFIQFQLT 811
Query: 865 GCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTK 924
+ L I V + + P+T++QL+WV I G L + E + + PP R+K
Sbjct: 812 INVAALGINFVAAVASGKVPLTAVQLLWVNLIQDTFGALALATEQPTNDLLMKPPVGRSK 871
Query: 925 SLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAM 984
L+ VMW++ Q L Q+ V LI Q+ G I G++ I + FN+F LCQVFN+F+A
Sbjct: 872 PLITNVMWRNLISQALYQISVLLILQYKGSSIFGVDEKINNTLIFNTFVLCQVFNEFNAR 931
Query: 985 RLLKKA--VLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVL 1042
+ KK +LK + + I IA QV++VEF A +RL+ QWG+C LA L
Sbjct: 932 NMDKKNKFFFKGILKNRLFVGIIGITIALQVVMVEFLKRFANTERLDWGQWGVCIGLAAL 991
Query: 1043 PWGIHRAVNFI 1053
W I V ++
Sbjct: 992 SWPIDWLVKYL 1002
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357468545|ref|XP_003604557.1| Plasma membrane calcium-transporting ATPase [Medicago truncatula] gi|355505612|gb|AES86754.1| Plasma membrane calcium-transporting ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 324/901 (35%), Positives = 493/901 (54%), Gaps = 73/901 (8%)
Query: 184 IVKARNLNLLKEIGGPEKVASAFGSHLEHGIQGDQLPQPQIWNTIKPNHAREFFLFLLKA 243
IVK ++L L E GG +V + H I N FF FL
Sbjct: 66 IVKEKDLKSLLEFGGVGRVCDVLRGQIHHSSA----------EKITRNLGSSFFDFLWYT 115
Query: 244 --SNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKL 301
N + LLL++A S G +E+G K GWHDG AI +V ++L F ++T+F R RK+
Sbjct: 116 IKDNRCTVSLLLISALFSLAIGYMEEGLKYGWHDGVAIAFSVLLMLAFSSITSFWRHRKM 175
Query: 302 EKKQWEEKNKLEVKV-VRSGR-----EQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDG 355
K + K K EVK V+ G + ++ S+++ GD++ L+ D VP DGL+V+
Sbjct: 176 MNKPTKRKGK-EVKFNVKRGEVSQSVDLDLSASDIVVGDMMFLSPHDEVPADGLLVSHGI 234
Query: 356 LMLDDVLNSE-IDPDRNPFLFSGSKVMEGHGTMLLISV---------GGNIASGQVLRSN 405
L+L + E +D D NPFL +GS+V+ G+G M++ SV +++S R
Sbjct: 235 LVLAKGIKKEKVDRDDNPFLIAGSEVIAGYGQMIVTSVRNESDFAEMNCSMSSHFEKRGL 294
Query: 406 L--------------SLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFE 451
L SL + L+A V I + K GD LP++K VSVG +M++ E
Sbjct: 295 LEKLIEKPISYLDKASLFIFTLVAFVVFIHQICEK-DGDGDGLPDMK--VSVGLLMELLE 351
Query: 452 RFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATM 511
LL+P+G+ISIL T + VQHGMP ++T SL + + ++ + A +LSA TM
Sbjct: 352 NILLRPRGRISILACVFTAAILFVQHGMPRMVTFSLHYHINDVVPDEEAVFNDLSACTTM 411
Query: 512 GIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEI 571
G+ +VIC+DV+G L+ ++VS+ +GE + VL L+ G+ S++ PE+
Sbjct: 412 GLVTVICVDVSGRLISKPMEVSEIWMGEGETEICEVEGSETVVLDKLKEGVVLSIISPEL 471
Query: 572 SLWPTTDWLVSWAKSR-SLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHM 630
SL P + LVSWA+++ ++ + + +H KL+S+ GVLVK G E +++H+
Sbjct: 472 SLSPRSSALVSWAETKCEMDTNSFIERFDIFKHNKLNSDKGGSGVLVKEVLGTE-QVLHL 530
Query: 631 HWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEI 690
HWSG+ASTIL CS YYD +G+ ME SGL+PIAFA +T + +
Sbjct: 531 HWSGSASTILETCSRYYDGQGEC---------------HMEGSGLKPIAFAYRKTYLQVL 575
Query: 691 KENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES 746
+++ L LLAL G RE IKS ++ ++N G++I L+SED++ V E+A ELG P
Sbjct: 576 EQDDLTLLALIGFKEKSRESIKSALQGVQNTGIKIKLISEDDIDLVEEIAYELGIEVPVG 635
Query: 747 NDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGS--ST 804
LEG++F++L+ R ++D MGS A+DKL +V +++KG VVAF +
Sbjct: 636 GH--LEGKEFKDLHEGARFDEVDKAIAMGSFCAEDKLCMVNYLQDKGDVVAFIDQRLITR 693
Query: 805 RDTPALKEADVGITEENKC-TEMARECSDIVISAVGSLLPILKLGRCAYCNIQKFTKLQL 863
+ LK ADVGI N +M + I ++ +L PI+K GR Y NIQKF +LQL
Sbjct: 694 HASEVLKVADVGIVSLNSLRKKMDKGSCGITMTCFSALEPIVKAGRRKYHNIQKFIQLQL 753
Query: 864 TGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRT 923
T SGLLITL+TT+ SP+T+IQ+IW+ +M +LGGL+M ME +E + P R
Sbjct: 754 TVSISGLLITLITTIFTGNSPLTAIQMIWINVLMCLLGGLMMVMELSREEELAKQPCDRN 813
Query: 924 KSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDA 983
+ ++ + K+ QVL Q + +I QF G + + +RK M FN+F CQ+FN +
Sbjct: 814 QPIITMKILKNIVYQVLYQAFLCMILQFGGHITHS-EKQVRKTMIFNTFLFCQLFNLLNN 872
Query: 984 MRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVLP 1043
+ LLKK L ++++ + + QVLV+++A LA LN W IC +++ L
Sbjct: 873 VYLLKKQGLKMIVQNLIFSVALGSCVVMQVLVIQYAKGLADCVPLNTAGWTICVLVSALS 932
Query: 1044 W 1044
W
Sbjct: 933 W 933
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432838|ref|XP_002279864.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 330/976 (33%), Positives = 517/976 (52%), Gaps = 65/976 (6%)
Query: 135 SYAPVPTSSVEQGLCRNLSTQSRHAIDIPSEIVEEEKSE--DRILPDLLDRIVKARNLNL 192
++A + + V L S+ + PS +V K + I L IVK +NL L
Sbjct: 32 AFATIYCARVLHSLLNEKKNSSKLPVATPSFVVLNVKPDAFSSIDQTTLTEIVKEKNLKL 91
Query: 193 LKEIGGPEKVASAFGSHLEHGIQG--DQLPQPQIW---NTIKPNHAREFFLFLLKASNNF 247
L E GG E VA A + +++GI G D + Q NT K + F F+++A +
Sbjct: 92 LLESGGVEGVADALETDIKNGISGAVDDVALRQEAFGSNTYKRPPTKSLFHFVVEAFKDL 151
Query: 248 NILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWE 307
IL+LL AALS G E G K+GW+DG +I +AV ++++ AV+NFR+ R+ EK +
Sbjct: 152 TILILLFCAALSLGFGIKEHGLKEGWYDGGSIFVAVILVISVSAVSNFRQNRQFEKLS-K 210
Query: 308 EKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDVLNS--- 364
N +++ V R+GR Q I++ ++ GDVV L GD+VP DGL ++ L +D+ +
Sbjct: 211 VSNNIKIDVFRNGRRQQISIFEIVVGDVVSLKIGDQVPADGLFLDGHSLQVDESSMTGES 270
Query: 365 ---EIDPDRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVL---------RSNLSLAVTV 412
E++ NPFLFSG+KV +G+ ML+ SVG N GQ++ ++ L +
Sbjct: 271 DHVEVNSSHNPFLFSGTKVADGYAQMLVTSVGMNTTWGQMMSTISRDTNEQTPLQARLNK 330
Query: 413 LIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKP----QGKISILVSAL 468
L + + L + GN + F K + I+ +A+
Sbjct: 331 LTSSIGKAGLAVAFLVLLVLLVRYFTGNTEDENGNQEFNGSKTKADDIVNAVVEIIATAV 390
Query: 469 TVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCN 528
T+V +A+ G+P +T++L + + K ++ A + LSA TMG A+ IC D TG L N
Sbjct: 391 TIVVVAIPEGLPLAVTLTLAY-SMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTMN 449
Query: 529 RVDVSKFCIGEKDVNNDVASEINQAVLQALERGIG----ASVLVPEISLW-------PTT 577
++ V+K +G++ + +V+S I++ +L +++G+ SV + PT
Sbjct: 450 QMKVTKIWLGQEPI--EVSSSISENLLNLIQQGVALNTTGSVYRATSGSYKFEFFGSPTE 507
Query: 578 DWLVSWAK-SRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTA 636
++SWA +++E + QN ++L +S K GV ++ D +H+HW G A
Sbjct: 508 KAILSWAVLELDMDMEILKQNCTILHVEAFNSEKKRSGVSIR---SKADNTIHVHWKGAA 564
Query: 637 STILNMCSYYYDSEGKSFEIKG-EKRRFQKLIKDMEDSGLRPIAFACGQT-----EVSE- 689
IL MCS YYD+ G ++ E++ F+++I+ M S LR IAFA Q E+ E
Sbjct: 565 EMILAMCSSYYDASGSMKDLDDCERKTFEQIIQGMAASSLRCIAFAHKQILEEEHEIREA 624
Query: 690 ---IKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 742
+KE+GL + L G+++ ++ VE ++AGV + +++ D + +A E G
Sbjct: 625 TQKLKEDGLAFVGLVGIKDPCRPGVRKAVEDCQHAGVNVKMITGDNVFTARAIATECGIL 684
Query: 743 RPE---SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFF 799
RP+ +N+ +EGE FR ERM K+D + +M DKLL+VQ +K+ GHVVA
Sbjct: 685 RPDQGINNEAVVEGEVFRNYTPEERMEKVDKIRVMARSSPFDKLLMVQCLKQNGHVVAV- 743
Query: 800 GGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQK 857
G T D PALKEAD+G++ + TE+A+E SDI+I S+ +L+ GRC Y NIQK
Sbjct: 744 TGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGRCVYNNIQK 803
Query: 858 FTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTN 917
F + QLT + L+I V + E P+T++QL+WV IM LG L + E E +
Sbjct: 804 FIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEQPTNELMDR 863
Query: 918 PPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQV 977
PP RT L+ +MW++ Q + Q+ V L QF G+ I G++ ++ + FN+F LCQV
Sbjct: 864 PPVGRTGPLITNIMWRNLLAQAMYQIAVLLTLQFKGESIFGVSEKVKDTLIFNTFVLCQV 923
Query: 978 FNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICF 1037
FN+F+A RL KK V + K L + I I QV++VEF A +RLN QWG C
Sbjct: 924 FNEFNARRLEKKNVFEGIHKNKLFLGIIGITIILQVVMVEFLKKFADTERLNWGQWGACL 983
Query: 1038 ILAVLPWGIHRAVNFI 1053
+A + W + V I
Sbjct: 984 GIAAVSWPLGWVVKCI 999
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1108 | ||||||
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.432 | 0.463 | 0.380 | 3.1e-110 | |
| TAIR|locus:2084578 | 1017 | AT3G22910 [Arabidopsis thalian | 0.428 | 0.467 | 0.344 | 8e-100 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.317 | 0.324 | 0.324 | 1.1e-93 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.319 | 0.331 | 0.326 | 2e-90 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.509 | 0.551 | 0.278 | 2.5e-83 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.327 | 0.337 | 0.331 | 3.7e-78 | |
| DICTYBASE|DDB_G0289473 | 1077 | DDB_G0289473 "Ca2+-ATPase" [Di | 0.392 | 0.403 | 0.290 | 5.3e-67 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.512 | 0.551 | 0.254 | 2.5e-65 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.507 | 0.553 | 0.246 | 6.8e-62 | |
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.526 | 0.571 | 0.239 | 7.5e-62 |
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 772 (276.8 bits), Expect = 3.1e-110, Sum P(3) = 3.1e-110
Identities = 190/499 (38%), Positives = 263/499 (52%)
Query: 569 PEISLWPTTDWLVSWAK-SRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKI 627
PE S PT L+SW + +++E V Q VL SS K GVLV+ D
Sbjct: 512 PEFSGSPTEKALLSWTVLNLGMDMESVKQKHEVLRVETFSSAKKRSGVLVRRKS---DNT 568
Query: 628 MHMHWSGTASTILNMCSYYYDSEGKSFEIKGE--KRRFQKLIKDMEDSGLRPIAFACG-Q 684
+H+HW G A +L MCS+YY S G S ++ K R Q +I+ M S LR IAFA
Sbjct: 569 VHVHWKGAAEMVLAMCSHYYTSTG-SVDLMDSTAKSRIQAIIQGMAASSLRCIAFAHKIA 627
Query: 685 TEVSEIKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELG 740
+ S ++E+GL L+ + GL++ + VE + AGV I +++ D + +A E G
Sbjct: 628 SNDSVLEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFECG 687
Query: 741 ----NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVV 796
N + E D +EG QFR ERM K+D + +M DKLL+V+ ++ KGHVV
Sbjct: 688 ILDHNDKDEE-DAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVV 746
Query: 797 AFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCN 854
A G T D PALKEAD+G++ + TE+A+E SDIVI S+ +LK GRC Y N
Sbjct: 747 AVTG-DGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNN 805
Query: 855 IQKFTKLQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEP 914
IQKF + QLT + E P+T++QL+WV IM LG L + E E
Sbjct: 806 IQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNEL 865
Query: 915 VTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTL 974
+ P RT++L+ VMW++ VQ L Q+ V LI QF G I + ++++ + FN+F L
Sbjct: 866 LKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEVKDTLIFNTFVL 925
Query: 975 CQVFNQFDAMRXXXXXXXXXXXXXFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWG 1034
CQVFN+F+A + + I I QV++VEF A RLNG QWG
Sbjct: 926 CQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQWG 985
Query: 1035 ICFILAVLPWGIHRAVNFI 1053
C LA L W I FI
Sbjct: 986 TCIALASLSWPIGFFTKFI 1004
|
|
| TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 717 (257.5 bits), Expect = 8.0e-100, Sum P(2) = 8.0e-100
Identities = 169/490 (34%), Positives = 258/490 (52%)
Query: 570 EISLWPTTDWLVSWA-KSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIM 628
E S PT ++SWA + + +E V + V+ +S K GVL+K G + + +
Sbjct: 506 EFSGSPTEKAILSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKRSGVLMKKKGVNTENNV 565
Query: 629 HMHWSGTASTILNMCSYYYDSEGKSFEIK-GEKRRFQKLIKDMEDSGLRPIAFACGQT-- 685
+HW G A IL MCS + D G E+K +K +F+K+I+ M LR IAFA +
Sbjct: 566 -VHWKGAAEKILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAKSLRCIAFAYSEDNE 624
Query: 686 EVSEIKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELGN 741
+ ++KE L LL + G+++ +K VE + AGV I +++ D + +A E G
Sbjct: 625 DNKKLKEEKLSLLGIIGIKDPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAIAVECGI 684
Query: 742 FRPE---SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAF 798
PE +++ LEGE+FR ER+ K++ + +M DKLL+V+ +KE GHVVA
Sbjct: 685 LTPEDEMNSEAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKELGHVVAV 744
Query: 799 FGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQ 856
G T D PALKEAD+G++ + TE+A+E SDIVI S+ +LK GRC Y NIQ
Sbjct: 745 TG-DGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQ 803
Query: 857 KFTKLQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVT 916
KF + QLT + + P+T++QL+WV IM LG L + E + +
Sbjct: 804 KFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMK 863
Query: 917 NPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQ 976
P R L+ +MW++ Q Q+ V L+ QF G+ I + ++ + FN+F LCQ
Sbjct: 864 KKPIGRVAPLITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNVTEKVKNTLIFNTFVLCQ 923
Query: 977 VFNQFDAMRXXXXXXXXXXXXXFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGIC 1036
VFN+F+A + + ++ + QV++VEF A +RLN QWG+C
Sbjct: 924 VFNEFNARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQWGVC 983
Query: 1037 FILAVLPWGI 1046
+A W I
Sbjct: 984 IAIAAASWPI 993
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 484 (175.4 bits), Expect = 1.1e-93, Sum P(3) = 1.1e-93
Identities = 121/373 (32%), Positives = 193/373 (51%)
Query: 690 IKENGLHLLALAGLREEIKSTV-EALR---NAGVRIILVSEDELLAVTEVACELGNFRPE 745
+ E+ L LLA+ G+++ + V EA+R +AGV++ +V+ D L +A E G +
Sbjct: 684 LPEDELILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAKAIALECGILSSD 743
Query: 746 SNDIA---LEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGS 802
+ + +EG+ FREL+ ER +T+MG +DKLLLVQ++++ G VVA G
Sbjct: 744 TEAVEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKNGDVVAVTG-D 802
Query: 803 STRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQKFTK 860
T D PAL EAD+G++ TE+A+E SDI+I S++ +++ GR Y NIQKF +
Sbjct: 803 GTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQ 862
Query: 861 LQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPA 920
QLT + + P+ ++QL+WV IM LG L + E + P
Sbjct: 863 FQLTVNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHLMHRTPV 922
Query: 921 RRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRD-------IRKAMTFNSFT 973
R + L+ +MW++ VQ QV V L+ FAG I G+N + ++ M FN+F
Sbjct: 923 GRREPLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTMIFNAFV 982
Query: 974 LCQVFNQFDAMRXXXXXXXXXXXXXFNVLMVFLIVIA--AQVLVVEFATSLAGYQRLNGM 1031
+CQ+FN+F+A + N L V ++ + Q+++V F A RL
Sbjct: 983 MCQIFNEFNARKPDEMNVFRGVNK--NPLFVAIVGVTFILQIIIVTFLGKFAHTVRLGWQ 1040
Query: 1032 QWGICFILAVLPW 1044
W I+ ++ W
Sbjct: 1041 LWLASIIIGLVSW 1053
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 498 (180.4 bits), Expect = 2.0e-90, Sum P(3) = 2.0e-90
Identities = 121/371 (32%), Positives = 193/371 (52%)
Query: 689 EIKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 744
E+ E+ L LLA+ G+++ +K++V + AGV++ +V+ D + +A E G
Sbjct: 670 ELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIALECGILAS 729
Query: 745 ESNDIA---LEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGG 801
+S+ +EG+ FR + ER + +++MG +DKLLLVQS+K +GHVVA G
Sbjct: 730 DSDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRRGHVVAVTG- 788
Query: 802 SSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQKFT 859
T D PAL EAD+G+ + TE+A+E SDI+I S++ +++ GR Y NIQKF
Sbjct: 789 DGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKFI 848
Query: 860 KLQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPP 919
+ QLT + E P+T++QL+WV IM LG L + E + P
Sbjct: 849 QFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMDRAP 908
Query: 920 ARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVI------PGMNRDIRKAMTFNSFT 973
R + L+ +MW++ +Q + QV V LI F G I P R ++ + FN+F
Sbjct: 909 VGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNAER-VKNTVIFNAFV 967
Query: 974 LCQVFNQFDAMRXXXXXXXXXXXXXFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQW 1033
+CQVFN+F+A + + + I I QV++VEF + A +L+ W
Sbjct: 968 ICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVIVEFLGTFASTTKLDWEMW 1027
Query: 1034 GICFILAVLPW 1044
+C + + W
Sbjct: 1028 LVCIGIGSISW 1038
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 582 (209.9 bits), Expect = 2.5e-83, Sum P(2) = 2.5e-83
Identities = 167/599 (27%), Positives = 287/599 (47%)
Query: 467 ALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLV 526
A+T++ +AV G+P +T+SL F K L++ A ++L+A TMG ++ IC D TG L
Sbjct: 399 AVTIIVVAVPEGLPLAVTLSLAFAM-KQLMSDRALVRHLAACETMGSSTCICTDKTGTLT 457
Query: 527 CNRVDVSK--FC--IGEKDVNN---DVASEINQAVLQALERGIGASVLVP-----EISLW 574
N + V+K C I E+ N +++ ++ ++QA+ + G+ V+ +I
Sbjct: 458 TNHMVVNKVWICENIKERQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGS 517
Query: 575 PTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSG 634
PT ++ + +V+ + +L+ +S+ K VL +GG K+ G
Sbjct: 518 PTERAILEFGLLLGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGG---KV-RAFCKG 573
Query: 635 TASTILNMCSYYYDSEGKSFEIKGEK-RRFQKLIKDMEDSGLRPIAFACGQTEVS---EI 690
+ +L MC DS G+S + EK +I+ LR + + + ++
Sbjct: 574 ASEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGDL 633
Query: 691 KENGLHLLALAGLREEIKSTV-EALRN---AGVRIILVSEDELLAVTEVACELGNFRPES 746
G L+A+ G+++ ++ V EA++ AG+ + +V+ D + +A E G +
Sbjct: 634 PNGGYTLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILT--A 691
Query: 747 NDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRD 806
+A+EG FR L E A L + +M L DK LV ++++ G VVA G T D
Sbjct: 692 GGVAIEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRKMGEVVAVTG-DGTND 750
Query: 807 TPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQKFTKLQLT 864
PAL EAD+G+ TE+A+E +D++I +++ + K GR Y NIQKF + QLT
Sbjct: 751 APALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLT 810
Query: 865 GCASGXXXXXXXXXXXEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTK 924
+P+T++QL+WV IM LG L + E ++ + P RT
Sbjct: 811 VNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTA 870
Query: 925 SLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRD----IRKAMTFNSFTLCQVFNQ 980
S + + MW++ Q + Q+ V I FAG+ I +N + + FNSF CQVFN+
Sbjct: 871 SFITRAMWRNIIGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQVFNE 930
Query: 981 FDAMRXXXXXXXXXXXXXFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFIL 1039
++ + + V + QV++VEF + A L+ W +C ++
Sbjct: 931 VNSREIEKINVFEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLCILI 989
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 534 (193.0 bits), Expect = 3.7e-78, Sum P(3) = 3.7e-78
Identities = 126/380 (33%), Positives = 196/380 (51%)
Query: 690 IKENGLHLLALAGLREE----IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE 745
+ E+ L LLA+ G+++ +K +V +NAGV++ +V+ D + +A E G +
Sbjct: 667 LPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALECGILSSD 726
Query: 746 ---SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGS 802
S +EG+ FRE+ ER D +++MG +DKLLLVQS++ +GHVVA G
Sbjct: 727 ADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQGHVVAVTG-D 785
Query: 803 STRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQKFTK 860
T D PAL EAD+G+ TE+A+E SDI+I S++ +++ GR Y NIQKF +
Sbjct: 786 GTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQ 845
Query: 861 LQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPA 920
QLT + + P+T++QL+WV IM LG L + E + PP
Sbjct: 846 FQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRPPV 905
Query: 921 RRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMT-------FNSFT 973
R + L+ +MW++ +Q + QV V L F G I G+ ++ + T FN+F
Sbjct: 906 GRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFV 965
Query: 974 LCQVFNQFDAMRXXXXXXXXXXXXXFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQW 1033
LCQ FN+F+A + + + +I + QV++VEF A +LN QW
Sbjct: 966 LCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFASTTKLNWKQW 1025
Query: 1034 GICFILAVLPWGIHRAVNFI 1053
IC + V+ W + FI
Sbjct: 1026 LICVGIGVISWPLALVGKFI 1045
|
|
| DICTYBASE|DDB_G0289473 DDB_G0289473 "Ca2+-ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 422 (153.6 bits), Expect = 5.3e-67, Sum P(3) = 5.3e-67
Identities = 136/468 (29%), Positives = 209/468 (44%)
Query: 607 SSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQK 665
SS K+ VL+ N ++ ++ G A +LN C+ D G+S ++ + EK QK
Sbjct: 516 SSEKKMSAVLMNQNQNISGGLI-IYVKGAAEIVLNNCTNIVDKNGESTQMSRDEKMLLQK 574
Query: 666 LIKDMEDSGLRPIAFACGQ--TEVSEIKE-----NGLHLLALAGL----REEIKSTVEAL 714
I+ GLR + A + E S E GL L L G+ R+E+ V+
Sbjct: 575 DIEIFASEGLRTLVLAYKEINNEPSSEDEAKVIYTGLTFLGLVGIKDPVRKEVPRAVKRC 634
Query: 715 RNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM 774
+ AG+ + +++ D +L +A E G + +A+EG QFR L + + + ++
Sbjct: 635 QGAGIFVRMLTGDNILTAKNIARECGILK--DGGVAIEGPQFRLLTDDQLDTIIPHLQVI 692
Query: 775 GSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIV 834
C DK LV ++E G VVA G D P LKEADVG + TE+A+E SDIV
Sbjct: 693 ARCSPTDKFRLVHRLRELGEVVAVTG-DGVNDAPQLKEADVGFSMGIAGTEVAKEASDIV 751
Query: 835 I--SAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGXXXXXXXXXXXEESPITSIQLIW 892
+ S+ + GR Y +I+KF + QLT ESP+ +QL+W
Sbjct: 752 LLDDNFNSIAKAVIWGRNVYDSIRKFIQFQLTVNIVAVLIAFVGSITNGESPLRPVQLLW 811
Query: 893 VYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVG-VFLIFQF 951
V IM LG L + E +E P R SL+ MW++ Q + Q+ +F I
Sbjct: 812 VNLIMDTLGALALSTEPPSEELFNRRPYGRFDSLITYRMWRNIIGQSIYQIAFLFSIMYS 871
Query: 952 AGQVI-----PGMN------RDIRKAMTFNSFTLCQVFNQFDAMRXXXXXXXXXXXXXFN 1000
A ++ P ++ + + + FN+F CQ FN+ +
Sbjct: 872 AASMVELFDLPRVDQWTTNDKTVYHTIIFNTFVFCQFFNEINCRVLDNQLNVFRNIHKSY 931
Query: 1001 VLM-VFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAV--LPWG 1045
V + V I QV++VEF G + L+ QW C I+ L WG
Sbjct: 932 VFVGVVSFCIFIQVILVEFGGEFFGTRHLDYKQWFFCIIIGFGSLIWG 979
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 476 (172.6 bits), Expect = 2.5e-65, Sum P(2) = 2.5e-65
Identities = 155/610 (25%), Positives = 279/610 (45%)
Query: 461 ISILVSALTV-VAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICI 519
++I+V A+ + +AV + F + + +D+ L+ H A + + + + +
Sbjct: 400 VTIIVVAVPEGLPLAVTLSLAFAMKKLM---SDRALVRHLAACETMGSSTCICTDKTGTL 456
Query: 520 DVTGGLVCNRV---D-VSKFCIGEKD-VNNDVASEINQAVLQALERGIGASVLVPEISLW 574
T +V N+V D V + G K+ +++ E+ +LQ + + G+ V+ +
Sbjct: 457 -TTNHMVVNKVWICDKVQERQEGSKESFELELSEEVQSTLLQGIFQNTGSEVVKDKDG-- 513
Query: 575 PTTDWLVSWAKSRSLNVEFV---DQNLSVLEHRKL-----SSNNKVCGVLVKINGGDEDK 626
T L S + L + D N EH+ L +S+ K VL+ + GG
Sbjct: 514 -NTQILGSPTERAILEFGLLLGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARA 572
Query: 627 IMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEK-RRFQKLIKDMEDSGLRPIAFA---C 682
G + +L MC DS G+S + E+ +I+ LR +
Sbjct: 573 FC----KGASEIVLKMCENVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKDL 628
Query: 683 GQTEVSEIKENGLHLLALAGLREEIKSTV-EALRN---AGVRIILVSEDELLAVTEVACE 738
+ E+ + G ++A+ G+++ ++ V EA++ AG+ + +V+ D + +A E
Sbjct: 629 DEAPSGELPDGGYTMVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKE 688
Query: 739 LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAF 798
G + +A+EG +FR+L+ E A + + +M L DK LV ++++ G VVA
Sbjct: 689 CGIYT--EGGLAIEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRKIGEVVAV 746
Query: 799 FGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQ 856
G T D PAL EAD+G+ TE+A+E +D++I +++ + + GR Y NIQ
Sbjct: 747 TG-DGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQ 805
Query: 857 KFTKLQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVT 916
KF + QLT +P+T++QL+WV IM LG L + E ++ +
Sbjct: 806 KFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMK 865
Query: 917 NPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRD----IRKAMTFNSF 972
P RT S + K MW++ A Q + Q+ V I FAG+ + ++ + + FNSF
Sbjct: 866 RAPIARTASFITKTMWRNIAGQSVYQLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSF 925
Query: 973 TLCQVFNQFDAMRXXXXXXXXXXXXXFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQ 1032
CQVFN+ ++ + V + + QV++VEF + A L+
Sbjct: 926 VFCQVFNEINSREIEKINVFKGMFNSWVFTWVMTVTVVFQVIIVEFLGAFASTVPLSWQH 985
Query: 1033 WGICFILAVL 1042
W + ++ L
Sbjct: 986 WLLSILIGSL 995
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 459 (166.6 bits), Expect = 6.8e-62, Sum P(2) = 6.8e-62
Identities = 148/601 (24%), Positives = 261/601 (43%)
Query: 461 ISILVSALTV-VAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATM-----GIA 514
++I+V A+ + +AV + F + + NDK L+ H A + + + T+ G
Sbjct: 404 VTIVVVAVPEGLPLAVTLSLAFAMKKMM---NDKALVRHLAACETMGSATTICSDKTGTL 460
Query: 515 SVICIDVTGGLVCNRV-DVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLV----- 568
+ + V +C V DV+ + +D+ + +LQ + G V+V
Sbjct: 461 TTNHMTVVKSCICMNVQDVAS---KSSSLQSDIPEAALKLLLQLIFNNTGGEVVVNERGK 517
Query: 569 PEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIM 628
EI PT ++ S + Q+ V++ +S K GV++++ G +
Sbjct: 518 TEILGTPTETAILELGLSLGGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGR---I 574
Query: 629 HMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKL-IKDMEDSGLRPIAFACGQTE- 686
H G + +L C +S G+ + E +F + I + + LR + A E
Sbjct: 575 RAHTKGASEIVLAACDKVINSSGEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIES 634
Query: 687 ---VSE-IKENGLHLLALAGLREEIK----STVEALRNAGVRIILVSEDELLAVTEVACE 738
E I E G + + G+++ ++ +VE R AG+ + +V+ D + +A E
Sbjct: 635 GFSADEGIPEKGFTCIGIVGIKDPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARE 694
Query: 739 LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAF 798
G + IA+EG FRE N E + + + +M DK LV+ ++ V
Sbjct: 695 CGILTDDG--IAIEGPVFREKNQEEMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVA 752
Query: 799 FGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQ 856
G T D PAL EAD+G+ TE+A+E +D++I +++ + K GR Y NIQ
Sbjct: 753 VTGDGTNDAPALHEADIGLAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQ 812
Query: 857 KFTKLQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVT 916
KF + QLT +P+T++QL+WV IM LG L + E + E +
Sbjct: 813 KFVQFQLTVNVVALIVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMK 872
Query: 917 NPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGM-NRD---IRKAMTFNSF 972
P R + + MW++ Q + Q + I Q G+ + G+ D + + FN F
Sbjct: 873 RMPVGRRGNFITNAMWRNILGQAVYQFIIIWILQAKGKSMFGLVGSDSTLVLNTLIFNCF 932
Query: 973 TLCQVFNQFDAMRXXXXXXXXXXXXXFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQ 1032
CQVFN+ + + ++V + Q++++EF + A L +Q
Sbjct: 933 VFCQVFNEVSSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTIVQ 992
Query: 1033 W 1033
W
Sbjct: 993 W 993
|
|
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 454 (164.9 bits), Expect = 7.5e-62, Sum P(2) = 7.5e-62
Identities = 149/621 (23%), Positives = 274/621 (44%)
Query: 461 ISILVSALTV-VAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATM-----GIA 514
++I+V A+ + +AV + F + + NDK L+ + A + + + T+ G
Sbjct: 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMM---NDKALVRNLAACETMGSATTICSDKTGTL 461
Query: 515 SVICIDVTGGLVCNRV-DVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLV----- 568
+ + V +C + +V+ K + S + + +LQ++ G ++V
Sbjct: 462 TTNHMTVVKACICEQAKEVNGPDAAMKFASGIPESAV-KLLLQSIFTNTGGEIVVGKGNK 520
Query: 569 PEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIM 628
EI PT L+ + S + + V Q +V++ +S K GV++++ ++
Sbjct: 521 TEILGTPTETALLEFGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIEL----PERHF 576
Query: 629 HMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQK-LIKDMEDSGLRPIAFACGQT-- 685
H G + +L+ C Y + +G+ + + K +I++ LR + A +
Sbjct: 577 RAHCKGASEIVLDSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGD 636
Query: 686 EVS---EIKENGLHLLALAGLREEI----KSTVEALRNAGVRIILVSEDELLAVTEVACE 738
E S I G + + G+++ + K +V ++AG+ + +V+ D L +A E
Sbjct: 637 EFSLEAPIPSGGYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARE 696
Query: 739 LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAF 798
G + IA+EG +FRE + E + + + +M DK LV+ ++ V
Sbjct: 697 CGILTDDG--IAIEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVA 754
Query: 799 FGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQ 856
G T D PAL EAD+G+ TE+A+E +D++I +++ + K GR Y NIQ
Sbjct: 755 VTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQ 814
Query: 857 KFTKLQLTGCASGXXXXXXXXXXXEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVT 916
KF + QLT +P+T++QL+WV IM LG L + E + +
Sbjct: 815 KFVQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMK 874
Query: 917 NPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMN---RDIR-KAMTFNSF 972
P R + + VMW++ Q L Q+ + Q G+ + G++ D+ + FN F
Sbjct: 875 RSPVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIF 934
Query: 973 TLCQVFNQFDAMRXXXXXXXXXXXXXFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQ 1032
CQVFN+ + + + V + QV+++E + A LN Q
Sbjct: 935 VFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLGQ 994
Query: 1033 WGICFILAVLPWGIHRAVNFI 1053
W + IL L + A+ I
Sbjct: 995 WLVSIILGFLGMPVAAALKMI 1015
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1108 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-113 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 4e-81 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-50 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 3e-31 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-30 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-25 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 4e-19 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-18 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 5e-18 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-15 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 3e-11 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-10 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-08 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-08 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-07 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-07 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 3e-06 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 2e-04 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 4e-04 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 9e-04 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 0.001 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 0.001 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 0.002 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 0.004 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 0.004 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 374 bits (963), Expect = e-113
Identities = 262/944 (27%), Positives = 434/944 (45%), Gaps = 102/944 (10%)
Query: 175 RILPDLLDRIVKARNLNLLKEIGGPEKVASAFGSHLEHGIQG---DQLPQPQIW--NTIK 229
IL DL D + R + L +++GG E +A+ + L G++ + +++ N +
Sbjct: 23 SILTDLTD--IFKRAMPLYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELP 80
Query: 230 PNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQG-----PKDGWHDGAAILIAVF 284
+ F + A ++ ++LL VAA +S V G E G + GW +G AIL++V
Sbjct: 81 EKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVI 140
Query: 285 VLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRV 344
+++ AV ++++ + + EK+ ++ V+R G+EQ I++ +++ GD+V L+ GD V
Sbjct: 141 LVVLVTAVNDYKKELQFRQLN-REKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVV 199
Query: 345 PGDGLVVNSDGLMLDDV-LNSEIDP-----DRNPFLFSGSKVMEGHGTMLLISVGGNIAS 398
P DG+ ++ L +D+ + E DP ++PFL SG+ V EG G ML+ +VG N
Sbjct: 200 PADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFG 259
Query: 399 GQ-------------VLRSNLS----------LAVTVLIALVALIRLLWRKHSGDDHELP 435
G+ L+ LS + VL+ LV +R ++R GD
Sbjct: 260 GKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDG-RDT 318
Query: 436 ELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLL 495
E T + F + A+T+V +AV G+P +T++L + K++
Sbjct: 319 EEDAQ----TFLDHF--------------IIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 360
Query: 496 INHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVN-NDVASEINQAV 554
+ ++L+A TMG A+ IC D TG L N + V + IGE+ N DV + + V
Sbjct: 361 -KDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHV 419
Query: 555 LQALERGIG-ASVLVPEISLW--------PTTDWLVSWAKSRSLNVEFVDQNLSVLEHRK 605
L GI S + T L+ + + + V V++
Sbjct: 420 RNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYP 479
Query: 606 LSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGE-KRRFQ 664
+S K V+VK +GG G + +L C DS G++ I + K R
Sbjct: 480 FNSERKFMSVVVKHSGG----KYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCA 535
Query: 665 KLIKDMEDSGLRPIA-----FACGQTEVSEIKENGLHLLALAG----LREEIKSTVEALR 715
+I+ + LR I FA + + GL L+ + G LR ++ V+ +
Sbjct: 536 DVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQ 595
Query: 716 NAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 775
AG+ + +V+ D + +A G +A+EG++FR L E L + ++
Sbjct: 596 RAGITVRMVTGDNIDTAKAIARNCGILTF--GGLAMEGKEFRSLVYEEMDPILPKLRVLA 653
Query: 776 SCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI 835
DK LLV +K+ G VVA G T D PALK ADVG + TE+A+E SDI++
Sbjct: 654 RSSPLDKQLLVLMLKDMGEVVAV-TGDGTNDAPALKLADVGFSMGISGTEVAKEASDIIL 712
Query: 836 --SAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWV 893
S++ +K GR Y NI+KF + QLT +++T V + I SP+T++QL+WV
Sbjct: 713 LDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWV 772
Query: 894 YSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAG 953
IM L L + E + + P R L+ + MWK+ Q Q+ V I FAG
Sbjct: 773 NLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAG 832
Query: 954 ---------QVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMV 1004
I + + FN+F L Q+FN+ +A +L ++ V + K + +
Sbjct: 833 GSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTI 892
Query: 1005 FLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAV--LPWGI 1046
QV++VEF S L+ QW C +L + L +G+
Sbjct: 893 MGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGV 936
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 284 bits (729), Expect = 4e-81
Identities = 205/877 (23%), Positives = 368/877 (41%), Gaps = 92/877 (10%)
Query: 225 WNTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVF 284
N + R L+ + I+LLLVAA LS G D D IL+ V
Sbjct: 59 PNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWV----DAGVDAIVILLVVV 114
Query: 285 VLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRV 344
+ V +R + LE + + + + KV+R G+ I S L+ GD+V L GD V
Sbjct: 115 INALLGFVQEYRAEKALEALK--KMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVV 172
Query: 345 PGDGLVVNSDGLMLD------------------DVLNSEIDPDRNPFLFSGSKVMEGHGT 386
P D ++ S L +D ++ + DR+ LFSG+ V+ G
Sbjct: 173 PADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAK 232
Query: 387 MLLISVGGNIASGQVLRSNLS--LAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVG 444
++++ G G++ R + T L + + + + +G
Sbjct: 233 GIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLA------------LVLG 280
Query: 445 TVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSL-----FFWNDKLLINHH 499
++ + F S L AL + AV G+P V+T++L D ++
Sbjct: 281 ALVFVVGLFRGGNGLLESFLT-ALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV--- 336
Query: 500 AKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSK-FCIGEKDVNNDVASEINQAVLQAL 558
++L+A T+G VIC D TG L N++ V K + G +D + + A+L+ L
Sbjct: 337 ---RSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFL 393
Query: 559 ERGIGASVLVPEISLW-----PTTDWLVSWAKS--RSLNVEFVDQNLSVLEHRKLSSNNK 611
+ + PE + W PT LV +A+ SL++ ++ +L S K
Sbjct: 394 LAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERK 453
Query: 612 VCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDME 671
V+VK + G + G IL C + E + E R ++ +K++
Sbjct: 454 RMSVIVKTDEGKYILFV----KGAPEVILERCKSIGELEPLTEE---GLRTLEEAVKELA 506
Query: 672 DSGLRPIAFACG------QTEVSEIKENGLHLLALAG----LREEIKSTVEALRNAGVRI 721
GLR +A A + + + E+ L L L G RE++K +E LR AG+++
Sbjct: 507 SEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKV 566
Query: 722 ILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADD 781
+++ D + +A E G + + ++G + L+ E ++ +++ +
Sbjct: 567 WMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQ 626
Query: 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISA--VG 839
K +V+++++ GHVVA G D PALK ADVGI + T+ A+E +DIV+
Sbjct: 627 KARIVEALQKSGHVVAMT-GDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFA 685
Query: 840 SLLPILKLGRCAYCNIQKFTKLQLTGC-ASGLLITLVTTLILEESPITSIQLIWVYSIMY 898
+++ + GR Y NI+KF L+ L + + + L P+T +QL+W+ +
Sbjct: 686 TIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTD 745
Query: 899 MLGGLIMRMEFKDQEPVTNPPARRTKSLLD-KVMWKHTAVQVL----CQVGVFLIFQFAG 953
L L + +E + + + PP + L + K+ W+ + L + FL++
Sbjct: 746 SLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGF 805
Query: 954 QVIPGMNRDI---RKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLK--KFNVLMVFLIV 1008
+ F L Q+ A+R + L +L K+ L + +I+
Sbjct: 806 IANTLGLDLFQALLQTTAFTVLVLIQLLLTL-AVRSRGRPFLSSLLFSNKYLWLALLVII 864
Query: 1009 IAAQVLVVEFATSLAGYQ--RLNGMQWGICFILAVLP 1043
I +++ +L +Q L+ +W I +A+L
Sbjct: 865 ILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLL 901
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 2e-50
Identities = 211/843 (25%), Positives = 359/843 (42%), Gaps = 117/843 (13%)
Query: 239 FLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRA 298
FL + N ILLL+ +A +S G I+ D +I +A+ +++T V +R
Sbjct: 54 FLSQFVKNPLILLLIASAVISVFMGNID--------DAVSITLAILIVVTVGFVQEYRSE 105
Query: 299 RKLEKKQWEEKNKL---EVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDG 355
+ LE NKL E ++R G+ + + S L+ GD+V L+ GDRVP D +V +
Sbjct: 106 KSLE-----ALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD 160
Query: 356 LMLDDV-LNSEIDP-----------------DRNPFLFSGSKVMEGHGTMLLISVGGNIA 397
L +D+ L E P +R+ F G+ V GHG +++ G N
Sbjct: 161 LSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTE 220
Query: 398 SGQVLR--SNLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLL 455
G V + + T L + L+ G L G + V ++ F
Sbjct: 221 FGAVFKMMQAIEKPKTPLQKSMDLL--------GKQLSLVSF-GVIGVICLVGWF----- 266
Query: 456 KPQGK-----ISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGAT 510
QGK +I VS L V AI G+P ++TV+L ++ A + L + T
Sbjct: 267 --QGKDWLEMFTISVS-LAVAAIP--EGLPIIVTVTLALGVLRM-SKKRAIVRKLPSVET 320
Query: 511 MGIASVICIDVTGGLVCNRVDVSK-FCIGE----------------KDVNNDVASEINQA 553
+G +VIC D TG L N + V+K + + + A
Sbjct: 321 LGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVA 380
Query: 554 VLQALERGI---GASVLVPEISLW--PTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSS 608
V + LE G A +L PT L+ ++ + + + SS
Sbjct: 381 VSRILEAGNLCNNAKFRNEADTLLGNPTDVALI--ELLMKFGLDDLRETYIRVAEVPFSS 438
Query: 609 NNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRR-FQKLI 667
K V ++ D ++ M G +L C+YY +GK+ + ++R Q+
Sbjct: 439 ERKWMAVKC-VHRQDRSEMCFM--KGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEA 495
Query: 668 KDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIIL 723
+M +GLR IAFA G ++ L L L G+ R +K V L GVRII+
Sbjct: 496 AEMASAGLRVIAFASGP------EKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIM 549
Query: 724 VSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783
++ D +A LG S + GE+ ++ + + + + + K+
Sbjct: 550 ITGDSQETAVSIARRLGMPSKTSQSV--SGEKLDAMDDQQLSQIVPKVAVFARASPEHKM 607
Query: 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSL 841
+V++++++G VVA G D PALK AD+G+ T++A+E +D++++ ++
Sbjct: 608 KIVKALQKRGDVVAM-TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATI 666
Query: 842 LPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLG 901
L ++ G+ + NI+ F QL+ + L + + TL+ +P+ ++Q++W+ +M
Sbjct: 667 LSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPP 726
Query: 902 GLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLC-QVGVFLIF--QFAGQVIPG 958
+ +E D++ + PP R +L K + K V + VG +F + VI
Sbjct: 727 AQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQDGVITA 786
Query: 959 MNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVL---KKFNVLMVFLIVIAAQVLV 1015
RD MTF F +FN A R K+V + + FN + I Q+LV
Sbjct: 787 --RD--TTMTFTCFVFFDMFNAL-ACRSQTKSVFEIGFFSNRMFNYAV--GGSIIGQLLV 839
Query: 1016 VEF 1018
+ F
Sbjct: 840 IYF 842
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 129 bits (327), Expect = 3e-31
Identities = 128/609 (21%), Positives = 228/609 (37%), Gaps = 154/609 (25%)
Query: 296 RRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDG 355
R L + N V+R+G ++ I +L+ GDVV + G+ VP DG++++
Sbjct: 22 DILRSLSDRL---VNTRPATVLRNGWKE-IPAKDLVPGDVVLVKSGETVPADGVLLSGSC 77
Query: 356 L----MLD------------DVLNSEIDPDRNPFLFSGSKVMEGHGTMLLISVGGN---- 395
L + + I D +F+G+ V G +++ G
Sbjct: 78 FVDESNLTGESNPVLKTALKETQSGTITGDL---VFAGTYVFGGTLIVVVTPTGILTTVG 134
Query: 396 -----IASGQVLRSNLS-----LAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGT 445
+ +G R+ L L + I + L+ ++
Sbjct: 135 RIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLL---------------------ALAV 173
Query: 446 VMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNL 505
+ +F R ++L AL V+ I V +P +TV+L D L +NL
Sbjct: 174 FLYLFIRGWDPNSIFKALLR-ALIVLVIVVPPALPAAVTVAL-AVGDARLAKKGILVRNL 231
Query: 506 SAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNND---VASEINQAVLQALERGI 562
+A +G +C D TG L N++ + I +N VA + N +E+ +
Sbjct: 232 NALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNNYLSGDPMEKAL 291
Query: 563 GASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGG 622
+ A+ + ++ +L+ SS K V+V+
Sbjct: 292 ------------------LKSAELVGK-ADKGNKEYKILDVFPFSSVLKRMSVIVETP-- 330
Query: 623 DEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFAC 682
D + G IL C+ +++ ++ GLR +AFA
Sbjct: 331 --DGSDLLFVKGAPEFILERCN-----------------NYEEKYLELARQGLRVLAFAS 371
Query: 683 GQTEVSEIKENGLHLLALAG----LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACE 738
+ E+ L L L LR + K T+E L+ AG+++++++ D +L +A E
Sbjct: 372 KEL------EDDLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKE 425
Query: 739 LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAF 798
LG I + E KL +V+++++KGH+VA
Sbjct: 426 LG--------IDVFARVSPE----------------------QKLQIVEALQKKGHIVAM 455
Query: 799 FG-GSSTRDTPALKEADVGITEENKCTEMARECSDIVISA--VGSLLPILKLGRCAYCNI 855
G G D PALK+ADVGI A+ +DIV+ + +++ +K GR + NI
Sbjct: 456 TGDG--VNDAPALKKADVGIAMG------AKAAADIVLLDDDLSAIVKAVKEGRKIFSNI 507
Query: 856 QKFTKLQLT 864
+ +
Sbjct: 508 KSNIFWAIA 516
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 1e-30
Identities = 207/877 (23%), Positives = 352/877 (40%), Gaps = 172/877 (19%)
Query: 251 LLLVAAALSFVTGTIEQGPKDGWHDGAAIL--IAVFVLLTFPAVTNFRRARKLEK--KQW 306
+LL+AA +SFV E +G A + + ++L A+ + R EK +
Sbjct: 12 ILLLAACVSFVLAWFE----EGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEAL 67
Query: 307 EEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDD-VLNSE 365
+E KV+R GR +I +L+ GD+V LA GD+VP D V++ L +D +L E
Sbjct: 68 KEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGE 127
Query: 366 ----------------IDPDRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRS----- 404
++ D+ LFSG+ V+ G +++ G + G++
Sbjct: 128 SVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAE 187
Query: 405 ---------------NLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKI 449
LS + ++ LV +I + H D P L G G +
Sbjct: 188 QEDTPLQKKLDEFGELLSKVIGLICILVWVINI---GHFND----PALGG----GWIQGA 236
Query: 450 FERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGA 509
F KI++ AL V AI G+P VIT L K+ +A + L +
Sbjct: 237 IYYF------KIAV---ALAVAAIP--EGLPAVITTCLALGTRKM-AKKNAIVRKLPSVE 284
Query: 510 TMGIASVICIDVTGGLVCNRVDVSK-------------FCI--------GEKDVNNDVAS 548
T+G +VIC D TG L N++ V K FC+ G ++ +
Sbjct: 285 TLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVA 344
Query: 549 EINQAVL--------------------QALERGIGAS------VLVPEISLWPTTDWLVS 582
A L + + +G + VLV ++ L P T VS
Sbjct: 345 GGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGL-PATKNGVS 403
Query: 583 WAKSRSLNVEFVDQN----LSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTAST 638
+ +L V + L+ LE S + K VL K + G++ + G
Sbjct: 404 SKRRPALGCNSVWNDKFKKLATLE---FSRDRKSMSVLCKPSTGNK-----LFVKGAPEG 455
Query: 639 ILNMCSYYYDSEGKSFEIKGE-KRRFQKLIKDM-EDSGLRPIAFA---CGQ--------- 684
+L C++ + +G++ + + K +IK+M LR +A A
Sbjct: 456 VLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSD 515
Query: 685 TEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG 740
E E+ L + + G+ R E+ +E R AG+R+I+++ D + +G
Sbjct: 516 PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIG 575
Query: 741 NFRP--ESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAF 798
F P + + G +F E+ ++ A S L K LV+ ++E+G +VA
Sbjct: 576 IFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVA- 634
Query: 799 FGGSSTRDTPALKEADVGITEENKCTEMARECSDIV---------ISAVGSLLPILKLGR 849
G D PALK+AD+GI + TE+A+E SD+V ++AV GR
Sbjct: 635 MTGDGVNDAPALKKADIGIAMGSG-TEVAKEASDMVLADDNFATIVAAVEE-------GR 686
Query: 850 CAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEF 909
Y N+++F + ++ ++ +T + + +QL+WV + L +
Sbjct: 687 AIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNP 746
Query: 910 KDQEPVTNPPARRTKSLLDK-VMWKHTAVQV---LCQVGVFLIFQFAGQVIPGMNRDIRK 965
D++ + PP R + L+ + +++ V V L VG F ++ + G + D
Sbjct: 747 PDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGF-VWWYLLTHFTGCDEDSFT 805
Query: 966 AMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVL 1002
C VF R + +VL VV++ FN L
Sbjct: 806 TCPDFEDPDCYVFEGKQPARTISLSVL-VVIEMFNAL 841
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 1e-25
Identities = 176/820 (21%), Positives = 317/820 (38%), Gaps = 150/820 (18%)
Query: 182 DRIVKARNLNLLKEIGGP-EKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFF 237
VK + NLLKE E + G H E G+ ++ + N
Sbjct: 2 KLHVKKQGNNLLKESQMGKETLLRKLGVH-ETGLTNVEVTERLAEFGPNQTVEEKKVPNL 60
Query: 238 LFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRR 297
L++A NN I +L + +S++T +E A ++IA+ VL + + F +
Sbjct: 61 RLLIRAFNNPFIYILAMLMGVSYLTDDLE----------ATVIIALMVLAS--GLLGFIQ 108
Query: 298 ARKLEKKQWEEKN--KLEVKVVRSGRE------QLIAVSNLLKGDVVRLAKGDRVPGDGL 349
+ E+ + KN K V+R E + + L+ GD++ LA GD +P D
Sbjct: 109 ESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADAR 168
Query: 350 VVNSDGLMLDD-VLNSEIDP-----------DRNPF-----LFSGSKVMEGHGTMLLISV 392
V+++ L ++ L E P D F G+ V+ GH ++++
Sbjct: 169 VISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLAT 228
Query: 393 GGNIASGQVLRSNLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFER 452
G + G L++A T + KG V +V K+ R
Sbjct: 229 GSSTWFGS-----LAIAAT-----------------ERRGQTAFDKG---VKSVSKLLIR 263
Query: 453 FLL---------KPQGKISILVSALTVVAIAV---QHGMPFVITVSLFFWNDKLLINHHA 500
F+L K L + L +A+AV +P +++ +L K IN
Sbjct: 264 FMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNL----AKGAINMSK 319
Query: 501 KP---QNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQ- 556
K + LSA G ++C D TG L +++++ K D + E ++ VL+
Sbjct: 320 KKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI--------DSSGETSERVLKM 371
Query: 557 -------------ALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEH 603
L+ + A + + S T W K + +F + LSV+
Sbjct: 372 AWLNSYFQTGWKNVLDHAVLAKL---DESAARQTA--SRWKKVDEIPFDFDRRRLSVVVE 426
Query: 604 RKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRF 663
+ +C G +L +C++ + EK
Sbjct: 427 NRAEVTRLIC-------------------KGAVEEMLTVCTHKRFGGAVVTLSESEKSEL 467
Query: 664 QKLIKDMEDSGLRPIAFACGQTEVSE-----IKENGLHLLALAGLREEIKST----VEAL 714
Q + +M G+R IA A +V E E L + G + K + + AL
Sbjct: 468 QDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAAL 527
Query: 715 RNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM 774
G+ + +++ D + + E+G ++ND L G EL+ E +L +
Sbjct: 528 FKNGINVKVLTGDNEIVTARICQEVG---IDANDF-LLGADIEELSDEELARELRKYHIF 583
Query: 775 GSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIV 834
K ++ +K+ GH V F G D PAL++ADVGI+ + ++A+E SDI+
Sbjct: 584 ARLTPMQKSRIIGLLKKAGHTVGFLG-DGINDAPALRKADVGISVDT-AADIAKEASDII 641
Query: 835 I--SAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIW 892
+ ++ L + GR + NI K+ K+ + + LV + + P+ S+ L+
Sbjct: 642 LLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLL- 700
Query: 893 VYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMW 932
+ +++Y L + + D+E + P K + ++
Sbjct: 701 IQNLLYDFSQLTLPWDKMDREFLKKPHQWEQKGMGRFMLC 740
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 85.7 bits (213), Expect = 4e-19
Identities = 40/177 (22%), Positives = 82/177 (46%), Gaps = 7/177 (3%)
Query: 882 ESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLC 941
P+T IQ++W+ + L L + E + + + PP + + L + + + +Q L
Sbjct: 1 PLPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLL 60
Query: 942 QVGVFLIFQFAGQVIPGMN-RDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFN 1000
V L+ F G + G++ + + M FN+ L Q+FN R L++++ + L N
Sbjct: 61 IAIVTLLVFFLGLLGFGISESGLAQTMAFNTLVLSQLFNAL-NARSLRRSLFKIGLFS-N 118
Query: 1001 VLMV--FLIVIAAQVLVVE--FATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFI 1053
L++ L+ + Q+L++ ++ G L+ QW I LA++ + +
Sbjct: 119 KLLLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELRKLL 175
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 1e-18
Identities = 140/604 (23%), Positives = 219/604 (36%), Gaps = 118/604 (19%)
Query: 273 WHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKL--EVKVVRSGREQLIAVSNL 330
W D IL LL A F K K L + +V+R G+ Q I S L
Sbjct: 55 WVDFVIILG----LLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASEL 110
Query: 331 LKGDVVRLAKGDRVPGDGLVVNSDGLMLDD-VLNSEIDP-----DRNPFLFSGSKVMEGH 384
+ GDVVRL GD VP D + D + +D L E P + SGS V +G
Sbjct: 111 VPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAY--SGSTVKQGE 168
Query: 385 GTMLLISVGGNIASG----------------QVLRSNLSLAVTVLIALVALIRLL--WRK 426
++ + G N G Q + S + L + VLI ++ LI L+ +
Sbjct: 169 AEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFG 228
Query: 427 HSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVS 486
E +F L L V I + MP V++V+
Sbjct: 229 RGESFRE----------------GLQFAL-----------VLLVGGIPI--AMPAVLSVT 259
Query: 487 LFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCI-GEKDVNND 545
+ +L A L+A + ++C D TG L N++ + + +D
Sbjct: 260 MAVGAAEL-AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDD 318
Query: 546 VASEINQAVLQALERG---IGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLE 602
V + A L + E I +VL L A+ +EFV + V +
Sbjct: 319 V---LLYAALASREEDQDAIDTAVLGSAKDL--------KEARDGYKVLEFVPFD-PVDK 366
Query: 603 HRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRR 662
+ + + G K+ G IL++C + E
Sbjct: 367 RTEATVEDPETGKRFKVT------------KGAPQVILDLC-DNKKEIEEKVE------- 406
Query: 663 FQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAG 718
+ + ++ G R + A +E H L L L R + K T+E R+ G
Sbjct: 407 --EKVDELASRGYRALGVA------RTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLG 458
Query: 719 VRIILVSEDELLAVTEVACELG---NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 775
V + +V+ D L E A LG N + + E + D +
Sbjct: 459 VEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGLGEMVEDADGFAEV- 517
Query: 776 SCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI 835
+ K +V+ ++++GH+V G D PALK+ADVGI T+ AR +DIV+
Sbjct: 518 --FPEHKYEIVEILQKRGHLVGM-TGDGVNDAPALKKADVGIAVAG-ATDAARSAADIVL 573
Query: 836 SAVG 839
+ G
Sbjct: 574 TEPG 577
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 5e-18
Identities = 53/252 (21%), Positives = 88/252 (34%), Gaps = 56/252 (22%)
Query: 279 ILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRL 338
I++ + ++ RARK K + V+R G+E+ I L+ GD+V L
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLL 60
Query: 339 AKGDRVPGDGLVVNSDGLMLDDVLNSEIDP---DRNPFLFSGSKVMEGHGTMLLISVGGN 395
GDRVP DG ++ + + L E P R +F+G+ V+ G +++ + G +
Sbjct: 61 KPGDRVPADGRIIEGSLEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 396 IASGQVLRS--------------------NLSLAVTVLIALVALIRLLWRKHSGDDHELP 435
G++ R L V L LV LI
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFFRG---------- 170
Query: 436 ELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLL 495
+ L+ AL V+ A +P + ++L +L
Sbjct: 171 ----------------------GDFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLA 208
Query: 496 INHHAKPQNLSA 507
+NLSA
Sbjct: 209 -KKGILVKNLSA 219
|
Length = 222 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 80.4 bits (198), Expect = 3e-15
Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 42/324 (12%)
Query: 634 GTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDME---DSGLRPIAFAC-------- 682
G I+ CS +G + R + +I +ME GLR +AFA
Sbjct: 558 GAFERIIECCSSSNGKDGVKISPLEDCDR-ELIIANMESLAAEGLRVLAFASKSFDKADN 616
Query: 683 ------GQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAV 732
+T E+ L L L G+ R E VE AG+ + +++ D
Sbjct: 617 NDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETA 676
Query: 733 TEVACELG----NFRPESNDI----ALEGEQFRELNSTERMAKLDSMTL-MGSCLADDKL 783
+A E+G NF + ++I + G QF L S E + L ++ L + C K+
Sbjct: 677 KAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL-SDEEVDDLKALCLVIARCAPQTKV 735
Query: 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSL 841
+++++ + A G D+P+LK A+VGI +++A++ SDIV+S S+
Sbjct: 736 KMIEALHRRKAFCAM-TGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASI 794
Query: 842 LPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEES------PITSIQLIWVYS 895
L ++ GR + NI KF L L I L+ L + P++ ++++W
Sbjct: 795 LNAIEEGRRMFDNIMKFV-LHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIM 853
Query: 896 IMYMLGGLIMRMEFKDQEPVTNPP 919
I + + +E + + P
Sbjct: 854 ITSCFPAMGLGLEKAAPDLMDRLP 877
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 3e-11
Identities = 157/734 (21%), Positives = 288/734 (39%), Gaps = 173/734 (23%)
Query: 250 LLLLVAAALSFVTGTIEQGPKDGWHDGA---AILIAVFVLLTFPAVTNFRRARKLEKKQW 306
+LL + A L F+ I+ ++ + ++++ V++T ++ + K K
Sbjct: 76 MLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIIT--GCFSYYQEAKSSKIME 133
Query: 307 EEKNKL--EVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDD-VLN 363
KN + + V+R G + I ++ GD+V + GDR+P D ++++ G +D+ L
Sbjct: 134 SFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLT 193
Query: 364 SEIDPD--------------RNPFLFSGSKVMEGHGTMLLISVGGNIASGQV--LRSNLS 407
E +P RN FS + V EG ++++ G G++ L S L
Sbjct: 194 GESEPQTRSPEFTHENPLETRNIAFFSTNCV-EGTARGIVVNTGDRTVMGRIASLASGLE 252
Query: 408 LAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIF---ERFLLKPQGKISIL 464
T IA+ E++ + + T + +F F+L + L
Sbjct: 253 NGKTP-IAI-------------------EIEHFIHIITGVAVFLGVSFFILSLILGYTWL 292
Query: 465 VSALTVVAIAVQH---GMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDV 521
+ + ++ I V + G+ +TV L K + + +NL A T+G S IC D
Sbjct: 293 EAVIFLIGIIVANVPEGLLATVTVCLTL-TAKRMARKNCLVKNLEAVETLGSTSTICSDK 351
Query: 522 TGGLVCNRVDVSKFC----IGEKDVNND------------------VASEINQAVLQALE 559
TG L NR+ V+ I E D D +A N+AV +A +
Sbjct: 352 TGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411
Query: 560 RGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNL-SVLEHRKLSSNNKVCGV--- 615
+ P V+ S S ++ ++ L SV+E R+ N KV +
Sbjct: 412 ENV------------PILKRAVAGDASESALLKCIELCLGSVMEMRE--RNPKVVEIPFN 457
Query: 616 -----LVKI----NGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKL 666
+ I + D ++ M G IL CS S I G+++ +
Sbjct: 458 STNKYQLSIHENEDPRDPRHLLVM--KGAPERILERCS--------SILIHGKEQPLDEE 507
Query: 667 IKD------MEDSGL----------------RPIAFACGQTEVSEIKENGLHLLALAGL- 703
+K+ +E GL P F +V+ +N L GL
Sbjct: 508 LKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDN----LCFVGLI 563
Query: 704 ------REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESN----DIA--- 750
R + V R+AG+++I+V+ D + +A +G E N DIA
Sbjct: 564 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG-IISEGNETVEDIAARL 622
Query: 751 ----------------LEGEQFRELNSTERMAKLDSMTLM--GSCLADDKLLLVQSVKEK 792
+ G +++ S + L T + KL++V+ + +
Sbjct: 623 NIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ 682
Query: 793 GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRC 850
G +VA G D+PALK+AD+G+ ++++++ +D+++ S++ ++ GR
Sbjct: 683 GAIVA-VTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRL 741
Query: 851 AYCNIQKFTKLQLT 864
+ N++K LT
Sbjct: 742 IFDNLKKSIAYTLT 755
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 65.3 bits (160), Expect = 1e-10
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 48/199 (24%)
Query: 663 FQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALA-GLREEIKSTVEALRNAGVRI 721
+ I+ +E G + A V ++ALA LR + K + AL+ G+++
Sbjct: 505 LSERIEALESEGKTVVFVAVDGKLVG--------VIALADELRPDAKEAIAALKALGIKV 556
Query: 722 ILVSEDELLAVTEVACELG--NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 779
++++ D +A ELG R E L
Sbjct: 557 VMLTGDNRRTAEAIAKELGIDEVRAE-------------------------------LLP 585
Query: 780 DDKLLLVQSVKEKGHVVAFFG-GSSTRDTPALKEADVGITEENKCTEMARECSDIVI--S 836
+DK +V+ ++ +G VA G G + D PAL ADVGI T++A E +D+V+
Sbjct: 586 EDKAEIVRELQAEGRKVAMVGDGIN--DAPALAAADVGIA-MGSGTDVAIEAADVVLMRD 642
Query: 837 AVGSLLPILKLGRCAYCNI 855
+ ++ + L R I
Sbjct: 643 DLSAVPEAIDLSRATRRII 661
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 1e-08
Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 36/178 (20%)
Query: 683 GQTEVSEIKENGLHLLALA---GLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL 739
G T + NG LA L+ E K ++AL+ G+ ++++ D VA EL
Sbjct: 392 GGTTSVLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL 451
Query: 740 GNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFF 799
G + L DDK L++ ++EKG VVA
Sbjct: 452 G-----------------------------IENVRAEVLPDDKAALIKKLQEKGKVVAMV 482
Query: 800 GGSSTRDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNI 855
G D PAL +ADVGI T++A E +D+V+ + + + + L R I
Sbjct: 483 -GDGINDAPALAQADVGIA-IGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRI 538
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 2e-08
Identities = 142/735 (19%), Positives = 256/735 (34%), Gaps = 199/735 (27%)
Query: 314 VKVVRSGREQLIAVSNLLKGDVVRLAK--GDRVPGDGLVVNSDGLMLDDVLNSE------ 365
V V+R+G+ IA L+ GD+V + + +P D ++++ ++ + +L E
Sbjct: 231 VIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCIVNESMLTGESVPVLK 290
Query: 366 ------IDPDRNPF---------LFSGSKVMEG----HGTMLLISV---GGNIASGQVLR 403
D D + F LF G+K+++ T L V G + + GQ++R
Sbjct: 291 FPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVR 350
Query: 404 SNL------------SLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFE 451
S L S + +A++ALI G + I E
Sbjct: 351 SILYPKPRVFKFYKDSFKFILFLAVLALI-----------------------GFIYTIIE 387
Query: 452 RFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAK-------PQN 504
+ + I++ +L ++ I V +P +++ + +L K P
Sbjct: 388 -LIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARL-----KKKGIFCTSPFR 441
Query: 505 LSAGATMGIASVICIDVTGGLVCNRVDVSKFCIG--------EKDVNNDVASEINQ---- 552
++ G V C D TG L + +D+ + K V D + + +
Sbjct: 442 IN---FAGKIDVCCFDKTGTLTEDGLDLR--GVQGLSGNQEFLKIVTEDSSLKPSITHKA 496
Query: 553 -AVLQALERGIGASVLVP-EISLWPTTDWLVSWAK------SRSLNVEFVD--QNLSVLE 602
A +L + G V P + ++ T W + S V D Q LS++
Sbjct: 497 LATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIR 556
Query: 603 HRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRR 662
+ SS + V+V N DE G TI ++CS
Sbjct: 557 RFQFSSALQRMSVIVSTN--DERSPD-AFVKGAPETIQSLCSPETVPS-----------D 602
Query: 663 FQKLIKDMEDSGLRPIAFA---CGQTEVSEIK-------ENGLHLLALA----GLREEIK 708
+Q+++K G R +A A + + + + E+ L L L+ + K
Sbjct: 603 YQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTK 662
Query: 709 STVEALRNAGVRIILVSEDELLAVTEVACELG---------------------------- 740
++ L+ A +R ++++ D L VA E G
Sbjct: 663 EVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEV 722
Query: 741 ----------NFRP-------------ESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 777
P +A+ G+ F L + L + +
Sbjct: 723 IDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPEL-LLRLLSHTTV 781
Query: 778 LA----DDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI 833
A D K LV+ +++ + V G D ALK+ADVGI+ +A +
Sbjct: 782 FARMAPDQKETLVELLQKLDYTVGMC-GDGANDCGALKQADVGISLSEAEASVAAPFTSK 840
Query: 834 V--ISAVGSLLPILKLGRCAYCN-IQKFTKLQLTGCASGLLITLVTTLILEESPITSIQL 890
+ IS V +++ GRCA Q F + L + + V+ L L S + Q
Sbjct: 841 LASISCV---PNVIREGRCALVTSFQMFKYMAL--YSLIQFYS-VSILYLIGSNLGDGQF 894
Query: 891 IWVYSIMYMLGGLIM 905
+ + ++ L+M
Sbjct: 895 LTIDLLLIFPVALLM 909
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 1e-07
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 17/212 (8%)
Query: 634 GTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFAC-----GQTEVS 688
G ILN+CS + RR +++ + GLR +A A + +
Sbjct: 473 GALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQ 532
Query: 689 EIKENGLHLLA-LAGL---REEIKSTVEALRNAGVRI-ILVSEDELLAVTEVACELGNFR 743
E+ L L +A L +E ++AL+ +GV + IL + EL+A +V E+G
Sbjct: 533 RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVA-AKVCHEVG--- 588
Query: 744 PESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSS 803
L G L+ E + TL K +V +K +GHVV F G
Sbjct: 589 -LDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMG-DG 646
Query: 804 TRDTPALKEADVGITEENKCTEMARECSDIVI 835
D PAL+ AD+GI+ + ++ARE +DI++
Sbjct: 647 INDAPALRAADIGISVDG-AVDIAREAADIIL 677
|
Length = 902 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 1e-07
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 34/135 (25%)
Query: 703 LREEIKSTVEALRNAGV-RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNS 761
LR E K + AL+ AG ++++++ D A VA ELG ++
Sbjct: 385 LRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGI------------DEVH---- 428
Query: 762 TERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFG-GSSTRDTPALKEADVGITEE 820
L +DKL +V+ ++E+G VVA G G D PAL ADVGI
Sbjct: 429 -------------AELLPEDKLAIVKELQEEGGVVAMVGDG--INDAPALAAADVGIA-M 472
Query: 821 NKCTEMARECSDIVI 835
+++A E +DIV+
Sbjct: 473 GAGSDVAIEAADIVL 487
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 3e-06
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 33/150 (22%)
Query: 703 LREEIKSTVEALRNAGV-RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNS 761
R + + L+ G+ ++++++ D VA ELG ++
Sbjct: 363 PRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI------------DEVH---- 406
Query: 762 TERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEEN 821
L +DKL +V+ ++EK VA G D PAL ADVGI
Sbjct: 407 -------------AELLPEDKLEIVKELREKYGPVAMVG-DGINDAPALAAADVGIAMGA 452
Query: 822 KCTEMARECSDIVI--SAVGSLLPILKLGR 849
+++A E +D+V+ + L ++L R
Sbjct: 453 SGSDVAIETADVVLLNDDLSRLPQAIRLAR 482
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 2e-04
Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 197 GGPEKVASAFGSHLEHGIQGDQLPQPQI---WNTIKPNHAREFFLFLLKASNNFNILLLL 253
E+V + G+ LE G+ + + N + + + L+ + +++LL
Sbjct: 4 LSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIILL 63
Query: 254 VAAALS 259
+AA +S
Sbjct: 64 IAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 4e-04
Identities = 56/265 (21%), Positives = 100/265 (37%), Gaps = 70/265 (26%)
Query: 610 NKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDS-EGKSFEIKGEKRRFQKLIK 668
N+ + + G E+++ + S ++ EG+S +K + L +
Sbjct: 314 NRQASEFIPVPGVSEEELADAAQ---------LASLADETPEGRSIVELAKKLGIE-LRE 363
Query: 669 DMEDSGLRPIAFACGQTEVSEIKENGLHLL---ALAGLREEIKST-------VEAL---- 714
D S + F QT +S + G + A+ +R ++ ++A
Sbjct: 364 DDLQSHAEFVPFT-AQTRMSGVDLPGGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEV 422
Query: 715 -RNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEG--EQFRELNSTERMAKLDSM 771
R G +++V +L V + DI G E+F EL K+
Sbjct: 423 SRLGGTPLVVVENGRILGVIYL-----------KDIVKPGIKERFAELR------KMGIK 465
Query: 772 TLM----------------------GSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPA 809
T+M +DKL L++ + +G +VA G T D PA
Sbjct: 466 TVMITGDNPLTAAAIAAEAGVDDFIAEATPEDKLALIRQEQAEGRLVAMTG-DGTNDAPA 524
Query: 810 LKEADVGITEENKCTEMARECSDIV 834
L +ADVG+ N T+ A+E +++V
Sbjct: 525 LAQADVGVA-MNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 9e-04
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 31/128 (24%)
Query: 707 IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMA 766
IK LR G++ I+++ D L +A E G
Sbjct: 451 IKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG-------------------------- 484
Query: 767 KLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEM 826
+D + +DK+ L++ + +G +VA G T D PAL +ADVG+ N T+
Sbjct: 485 -VDD--FIAEATPEDKIALIRQEQAEGKLVAM-TGDGTNDAPALAQADVGVA-MNSGTQA 539
Query: 827 ARECSDIV 834
A+E +++V
Sbjct: 540 AKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 0.001
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 37/202 (18%)
Query: 226 NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAI--LIAV 283
N ++ + + LL N ++L++AAA+SF W +G I +IA+
Sbjct: 42 NRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAM--------HDWIEGGVISAIIAL 93
Query: 284 FVLLTFPAVTNFRRARKLEKKQWEEKN--KLEVKVVRSGREQLIAVSNLLKGDVVRLAKG 341
+L+ F + K EK KN V+R+G+ I +L+ GD+ L G
Sbjct: 94 NILI------GFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTG 147
Query: 342 DRVPGDGLVVNSDGLMLDD-VLNSEIDP------------------DRNPFLFSGSKVME 382
D +P D ++ + D+ +L E P DR FS S V +
Sbjct: 148 DTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTK 207
Query: 383 GHGTMLLISVGGNIASGQVLRS 404
G + I+ N G +
Sbjct: 208 GRAKGICIATALNSEIGAIAAG 229
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 0.001
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Query: 229 KPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGA-AILIAVFV-- 285
KP HA + LL+A NN I +L+V AA+SF T + D I+I V
Sbjct: 67 KPPHA---LVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLL 123
Query: 286 --LLTFPAVTNFRRARKLEKKQWEEKNKLEV----KVVRSGREQLIAVSNLLKGDVVRLA 339
LL F FR + E + + V + I + L+ GD+V L+
Sbjct: 124 SGLLRF--WQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLS 181
Query: 340 KGDRVPGD 347
GD +P D
Sbjct: 182 AGDMIPAD 189
|
Length = 903 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 0.002
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 279 ILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRS-GREQLIAVSNLLKGDVVR 337
IL+ V F R + + + +++ + ++ G ++I S+L KG +VR
Sbjct: 71 ILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVR 130
Query: 338 LAKGDRVPGDGLVVNSDGLMLDDVLNSEIDP 368
+A G+++P DG V+ + + + E P
Sbjct: 131 VATGEQIPNDGKVIKGLATVDESAITGESAP 161
|
Length = 673 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 0.004
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 316 VVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVN 352
V G E+ + V + GD+V + G+R+P DG+VV+
Sbjct: 216 VRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252
|
Length = 713 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 36.8 bits (86), Expect = 0.004
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 13/72 (18%)
Query: 199 PEKVASAFGSHLEHGIQGDQLPQPQI--------WNTIKPNHAREFFLFLLKASNNFNIL 250
E+V + LE G L + N + P L L+ +N I
Sbjct: 9 LEEVLERLQTDLEKG-----LSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIY 63
Query: 251 LLLVAAALSFVT 262
+LL AA LS +
Sbjct: 64 ILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1108 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.96 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.88 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.87 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.81 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.53 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.42 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 98.89 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.75 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 98.68 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.61 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.6 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.57 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.55 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.52 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.5 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.49 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.49 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.47 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.44 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.43 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.43 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.42 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.33 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.29 | |
| PLN02887 | 580 | hydrolase family protein | 98.29 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.24 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.16 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.15 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.13 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.13 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.11 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.11 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.01 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 97.99 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.9 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.9 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.87 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.67 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.66 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.66 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.65 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.58 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.57 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.54 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.49 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.48 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.47 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.42 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.34 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.15 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.06 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.99 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 96.94 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.9 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 96.89 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 96.83 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.74 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.66 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.23 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.2 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.16 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.13 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.11 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.06 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.01 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 95.97 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 95.92 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.86 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.86 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 95.79 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 95.79 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.65 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 95.65 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 95.41 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.28 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 95.14 | |
| PLN02580 | 384 | trehalose-phosphatase | 94.95 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 94.93 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 94.88 | |
| PRK06769 | 173 | hypothetical protein; Validated | 94.85 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 94.67 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.67 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 94.58 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 94.51 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 94.36 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.07 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 93.96 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 93.95 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 93.93 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 93.91 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 93.86 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 93.74 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 93.64 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.6 | |
| PLN02940 | 382 | riboflavin kinase | 93.4 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 93.39 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 93.25 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.11 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 92.7 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 92.64 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 91.88 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 91.81 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 91.24 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 90.63 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 90.55 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 90.19 | |
| PLN02811 | 220 | hydrolase | 89.15 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 89.0 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 88.71 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 88.62 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 88.6 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 88.11 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 87.95 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 87.74 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 87.39 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 86.2 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 85.93 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 85.87 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 85.42 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 83.17 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 82.73 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 82.64 | |
| PLN03017 | 366 | trehalose-phosphatase | 82.13 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 81.73 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 81.22 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-187 Score=1615.01 Aligned_cols=863 Identities=33% Similarity=0.552 Sum_probs=817.2
Q ss_pred CCCHHHHHHHhhhcChhHHHhhCCHHHHHHHhCCCCCCCCCh--hhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHH
Q 043360 175 RILPDLLDRIVKARNLNLLKEIGGPEKVASAFGSHLEHGIQG--DQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNI 249 (1108)
Q Consensus 175 ~~~~~~l~~~~~~~~~~~l~~~gg~~~l~~~L~t~~~~GLs~--~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~ 249 (1108)
++++|+|.+|++++|++.|+.+||++|||+.|+||+..||+. +|+.+|++. |.+|++++|+||+++||+|+|.++
T Consensus 79 ~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TL 158 (1034)
T KOG0204|consen 79 GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTL 158 (1034)
T ss_pred ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchH
Confidence 678899999999999999999999999999999999999997 568888888 999999999999999999999999
Q ss_pred HHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccc
Q 043360 250 LLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSN 329 (1108)
Q Consensus 250 i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~d 329 (1108)
++|.+||++|+.+|++.++.+++|+||++|+++++++++++|++||+|++||++|+ +++.+.++.|+|||+.++|+..|
T Consensus 159 iIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~-~~k~~~k~~ViR~G~r~~isI~d 237 (1034)
T KOG0204|consen 159 IILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQ-KEKRNIKFQVIRGGRRQQISIYD 237 (1034)
T ss_pred HHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhh-hhhhceEEEEEECCEEEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred cccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC-----CCCCeeeecceEeeceEEEEEEEeccccHHHHHHH
Q 043360 330 LLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP-----DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLR 403 (1108)
Q Consensus 330 LvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p-----~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~ 403 (1108)
||||||+.|+.||++||||++++|++|.|||| |||||++ +.+|+|++||++++|.++|+|+++|.||+||+++.
T Consensus 238 iVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~ 317 (1034)
T KOG0204|consen 238 LVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMT 317 (1034)
T ss_pred eeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHH
Confidence 99999999999999999999999999999999 9999999 68999999999999999999999999999999998
Q ss_pred HH-----------------------HHHHHHHHHHHHHHHHHHHhccCCCCCCC--ccccccccccchhhhhhhhccCcc
Q 043360 404 SN-----------------------LSLAVTVLIALVALIRLLWRKHSGDDHEL--PELKGNVSVGTVMKIFERFLLKPQ 458 (1108)
Q Consensus 404 ~~-----------------------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~ 458 (1108)
.+ +++.++++++++++++|+.+... .++. ..|... ..+
T Consensus 318 ~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~--~~~~~~~~~~~~---------------~~~ 380 (1034)
T KOG0204|consen 318 LLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTK--IEGGTGTTWSDE---------------YIQ 380 (1034)
T ss_pred hhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeee--cCCCCCccccHH---------------HHH
Confidence 88 78889999999999999988763 3333 233221 234
Q ss_pred cHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEEC
Q 043360 459 GKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIG 538 (1108)
Q Consensus 459 ~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~ 538 (1108)
.++++|..+++++|+|||||||+|||++++|+++|| ++++++||+++|||+||++++||+|||||||+|+|+|++.|++
T Consensus 381 ~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkM-mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~ 459 (1034)
T KOG0204|consen 381 EFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKM-MKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIG 459 (1034)
T ss_pred HHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHH-hcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeec
Confidence 788999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred CcccCCCcc--hhhhHHHHHHHHHHhcc----ccc-------ccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeec
Q 043360 539 EKDVNNDVA--SEINQAVLQALERGIGA----SVL-------VPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRK 605 (1108)
Q Consensus 539 ~~~~~~~~~--~~~~~~~~~~l~~~~~~----~~~-------~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~ 605 (1108)
++.+..+.. ..+++.+.+++.+++.- ++. .+++.|||+|+||+.|+.++|.+++..|.+.++++++|
T Consensus 460 ~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~ 539 (1034)
T KOG0204|consen 460 SEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYP 539 (1034)
T ss_pred cccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEec
Confidence 988774332 36889999999999981 111 45789999999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEec
Q 043360 606 LSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQ 684 (1108)
Q Consensus 606 F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~ 684 (1108)
|||+||+|+|+++.++++. | +|||||+|+||++|+++++.+|+.+++ ++.+..+++.++.||++||||+|+|||+
T Consensus 540 FNS~kK~~gvvi~~~~~~~---y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~d 615 (1034)
T KOG0204|consen 540 FNSVKKRMGVVIKLPDGGH---Y-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRD 615 (1034)
T ss_pred cCcccceeeEEEEcCCCCe---E-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeec
Confidence 9999999999999888863 5 999999999999999999999999999 8889999999999999999999999999
Q ss_pred Cc----------chhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccc
Q 043360 685 TE----------VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIA 750 (1108)
Q Consensus 685 l~----------~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~v 750 (1108)
+. .++.++.+|+++|++|| ||||+++|+.|++|||+|+|+||||..||++||.+|||++++...++
T Consensus 616 f~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~ 695 (1034)
T KOG0204|consen 616 FVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLA 695 (1034)
T ss_pred cccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccce
Confidence 53 23567899999999999 99999999999999999999999999999999999999999777799
Q ss_pred cchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhc
Q 043360 751 LEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAREC 830 (1108)
Q Consensus 751 i~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~a 830 (1108)
++|++|++++++++++++++++|+||++|.||+.+|+.|+++|++||++|| |+||+||||+||||+|||+.|||+|||+
T Consensus 696 lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGD-GTNDaPALkeADVGlAMGIaGTeVAKEa 774 (1034)
T KOG0204|consen 696 LEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGD-GTNDAPALKEADVGLAMGIAGTEVAKEA 774 (1034)
T ss_pred ecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecC-CCCCchhhhhcccchhccccchhhhhhh
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred cchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcc
Q 043360 831 SDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRME 908 (1108)
Q Consensus 831 ADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e 908 (1108)
|||||+ ||++|+++++|||++|+||+||+||||+.|+++++++|++++..+.+||+++||||+|+|||++++||||+|
T Consensus 775 SDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATe 854 (1034)
T KOG0204|consen 775 SDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATE 854 (1034)
T ss_pred CCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC------ccccchhhhHHHHHHHHHHHhh
Q 043360 909 FKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMN------RDIRKAMTFNSFTLCQVFNQFD 982 (1108)
Q Consensus 909 ~~~~~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~T~~F~~~v~~q~~~~~~ 982 (1108)
||++++|+|+|++|++++|++.||+++++|++||++++|++.|.|..+|+.+ ...++|++||+||+||+||++|
T Consensus 855 pPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEin 934 (1034)
T KOG0204|consen 855 PPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEIN 934 (1034)
T ss_pred CCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999888542 4567899999999999999999
Q ss_pred hhhcccccccccccchhHHHHHHHHHHHHHHHHHHHhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 043360 983 AMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSFLDRS 1061 (1108)
Q Consensus 983 ~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~~v~~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~~~~~ 1061 (1108)
+|+++++|+|+++++|++|+.++..++++|+++++|++.+|++++|++.+|++|+++++++|++++++|.+|....+..
T Consensus 935 aRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~ 1013 (1034)
T KOG0204|consen 935 ARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKL 1013 (1034)
T ss_pred hcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998765543
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-145 Score=1262.01 Aligned_cols=825 Identities=22% Similarity=0.346 Sum_probs=724.5
Q ss_pred CCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCc
Q 043360 197 GGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGW 273 (1108)
Q Consensus 197 gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~ 273 (1108)
..+++.++.|+||+++||+.+|+.+|++. |+++..+++++|+.+++||.+++..+|+++|++|+++. .|
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~--------~~ 78 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA--------DF 78 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------hc
Confidence 46899999999999999999999999999 99999999999999999999999999999999999998 48
Q ss_pred chhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEec
Q 043360 274 HDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNS 353 (1108)
Q Consensus 274 ~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g 353 (1108)
.|++.|.+++++++.+..+++|+.++.+++|+ +..+..++|+|+|+.+.++++||||||||.|+.||+||||.+|++.
T Consensus 79 ~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk--~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~ 156 (972)
T KOG0202|consen 79 DEPFVITLIIVINVTVGFVQEYNAEKALEALK--ELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEA 156 (972)
T ss_pred ccceeeeeeeeeeeeeeeeeehhhHHHHHHHH--hcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEee
Confidence 89999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred Cceeeeec-ccCCCCC-----------------CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH----------
Q 043360 354 DGLMLDDV-LNSEIDP-----------------DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN---------- 405 (1108)
Q Consensus 354 ~~l~VdeS-LTGES~p-----------------~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~---------- 405 (1108)
.++.|||| |||||.| ++.|++|+||.|..|+++|+|+.||.+|++|++...+
T Consensus 157 ~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPL 236 (972)
T KOG0202|consen 157 KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPL 236 (972)
T ss_pred eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcH
Confidence 99999999 9999999 5678999999999999999999999999999999888
Q ss_pred ------HHH----HHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHh
Q 043360 406 ------LSL----AVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAV 475 (1108)
Q Consensus 406 ------~~~----~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~v 475 (1108)
++- ++.++++.++++++-+... +.+. .. .++.+..+|..++++.++||
T Consensus 237 qk~ld~~G~qLs~~is~i~v~v~~~nig~f~~-p~~~--g~-------------------~fk~~~~~f~IaVsLAVAAI 294 (972)
T KOG0202|consen 237 QKKLDEFGKQLSKVISFICVGVWLLNIGHFLD-PVHG--GS-------------------WFKGALYYFKIAVSLAVAAI 294 (972)
T ss_pred HHHHHHHHHHHHHHheehhhhHHHhhhhhhcc-cccc--cc-------------------chhchhhhhhHHHHHHHHhc
Confidence 232 3333333343332111110 0000 01 12367889999999999999
Q ss_pred cCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCC------c---
Q 043360 476 QHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNND------V--- 546 (1108)
Q Consensus 476 P~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~------~--- 546 (1108)
|||||..+|++|+.|.+|| +|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+...... .
T Consensus 295 PEGLPaVvT~tLALG~~rM-akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty 373 (972)
T KOG0202|consen 295 PEGLPAVVTTTLALGTRRM-AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTY 373 (972)
T ss_pred cCCCcchhhhhHHHhHHHH-HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCcee
Confidence 9999999999999999999 99999999999999999999999999999999999999999876432211 0
Q ss_pred ---------------chhhhHHHHHHHHHHhccccc---cc-----ccCCChhHHHHHHHHHHcCCChhh----------
Q 043360 547 ---------------ASEINQAVLQALERGIGASVL---VP-----EISLWPTTDWLVSWAKSRSLNVEF---------- 593 (1108)
Q Consensus 547 ---------------~~~~~~~~~~~l~~~~~~~~~---~~-----~~~g~p~e~ALl~~a~~~g~~~~~---------- 593 (1108)
.....+.+.+++..+..|+.. .. +..|.|+|.||..++++.|+.-..
T Consensus 374 ~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~ 453 (972)
T KOG0202|consen 374 SPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEAS 453 (972)
T ss_pred CCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccc
Confidence 011233444555554445432 22 338999999999999998875322
Q ss_pred -----hcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCC-ccccc-hhhHHHHHHH
Q 043360 594 -----VDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEG-KSFEI-KGEKRRFQKL 666 (1108)
Q Consensus 594 -----~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g-~~~~l-~~~~~~~~~~ 666 (1108)
..+.++...++||+|+||+|||.+..+.++. .+.+|+|||+|.|+++|++++..+| ..+|| +..++.+.+.
T Consensus 454 ~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~--~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~ 531 (972)
T KOG0202|consen 454 ACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQS--GYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILAN 531 (972)
T ss_pred cchhHHHHhhhheeEeecccccceEEEEEecCCCCc--cceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHH
Confidence 2233566799999999999999998766531 2789999999999999999888777 44899 9999999999
Q ss_pred HHHHHhCCCeEEEEEEecCc-------------chhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcH
Q 043360 667 IKDMEDSGLRPIAFACGQTE-------------VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDEL 729 (1108)
Q Consensus 667 i~~~a~~GlR~L~~A~k~l~-------------~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~ 729 (1108)
..+|+++|||||++|+++.. .+...|+||+|+|++|| |++|+++|+.|++|||+|+|+||||.
T Consensus 532 ~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~ 611 (972)
T KOG0202|consen 532 VYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNK 611 (972)
T ss_pred HHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCH
Confidence 99999999999999999764 34567899999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCC--CccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCH
Q 043360 730 LAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDT 807 (1108)
Q Consensus 730 ~tA~~IA~~~GI~~~~~--~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~ 807 (1108)
+||++||+++||...++ ...+++|++|+.++++++.+...++.+|+|++|++|.+||+.||++|++|||||| |+||+
T Consensus 612 ~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGD-GVNDA 690 (972)
T KOG0202|consen 612 ETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGD-GVNDA 690 (972)
T ss_pred HHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCC-Cccch
Confidence 99999999999997633 4589999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCch
Q 043360 808 PALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPI 885 (1108)
Q Consensus 808 ~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl 885 (1108)
||||.||||||||++|||+||+|||+||. ||++|+.++.+||.+|+||++|+.|++..|+.++.+.++++.+..+.|+
T Consensus 691 pALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL 770 (972)
T KOG0202|consen 691 PALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPL 770 (972)
T ss_pred hhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCCC----
Q 043360 886 TSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQV--IPGM---- 959 (1108)
Q Consensus 886 ~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~~~~~--~~~~---- 959 (1108)
+|+|+||+|+++|.+|+-+|++|||++++|++||+++++++|+...+..++..|+|..+.....+.+-.. -...
T Consensus 771 ~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~ 850 (972)
T KOG0202|consen 771 IPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQ 850 (972)
T ss_pred cchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhh
Confidence 9999999999999999999999999999999999999999999999999999998887654433321111 0000
Q ss_pred -------------------CccccchhhhHHHHHHHHHHHhhhhhcccccccc-cccchhHHHHHHHHHHHHHHHHH--H
Q 043360 960 -------------------NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLP-VVLKKFNVLMVFLIVIAAQVLVV--E 1017 (1108)
Q Consensus 960 -------------------~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~-~~~~n~~~~~~i~~~~~~~~~~v--~ 1017 (1108)
......||.|.+|++..+||.++||+.+ .++|. ++|.|.||++++.+++++|++++ +
T Consensus 851 ~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~-~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp 929 (972)
T KOG0202|consen 851 LAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSEN-KSLFTMPPWSNRWLLWAIALSFVLHFLVLYVP 929 (972)
T ss_pred hcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCC-cceEEecccccHHHHHHHHHHHHhhheEEEec
Confidence 1223459999999999999999999864 44555 99999999999999999998765 5
Q ss_pred HhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043360 1018 FATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSFL 1058 (1108)
Q Consensus 1018 ~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~~ 1058 (1108)
+++.+|++.+|++.+|++.+.+.+..+++++++|++.|+++
T Consensus 930 ~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 930 PLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred hhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 78999999999999999999999999999999999998764
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-138 Score=1326.71 Aligned_cols=854 Identities=28% Similarity=0.456 Sum_probs=751.7
Q ss_pred CCCCCHHHHHHHhhh-cChhHHHhhCCHHHHHHHhCCCCCCCCC--hhhhhchhhc---CCCCCCCCchHHHHHHHHhhh
Q 043360 173 EDRILPDLLDRIVKA-RNLNLLKEIGGPEKVASAFGSHLEHGIQ--GDQLPQPQIW---NTIKPNHAREFFLFLLKASNN 246 (1108)
Q Consensus 173 ~~~~~~~~l~~~~~~-~~~~~l~~~gg~~~l~~~L~t~~~~GLs--~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~ 246 (1108)
+|.+..+++.++.+. ++.+.++++||++++++.|++|.++||+ ++|+++|+++ |++++++++++|+.+++||++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~ 96 (941)
T TIGR01517 17 GFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSD 96 (941)
T ss_pred CCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhC
Confidence 688999999999976 6789999999999999999999999999 9999999999 999999999999999999999
Q ss_pred hHHHHHHHHHHHhhccccc-----cCCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCE
Q 043360 247 FNILLLLVAAALSFVTGTI-----EQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGR 321 (1108)
Q Consensus 247 ~~~i~lli~ails~~~~~~-----~~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~ 321 (1108)
+++++|++++++++++++. ..++..+|++++.|+++++++.+++++++|++++++++++ +..++.+++|+|||+
T Consensus 97 ~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~-~~~~~~~~~ViRdG~ 175 (941)
T TIGR01517 97 QTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLN-REKSAQKIAVIRGGQ 175 (941)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-hccCCCceEEEECCE
Confidence 9999999999999997743 3445568999999999999999999999999999999998 456688999999999
Q ss_pred EEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC-----CCCCeeeecceEeeceEEEEEEEeccc
Q 043360 322 EQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP-----DRNPFLFSGSKVMEGHGTMLLISVGGN 395 (1108)
Q Consensus 322 ~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p-----~~~~~l~~Gt~v~~G~~~~~Vv~tG~~ 395 (1108)
+++|+++||||||+|.|++||+|||||++++|+.+.|||| |||||.| ...|++|+||.|.+|+++++|++||.+
T Consensus 176 ~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~ 255 (941)
T TIGR01517 176 EQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVN 255 (941)
T ss_pred EEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCC
Confidence 9999999999999999999999999999999987899999 9999999 345789999999999999999999999
Q ss_pred cHHHHHHHHH-------------------HH---HHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhh
Q 043360 396 IASGQVLRSN-------------------LS---LAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERF 453 (1108)
Q Consensus 396 T~~g~i~~~~-------------------~~---~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 453 (1108)
|.+|++.+.+ +. +.+++++++++++.+++... ..+. .... .
T Consensus 256 T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~--~~~~-~~~~--~------------ 318 (941)
T TIGR01517 256 SFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRII--RGDG-RDTE--E------------ 318 (941)
T ss_pred cHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--cccc-cccc--h------------
Confidence 9999998776 11 12222222222222222211 0000 0000 0
Q ss_pred ccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEE
Q 043360 454 LLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVS 533 (1108)
Q Consensus 454 ~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~ 533 (1108)
....+...+..++++++++||||||+++|++++.++++| +++|+++|+++++|+||++|+||||||||||+|+|+|+
T Consensus 319 --~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m-ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~ 395 (941)
T TIGR01517 319 --DAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM-MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVV 395 (941)
T ss_pred --hhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH-HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEE
Confidence 012567889999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred EEEECCcccCCCcc-hhhhHHHHHHHHHHhc-ccccc--------cccCCChhHHHHHHHHHHcCCChhhhcccceeeee
Q 043360 534 KFCIGEKDVNNDVA-SEINQAVLQALERGIG-ASVLV--------PEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEH 603 (1108)
Q Consensus 534 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~-~~~~~--------~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~ 603 (1108)
+++..+..++.++. ...++...+++..+++ |+... .+..|||+|.||++++.+.|.+....+.++++++.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~ 475 (941)
T TIGR01517 396 QGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKI 475 (941)
T ss_pred EEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccc
Confidence 99986644332210 1112334455555444 33221 14579999999999999988887777777889999
Q ss_pred ecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEe
Q 043360 604 RKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACG 683 (1108)
Q Consensus 604 ~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k 683 (1108)
+||+|+||||+++++.++++ +++|+|||||.|+++|+.+.+.+|..+++++.++++++.+++++++|+|++++|||
T Consensus 476 ~pF~s~~k~msvv~~~~~~~----~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~ 551 (941)
T TIGR01517 476 YPFNSERKFMSVVVKHSGGK----VREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYR 551 (941)
T ss_pred cccCCCCCeEEEEEEeCCCc----EEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEE
Confidence 99999999999999976554 89999999999999999887778888888337889999999999999999999999
Q ss_pred cCcc-----hhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchh
Q 043360 684 QTEV-----SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGE 754 (1108)
Q Consensus 684 ~l~~-----~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~ 754 (1108)
+++. .+..|+||+|+|++++ |||++++|+.||++||+|+|+||||+.||.+||++|||.++ ...+++|+
T Consensus 552 ~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~--~~~vi~G~ 629 (941)
T TIGR01517 552 DFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF--GGLAMEGK 629 (941)
T ss_pred ecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC--CceEeeHH
Confidence 8752 2334789999999999 99999999999999999999999999999999999999875 56799999
Q ss_pred hhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchh
Q 043360 755 QFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIV 834 (1108)
Q Consensus 755 ~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADiv 834 (1108)
+++.++++++.++++++.||||++|+||+++|+.+|++|++|+|||| |+||+||||+||||||||++|+|+|+++||++
T Consensus 630 ~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GD-GvNDapALk~AdVGIAmg~~gtdvAk~aADiv 708 (941)
T TIGR01517 630 EFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGD-GTNDAPALKLADVGFSMGISGTEVAKEASDII 708 (941)
T ss_pred HhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECC-CCchHHHHHhCCcceecCCCccHHHHHhCCEE
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCC
Q 043360 835 IS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQ 912 (1108)
Q Consensus 835 l~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~ 912 (1108)
++ +|++|++++++||++|+|++++++|.+++|+..+++.+++.++.+++|++++|++|+|+++|.+|+++|++|+|++
T Consensus 709 L~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~ 788 (941)
T TIGR01517 709 LLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTE 788 (941)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccH
Confidence 99 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC---------ccccchhhhHHHHHHHHHHHhhh
Q 043360 913 EPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMN---------RDIRKAMTFNSFTLCQVFNQFDA 983 (1108)
Q Consensus 913 ~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~~~---------~~~~~T~~F~~~v~~q~~~~~~~ 983 (1108)
++|++||+.++++++++.+|+++++++++++++.+++++.+..+++.. ....+|++|++|+++|+||.+++
T Consensus 789 ~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~ 868 (941)
T TIGR01517 789 ALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINA 868 (941)
T ss_pred HHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998888777655444221 24578999999999999999999
Q ss_pred hhcccccccccccchhHHHHHHHHHHHHHHHHHHHhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 043360 984 MRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIA 1054 (1108)
Q Consensus 984 r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~~v~~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~ 1054 (1108)
|+....++|+++++|++++.++++++++|++++++++.+|++.||++.+|++|++++++.+++.++.|++|
T Consensus 869 r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~ 939 (941)
T TIGR01517 869 RKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIP 939 (941)
T ss_pred ccCCcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99765578889999999999999999999999999999999999999999999999999999999999876
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-132 Score=1268.27 Aligned_cols=815 Identities=18% Similarity=0.273 Sum_probs=699.3
Q ss_pred CCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCc
Q 043360 197 GGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGW 273 (1108)
Q Consensus 197 gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~ 273 (1108)
-.++++++.|+||+.+||+++|+++|+++ |++++++.+++|+.+++||+++++++|+++++++++.+ .|
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--------~~ 81 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--------DW 81 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------hH
Confidence 36789999999999899999999999999 99999999999999999999999999999999999987 69
Q ss_pred chhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEec
Q 043360 274 HDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNS 353 (1108)
Q Consensus 274 ~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g 353 (1108)
.+++.|+++++++++++.++++++++++++|+ +..+.+++|+|||++++|+++||||||||.|++||+|||||+|+++
T Consensus 82 ~~~~iIl~vv~in~~i~~~QE~~aekal~aL~--~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~ 159 (1053)
T TIGR01523 82 IEGGVISAIIALNILIGFIQEYKAEKTMDSLK--NLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIET 159 (1053)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEe
Confidence 99999999999999999999999999999998 6778899999999999999999999999999999999999999999
Q ss_pred Cceeeeec-ccCCCCC---C---------------CCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH---------
Q 043360 354 DGLMLDDV-LNSEIDP---D---------------RNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN--------- 405 (1108)
Q Consensus 354 ~~l~VdeS-LTGES~p---~---------------~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~--------- 405 (1108)
++|.|||| |||||.| . ..|++|+||.|.+|+++++|++||.+|++|++.+.+
T Consensus 160 ~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~ 239 (1053)
T TIGR01523 160 KNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQR 239 (1053)
T ss_pred CceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccc
Confidence 99999999 9999999 1 137899999999999999999999999999998754
Q ss_pred ------------------------------------------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccc
Q 043360 406 ------------------------------------------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSV 443 (1108)
Q Consensus 406 ------------------------------------------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1108)
++.+++++.+++.++.++....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---------------- 303 (1053)
T TIGR01523 240 PEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---------------- 303 (1053)
T ss_pred ccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------------
Confidence 1111222222222222222111
Q ss_pred cchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccC
Q 043360 444 GTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTG 523 (1108)
Q Consensus 444 g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTG 523 (1108)
..+...+..+++++++++|||||+.+|++++++++|| +++|++||+++++|+||++++||+||||
T Consensus 304 --------------~~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM-ak~~~lVr~L~avEtLG~vtvICsDKTG 368 (1053)
T TIGR01523 304 --------------DVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANM-SKRNVIVRKLDALEALGAVNDICSDKTG 368 (1053)
T ss_pred --------------hhhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HhcCCEeccchhhhhccCccEEEecCcC
Confidence 0123566788999999999999999999999999999 9999999999999999999999999999
Q ss_pred cccccceEEEEEEECCc-c---------cCCC--c---------------c--------------h--h-----hhHHHH
Q 043360 524 GLVCNRVDVSKFCIGEK-D---------VNND--V---------------A--------------S--E-----INQAVL 555 (1108)
Q Consensus 524 TLT~n~m~v~~~~~~~~-~---------~~~~--~---------------~--------------~--~-----~~~~~~ 555 (1108)
|||+|+|+|+++|..+. . |... . . . + .++...
T Consensus 369 TLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1053)
T TIGR01523 369 TITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFI 448 (1053)
T ss_pred ccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHH
Confidence 99999999999997541 1 1100 0 0 0 0 011234
Q ss_pred HHHHHHhccccc---c------cccCCChhHHHHHHHHHHcCCChh------hh-------------------cccceee
Q 043360 556 QALERGIGASVL---V------PEISLWPTTDWLVSWAKSRSLNVE------FV-------------------DQNLSVL 601 (1108)
Q Consensus 556 ~~l~~~~~~~~~---~------~~~~g~p~e~ALl~~a~~~g~~~~------~~-------------------~~~~~il 601 (1108)
+++..+.+|+.. . ....|||+|.||++++.+.|++.. .. +.+|+++
T Consensus 449 ~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (1053)
T TIGR01523 449 KLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFI 528 (1053)
T ss_pred HHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceE
Confidence 455555555532 1 134689999999999998887421 11 2357899
Q ss_pred eeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCC-ccccc-hhhHHHHHHHHHHHHhCCCeEEE
Q 043360 602 EHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEG-KSFEI-KGEKRRFQKLIKDMEDSGLRPIA 679 (1108)
Q Consensus 602 ~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g-~~~~l-~~~~~~~~~~i~~~a~~GlR~L~ 679 (1108)
+++||||+||||+++++.+++++ +++|+|||||.|+++|+++...+| +.+++ ++.++++++.+++|+++|+|||+
T Consensus 529 ~~~pFds~rK~msvv~~~~~~~~---~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa 605 (1053)
T TIGR01523 529 AEFPFDSEIKRMASIYEDNHGET---YNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLA 605 (1053)
T ss_pred EEeccCCCCCeEEEEEEeCCCCE---EEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEE
Confidence 99999999999999998765543 889999999999999998766555 56788 88899999999999999999999
Q ss_pred EEEecCcc--------------hhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCC
Q 043360 680 FACGQTEV--------------SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGN 741 (1108)
Q Consensus 680 ~A~k~l~~--------------~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI 741 (1108)
+|||+++. ++..|+||+|+|++++ |+|++++|+.|++|||+|||+|||++.||.+||++|||
T Consensus 606 ~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi 685 (1053)
T TIGR01523 606 FASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGI 685 (1053)
T ss_pred EEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCC
Confidence 99998752 1346899999999999 99999999999999999999999999999999999999
Q ss_pred CCCC--------CCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhC
Q 043360 742 FRPE--------SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEA 813 (1108)
Q Consensus 742 ~~~~--------~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~A 813 (1108)
..++ ....+++|++++.++++++.++.+++.||||++|+||.++|+.+|++|++|+|+|| |+||+||||+|
T Consensus 686 ~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GD-GvNDapaLk~A 764 (1053)
T TIGR01523 686 IPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGD-GVNDSPSLKMA 764 (1053)
T ss_pred CCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCC-CcchHHHHHhC
Confidence 8531 13579999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred CccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhc---C--CCchh
Q 043360 814 DVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLIL---E--ESPIT 886 (1108)
Q Consensus 814 dVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~---~--~~pl~ 886 (1108)
|||||||++|+|+||++||+++. +|++|+++++|||++|+|++|+++|.+++|+..+++.+++.++. + +.||+
T Consensus 765 dVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~ 844 (1053)
T TIGR01523 765 NVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLS 844 (1053)
T ss_pred CccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchH
Confidence 99999999999999999999999 89999999999999999999999999999999999999888874 2 47999
Q ss_pred HHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--C------
Q 043360 887 SIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIP--G------ 958 (1108)
Q Consensus 887 ~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~~~~~~~--~------ 958 (1108)
++|+||+|+++|.+|+++|++|+|++++|++||+.++++++++.+++.++.++++++++.+..+++....+ +
T Consensus 845 ~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~ 924 (1053)
T TIGR01523 845 PVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDC 924 (1053)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccc
Confidence 99999999999999999999999999999999999999999999999999999998877665543211000 0
Q ss_pred -----C---CccccchhhhHHHHHHHHHHHhhhhhcccccccc----------------cccchhHHHHHHHHHHHHHHH
Q 043360 959 -----M---NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLP----------------VVLKKFNVLMVFLIVIAAQVL 1014 (1108)
Q Consensus 959 -----~---~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~----------------~~~~n~~~~~~i~~~~~~~~~ 1014 (1108)
. +...++|+.|.+++++|+++.+++|+.+ .++|+ +.+.|++++++++++++++++
T Consensus 925 ~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~ 1003 (1053)
T TIGR01523 925 DAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFD-NSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFP 1003 (1053)
T ss_pred cccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCc-hhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHH
Confidence 0 1235689999999999999999999853 33343 367999999999999999877
Q ss_pred HHH--HhHh-hhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043360 1015 VVE--FATS-LAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSFL 1058 (1108)
Q Consensus 1015 ~v~--~~~~-~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~~ 1058 (1108)
++| +++. +|++.|+++ +|+++++++++.+++.++.|++.|++.
T Consensus 1004 ~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1004 TIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 664 6775 999999996 999999999999999999998876553
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-131 Score=1245.87 Aligned_cols=796 Identities=25% Similarity=0.392 Sum_probs=699.9
Q ss_pred HHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCc---
Q 043360 200 EKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGW--- 273 (1108)
Q Consensus 200 ~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~--- 273 (1108)
.++...+.++...||+++|+.+|++. |++++.+..++|+.++.||+++++++|+++++++++.+ .|
T Consensus 31 ~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~--------~~~~~ 102 (917)
T COG0474 31 NELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG--------DWVDA 102 (917)
T ss_pred hhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------ccccc
Confidence 37788889999999999999999998 99999999999999999999999999999999999998 35
Q ss_pred -chhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEe
Q 043360 274 -HDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVN 352 (1108)
Q Consensus 274 -~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~ 352 (1108)
.+...|+.+++++.++..+++|++++..++++ +..+.+++|+|||++++|+++||||||||.|++||+||||++|++
T Consensus 103 ~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk--~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~ 180 (917)
T COG0474 103 GVDAIVILLVVVINALLGFVQEYRAEKALEALK--KMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLE 180 (917)
T ss_pred CcceeeehHHHHHHHHHHHHHHHHHHHHHHHHH--hhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEE
Confidence 56668888899999999999999999999998 777999999999999999999999999999999999999999999
Q ss_pred cCceeeeec-ccCCCCC-----------------CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH---------
Q 043360 353 SDGLMLDDV-LNSEIDP-----------------DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN--------- 405 (1108)
Q Consensus 353 g~~l~VdeS-LTGES~p-----------------~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~--------- 405 (1108)
+++++|||| |||||+| +.+|++|+||.|++|++.++|++||.+|+.|++...+
T Consensus 181 ~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~ 260 (917)
T COG0474 181 SSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTP 260 (917)
T ss_pred ecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCc
Confidence 999999999 9999999 1258999999999999999999999999999999888
Q ss_pred -------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCc
Q 043360 406 -------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHG 478 (1108)
Q Consensus 406 -------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~ 478 (1108)
++.++..++++..++.+..+.+. ....+...|+.++++++.+||+|
T Consensus 261 l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~v~l~va~IPeg 313 (917)
T COG0474 261 LQRKLNKLGKFLLVLALVLGALVFVVGLFR---------------------------GGNGLLESFLTALALAVAAVPEG 313 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------cCccHHHHHHHHHHHHHhccccc
Confidence 33333333333333333222210 00136789999999999999999
Q ss_pred hhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECC--cccCCCcchhhhHHHHH
Q 043360 479 MPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGE--KDVNNDVASEINQAVLQ 556 (1108)
Q Consensus 479 Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~--~~~~~~~~~~~~~~~~~ 556 (1108)
||+.++++++.++++| ++++++||+++++|+||++++||||||||||+|+|+|++++..+ ...+ ......++...+
T Consensus 314 Lp~~vti~la~g~~~m-ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~-~~~~~~~~~~~~ 391 (917)
T COG0474 314 LPAVVTIALALGAQRM-AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID-DKDLKDSPALLR 391 (917)
T ss_pred hHHHHHHHHHHHHHHH-HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc-ccccccchHHHH
Confidence 9999999999999999 99999999999999999999999999999999999999999984 2222 111112233445
Q ss_pred HHHHHhcccccc-----cccCCChhHHHHHHHHHHcCC--ChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEE
Q 043360 557 ALERGIGASVLV-----PEISLWPTTDWLVSWAKSRSL--NVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMH 629 (1108)
Q Consensus 557 ~l~~~~~~~~~~-----~~~~g~p~e~ALl~~a~~~g~--~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~ 629 (1108)
++..+.+||... ++..|||+|.||++++++.|+ +....+.++++++.+||||+||||||+++..+++ ++
T Consensus 392 ~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~----~~ 467 (917)
T COG0474 392 FLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGK----YI 467 (917)
T ss_pred HHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCc----EE
Confidence 566565676542 345899999999999999998 8888888899999999999999999999966665 89
Q ss_pred EEEeccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCcc------hhhhccCceeeEEEe
Q 043360 630 MHWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEV------SEIKENGLHLLALAG 702 (1108)
Q Consensus 630 l~~KGA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~------~~~~E~~l~llG~i~ 702 (1108)
+++|||||.|+++|++. |+..++ ++.++.+++..++|+++|||+|++|||.++. .+..|+||+|+|+++
T Consensus 468 ~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g 543 (917)
T COG0474 468 LFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTG 543 (917)
T ss_pred EEEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhh
Confidence 99999999999999986 777788 8999999999999999999999999998751 157899999999999
Q ss_pred c----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccC
Q 043360 703 L----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL 778 (1108)
Q Consensus 703 i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~s 778 (1108)
| |+|++++|+.|++|||+|||+||||++||++||++||+..+....++++|.+++.++++++.+.++++.||||+|
T Consensus 544 ~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvs 623 (917)
T COG0474 544 IEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVS 623 (917)
T ss_pred ccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcC
Confidence 9 999999999999999999999999999999999999998752225699999999999999999999999999999
Q ss_pred HhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhh
Q 043360 779 ADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQ 856 (1108)
Q Consensus 779 P~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~ 856 (1108)
|+||.++|+.||++|++|||||| |+||+||||+||||||||.+|+|+||+|||+++. +|..|+.+++|||++|.|++
T Consensus 624 P~qK~~IV~~lq~~g~vVamtGD-GvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~ 702 (917)
T COG0474 624 PEQKARIVEALQKSGHVVAMTGD-GVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIK 702 (917)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCC-CchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999 9999999999999999999999999999999999 99999999999999999999
Q ss_pred hhhhhHhhcchhhHHHHHHHHHhcCC-CchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHHHHHH
Q 043360 857 KFTKLQLTGCASGLLITLVTTLILEE-SPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHT 935 (1108)
Q Consensus 857 k~i~~~l~~ni~~i~~~~~~~~~~~~-~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i 935 (1108)
|+++|.+++|+..+++.+++.++..+ .|++++|++|+|+++|.+|+++|+.++|+.+.|++||+++.+++++++.++.+
T Consensus 703 k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~ 782 (917)
T COG0474 703 KFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRF 782 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHH
Confidence 99999999999999999999888776 99999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCC--------ccccchhhhHHHHHHHHHHHhhhhhcccccccc-cccchhHHHHHHH
Q 043360 936 AVQVLCQVGVFLIFQFAGQVIPGMN--------RDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLP-VVLKKFNVLMVFL 1006 (1108)
Q Consensus 936 ~~~~~~~~~v~~~~~~~~~~~~~~~--------~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~-~~~~n~~~~~~i~ 1006 (1108)
+++..++.++++++.|......... .....|+.|+.++++|.++.+.+|.. ..++|. .++.|+.++++++
T Consensus 783 i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~ 861 (917)
T COG0474 783 ILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR-GRPFLSSLLFSNKYLWLALL 861 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhcccccCHHHHHHHH
Confidence 8888888777776655443322211 44578999999999999999999984 355565 5689999999999
Q ss_pred HHHHHHHHHHH--HhH-hhhccccCChhHHHHHHHHHHHHH
Q 043360 1007 IVIAAQVLVVE--FAT-SLAGYQRLNGMQWGICFILAVLPW 1044 (1108)
Q Consensus 1007 ~~~~~~~~~v~--~~~-~~f~~~~l~~~~wl~~i~~~~~~l 1044 (1108)
++++++++.++ +.. ..|+..+++..+|++++++....+
T Consensus 862 ~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 902 (917)
T COG0474 862 VIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLL 902 (917)
T ss_pred HHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHHHHH
Confidence 99998887765 344 689999999999999887774443
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-129 Score=1235.86 Aligned_cols=800 Identities=23% Similarity=0.357 Sum_probs=708.3
Q ss_pred CHHHHHHHhCCCCCCCCC-hhhhhchhhc---CCCCCCCCchHHHHHHHHh-hhhHHHHHHHHHHHhhccccccCCCCCC
Q 043360 198 GPEKVASAFGSHLEHGIQ-GDQLPQPQIW---NTIKPNHAREFFLFLLKAS-NNFNILLLLVAAALSFVTGTIEQGPKDG 272 (1108)
Q Consensus 198 g~~~l~~~L~t~~~~GLs-~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~-~~~~~i~lli~ails~~~~~~~~~~~~~ 272 (1108)
+++++++.|++|.++||+ ++|+++|+++ |++++++++++|+.+++|| ++|++++|+++++++++.+ .
T Consensus 8 ~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g--------~ 79 (884)
T TIGR01522 8 SVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG--------N 79 (884)
T ss_pred CHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc--------c
Confidence 688999999999999999 8899999999 9999999999999999999 9999999999999999988 6
Q ss_pred cchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEe
Q 043360 273 WHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVN 352 (1108)
Q Consensus 273 ~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~ 352 (1108)
|.+++.|++++++++.++.+++|++++.+++|. +..+.+++|+|||++++|+++||||||||.|++||+|||||++++
T Consensus 80 ~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~--~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~ 157 (884)
T TIGR01522 80 IDDAVSITLAILIVVTVGFVQEYRSEKSLEALN--KLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVE 157 (884)
T ss_pred hhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEE
Confidence 999999999999999999999999999999998 777889999999999999999999999999999999999999999
Q ss_pred cCceeeeec-ccCCCCC---CC--------------CCeeeecceEeeceEEEEEEEeccccHHHHHHHHH---------
Q 043360 353 SDGLMLDDV-LNSEIDP---DR--------------NPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN--------- 405 (1108)
Q Consensus 353 g~~l~VdeS-LTGES~p---~~--------------~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~--------- 405 (1108)
|+++.|||| |||||.| .. +|++|+||.|.+|+++++|++||.+|.+|++.+.+
T Consensus 158 g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~ 237 (884)
T TIGR01522 158 AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTP 237 (884)
T ss_pred cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCc
Confidence 988899999 9999999 11 36899999999999999999999999999998877
Q ss_pred -------HHHHHH----HHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHH
Q 043360 406 -------LSLAVT----VLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIA 474 (1108)
Q Consensus 406 -------~~~~~~----~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 474 (1108)
++..+. +++.+++++.++.+ .++...+..++++++++
T Consensus 238 lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~v~llv~a 285 (884)
T TIGR01522 238 LQKSMDLLGKQLSLVSFGVIGVICLVGWFQG--------------------------------KDWLEMFTISVSLAVAA 285 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------------------------CCHHHHHHHHHHHHHHH
Confidence 221111 11111222221111 14667889999999999
Q ss_pred hcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCC--------Cc
Q 043360 475 VQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNN--------DV 546 (1108)
Q Consensus 475 vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~--------~~ 546 (1108)
||||||++++++++++++|| +++|+++|+++++|+||++|+||+|||||||+|+|+|.+++..+..+.. ..
T Consensus 286 iP~~Lp~~vt~~l~~~~~r~-ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~ 364 (884)
T TIGR01522 286 IPEGLPIIVTVTLALGVLRM-SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFG 364 (884)
T ss_pred ccchHHHHHHHHHHHHHHHH-hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCC
Confidence 99999999999999999999 9999999999999999999999999999999999999999876532210 00
Q ss_pred ---------chhhhHHHHHHHHHHhccccc-----ccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCe
Q 043360 547 ---------ASEINQAVLQALERGIGASVL-----VPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKV 612 (1108)
Q Consensus 547 ---------~~~~~~~~~~~l~~~~~~~~~-----~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkr 612 (1108)
....++...+++..+.+|+.. .....|||+|+||++++++.|++ ..++.++.++.+||+|+|||
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~ 442 (884)
T TIGR01522 365 EVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKW 442 (884)
T ss_pred cccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCe
Confidence 001122344566555544432 12345899999999999988764 34456889999999999999
Q ss_pred EEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCcchhhh
Q 043360 613 CGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIK 691 (1108)
Q Consensus 613 msviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~ 691 (1108)
|+++++...+++ +++|+|||||.|+++|+++...+|..+++ ++.++++++.+++++++|+|++++|||+ .
T Consensus 443 m~v~~~~~~~~~---~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~------~ 513 (884)
T TIGR01522 443 MAVKCVHRQDRS---EMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGP------E 513 (884)
T ss_pred EEEEEEEcCCCe---EEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEc------C
Confidence 999998754433 88999999999999999988877888888 8888999999999999999999999987 3
Q ss_pred ccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHH
Q 043360 692 ENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAK 767 (1108)
Q Consensus 692 E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~ 767 (1108)
+++|+|+|++++ |||++++|+.|+++||+++|+|||+..||.++|+++||... ...+++|++++.++++++.+.
T Consensus 514 ~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~~~~~~l~~~ 591 (884)
T TIGR01522 514 KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDAMDDQQLSQI 591 (884)
T ss_pred CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHhCCHHHHHHH
Confidence 678999999999 99999999999999999999999999999999999999865 456889999999999999999
Q ss_pred hcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHH
Q 043360 768 LDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPIL 845 (1108)
Q Consensus 768 ~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li 845 (1108)
++++.||||++|+||.++|+.+|+.|++|+|+|| |+||+|||++||||||||.+|+|+|+++||++++ +|+.|++++
T Consensus 592 ~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGD-GvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 592 VPKVAVFARASPEHKMKIVKALQKRGDVVAMTGD-GVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred hhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECC-CcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 9999999999999999999999999999999999 9999999999999999998899999999999998 899999999
Q ss_pred HhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCC
Q 043360 846 KLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKS 925 (1108)
Q Consensus 846 ~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~ 925 (1108)
++||++|+|+++++.|+++.|+..+++.+++.++..+.|++++|++|+|+++|.+|+++|++|+|++++|++||+.++++
T Consensus 671 ~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~ 750 (884)
T TIGR01522 671 EEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDK 750 (884)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCC
Confidence 99999999999999999999999999988888888899999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccchhhhHHHHHHHHHHHhhhhhcccccccc-cccchhHHHHH
Q 043360 926 LLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLP-VVLKKFNVLMV 1004 (1108)
Q Consensus 926 lis~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~-~~~~n~~~~~~ 1004 (1108)
++++.+|+.++.+|++++++.+++++.... .+.....++|++|++|+++|+||.+|+|+. +.++|+ ++++|++++++
T Consensus 751 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~ 828 (884)
T TIGR01522 751 ILTKDLIKKILVSAIIIVVGTLFVFVREMQ-DGVITARDTTMTFTCFVFFDMFNALACRSQ-TKSVFEIGFFSNRMFNYA 828 (884)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcchhhHHHHHHHHHHHHHHHHHHHHccC-CccccccCcccCHHHHHH
Confidence 999999999999999998877666543321 121234568999999999999999999994 567787 78899999999
Q ss_pred HHHHHHHHHHHHH--HhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043360 1005 FLIVIAAQVLVVE--FATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADS 1056 (1108)
Q Consensus 1005 i~~~~~~~~~~v~--~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~ 1056 (1108)
+++++++|+++++ +++.+|++.|+++.+|++|++++++.+++.++.|++.|+
T Consensus 829 ~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 829 VGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999988876 789999999999999999999999999999999988754
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-128 Score=1240.61 Aligned_cols=826 Identities=17% Similarity=0.232 Sum_probs=701.5
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhcccccc-----
Q 043360 195 EIGGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIE----- 266 (1108)
Q Consensus 195 ~~gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~----- 266 (1108)
+--+.+++++.|++|.++||+++|+++|+++ |++++++++++|+.++++|.++++++++++++++++.....
T Consensus 18 ~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~ 97 (997)
T TIGR01106 18 HKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEE 97 (997)
T ss_pred hhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCC
Confidence 3447889999999999999999999999999 99999999999999999999999999999999977653221
Q ss_pred CCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCc
Q 043360 267 QGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPG 346 (1108)
Q Consensus 267 ~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPa 346 (1108)
......|++++.++++++++.+++.++++++++.+++++ ...+.+++|+|||++++|+++||||||+|.|++||+|||
T Consensus 98 ~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~--~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 98 EPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFK--NMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 112236899999999999999999999999999999998 677889999999999999999999999999999999999
Q ss_pred ceEEEecCceeeeec-ccCCCCC---C----------CCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH-------
Q 043360 347 DGLVVNSDGLMLDDV-LNSEIDP---D----------RNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN------- 405 (1108)
Q Consensus 347 Dgill~g~~l~VdeS-LTGES~p---~----------~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~------- 405 (1108)
||++++|++|.|||| |||||.| . .+|++|+||.|.+|++.++|++||.+|++|++.+.+
T Consensus 176 D~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 255 (997)
T TIGR01106 176 DLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGK 255 (997)
T ss_pred eEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCC
Confidence 999999998999999 9999999 1 235899999999999999999999999999998755
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhc
Q 043360 406 ---------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQ 476 (1108)
Q Consensus 406 ---------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP 476 (1108)
+...+..+.+++.++.++.... ....+...+..++++++++||
T Consensus 256 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~i~v~v~~iP 307 (997)
T TIGR01106 256 TPIAIEIEHFIHIITGVAVFLGVSFFILSLI----------------------------LGYTWLEAVIFLIGIIVANVP 307 (997)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------hcCCHHHHHHHHHHHHhhcCC
Confidence 1111111111111111111110 001456778889999999999
Q ss_pred CchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcc-------hh
Q 043360 477 HGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVA-------SE 549 (1108)
Q Consensus 477 ~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~-------~~ 549 (1108)
||||+++++++++++++| +++|++||+++++|+||++++||+|||||||+|+|+|.++++++..+..+.. ..
T Consensus 308 ~~L~~~v~i~l~~~~~~m-~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 386 (997)
T TIGR01106 308 EGLLATVTVCLTLTAKRM-ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFD 386 (997)
T ss_pred ccchHHHHHHHHHHHHHH-HHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCC
Confidence 999999999999999999 9999999999999999999999999999999999999999987754432110 00
Q ss_pred hh-HHHHHHHHHHhccccc------------ccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEE
Q 043360 550 IN-QAVLQALERGIGASVL------------VPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVL 616 (1108)
Q Consensus 550 ~~-~~~~~~l~~~~~~~~~------------~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsvi 616 (1108)
.. .....++..+.+||.. ..+..|||+|.||++++.+.+.+....++++++++.+||+|+||||+++
T Consensus 387 ~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v 466 (997)
T TIGR01106 387 KSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSI 466 (997)
T ss_pred cccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEE
Confidence 00 1122344434445432 1245799999999999997777777778889999999999999999998
Q ss_pred EEEcC--CCcceeEEEEEeccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCcch-----
Q 043360 617 VKING--GDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVS----- 688 (1108)
Q Consensus 617 v~~~~--~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~----- 688 (1108)
++..+ +++ +++|+|||||.|+++|++++ .+|+.+++ ++.++.+++.+++|+++|+|||++|||+++..
T Consensus 467 ~~~~~~~~~~---~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~ 542 (997)
T TIGR01106 467 HENEDPRDPR---HLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEG 542 (997)
T ss_pred EeccCCCCce---EEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCccccccc
Confidence 86432 233 88999999999999999876 47888899 88899999999999999999999999987521
Q ss_pred -----h---hhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCC----------
Q 043360 689 -----E---IKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES---------- 746 (1108)
Q Consensus 689 -----~---~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~---------- 746 (1108)
+ ..|+||+|+|++++ |+|++++|++|+++||+|+|+|||+..||.++|+++||+.++.
T Consensus 543 ~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~ 622 (997)
T TIGR01106 543 FQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARL 622 (997)
T ss_pred ccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhc
Confidence 1 23899999999999 9999999999999999999999999999999999999986421
Q ss_pred ------------CccccchhhhhhcCHHHHHHHhcccc--eecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhh
Q 043360 747 ------------NDIALEGEQFRELNSTERMAKLDSMT--LMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKE 812 (1108)
Q Consensus 747 ------------~~~vi~G~~l~~l~~~~~~~~~~~~~--V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~ 812 (1108)
...+++|++++.++++++.++++++. ||||++|+||+++|+.+|+.|++|+|+|| |+||+||||+
T Consensus 623 ~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GD-G~ND~paLk~ 701 (997)
T TIGR01106 623 NIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGD-GVNDSPALKK 701 (997)
T ss_pred cccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECC-CcccHHHHhh
Confidence 13799999999999999999999876 99999999999999999999999999999 9999999999
Q ss_pred CCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHH
Q 043360 813 ADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQL 890 (1108)
Q Consensus 813 AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~ql 890 (1108)
||||||||++|+|+||++||++|+ +|++|+++++|||++|+|++|+++|++++|+..+++.+++.++..++|++++|+
T Consensus 702 AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~ql 781 (997)
T TIGR01106 702 ADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITI 781 (997)
T ss_pred CCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHH
Confidence 999999998899999999999999 799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHhhhcccCCCCCCcCCCCCC-CCCcccHHHHHHHH-HHHHHHHHHHHHHHHhhhc--------CCCC-
Q 043360 891 IWVYSIMYMLGGLIMRMEFKDQEPVTNPPARR-TKSLLDKVMWKHTA-VQVLCQVGVFLIFQFAGQV--------IPGM- 959 (1108)
Q Consensus 891 l~~nli~~~l~~l~la~e~~~~~l~~~~P~~~-~~~lis~~~~~~i~-~~~~~~~~v~~~~~~~~~~--------~~~~- 959 (1108)
||+|+++|++|+++|++|+|++++|++||+.+ .++++++.+++.++ ..|++++++.++.++.... .++.
T Consensus 782 L~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 861 (997)
T TIGR01106 782 LCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLR 861 (997)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccc
Confidence 99999999999999999999999999999985 67999998876654 4476776655554432110 1110
Q ss_pred --------C------------------ccccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHH
Q 043360 960 --------N------------------RDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQV 1013 (1108)
Q Consensus 960 --------~------------------~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~ 1013 (1108)
+ ...++|++|++++++|++|.++||+ .+.++|+..+.|++++.++++.+++++
T Consensus 862 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~-~~~~~f~~~~~n~~l~~~~~~~~~l~~ 940 (997)
T TIGR01106 862 VQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKT-RRNSVFQQGMKNKILIFGLFEETALAA 940 (997)
T ss_pred cccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhcc-CcccccccCCcCHHHHHHHHHHHHHHH
Confidence 0 0146899999999999999999999 456778644899999999998888887
Q ss_pred HHHH--HhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043360 1014 LVVE--FATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSF 1057 (1108)
Q Consensus 1014 ~~v~--~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~ 1057 (1108)
++++ +++.+|++.++++.+|+++++++++.+++.++.|++.+++
T Consensus 941 ~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 941 FLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6654 5799999999999999999999999999999999887654
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-124 Score=1185.94 Aligned_cols=792 Identities=18% Similarity=0.238 Sum_probs=671.4
Q ss_pred CHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccC---CCCC
Q 043360 198 GPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQ---GPKD 271 (1108)
Q Consensus 198 g~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~---~~~~ 271 (1108)
..+++++.|+++ .+|||++|+++|+++ |++++++++++|+.+++||++++.++|+++++++++.++... +...
T Consensus 31 ~~~~v~~~l~~~-~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~ 109 (903)
T PRK15122 31 SLEETLANLNTH-RQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEET 109 (903)
T ss_pred CHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccc
Confidence 678899999999 479999999999999 999999999999999999999999999999999999875421 2223
Q ss_pred CcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEEC------CEEEEEEccccccCcEEEEcCCCccC
Q 043360 272 GWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRS------GREQLIAVSNLLKGDVVRLAKGDRVP 345 (1108)
Q Consensus 272 ~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRd------G~~~~I~~~dLvvGDIV~l~~Gd~IP 345 (1108)
+|.+++.|+++++++.+++.++++++++..++|. +..+.+++|+|| |++++|+++||||||+|.|++||+||
T Consensus 110 ~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~--~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IP 187 (903)
T PRK15122 110 DLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALK--AMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIP 187 (903)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEe
Confidence 6999999999999999999999999999999998 677789999999 48999999999999999999999999
Q ss_pred cceEEEecCceeeeec-ccCCCCC---CC-----------------------CCeeeecceEeeceEEEEEEEeccccHH
Q 043360 346 GDGLVVNSDGLMLDDV-LNSEIDP---DR-----------------------NPFLFSGSKVMEGHGTMLLISVGGNIAS 398 (1108)
Q Consensus 346 aDgill~g~~l~VdeS-LTGES~p---~~-----------------------~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~ 398 (1108)
|||++++|++|.|||| |||||.| .. +|++|+||.|.+|+++++|++||.+|++
T Consensus 188 aDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~ 267 (903)
T PRK15122 188 ADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYF 267 (903)
T ss_pred eeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHh
Confidence 9999999999999999 9999999 21 2789999999999999999999999999
Q ss_pred HHHHHHH---------------HHHHH----HHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCccc
Q 043360 399 GQVLRSN---------------LSLAV----TVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQG 459 (1108)
Q Consensus 399 g~i~~~~---------------~~~~~----~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (1108)
|++.+.+ +...+ ..++.+++++.++. ..+
T Consensus 268 gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~--------------------------------~~~ 315 (903)
T PRK15122 268 GSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT--------------------------------KGD 315 (903)
T ss_pred hHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc--------------------------------cCC
Confidence 9999887 11111 11111111111111 115
Q ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECC
Q 043360 460 KISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGE 539 (1108)
Q Consensus 460 ~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~ 539 (1108)
+...+..++++++++||||||++++++++.++++| +++|++||+++++|+||++|+||||||||||+|+|+|.+++..+
T Consensus 316 ~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m-ak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~ 394 (903)
T PRK15122 316 WLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM-ARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVS 394 (903)
T ss_pred HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH-HHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCC
Confidence 66788999999999999999999999999999999 99999999999999999999999999999999999999987432
Q ss_pred cccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEE
Q 043360 540 KDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKI 619 (1108)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~ 619 (1108)
. .. .+++ +..+.+++. .+...+||+|.||++++.+.+.+ ..+..++.++.+||+|.||+|+++++.
T Consensus 395 ~-~~-------~~~~---l~~a~l~s~-~~~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v~~~ 460 (903)
T PRK15122 395 G-RK-------DERV---LQLAWLNSF-HQSGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVVVED 460 (903)
T ss_pred C-CC-------hHHH---HHHHHHhCC-CCCCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEEEEc
Confidence 2 11 1222 222222211 12347899999999999887653 233567889999999999999999987
Q ss_pred cCCCcceeEEEEEeccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCcch-------hhh
Q 043360 620 NGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVS-------EIK 691 (1108)
Q Consensus 620 ~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~-------~~~ 691 (1108)
.+++ +++++|||||.|+++|++... +|+.+++ ++.++++.+.+++++.+|+|++++|||+++.. +..
T Consensus 461 ~~~~----~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~ 535 (903)
T PRK15122 461 AQGQ----HLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTAD 535 (903)
T ss_pred CCCc----EEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccccccccc
Confidence 5555 789999999999999998754 6777888 78889999999999999999999999987521 235
Q ss_pred ccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHH
Q 043360 692 ENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAK 767 (1108)
Q Consensus 692 E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~ 767 (1108)
|+||+|+|++++ |||++++|++||++||+|+|+||||+.||.+||+++||.. ..+++|++++.++++++.+.
T Consensus 536 e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~~~~~~el~~~ 611 (903)
T PRK15122 536 ERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIEAMDDAALARE 611 (903)
T ss_pred ccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhhhCCHHHHHHH
Confidence 789999999999 9999999999999999999999999999999999999963 46899999999999999999
Q ss_pred hcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHH
Q 043360 768 LDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPIL 845 (1108)
Q Consensus 768 ~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li 845 (1108)
+++++||||++|+||+++|+.||++|++|||+|| |+||+||||+|||||||| +|+|+||++||+||+ +|+.|++++
T Consensus 612 v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGD-GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 612 VEERTVFAKLTPLQKSRVLKALQANGHTVGFLGD-GINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred hhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECC-CchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHH
Confidence 9999999999999999999999999999999999 999999999999999999 899999999999999 999999999
Q ss_pred HhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCC
Q 043360 846 KLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKS 925 (1108)
Q Consensus 846 ~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~ 925 (1108)
++||++|+|++|+++|.++.|+..++..+++.++..+.|++++|+||+|+++|. |+++|++|+|++++| +||++++.+
T Consensus 690 ~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~ 767 (903)
T PRK15122 690 IKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAK 767 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChh
Confidence 999999999999999999999998888888777777789999999999999995 999999999999999 999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCc--cccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHH
Q 043360 926 LLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNR--DIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLM 1003 (1108)
Q Consensus 926 lis~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~~~~--~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~ 1003 (1108)
++++.+++..+..+++..+.+++ +++.... +... ...+|..|.+++++|+++.+++|+.+ .++ |.|++.+.
T Consensus 768 ~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~-~~~----~~~~~~~~ 840 (903)
T PRK15122 768 NIGRFMLWIGPTSSIFDITTFAL-MWFVFAA-NSVEMQALFQSGWFIEGLLSQTLVVHMLRTQK-IPF----IQSTAALP 840 (903)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-HHHHhcc-CcHhhhhhhHHHHHHHHHHHHHHHHHhhCcCC-CCc----CcchHHHH
Confidence 99998886444444433333333 2221111 1101 12457889999999999999999842 233 45666666
Q ss_pred HHHHHHHHHHHHH--HH--hHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043360 1004 VFLIVIAAQVLVV--EF--ATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSFLD 1059 (1108)
Q Consensus 1004 ~i~~~~~~~~~~v--~~--~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~~~ 1059 (1108)
.++++++++++++ ++ ++.+|++.++++.+|+++++++++.+++.++.|.+..+.+.
T Consensus 841 ~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~~ 900 (903)
T PRK15122 841 VLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRFG 900 (903)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 6666777766554 44 68999999999999999999999999988888865444443
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-123 Score=1185.38 Aligned_cols=782 Identities=22% Similarity=0.328 Sum_probs=669.6
Q ss_pred HHHHhhhhHHHHHHHHHHHhhccccccCCC--CCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEE
Q 043360 240 LLKASNNFNILLLLVAAALSFVTGTIEQGP--KDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVV 317 (1108)
Q Consensus 240 l~~~~~~~~~i~lli~ails~~~~~~~~~~--~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~Vi 317 (1108)
+++||+++++++|++++++++++++.+++. ..+|++++.|+++++++..++.++++++++.+++|. +..+.+++|+
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~--~~~~~~~~Vi 78 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALK--EYESEHAKVL 78 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCceEEE
Confidence 478999999999999999999998765332 247999999999999999999999999999999998 6778899999
Q ss_pred ECCEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---C-------------CCCeeeecceE
Q 043360 318 RSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---D-------------RNPFLFSGSKV 380 (1108)
Q Consensus 318 RdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~-------------~~~~l~~Gt~v 380 (1108)
|||++++|+++||||||||.|++||+|||||++++|++|.|||| |||||.| . .+|++|+||.+
T Consensus 79 Rdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v 158 (917)
T TIGR01116 79 RDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLV 158 (917)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEE
Confidence 99999999999999999999999999999999999988999999 9999999 1 13899999999
Q ss_pred eeceEEEEEEEeccccHHHHHHHHH----------------HHHHH----HHHHHHHHHHHHHHhccCCCCCCCcccccc
Q 043360 381 MEGHGTMLLISVGGNIASGQVLRSN----------------LSLAV----TVLIALVALIRLLWRKHSGDDHELPELKGN 440 (1108)
Q Consensus 381 ~~G~~~~~Vv~tG~~T~~g~i~~~~----------------~~~~~----~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~ 440 (1108)
.+|+++++|++||.+|++|++.+.+ ++..+ .+++++++++....... .. ....|.
T Consensus 159 ~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~--~~-~~~~~~-- 233 (917)
T TIGR01116 159 VAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFND--PA-LGGGWI-- 233 (917)
T ss_pred ecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cc-ccchhH--
Confidence 9999999999999999999988776 11111 11122222111111000 00 000110
Q ss_pred ccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEc
Q 043360 441 VSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICID 520 (1108)
Q Consensus 441 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~D 520 (1108)
..+...+..++++++++||||||+++++++++++++| ++++++||+++++|+||++|+||+|
T Consensus 234 -----------------~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m-~~~~ilvk~~~~iE~lg~v~~ic~D 295 (917)
T TIGR01116 234 -----------------QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKM-AKKNAIVRKLPSVETLGCTTVICSD 295 (917)
T ss_pred -----------------HHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHH-HHCCcEecCcHHHHhccCceEEEec
Confidence 1445667788899999999999999999999999999 9999999999999999999999999
Q ss_pred ccCcccccceEEEEEEECCcc-------------cCCCcc--h-------hhhHHHHHHHHHHhccccc---c------c
Q 043360 521 VTGGLVCNRVDVSKFCIGEKD-------------VNNDVA--S-------EINQAVLQALERGIGASVL---V------P 569 (1108)
Q Consensus 521 KTGTLT~n~m~v~~~~~~~~~-------------~~~~~~--~-------~~~~~~~~~l~~~~~~~~~---~------~ 569 (1108)
||||||+|+|+|.+++..+.. |..... . ...+...+++..+.+||.. . .
T Consensus 296 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~ 375 (917)
T TIGR01116 296 KTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVY 375 (917)
T ss_pred CCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCce
Confidence 999999999999999976531 111000 0 0012233344444445543 1 1
Q ss_pred ccCCChhHHHHHHHHHHcCCChhh----------------hcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEe
Q 043360 570 EISLWPTTDWLVSWAKSRSLNVEF----------------VDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWS 633 (1108)
Q Consensus 570 ~~~g~p~e~ALl~~a~~~g~~~~~----------------~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~K 633 (1108)
...|||+|.||++++.+.|++... .++++++++++||||+||||+|+++.+ ++ +++|+|
T Consensus 376 ~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~----~~~~~K 450 (917)
T TIGR01116 376 EKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TG----NKLFVK 450 (917)
T ss_pred eeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-Cc----EEEEEc
Confidence 235899999999999998876542 245678999999999999999999864 33 889999
Q ss_pred ccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHh-CCCeEEEEEEecCcc------------hhhhccCceeeE
Q 043360 634 GTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMED-SGLRPIAFACGQTEV------------SEIKENGLHLLA 699 (1108)
Q Consensus 634 GA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~-~GlR~L~~A~k~l~~------------~~~~E~~l~llG 699 (1108)
||||.|+++|++++..+|..+++ ++.++++++.+++|++ +|+|||++|||+++. .+.+|+||+|+|
T Consensus 451 GApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG 530 (917)
T TIGR01116 451 GAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIG 530 (917)
T ss_pred CChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEE
Confidence 99999999999988877888999 8889999999999999 999999999999852 145689999999
Q ss_pred EEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCC--ccccchhhhhhcCHHHHHHHhcccce
Q 043360 700 LAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESN--DIALEGEQFRELNSTERMAKLDSMTL 773 (1108)
Q Consensus 700 ~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~--~~vi~G~~l~~l~~~~~~~~~~~~~V 773 (1108)
++++ |++++++|+.||++||+++|+|||+.+||.++|+++||..++.. ..+++|++++.+.++++.+...+..|
T Consensus 531 l~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v 610 (917)
T TIGR01116 531 VVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVL 610 (917)
T ss_pred EeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeE
Confidence 9999 99999999999999999999999999999999999999864321 35899999999999999999999999
Q ss_pred ecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhh
Q 043360 774 MGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCA 851 (1108)
Q Consensus 774 ~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~ 851 (1108)
|||++|+||.++|+.+|+.|++|+|+|| |+||+||||+|||||||| +|+|+||++||+++. +|++|+++++|||++
T Consensus 611 ~ar~~P~~K~~iV~~lq~~g~~va~iGD-G~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~ 688 (917)
T TIGR01116 611 FSRVEPSHKSELVELLQEQGEIVAMTGD-GVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAI 688 (917)
T ss_pred EEecCHHHHHHHHHHHHhcCCeEEEecC-CcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999 899999999999999 699999999999999
Q ss_pred hhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHH
Q 043360 852 YCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVM 931 (1108)
Q Consensus 852 ~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~ 931 (1108)
|+|++++++|.+++|+..+++.+++.++..+.|++++|++|+|+++|.+|++++++++|++++|++||+.++++++++++
T Consensus 689 ~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~ 768 (917)
T TIGR01116 689 YNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWL 768 (917)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHH
Confidence 99999999999999999999999998887789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc---CCC--------C------------CccccchhhhHHHHHHHHHHHhhhhhccc
Q 043360 932 WKHTAVQVLCQVGVFLIFQFAGQV---IPG--------M------------NRDIRKAMTFNSFTLCQVFNQFDAMRLLK 988 (1108)
Q Consensus 932 ~~~i~~~~~~~~~v~~~~~~~~~~---~~~--------~------------~~~~~~T~~F~~~v~~q~~~~~~~r~~~~ 988 (1108)
|+.|+.+|++++++.++.+++... +.+ . ....++|++|++++++|+||.+++|+. +
T Consensus 769 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~ 847 (917)
T TIGR01116 769 FFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-D 847 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-c
Confidence 999999999999875544432111 100 0 124568999999999999999999994 5
Q ss_pred ccccc-cccchhHHHHHHHHHHHHHHHH--HHHhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 043360 989 KAVLP-VVLKKFNVLMVFLIVIAAQVLV--VEFATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIA 1054 (1108)
Q Consensus 989 ~~~f~-~~~~n~~~~~~i~~~~~~~~~~--v~~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~ 1054 (1108)
.++|+ ++++|+++++++++++++|+++ +++++.+|++.|+++.+|+++++++++.+++.++.|++.
T Consensus 848 ~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 848 QSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred ccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67776 7789999999999999999887 567899999999999999999999999999999999764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-122 Score=1165.49 Aligned_cols=774 Identities=19% Similarity=0.257 Sum_probs=649.1
Q ss_pred CHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCcc
Q 043360 198 GPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWH 274 (1108)
Q Consensus 198 g~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~~ 274 (1108)
..+++.+.|+++. +|||++|+++|+++ |++++++++++|+.+++||++|++++++++++++++.+ .|.
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~~~ 123 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------DLF 123 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------cHH
Confidence 6788999999996 69999999999999 99999999999999999999999999999999999887 699
Q ss_pred hhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEEC------CEEEEEEccccccCcEEEEcCCCccCcce
Q 043360 275 DGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRS------GREQLIAVSNLLKGDVVRLAKGDRVPGDG 348 (1108)
Q Consensus 275 ~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRd------G~~~~I~~~dLvvGDIV~l~~Gd~IPaDg 348 (1108)
+++.|+++++++.+++.++++++++.+++|. +..+.+++|+|| |++++|+++||||||+|.|++||+|||||
T Consensus 124 ~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~--~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg 201 (902)
T PRK10517 124 AAGVIALMVAISTLLNFIQEARSTKAADALK--AMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADL 201 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeE
Confidence 9999999999999999999999999999998 677889999999 78999999999999999999999999999
Q ss_pred EEEecCceeeeec-ccCCCCC---C-------------CCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH------
Q 043360 349 LVVNSDGLMLDDV-LNSEIDP---D-------------RNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN------ 405 (1108)
Q Consensus 349 ill~g~~l~VdeS-LTGES~p---~-------------~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~------ 405 (1108)
+|++|++|.|||| |||||.| . .+|++|+||.|.+|+++++|++||.+|.+|++.+.+
T Consensus 202 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~ 281 (902)
T PRK10517 202 RILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSE 281 (902)
T ss_pred EEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCC
Confidence 9999998999999 9999999 1 236899999999999999999999999999999887
Q ss_pred ----------HHHH----HHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHH
Q 043360 406 ----------LSLA----VTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVV 471 (1108)
Q Consensus 406 ----------~~~~----~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~il 471 (1108)
++.. ..+++.+++++.++.. .++...+..+++++
T Consensus 282 ~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~--------------------------------~~~~~~l~~alsv~ 329 (902)
T PRK10517 282 PNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK--------------------------------GDWWEAALFALSVA 329 (902)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc--------------------------------CCHHHHHHHHHHHH
Confidence 2211 1111222221111110 14567889999999
Q ss_pred HHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhh
Q 043360 472 AIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEIN 551 (1108)
Q Consensus 472 v~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 551 (1108)
+++|||+||++++++++.++++| +++|++||+++++|+||++|+||||||||||+|+|+|.+++.... .+ .
T Consensus 330 V~~~Pe~LP~~vt~~la~g~~~m-ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~-~~-------~ 400 (902)
T PRK10517 330 VGLTPEMLPMIVTSTLARGAVKL-SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG-KT-------S 400 (902)
T ss_pred HHHcccHHHHHHHHHHHHHHHHH-HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC-CC-------H
Confidence 99999999999999999999999 999999999999999999999999999999999999998752111 00 1
Q ss_pred HHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEE
Q 043360 552 QAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMH 631 (1108)
Q Consensus 552 ~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~ 631 (1108)
+ +++..+.+++.. ....+||+|.|+++++...+ .....+.|+.++.+||||+||+|+++++..++. ++++
T Consensus 401 ~---~ll~~a~l~~~~-~~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~----~~~~ 470 (902)
T PRK10517 401 E---RVLHSAWLNSHY-QTGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEH----HQLI 470 (902)
T ss_pred H---HHHHHHHhcCCc-CCCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCe----EEEE
Confidence 2 233333332211 23468999999999987543 122345688899999999999999999876554 7899
Q ss_pred EeccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCcch-----hhhccCceeeEEEec--
Q 043360 632 WSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVS-----EIKENGLHLLALAGL-- 703 (1108)
Q Consensus 632 ~KGA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~-----~~~E~~l~llG~i~i-- 703 (1108)
+|||||.|+++|+++.. +|...++ ++.++++.+..++++++|+|++++|||+++.. ...|+|++|+|++++
T Consensus 471 ~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~D 549 (902)
T PRK10517 471 CKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLD 549 (902)
T ss_pred EeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhC
Confidence 99999999999998754 6677888 78888999999999999999999999987521 124789999999999
Q ss_pred --ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhh
Q 043360 704 --REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADD 781 (1108)
Q Consensus 704 --r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~ 781 (1108)
|||++++|++|+++||+|+|+||||+.||.+||+++||. ...+++|++++.++++++.+.++++.||||++|+|
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~----~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~ 625 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD----AGEVLIGSDIETLSDDELANLAERTTLFARLTPMH 625 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHH
Confidence 999999999999999999999999999999999999995 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhh
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFT 859 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i 859 (1108)
|.++|+.+|++|++|+|+|| |+||+||||+|||||||| +|+|+||++||+||+ +|+.|++++++||++|+|++|++
T Consensus 626 K~~IV~~Lq~~G~vVam~GD-GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i 703 (902)
T PRK10517 626 KERIVTLLKREGHVVGFMGD-GINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYI 703 (902)
T ss_pred HHHHHHHHHHCCCEEEEECC-CcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 999999999999999999 899999999999999 99999999999999999999999
Q ss_pred hhHhhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHHHHHHHHHH
Q 043360 860 KLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQV 939 (1108)
Q Consensus 860 ~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i~~~~ 939 (1108)
+|.++.|+..++..+++.++..+.|++++|+||+|+++| +|++++++|+|++++|++||+ |+...+.+.++...+..+
T Consensus 704 ~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r-~~~~~~~~~~~~~g~~~~ 781 (902)
T PRK10517 704 KMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQR-WNPADLGRFMVFFGPISS 781 (902)
T ss_pred HHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCC-CCHHHHHHHHHHHHHHHH
Confidence 999999999998888887776668999999999999999 789999999999999999887 333334444433333333
Q ss_pred HHHHHHHHHHHHhhhcCCCCCc----cccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHHHH
Q 043360 940 LCQVGVFLIFQFAGQVIPGMNR----DIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLV 1015 (1108)
Q Consensus 940 ~~~~~v~~~~~~~~~~~~~~~~----~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~~ 1015 (1108)
++..+.++++++ . ++... ...++..|..++++|+++.+++|+.+ . +++.|++.+..++.+++++++.
T Consensus 782 ~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~-~----~~~~~~~~~~~~~~~~~~~~~~ 852 (902)
T PRK10517 782 IFDILTFCLMWW-V---FHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRR-I----PFIQSRAAWPLMIMTLIVMAVG 852 (902)
T ss_pred HHHHHHHHHHHH-H---ccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCC-C----CcccchHHHHHHHHHHHHHHHH
Confidence 222222222211 1 12111 12334559999999999999999832 1 4557778888887777777655
Q ss_pred H--H--HhHhhhccccCC--hhHHHHHHHHHHHHHHHHHHHHHH
Q 043360 1016 V--E--FATSLAGYQRLN--GMQWGICFILAVLPWGIHRAVNFI 1053 (1108)
Q Consensus 1016 v--~--~~~~~f~~~~l~--~~~wl~~i~~~~~~l~~~~i~k~~ 1053 (1108)
+ + +++.+|++.+++ +..|+++++++.. ++.++.|.+
T Consensus 853 ~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~ 894 (902)
T PRK10517 853 IALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGF 894 (902)
T ss_pred HHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHH
Confidence 4 3 468899999999 6788887777666 445666543
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-122 Score=1163.36 Aligned_cols=784 Identities=19% Similarity=0.269 Sum_probs=651.9
Q ss_pred CCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCc
Q 043360 197 GGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGW 273 (1108)
Q Consensus 197 gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~ 273 (1108)
.+.+++++.|+++. +||+++|+++|+++ |++++++++++|+.++++|++|++++|+++++++++.+ .|
T Consensus 18 ~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~--------~~ 88 (867)
T TIGR01524 18 MGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD--------DL 88 (867)
T ss_pred CCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------hH
Confidence 37899999999985 69999999999999 99999999999999999999999999999999999887 69
Q ss_pred chhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEE------CCEEEEEEccccccCcEEEEcCCCccCcc
Q 043360 274 HDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVR------SGREQLIAVSNLLKGDVVRLAKGDRVPGD 347 (1108)
Q Consensus 274 ~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViR------dG~~~~I~~~dLvvGDIV~l~~Gd~IPaD 347 (1108)
.+++.|+++++++.+++.++++++++..++|+ +..+.+++|+| ||++++|+++||||||+|.|++||+||||
T Consensus 89 ~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~--~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 89 EATVIIALMVLASGLLGFIQESRAERAAYALK--NMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHh--hhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 99999999999999999999999999999998 66778999999 99999999999999999999999999999
Q ss_pred eEEEecCceeeeec-ccCCCCC---C-------------CCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH-----
Q 043360 348 GLVVNSDGLMLDDV-LNSEIDP---D-------------RNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN----- 405 (1108)
Q Consensus 348 gill~g~~l~VdeS-LTGES~p---~-------------~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~----- 405 (1108)
|++++|+++.|||| |||||.| . .+|++|+||.|.+|+++++|++||.+|.+|++.+.+
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 246 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRG 246 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCC
Confidence 99999998999999 9999999 1 136899999999999999999999999999999877
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHh
Q 043360 406 ----------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAV 475 (1108)
Q Consensus 406 ----------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~v 475 (1108)
++..+..+++++..+.++.... ...++...+..++++++++|
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~----------------------------~~~~~~~~~~~al~l~v~~i 298 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL----------------------------MKGDWLEAFLFALAVAVGLT 298 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHheehHHH----------------------------hcCCHHHHHHHHHHHHHHhC
Confidence 2211111111111111111110 00145678899999999999
Q ss_pred cCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHH
Q 043360 476 QHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVL 555 (1108)
Q Consensus 476 P~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 555 (1108)
|||||++++++++.++++| +++|++||+++++|+||++|+||||||||||+|+|+|.+++.... .+ .++
T Consensus 299 P~~Lp~~vt~~la~g~~~m-ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~-~~-------~~~-- 367 (867)
T TIGR01524 299 PEMLPMIVSSNLAKGAINM-SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG-ET-------SER-- 367 (867)
T ss_pred cchHHHHHHHHHHHHHHHH-HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC-CC-------HHH--
Confidence 9999999999999999999 999999999999999999999999999999999999999863221 00 122
Q ss_pred HHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEecc
Q 043360 556 QALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGT 635 (1108)
Q Consensus 556 ~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA 635 (1108)
++..+.+++.. +...+||+|.|+++++.+.. ....+..++.++.+||||+||+|+++++..++. +++++|||
T Consensus 368 -~l~~a~l~~~~-~~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~----~~~~~KGa 439 (867)
T TIGR01524 368 -VLKMAWLNSYF-QTGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEV----TRLICKGA 439 (867)
T ss_pred -HHHHHHHhCCC-CCCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCce----EEEEEeCc
Confidence 23323222211 23357999999999987542 223345788899999999999999999865543 78999999
Q ss_pred HHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCcch-----hhhccCceeeEEEec----cc
Q 043360 636 ASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVS-----EIKENGLHLLALAGL----RE 705 (1108)
Q Consensus 636 ~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~-----~~~E~~l~llG~i~i----r~ 705 (1108)
||.|+++|+++.. +|...++ ++.++++++.+++++.+|+|++++|||+++.. +..|++|+|+|++++ ||
T Consensus 440 ~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~ 518 (867)
T TIGR01524 440 VEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKE 518 (867)
T ss_pred HHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCch
Confidence 9999999997754 6777788 77788999999999999999999999987521 124789999999999 99
Q ss_pred chHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHH
Q 043360 706 EIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLL 785 (1108)
Q Consensus 706 ~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~i 785 (1108)
|++++|++|+++||+|+|+||||+.||.+||+++||.. ..+++|.+++.++++++.+.+++++||||++|+||+++
T Consensus 519 ~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~i 594 (867)
T TIGR01524 519 STKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRI 594 (867)
T ss_pred hHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999964 36899999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHh
Q 043360 786 VQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQL 863 (1108)
Q Consensus 786 V~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l 863 (1108)
|+.+|++|++|+|+|| |+||+||||+|||||||| +|+|+||++||+||+ +|+.|++++++||++|+|++|+++|++
T Consensus 595 V~~lq~~G~vVam~GD-GvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~l 672 (867)
T TIGR01524 595 IGLLKKAGHTVGFLGD-GINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTA 672 (867)
T ss_pred HHHHHhCCCEEEEECC-CcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999 899999999999999 999999999999999999999999999
Q ss_pred hcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHHHHHHHHHHHHHH
Q 043360 864 TGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQV 943 (1108)
Q Consensus 864 ~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~ 943 (1108)
+.|+..++..+++.++..+.|++++|++|+|+++| +|++++++|+|++++|++||+ ++.+.+.+.++...+..+++..
T Consensus 673 s~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~~~~~~~g~~~~~~~~ 750 (867)
T TIGR01524 673 SSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMGRFMLCIGPVSSIFDI 750 (867)
T ss_pred hhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHHHHHHHHHHHHHHHHH
Confidence 99999988888877776678999999999999999 799999999999999986665 6665544444333222222222
Q ss_pred HHHHHHHHhhhcCCCC-CccccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHHHHHH--H--
Q 043360 944 GVFLIFQFAGQVIPGM-NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVE--F-- 1018 (1108)
Q Consensus 944 ~v~~~~~~~~~~~~~~-~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~~v~--~-- 1018 (1108)
+.++++++.+. ..+. .....+|..|..++++|+++.+++|+.+ . ++|.|++.+.++++++++++++++ +
T Consensus 751 ~~~~~~~~~~~-~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~-~----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~ 824 (867)
T TIGR01524 751 ATFLLMWFVFS-ANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEK-I----PFIQSRAAAPVMIATLLVMALGIIIPFSP 824 (867)
T ss_pred HHHHHHHHHhc-ccchhhhhHHHHHHHHHHHHHHHHHHHhhCcCC-C----CcCcchHHHHHHHHHHHHHHHHHHhchhh
Confidence 22222222111 0010 0122468889999999999999999832 1 445688888888888888877664 3
Q ss_pred hHhhhccccC--ChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 043360 1019 ATSLAGYQRL--NGMQWGICFILAVLPWGIHRAVNFIAD 1055 (1108)
Q Consensus 1019 ~~~~f~~~~l--~~~~wl~~i~~~~~~l~~~~i~k~~~~ 1055 (1108)
++.+|++.++ ++..|++++.+++. ++.++.|.+..
T Consensus 825 ~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~ 861 (867)
T TIGR01524 825 LGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYI 861 (867)
T ss_pred hhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 3789999987 55678877776665 55666665433
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-112 Score=1099.04 Aligned_cols=756 Identities=17% Similarity=0.208 Sum_probs=616.1
Q ss_pred CCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHh
Q 043360 211 EHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLL 287 (1108)
Q Consensus 211 ~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~ 287 (1108)
.+||+++|+++|++. |+++.++ +++|+.+++++.+|+++++++++++++..+ .|++++.|+++++++.
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~--------~~~~~~~i~~i~~~~~ 207 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLDE--------YYYYSLCIVFMSSTSI 207 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHHHH
Confidence 469999999999999 9998864 799999999999999999999988887654 4889999999888888
Q ss_pred chhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEc--CCCccCcceEEEecCceeeeec-ccC
Q 043360 288 TFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLA--KGDRVPGDGLVVNSDGLMLDDV-LNS 364 (1108)
Q Consensus 288 ~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~--~Gd~IPaDgill~g~~l~VdeS-LTG 364 (1108)
.++.++++++.++++++. ..+..++|+|||++++|+++||||||||.|+ +||+|||||+|++|+ |.|||| |||
T Consensus 208 ~~~~~~~~k~~~~L~~~~---~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTG 283 (1054)
T TIGR01657 208 SLSVYQIRKQMQRLRDMV---HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTG 283 (1054)
T ss_pred HHHHHHHHHHHHHHHHhh---cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccC
Confidence 888888888777777665 2467999999999999999999999999999 999999999999996 699999 999
Q ss_pred CCCC---C------------------CCCeeeecceEee-------ceEEEEEEEeccccHHHHHHHHH-----------
Q 043360 365 EIDP---D------------------RNPFLFSGSKVME-------GHGTMLLISVGGNIASGQVLRSN----------- 405 (1108)
Q Consensus 365 ES~p---~------------------~~~~l~~Gt~v~~-------G~~~~~Vv~tG~~T~~g~i~~~~----------- 405 (1108)
||.| . +++++|+||.|.+ |.+.++|++||.+|..|++.+.+
T Consensus 284 ES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~ 363 (1054)
T TIGR01657 284 ESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFY 363 (1054)
T ss_pred CccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchH
Confidence 9999 1 1357999999985 78999999999999999999887
Q ss_pred -----HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchh
Q 043360 406 -----LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMP 480 (1108)
Q Consensus 406 -----~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lp 480 (1108)
+..+++++.+++.++.++.... ...++...++.++++++++|||+||
T Consensus 364 ~~~~~~~~~l~~~a~i~~i~~~~~~~~----------------------------~~~~~~~~~l~~l~iiv~~vP~~LP 415 (1054)
T TIGR01657 364 KDSFKFILFLAVLALIGFIYTIIELIK----------------------------DGRPLGKIILRSLDIITIVVPPALP 415 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------cCCcHHHHHHHHHHHHHhhcCchHH
Confidence 2222222222222111111111 0125678899999999999999999
Q ss_pred HHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCC-Ccchhhh-HHHHHHH
Q 043360 481 FVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNN-DVASEIN-QAVLQAL 558 (1108)
Q Consensus 481 l~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~-~~~~~~~-~~~~~~l 558 (1108)
++++++++++++|| +|+|++||++.++|++|++|+||||||||||+|+|+|.+++..+..... ....+.. .....++
T Consensus 416 ~~~ti~l~~~~~rL-~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (1054)
T TIGR01657 416 AELSIGINNSLARL-KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITH 494 (1054)
T ss_pred HHHHHHHHHHHHHH-HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHH
Confidence 99999999999999 9999999999999999999999999999999999999999875432110 0000000 1111122
Q ss_pred HHHhccccc---ccccCCChhHHHHHHHHHHcCCC-----hhh----------hcccceeeeeecCCCCCCeEEEEEEEc
Q 043360 559 ERGIGASVL---VPEISLWPTTDWLVSWAKSRSLN-----VEF----------VDQNLSVLEHRKLSSNNKVCGVLVKIN 620 (1108)
Q Consensus 559 ~~~~~~~~~---~~~~~g~p~e~ALl~~a~~~g~~-----~~~----------~~~~~~il~~~~F~s~rkrmsviv~~~ 620 (1108)
....+||.. .....|||+|.||++++...... ... ...++++++.+||+|++|||||+++..
T Consensus 495 ~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~ 574 (1054)
T TIGR01657 495 KALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTN 574 (1054)
T ss_pred HHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEc
Confidence 222235543 33568999999999987422100 000 024688999999999999999999976
Q ss_pred CCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCc----------chhh
Q 043360 621 GGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE----------VSEI 690 (1108)
Q Consensus 621 ~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~----------~~~~ 690 (1108)
++++ +++|+|||||.|+++|++. +.++++.+.+++|+.+|+|||++|||+++ .++.
T Consensus 575 ~~~~---~~~~~KGApE~Il~~c~~~-----------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~ 640 (1054)
T TIGR01657 575 DERS---PDAFVKGAPETIQSLCSPE-----------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDA 640 (1054)
T ss_pred CCCe---EEEEEECCHHHHHHHcCCc-----------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHH
Confidence 5443 8899999999999999852 23577889999999999999999999985 2466
Q ss_pred hccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCC--------------------
Q 043360 691 KENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES-------------------- 746 (1108)
Q Consensus 691 ~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~-------------------- 746 (1108)
.|+||+|+|+++| ||+++++|+.|++|||+|+|+||||+.||.+||++|||++++.
T Consensus 641 ~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~ 720 (1054)
T TIGR01657 641 VESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKF 720 (1054)
T ss_pred HhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEE
Confidence 8999999999999 9999999999999999999999999999999999999975421
Q ss_pred -------------------------------Cccccchhhhhh---cCHHHHHHHhcccceecccCHhhHHHHHHHHHhC
Q 043360 747 -------------------------------NDIALEGEQFRE---LNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEK 792 (1108)
Q Consensus 747 -------------------------------~~~vi~G~~l~~---l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~ 792 (1108)
..++++|++++. +.++++.++++++.||||++|+||.++|+.+|+.
T Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~ 800 (1054)
T TIGR01657 721 EVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL 800 (1054)
T ss_pred EecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC
Confidence 026889999876 4567899999999999999999999999999999
Q ss_pred CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhH
Q 043360 793 GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGL 870 (1108)
Q Consensus 793 g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i 870 (1108)
|++|+|||| |+||+||||+||||||||. +|++ .|||+++. +|++|+++|+|||+++.|++++++|.+.++++..
T Consensus 801 g~~V~m~GD-G~ND~~ALK~AdVGIam~~--~das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~ 876 (1054)
T TIGR01657 801 DYTVGMCGD-GANDCGALKQADVGISLSE--AEAS-VAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQF 876 (1054)
T ss_pred CCeEEEEeC-ChHHHHHHHhcCcceeecc--ccce-eecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999983 4665 89999998 9999999999999999999999999999998775
Q ss_pred HHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 043360 871 LITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQ 950 (1108)
Q Consensus 871 ~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~ 950 (1108)
+..++ ++....|++++|++|+|++++++++++|+.++|.+++|++||. .+++++.++..+++|+++++++.++.+
T Consensus 877 ~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~---~~l~~~~~~~si~~q~~i~~~~~~~~~ 951 (1054)
T TIGR01657 877 YSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP---SNLFSVYILTSVLIQFVLHILSQVYLV 951 (1054)
T ss_pred HHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC---ccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 54433 2344689999999999999999999999999999999999995 599999999999999999999888777
Q ss_pred Hhhhc--CC----C--C----CccccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHHH----
Q 043360 951 FAGQV--IP----G--M----NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVL---- 1014 (1108)
Q Consensus 951 ~~~~~--~~----~--~----~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~---- 1014 (1108)
+.... ++ . . .....+|++| .++..|.+..++++.. ..++.+++++|++++..++++++++++
T Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~ 1029 (1054)
T TIGR01657 952 FELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVLLLD 1029 (1054)
T ss_pred HHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHhhhC
Confidence 55432 22 1 1 0123358888 4555555555666663 455556999999999888877666653
Q ss_pred HHHHhHhhhccccCChhHHH
Q 043360 1015 VVEFATSLAGYQRLNGMQWG 1034 (1108)
Q Consensus 1015 ~v~~~~~~f~~~~l~~~~wl 1034 (1108)
.+++++.+|++.+++. .|-
T Consensus 1030 ~~~~l~~~~~~~~~~~-~~~ 1048 (1054)
T TIGR01657 1030 PHPLLGKILQIVPLPQ-EFR 1048 (1054)
T ss_pred CCHHHHhhheeeeCCH-HHH
Confidence 2367899999999985 443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-111 Score=1054.93 Aligned_cols=714 Identities=21% Similarity=0.258 Sum_probs=598.4
Q ss_pred CCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHhch
Q 043360 213 GIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTF 289 (1108)
Q Consensus 213 GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~~v 289 (1108)
|||++|+++|+++ |++++++ +++|+.++++|++|++++|+++++++++++ .|.+++.|+++++++..+
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~~i 71 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNATI 71 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHHHH
Confidence 8999999999999 9999854 567899999999999999999999999998 699999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC
Q 043360 290 PAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP 368 (1108)
Q Consensus 290 ~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p 368 (1108)
+.++++++++.+++|. +..+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.|||| |||||.|
T Consensus 72 ~~~qe~~a~~~~~~L~--~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~P 149 (755)
T TIGR01647 72 GFIEENKAGNAVEALK--QSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLP 149 (755)
T ss_pred HHHHHHHHHHHHHHHH--hhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccc
Confidence 9999999999999998 677889999999999999999999999999999999999999999997899999 9999999
Q ss_pred ---CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHhccCC
Q 043360 369 ---DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN----------------LSLAVTVLIALVALIRLLWRKHSG 429 (1108)
Q Consensus 369 ---~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~----------------~~~~~~~l~~i~l~~~~~~~~~~~ 429 (1108)
..++.+|+||.+.+|+++++|++||.+|.+|++.+.+ ++..+..+++++.++.++.....
T Consensus 150 V~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~- 228 (755)
T TIGR01647 150 VTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFG- 228 (755)
T ss_pred eEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 6789999999999999999999999999999998877 22222221111111111111100
Q ss_pred CCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhh
Q 043360 430 DDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGA 509 (1108)
Q Consensus 430 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E 509 (1108)
...++...+..++++++++|||+||++++++++.++++| +|+|+++|+++++|
T Consensus 229 --------------------------~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~-ak~gilvk~l~alE 281 (755)
T TIGR01647 229 --------------------------RGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAEL-AKKKAIVTRLTAIE 281 (755)
T ss_pred --------------------------cCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHH-HhCCeEEcccHHHH
Confidence 011567789999999999999999999999999999999 99999999999999
Q ss_pred cccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCC
Q 043360 510 TMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSL 589 (1108)
Q Consensus 510 ~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~ 589 (1108)
+||++|+||+|||||||+|+|+|.+++..+..++. + +++..+.+|+ +...+||+|.|+++++.+.+
T Consensus 282 ~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~-------~---~~l~~a~~~~---~~~~~~pi~~Ai~~~~~~~~- 347 (755)
T TIGR01647 282 ELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDK-------D---DVLLYAALAS---REEDQDAIDTAVLGSAKDLK- 347 (755)
T ss_pred hccCCcEEEecCCCccccCceEEEEEEecCCCCCH-------H---HHHHHHHHhC---CCCCCChHHHHHHHHHHHhH-
Confidence 99999999999999999999999999875432211 1 2333333332 24578999999999987643
Q ss_pred ChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHH
Q 043360 590 NVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKD 669 (1108)
Q Consensus 590 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~ 669 (1108)
..+..+++++.+||++.+|+|+++++.+++++ .++++|||||.|+++|++. ++.++++++.+++
T Consensus 348 ---~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~---~~~~~kGa~e~il~~c~~~----------~~~~~~~~~~~~~ 411 (755)
T TIGR01647 348 ---EARDGYKVLEFVPFDPVDKRTEATVEDPETGK---RFKVTKGAPQVILDLCDNK----------KEIEEKVEEKVDE 411 (755)
T ss_pred ---HHHhcCceEEEeccCCCCCeEEEEEEeCCCce---EEEEEeCChHHHHHhcCCc----------HHHHHHHHHHHHH
Confidence 23456788999999999999999998754232 6788999999999999753 2446778889999
Q ss_pred HHhCCCeEEEEEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC-
Q 043360 670 MEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP- 744 (1108)
Q Consensus 670 ~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~- 744 (1108)
++.+|+|++++|||+ .|++|+|+|++++ |||++++|++||++||+|+|+||||+.||.+||+++||.++
T Consensus 412 ~~~~G~rvl~vA~~~------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~ 485 (755)
T TIGR01647 412 LASRGYRALGVARTD------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI 485 (755)
T ss_pred HHhCCCEEEEEEEEc------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC
Confidence 999999999999974 4789999999999 99999999999999999999999999999999999999752
Q ss_pred CCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCcc
Q 043360 745 ESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCT 824 (1108)
Q Consensus 745 ~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gt 824 (1108)
.....+.+|.+.+.++++++.+.+++++||||++|+||+++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+
T Consensus 486 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD-GvNDapAL~~AdVGIAm~-~gt 563 (755)
T TIGR01647 486 YTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD-GVNDAPALKKADVGIAVA-GAT 563 (755)
T ss_pred cCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC-CcccHHHHHhCCeeEEec-CCc
Confidence 012234455566788999999999999999999999999999999999999999999 999999999999999999 899
Q ss_pred HHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHH
Q 043360 825 EMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGG 902 (1108)
Q Consensus 825 e~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~ 902 (1108)
|+||++||++|+ +|+.|++++++||++|+|++|+++|.++.|+..+++.+++.++.+ .|++++|++|+|+++|. ++
T Consensus 564 dvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~ 641 (755)
T TIGR01647 564 DAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TI 641 (755)
T ss_pred HHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hH
Confidence 999999999999 999999999999999999999999999999998877777666544 45999999999999996 69
Q ss_pred HhhhcccCCCCCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhc------CCC--CCccccchhhhHHHHH
Q 043360 903 LIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQV------IPG--MNRDIRKAMTFNSFTL 974 (1108)
Q Consensus 903 l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~~~~~------~~~--~~~~~~~T~~F~~~v~ 974 (1108)
+++++|++++. ++|..+ .+ ..++..++..|++.++..|.++++... ..+ ......+|++|..+++
T Consensus 642 ~~l~~~~~~~~---~~p~~~---~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~ 714 (755)
T TIGR01647 642 MTIAYDNVKPS---KLPQRW---NL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSI 714 (755)
T ss_pred hhccCCCCCCC---CCCCcc---ch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHH
Confidence 99999998753 444433 23 367777788888888776666544332 111 1234678999999999
Q ss_pred HHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHHHH
Q 043360 975 CQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLV 1015 (1108)
Q Consensus 975 ~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~~ 1015 (1108)
.|.++.+++|+ +...|+. ..+++.+++.++.+++..++
T Consensus 715 ~~~~~~~~~r~--~~~~~~~-~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 715 SGQATIFVTRT--HGFFWSE-RPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred HHHHHHheecc--CCCCccc-CCcHHHHHHHHHHHHHHHHH
Confidence 99999999998 3444543 36667666666665554443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-115 Score=1006.78 Aligned_cols=829 Identities=17% Similarity=0.257 Sum_probs=704.9
Q ss_pred HhhCCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhcccccc----
Q 043360 194 KEIGGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIE---- 266 (1108)
Q Consensus 194 ~~~gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~---- 266 (1108)
+|.-.+++|++++++|..+||+.+++.+|+++ |.+++|+..+-|..+.+|+++.+.++++++|+++++.....
T Consensus 39 ~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~ 118 (1019)
T KOG0203|consen 39 DHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTE 118 (1019)
T ss_pred cccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccC
Confidence 56779999999999999999999999999999 99999999999999999999999999999999987654311
Q ss_pred -CCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccC
Q 043360 267 -QGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVP 345 (1108)
Q Consensus 267 -~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IP 345 (1108)
..+.+..+-++.+..++++..++..+++.+..+-++..+ ...+..++|+|||+...+..+||||||+|.++-||+||
T Consensus 119 ~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~--~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVP 196 (1019)
T KOG0203|consen 119 DDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFK--NLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVP 196 (1019)
T ss_pred CCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHh--ccchhhheeeecceeEEechhhcccccceeeccCCccc
Confidence 112234455555555555555666666666666666665 77799999999999999999999999999999999999
Q ss_pred cceEEEecCceeeeec-ccCCCCC-------------CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH------
Q 043360 346 GDGLVVNSDGLMLDDV-LNSEIDP-------------DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN------ 405 (1108)
Q Consensus 346 aDgill~g~~l~VdeS-LTGES~p-------------~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~------ 405 (1108)
||.+++++.+|++|+| |||||+| +..|+.|.+|.+.+|.++++|++||.+|.+|+++...
T Consensus 197 ADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~ 276 (1019)
T KOG0203|consen 197 ADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDG 276 (1019)
T ss_pred ceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCC
Confidence 9999999999999999 9999999 5678999999999999999999999999999998877
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHh
Q 043360 406 ----------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAV 475 (1108)
Q Consensus 406 ----------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~v 475 (1108)
+..++..+.+...++.|..... ....++.++.+.+.++++.+
T Consensus 277 ~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~----------------------------~gy~~l~avv~~i~iivAnv 328 (1019)
T KOG0203|consen 277 KTPIAKEIEHFIHIITGVAIFLGISFFILALI----------------------------LGYEWLRAVVFLIGIIVANV 328 (1019)
T ss_pred CCcchhhhhchHHHHHHHHHHHHHHHHHHHHh----------------------------hcchhHHHhhhhheeEEecC
Confidence 2222222222221222211111 01267788888899999999
Q ss_pred cCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCc--------c
Q 043360 476 QHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDV--------A 547 (1108)
Q Consensus 476 P~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~--------~ 547 (1108)
|+||+..+|.++....+|| ++++++||++.+.|+||+.++||+|||||||+|+|+|.++|.+......+. .
T Consensus 329 PeGL~~tvTv~LtltakrM-a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~ 407 (1019)
T KOG0203|consen 329 PEGLLATVTVCLTLTAKRM-ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSF 407 (1019)
T ss_pred cCCccceehhhHHHHHHHH-hhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccc
Confidence 9999999999999999999 999999999999999999999999999999999999999999876443221 1
Q ss_pred hhhhHHHHHHHHHHhccccc------------ccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEE
Q 043360 548 SEINQAVLQALERGIGASVL------------VPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGV 615 (1108)
Q Consensus 548 ~~~~~~~~~~l~~~~~~~~~------------~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsv 615 (1108)
...++...+++..+.+|+.. .....||+.|.||++++...-.+...+|+.++.+...||||.+|..-.
T Consensus 408 ~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqls 487 (1019)
T KOG0203|consen 408 DKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLS 487 (1019)
T ss_pred cccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEE
Confidence 11233344455544445533 334689999999999999776677889999999999999999999988
Q ss_pred EEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCc--------
Q 043360 616 LVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTE-------- 686 (1108)
Q Consensus 616 iv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~-------- 686 (1108)
+.+..+. .+.++.+.+|||||.++++|+.+.- +|+..|+ ++.++.+++...++...|-|+++||++.++
T Consensus 488 ih~~~d~-~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~ 565 (1019)
T KOG0203|consen 488 IHETEDP-SDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGF 565 (1019)
T ss_pred EEecCCC-CCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCce
Confidence 8776542 1233889999999999999998876 8999999 999999999999999999999999999986
Q ss_pred -----chhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC-------------
Q 043360 687 -----VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP------------- 744 (1108)
Q Consensus 687 -----~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~------------- 744 (1108)
.-+..-.+|.|+|++++ |..+|+++..||.|||||+|+|||++.||++||++.||+..
T Consensus 566 ~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~ 645 (1019)
T KOG0203|consen 566 QFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLN 645 (1019)
T ss_pred EeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcC
Confidence 12345678999999999 99999999999999999999999999999999999998764
Q ss_pred ---------CCCccccchhhhhhcCHHHHHHHhcccc--eecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhC
Q 043360 745 ---------ESNDIALEGEQFRELNSTERMAKLDSMT--LMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEA 813 (1108)
Q Consensus 745 ---------~~~~~vi~G~~l~~l~~~~~~~~~~~~~--V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~A 813 (1108)
+....|++|.++..++++++++++.+.. ||||.||+||+.||+..|+.|.+|+++|| |+||+||||+|
T Consensus 646 ~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGD-GVNDsPALKKA 724 (1019)
T KOG0203|consen 646 IPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGD-GVNDSPALKKA 724 (1019)
T ss_pred CcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCC-CcCCChhhccc
Confidence 1246789999999999999999998776 99999999999999999999999999999 99999999999
Q ss_pred CccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHH
Q 043360 814 DVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLI 891 (1108)
Q Consensus 814 dVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll 891 (1108)
|||||||++|+|++|+|||++|+ ||++|+..+.+||-+|+|++|.|.|.++.|+..+.+.+++.++..+.|+..+++|
T Consensus 725 DIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL 804 (1019)
T KOG0203|consen 725 DIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTIL 804 (1019)
T ss_pred ccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhh
Confidence 99999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHhhhcccCCCCCCcCCCCC-CCCCcccHHHHHH-HHHHHHHHHHHHHHHHHhhhcCCCC----------
Q 043360 892 WVYSIMYMLGGLIMRMEFKDQEPVTNPPAR-RTKSLLDKVMWKH-TAVQVLCQVGVFLIFQFAGQVIPGM---------- 959 (1108)
Q Consensus 892 ~~nli~~~l~~l~la~e~~~~~l~~~~P~~-~~~~lis~~~~~~-i~~~~~~~~~v~~~~~~~~~~~~~~---------- 959 (1108)
.+++..|..|+++||+|+|+.++|+|+|+. +++.++|.+++.. ..-.|++|++..|+.+|.....-|+
T Consensus 805 ~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~ 884 (1019)
T KOG0203|consen 805 CIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLRE 884 (1019)
T ss_pred hhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHH
Confidence 999999999999999999999999999997 7889999887654 4445788888888777653321111
Q ss_pred ----------------C---------ccccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHHH
Q 043360 960 ----------------N---------RDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVL 1014 (1108)
Q Consensus 960 ----------------~---------~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~ 1014 (1108)
. +...+|..|.+++.+|+++.+.|++ ++.++|+.-++||.+++++++.+++..+
T Consensus 885 ~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KT-RRnSlfqqGmrN~vl~f~v~~e~~La~f 963 (1019)
T KOG0203|consen 885 DWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKT-RRNSIFQQGMRNKVLIFAVIFETCLACF 963 (1019)
T ss_pred hhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhc-chhHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 0 3456888999999999999999988 4567888558999999988877666555
Q ss_pred H--HHHhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043360 1015 V--VEFATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSF 1057 (1108)
Q Consensus 1015 ~--v~~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~ 1057 (1108)
+ ++.....++..|+.+..|+..+..+++.++.+++.|++.|++
T Consensus 964 l~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 964 LCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRY 1008 (1019)
T ss_pred HhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhC
Confidence 4 455678899999999889988999999999999999988765
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-108 Score=1065.59 Aligned_cols=789 Identities=15% Similarity=0.153 Sum_probs=614.9
Q ss_pred CCCCCCCCchH---HHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHH
Q 043360 226 NTIKPNHAREF---FLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLE 302 (1108)
Q Consensus 226 N~~~~~~~~s~---~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~ 302 (1108)
|++...+...+ ++.+|+||++++|+||++++++++++++++.++ +...+++++++++..+.++++|++++++.+
T Consensus 4 N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~---~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 4 NKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYR---GTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCc---cHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 66666665544 799999999999999999999999998876653 222334444444566778888888888876
Q ss_pred HHHHHhhcCcEEEEEEC-CEEEEEEccccccCcEEEEcCCCccCcceEEEecCc----eeeeec-ccCCCCC---C----
Q 043360 303 KKQWEEKNKLEVKVVRS-GREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDG----LMLDDV-LNSEIDP---D---- 369 (1108)
Q Consensus 303 ~l~~~~~~~~~v~ViRd-G~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~----l~VdeS-LTGES~p---~---- 369 (1108)
+.+ +..++|+|+ |++++++|+||+|||+|+|++||+|||||+++++++ |+|||| |||||+| .
T Consensus 81 ~~n-----~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 81 EVN-----NRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHh-----CcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 555 789999997 899999999999999999999999999999999765 899999 9999999 0
Q ss_pred --------------------------------------------CCCeeeecceEee-ceEEEEEEEeccccHHHHHHHH
Q 043360 370 --------------------------------------------RNPFLFSGSKVME-GHGTMLLISVGGNIASGQVLRS 404 (1108)
Q Consensus 370 --------------------------------------------~~~~l~~Gt~v~~-G~~~~~Vv~tG~~T~~g~i~~~ 404 (1108)
.+|++++||.+++ |.+.|+|++||.+|+++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~ 235 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQ 235 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCC
Confidence 1268999999999 8999999999999999876533
Q ss_pred H-------------HHHH----HHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHH
Q 043360 405 N-------------LSLA----VTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSA 467 (1108)
Q Consensus 405 ~-------------~~~~----~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 467 (1108)
. +..+ .+++++++.++..++.. ......|+.... .+.......+...+..+
T Consensus 236 ~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~----~~~~~~~yl~~~--------~~~~~~~~~~~~~~~~~ 303 (1057)
T TIGR01652 236 APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWND----AHGKDLWYIRLD--------VSERNAAANGFFSFLTF 303 (1057)
T ss_pred CcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheec----ccCCCccceecC--------cccccchhHHHHHHHHH
Confidence 2 2221 12222222222222221 111113432100 00000011345577888
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHH------hhhhhcc----ccccCCCchhhcccCceEEEEcccCcccccceEEEEEEE
Q 043360 468 LTVVAIAVQHGMPFVITVSLFFWN------DKLLINH----HAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCI 537 (1108)
Q Consensus 468 i~ilv~~vP~~Lpl~vti~l~~~~------~~m~~~~----~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~ 537 (1108)
+.+++.++|++|+..++++++.++ .+| .++ +++||+++++|+||++++||+|||||||+|+|++++|++
T Consensus 304 ~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m-~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i 382 (1057)
T TIGR01652 304 LILFSSLIPISLYVSLELVKSVQAYFINSDLQM-YHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSI 382 (1057)
T ss_pred HHHHhhhcceeeeehHHHHHHHHHHHHhhhhhh-hccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEE
Confidence 999999999999999999999998 788 764 599999999999999999999999999999999999999
Q ss_pred CCcccCCCcc----------h-------------------------------hhhHHHHHHHHHHhcccccc-----c--
Q 043360 538 GEKDVNNDVA----------S-------------------------------EINQAVLQALERGIGASVLV-----P-- 569 (1108)
Q Consensus 538 ~~~~~~~~~~----------~-------------------------------~~~~~~~~~l~~~~~~~~~~-----~-- 569 (1108)
++..|..... . +.++...+++....+||... .
T Consensus 383 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~ 462 (1057)
T TIGR01652 383 AGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGP 462 (1057)
T ss_pred CCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCC
Confidence 8776542100 0 00112334444444476541 1
Q ss_pred ----ccCCChhHHHHHHHHHHcCCChhh--------------hcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEE
Q 043360 570 ----EISLWPTTDWLVSWAKSRSLNVEF--------------VDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMH 631 (1108)
Q Consensus 570 ----~~~g~p~e~ALl~~a~~~g~~~~~--------------~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~ 631 (1108)
+.++||+|.||+++|+..|+.+.. ...+|++++++||+|+||||||+++.++++ +++|
T Consensus 463 ~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~----~~l~ 538 (1057)
T TIGR01652 463 EEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGR----IKLL 538 (1057)
T ss_pred CceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCe----EEEE
Confidence 236899999999999999986542 234689999999999999999999987665 8899
Q ss_pred EeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcc------------------------
Q 043360 632 WSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEV------------------------ 687 (1108)
Q Consensus 632 ~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~------------------------ 687 (1108)
+|||||.|+++|++.. ++.++++++++++|+.+|+|||++|||+++.
T Consensus 539 ~KGA~e~il~~~~~~~---------~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~ 609 (1057)
T TIGR01652 539 CKGADTVIFKRLSSGG---------NQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKL 609 (1057)
T ss_pred EeCcHHHHHHHhhccc---------hhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 9999999999997510 2446788899999999999999999999861
Q ss_pred ---hhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCC-------------
Q 043360 688 ---SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESN------------- 747 (1108)
Q Consensus 688 ---~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~------------- 747 (1108)
.+.+|+||+|+|++++ |+||+++|+.|++|||+|||+|||+.+||.+||++|||++++..
T Consensus 610 ~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~ 689 (1057)
T TIGR01652 610 DVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATR 689 (1057)
T ss_pred HHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhH
Confidence 1357899999999999 99999999999999999999999999999999999999975321
Q ss_pred --------------------------ccccchhhhhhcCHH----HHHHHhcccc--eecccCHhhHHHHHHHHHhC-CC
Q 043360 748 --------------------------DIALEGEQFRELNST----ERMAKLDSMT--LMGSCLADDKLLLVQSVKEK-GH 794 (1108)
Q Consensus 748 --------------------------~~vi~G~~l~~l~~~----~~~~~~~~~~--V~ar~sP~~K~~iV~~lq~~-g~ 794 (1108)
.++++|++++.+.++ ++.+++.+++ ||||++|+||+++|+.+|+. |+
T Consensus 690 ~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~ 769 (1057)
T TIGR01652 690 SVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGK 769 (1057)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCC
Confidence 248999999866543 4566777776 99999999999999999998 99
Q ss_pred EEEEEeCCCCCCHHHHhhCCccEecCCCccHH--HHhccchhhcccccHHHHH-HhhhhhhhhhhhhhhhHhhcchhhHH
Q 043360 795 VVAFFGGSSTRDTPALKEADVGITEENKCTEM--ARECSDIVISAVGSLLPIL-KLGRCAYCNIQKFTKLQLTGCASGLL 871 (1108)
Q Consensus 795 ~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~--ak~aADivl~~f~~I~~li-~~GR~~~~~i~k~i~~~l~~ni~~i~ 871 (1108)
+|+|||| |+||+||||+|||||+ +.|+|. |+++||+++.+|++|.+++ .|||++|+|+++++.|.+++|++.++
T Consensus 770 ~vl~iGD-G~ND~~mlk~AdVGIg--i~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~ 846 (1057)
T TIGR01652 770 TTLAIGD-GANDVSMIQEADVGVG--ISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAI 846 (1057)
T ss_pred eEEEEeC-CCccHHHHhhcCeeeE--ecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999999995 457773 8899999999999999996 89999999999999999999999999
Q ss_pred HHHHHHHhcC---CCchhHHHHHHHHHHHhHHHHHhhhc--ccCCCCCCcCCCC----CCCCCcccHHHHHHHHHHHHHH
Q 043360 872 ITLVTTLILE---ESPITSIQLIWVYSIMYMLGGLIMRM--EFKDQEPVTNPPA----RRTKSLLDKVMWKHTAVQVLCQ 942 (1108)
Q Consensus 872 ~~~~~~~~~~---~~pl~~~qll~~nli~~~l~~l~la~--e~~~~~l~~~~P~----~~~~~lis~~~~~~i~~~~~~~ 942 (1108)
+++++.++++ .+++++++++|+|+++|++|++++|. +++++++|.++|+ ++++++++.+.|+.|++.|+||
T Consensus 847 ~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~ 926 (1057)
T TIGR01652 847 IQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQ 926 (1057)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHH
Confidence 9999988765 45789999999999999999999976 5567888999998 6778999999999999999999
Q ss_pred HHHHHHHHHhhhcCCC--C-----CccccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHHHH
Q 043360 943 VGVFLIFQFAGQVIPG--M-----NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLV 1015 (1108)
Q Consensus 943 ~~v~~~~~~~~~~~~~--~-----~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~~ 1015 (1108)
++++|++.+....... . +.....+++|++.++...+..+ .....|+|+.++++++++++.+++
T Consensus 927 ~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~wt~~~~~~~~~S~~~~~~~ 996 (1057)
T TIGR01652 927 SLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIA----------LEINRWNWISLITIWGSILVWLIF 996 (1057)
T ss_pred HHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHH----------HHHhHhHHHHHHHHHHHHHHHHHH
Confidence 9998877654432211 0 1222334445444444433321 122245666677777777776655
Q ss_pred HHHhHhhh---------ccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 043360 1016 VEFATSLA---------GYQRLNGMQWGICFILAVLPWGIHRAVNFIADSFLDRS 1061 (1108)
Q Consensus 1016 v~~~~~~f---------~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~~~~~ 1061 (1108)
..+...++ ...--++.+|+.++++.++++++.++++.+.+.|++..
T Consensus 997 ~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~ 1051 (1057)
T TIGR01652 997 VIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPD 1051 (1057)
T ss_pred HHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 44333222 11223678999999999999999999999988887644
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-106 Score=1033.79 Aligned_cols=803 Identities=14% Similarity=0.151 Sum_probs=608.8
Q ss_pred CCCCCCCC---chHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHH
Q 043360 226 NTIKPNHA---REFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLE 302 (1108)
Q Consensus 226 N~~~~~~~---~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~ 302 (1108)
|.+...|. .-+++++|+||++..|+||++++++++++.+++.++ +...+++++++++..+.++++||+++++.+
T Consensus 90 N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~---~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~ 166 (1178)
T PLN03190 90 NSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGR---GASILPLAFVLLVTAVKDAYEDWRRHRSDR 166 (1178)
T ss_pred CeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCc---chHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 66655444 456789999999999999999999999999877664 444556666666666778888888888876
Q ss_pred HHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEecCc----eeeeec-ccCCCCC---------
Q 043360 303 KKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDG----LMLDDV-LNSEIDP--------- 368 (1108)
Q Consensus 303 ~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~----l~VdeS-LTGES~p--------- 368 (1108)
+.+ +..++|+|+|++++++|+||+|||+|+|++||.|||||+++++++ |+|||+ |||||+|
T Consensus 167 ~~N-----~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~ 241 (1178)
T PLN03190 167 IEN-----NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQET 241 (1178)
T ss_pred hhc-----CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchh
Confidence 555 788999999999999999999999999999999999999999654 799999 9999999
Q ss_pred ---------------------------------------CCCCeeeecceEeec-eEEEEEEEeccccHHHHHHHHH---
Q 043360 369 ---------------------------------------DRNPFLFSGSKVMEG-HGTMLLISVGGNIASGQVLRSN--- 405 (1108)
Q Consensus 369 ---------------------------------------~~~~~l~~Gt~v~~G-~~~~~Vv~tG~~T~~g~i~~~~--- 405 (1108)
..+|++++||.++++ .++|+|+|||++|++.+.....
T Consensus 242 ~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N~~~~~~K 321 (1178)
T PLN03190 242 LSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAPSK 321 (1178)
T ss_pred hhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhcCCCCCCC
Confidence 345789999999998 5999999999999977654321
Q ss_pred --------------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHH
Q 043360 406 --------------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVV 471 (1108)
Q Consensus 406 --------------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~il 471 (1108)
+.++..++++++.++...+......+.....|+..............+..........|..++.++
T Consensus 322 ~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~ 401 (1178)
T PLN03190 322 RSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVF 401 (1178)
T ss_pred ccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHH
Confidence 111222222232233222221100111111232110000000000000000001233455556788
Q ss_pred HHHhcCchhHHHHHHHHHHHhhhhhccc----------cccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcc
Q 043360 472 AIAVQHGMPFVITVSLFFWNDKLLINHH----------AKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKD 541 (1108)
Q Consensus 472 v~~vP~~Lpl~vti~l~~~~~~m~~~~~----------ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~ 541 (1108)
..+||++|+..+++.....+..| .+++ +.||+++.+|+||+|++||+|||||||+|+|+|++|+++|..
T Consensus 402 ~~~IPISL~Vtleivk~~qa~~I-~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~ 480 (1178)
T PLN03190 402 QIMIPISLYISMELVRVGQAYFM-IRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVD 480 (1178)
T ss_pred HhhcceeeeeeHHHHHHHHHHHH-HhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEE
Confidence 89999999999999997777777 6655 789999999999999999999999999999999999998766
Q ss_pred cCCCc---------------c------h------------------hhhHHHHHHHHHHhcccccc--------------
Q 043360 542 VNNDV---------------A------S------------------EINQAVLQALERGIGASVLV-------------- 568 (1108)
Q Consensus 542 ~~~~~---------------~------~------------------~~~~~~~~~l~~~~~~~~~~-------------- 568 (1108)
|+... . . +..+.+.+++...++||.+.
T Consensus 481 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~ 560 (1178)
T PLN03190 481 YSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKL 560 (1178)
T ss_pred cccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccc
Confidence 64210 0 0 00112334555444477651
Q ss_pred -cccCCChhHHHHHHHHHHcCC------------ChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEecc
Q 043360 569 -PEISLWPTTDWLVSWAKSRSL------------NVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGT 635 (1108)
Q Consensus 569 -~~~~g~p~e~ALl~~a~~~g~------------~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA 635 (1108)
.+.++||+|.||+++|+++|+ +..+.+.+|++++++||+|+||||||+++.+++. +++|+|||
T Consensus 561 ~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~----~~l~~KGA 636 (1178)
T PLN03190 561 MDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKT----VKVFVKGA 636 (1178)
T ss_pred eEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCc----EEEEEecC
Confidence 145669999999999999998 4456677899999999999999999999987665 89999999
Q ss_pred HHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcc---------------------------h
Q 043360 636 ASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEV---------------------------S 688 (1108)
Q Consensus 636 ~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~---------------------------~ 688 (1108)
||.|+++|++..+ ++.++++++++++||++|+||||+|||+++. .
T Consensus 637 ~e~il~~~~~~~~--------~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~ 708 (1178)
T PLN03190 637 DTSMFSVIDRSLN--------MNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVA 708 (1178)
T ss_pred cHHHHHhhccccc--------chhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhH
Confidence 9999999986533 2446788999999999999999999999851 1
Q ss_pred hhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCC------------------
Q 043360 689 EIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES------------------ 746 (1108)
Q Consensus 689 ~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~------------------ 746 (1108)
+.+|+||+++|++++ |++++++|+.|++|||+|||+|||+.+||++||++|||++++.
T Consensus 709 ~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~ 788 (1178)
T PLN03190 709 SNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLE 788 (1178)
T ss_pred HhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHH
Confidence 357899999999999 9999999999999999999999999999999999999986521
Q ss_pred -----------------------------CccccchhhhhhcCH----HHHHHHhcccc--eecccCHhhHHHHHHHHHh
Q 043360 747 -----------------------------NDIALEGEQFRELNS----TERMAKLDSMT--LMGSCLADDKLLLVQSVKE 791 (1108)
Q Consensus 747 -----------------------------~~~vi~G~~l~~l~~----~~~~~~~~~~~--V~ar~sP~~K~~iV~~lq~ 791 (1108)
..++++|++++.+.+ +++.+++.+++ ||||++|+||+++|+.+|+
T Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~ 868 (1178)
T PLN03190 789 DALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKN 868 (1178)
T ss_pred HHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHh
Confidence 126889999988765 56777888887 7999999999999999999
Q ss_pred C-CCEEEEEeCCCCCCHHHHhhCCccEecCCCccH--HHHhccchhhcccccHHHH-HHhhhhhhhhhhhhhhhHhhcch
Q 043360 792 K-GHVVAFFGGSSTRDTPALKEADVGITEENKCTE--MARECSDIVISAVGSLLPI-LKLGRCAYCNIQKFTKLQLTGCA 867 (1108)
Q Consensus 792 ~-g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte--~ak~aADivl~~f~~I~~l-i~~GR~~~~~i~k~i~~~l~~ni 867 (1108)
. +++|+|||| |+||+||||+||||| |+.|+| .|+.+|||++.+|+.|.++ +.|||+.|+|+.++++|.+|+|+
T Consensus 869 ~~~~vtlaIGD-GaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~ 945 (1178)
T PLN03190 869 RTSDMTLAIGD-GANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNA 945 (1178)
T ss_pred cCCcEEEEECC-CcchHHHHHhcCeee--eecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 8 689999999 999999999999999 666777 4779999999999999999 68999999999999999999999
Q ss_pred hhHHHHHHHHHhcCCC---chhHHHHHHHHHHHhHHHHHhhhc-ccC-CCCCCcCCCC----CCCCCcccHHHHHHHHHH
Q 043360 868 SGLLITLVTTLILEES---PITSIQLIWVYSIMYMLGGLIMRM-EFK-DQEPVTNPPA----RRTKSLLDKVMWKHTAVQ 938 (1108)
Q Consensus 868 ~~i~~~~~~~~~~~~~---pl~~~qll~~nli~~~l~~l~la~-e~~-~~~l~~~~P~----~~~~~lis~~~~~~i~~~ 938 (1108)
+.++++||++++++++ .++.+.+.++|++++++|.+++|. |+. +++.+.+.|. ++++..++.+.|+.|++.
T Consensus 946 ~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~ 1025 (1178)
T PLN03190 946 VFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMID 1025 (1178)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHH
Confidence 9999999999987754 567899999999999999999964 444 4555666675 567789999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHHHHHHH
Q 043360 939 VLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEF 1018 (1108)
Q Consensus 939 ~~~~~~v~~~~~~~~~~~~~~~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~~v~~ 1018 (1108)
|+||++++|++.++.......+.....++++.+.++...+.. ......|+|+.++++++++++.+++..+
T Consensus 1026 ~i~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i----------~~~~~~wt~~~~~~i~~Si~~~~i~~~~ 1095 (1178)
T PLN03190 1026 TLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHL----------AMDIIRWNWITHAAIWGSIVATFICVIV 1095 (1178)
T ss_pred HHHHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHH----------HHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999998876544321112222223344443333332221 1122235666666666666655544322
Q ss_pred hHhh--------hccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 043360 1019 ATSL--------AGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSFLDRSL 1062 (1108)
Q Consensus 1019 ~~~~--------f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~~~~~~ 1062 (1108)
...+ +....-++.+|+.++++.++++++++++|.+.+.+++...
T Consensus 1096 ~~~~~~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~ 1147 (1178)
T PLN03190 1096 IDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDV 1147 (1178)
T ss_pred HHhcccchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 2111 1111236789999999999999999999999988887553
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-99 Score=936.62 Aligned_cols=789 Identities=16% Similarity=0.161 Sum_probs=620.4
Q ss_pred CCCCCCCC---chHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHH
Q 043360 226 NTIKPNHA---REFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLE 302 (1108)
Q Consensus 226 N~~~~~~~---~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~ 302 (1108)
|.+...|. .-+.+++|+||++..|+||++.+++++++ +++.++ |...+++++++.+..+.++++||+++++..
T Consensus 35 N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~---~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~ 110 (1151)
T KOG0206|consen 35 NRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNP---YTTLVPLLFVLGITAIKDAIEDYRRHKQDK 110 (1151)
T ss_pred CeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCc---cceeeceeeeehHHHHHHHHhhhhhhhccH
Confidence 77776544 45679999999999999999999999999 666554 666777777777778889999999999987
Q ss_pred HHHHHhhcCcEEEEEECCE-EEEEEccccccCcEEEEcCCCccCcceEEEecCc----eeeeec-ccCCCCC--------
Q 043360 303 KKQWEEKNKLEVKVVRSGR-EQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDG----LMLDDV-LNSEIDP-------- 368 (1108)
Q Consensus 303 ~l~~~~~~~~~v~ViRdG~-~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~----l~VdeS-LTGES~p-------- 368 (1108)
+.+ +.++.|.|++. +++..|++|+|||+|++..++.+|||.+|++++. |+|+++ |+||+++
T Consensus 111 ~iN-----~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~ 185 (1151)
T KOG0206|consen 111 EVN-----NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALEC 185 (1151)
T ss_pred Hhh-----cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehhh
Confidence 666 88999999644 8999999999999999999999999999999875 999999 9999998
Q ss_pred ------------------------------------------CCCCeeeecceEeece-EEEEEEEeccccHHHHHHHHH
Q 043360 369 ------------------------------------------DRNPFLFSGSKVMEGH-GTMLLISVGGNIASGQVLRSN 405 (1108)
Q Consensus 369 ------------------------------------------~~~~~l~~Gt~v~~G~-~~~~Vv~tG~~T~~g~i~~~~ 405 (1108)
.+++++++||+++++. +.|+|+++|++|++++.....
T Consensus 186 ~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n~~~~ 265 (1151)
T KOG0206|consen 186 TSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQNSGKP 265 (1151)
T ss_pred hhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHhcCCC
Confidence 2346799999999985 999999999999998865443
Q ss_pred --------------HHHHHHHHHHHHHHHHHHHhccCCCC-CC-CccccccccccchhhhhhhhccCcccHHHHHHHHHH
Q 043360 406 --------------LSLAVTVLIALVALIRLLWRKHSGDD-HE-LPELKGNVSVGTVMKIFERFLLKPQGKISILVSALT 469 (1108)
Q Consensus 406 --------------~~~~~~~l~~i~l~~~~~~~~~~~~~-~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 469 (1108)
+...+.++.+++++.......+...+ .. .+.|+..... ........|+.++.
T Consensus 266 ~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~f~t~~i 333 (1151)
T KOG0206|consen 266 PSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE------------AAYAGFVHFLTFII 333 (1151)
T ss_pred ccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch------------HHHHHHHHHHHHHh
Confidence 22222222222222222222211000 11 1223221110 11134566778888
Q ss_pred HHHHHhcCchhHHHHHHHHHHHhhh------h---hccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCc
Q 043360 470 VVAIAVQHGMPFVITVSLFFWNDKL------L---INHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEK 540 (1108)
Q Consensus 470 ilv~~vP~~Lpl~vti~l~~~~~~m------~---~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~ 540 (1108)
++...+|.+|...+.+...+.+.-+ | .+..+.+|+++..|+||+|++|++|||||||+|.|++++|.++|.
T Consensus 334 l~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~ 413 (1151)
T KOG0206|consen 334 LYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGT 413 (1151)
T ss_pred hhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCc
Confidence 9999999777776666665555322 1 356789999999999999999999999999999999999999998
Q ss_pred ccCCCcc---------h---------------------------hhhHHHHHHHHHHhccccc----------ccccCCC
Q 043360 541 DVNNDVA---------S---------------------------EINQAVLQALERGIGASVL----------VPEISLW 574 (1108)
Q Consensus 541 ~~~~~~~---------~---------------------------~~~~~~~~~l~~~~~~~~~----------~~~~~g~ 574 (1108)
.|+.... + ...+...+++....+||++ ..+++.+
T Consensus 414 ~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~S 493 (1151)
T KOG0206|consen 414 SYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAES 493 (1151)
T ss_pred ccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCC
Confidence 7754210 0 0122333444444557776 2467899
Q ss_pred hhHHHHHHHHHHcCCChh------------hhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhh
Q 043360 575 PTTDWLVSWAKSRSLNVE------------FVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNM 642 (1108)
Q Consensus 575 p~e~ALl~~a~~~g~~~~------------~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~ 642 (1108)
|+|.||++.|+++|+.+. +..++|+++++++|+|.|||||||||.++|. +++|||||+.+|+++
T Consensus 494 PDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~----i~LycKGADsvI~er 569 (1151)
T KOG0206|consen 494 PDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGR----ILLYCKGADSVIFER 569 (1151)
T ss_pred CcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCc----EEEEEcCcchhhHhh
Confidence 999999999999998653 2246799999999999999999999999986 999999999999999
Q ss_pred cccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCc---------------------------chhhhccCc
Q 043360 643 CSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE---------------------------VSEIKENGL 695 (1108)
Q Consensus 643 c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~---------------------------~~~~~E~~l 695 (1108)
+... + +...++.++++++||.+||||||+|||+++ .++.+|+||
T Consensus 570 L~~~----~-----~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L 640 (1151)
T KOG0206|consen 570 LSKN----G-----EKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDL 640 (1151)
T ss_pred hhhc----c-----hHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcc
Confidence 9861 1 356788899999999999999999999997 256789999
Q ss_pred eeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCC--------------------------
Q 043360 696 HLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-------------------------- 745 (1108)
Q Consensus 696 ~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~-------------------------- 745 (1108)
+++|.++| |+||||+|+.|++||||+||+|||+.+||++||.+|++++++
T Consensus 641 ~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~ 720 (1151)
T KOG0206|consen 641 ILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKET 720 (1151)
T ss_pred hhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHH
Confidence 99999999 999999999999999999999999999999999999998761
Q ss_pred -------------------CCccccchhhhhhcCHH----HHHHHhcccc--eecccCHhhHHHHHHHHHhC-CCEEEEE
Q 043360 746 -------------------SNDIALEGEQFRELNST----ERMAKLDSMT--LMGSCLADDKLLLVQSVKEK-GHVVAFF 799 (1108)
Q Consensus 746 -------------------~~~~vi~G~~l~~l~~~----~~~~~~~~~~--V~ar~sP~~K~~iV~~lq~~-g~~Va~i 799 (1108)
...+|+||+.+....++ .+.++...|+ +|||+||.||+.+|+.+++. +.++++|
T Consensus 721 l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAI 800 (1151)
T KOG0206|consen 721 LLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAI 800 (1151)
T ss_pred HHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEe
Confidence 35688899988776554 3445666666 99999999999999999855 8999999
Q ss_pred eCCCCCCHHHHhhCCccEecCCCccHH--HHhccchhhcccccHHHH-HHhhhhhhhhhhhhhhhHhhcchhhHHHHHHH
Q 043360 800 GGSSTRDTPALKEADVGITEENKCTEM--ARECSDIVISAVGSLLPI-LKLGRCAYCNIQKFTKLQLTGCASGLLITLVT 876 (1108)
Q Consensus 800 GD~G~ND~~aLk~AdVGIamg~~gte~--ak~aADivl~~f~~I~~l-i~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~ 876 (1108)
|| |+||++|+++|||||+ ++|.|. |..+||+.+.+|+.+.++ +.||||.|.|+.+++.|.+|||+.+.++.||+
T Consensus 801 GD-GANDVsMIQ~AhVGVG--IsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy 877 (1151)
T KOG0206|consen 801 GD-GANDVSMIQEAHVGVG--ISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWY 877 (1151)
T ss_pred eC-CCccchheeeCCcCee--eccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99 9999999999999996 344444 669999999999999999 79999999999999999999999999999999
Q ss_pred HHhcC---CCchhHHHHHHHHHHHhHHHHHhhhc--ccCCCCCCcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHH
Q 043360 877 TLILE---ESPITSIQLIWVYSIMYMLGGLIMRM--EFKDQEPVTNPPA----RRTKSLLDKVMWKHTAVQVLCQVGVFL 947 (1108)
Q Consensus 877 ~~~~~---~~pl~~~qll~~nli~~~l~~l~la~--e~~~~~l~~~~P~----~~~~~lis~~~~~~i~~~~~~~~~v~~ 947 (1108)
.++++ +..++.+++.++|++++++|.+++|. .+.+++.+.+.|. ++++..++++.|+.|++.|+||++++|
T Consensus 878 ~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~F 957 (1151)
T KOG0206|consen 878 QFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIF 957 (1151)
T ss_pred hhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeee
Confidence 99876 56789999999999999999999986 3446677777776 567789999999999999999999999
Q ss_pred HHHHhhhcC--CCC-----CccccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHHHHHHHhH
Q 043360 948 IFQFAGQVI--PGM-----NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFAT 1020 (1108)
Q Consensus 948 ~~~~~~~~~--~~~-----~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~~v~~~~ 1020 (1108)
++.+..... ... +.....+.+|++.|+ ..+.+. ....-+|+|+-++.+++++++.+++..+.+
T Consensus 958 f~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vi-----vv~~~i-----aL~~~ywT~i~~i~i~gSi~~~f~f~~iy~ 1027 (1151)
T KOG0206|consen 958 FLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVI-----VVNLKI-----ALETSYWTWINHIVIWGSILLWFVFLFIYS 1027 (1151)
T ss_pred eeeHhhheeeeeccCCCcCChhhccceEEEEEEE-----EEEeee-----eeeehheeHHHHHHHHHHHHHHHHHHHHHh
Confidence 877654321 111 122222333333332 222221 233456777778888888888877765554
Q ss_pred h-hhcc------------ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 043360 1021 S-LAGY------------QRLNGMQWGICFILAVLPWGIHRAVNFIADSFLDRS 1061 (1108)
Q Consensus 1021 ~-~f~~------------~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~~~~~ 1061 (1108)
. .... .--++.+|+.+++..+.++++++++|.+.+.+++..
T Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~ 1081 (1151)
T KOG0206|consen 1028 ELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTD 1081 (1151)
T ss_pred ccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcH
Confidence 2 1111 113678999999999999999999999998887754
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-91 Score=819.03 Aligned_cols=776 Identities=19% Similarity=0.256 Sum_probs=611.4
Q ss_pred CCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHh
Q 043360 211 EHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLL 287 (1108)
Q Consensus 211 ~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~ 287 (1108)
.+||+..++.+|+.. |.+..+ .++.++++.++..+|+.++..++.++|..-++ ++.+.+|++......
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~Y--------~~YA~cI~iisv~Si 228 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLFQAFSVALWLADSY--------YYYAFCIVIISVYSI 228 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeee-cccHHHHHHHhccchHHHHHhHHhhhhhcccc--------hhhhhHHHHHHHHHH
Confidence 579999999988888 998887 46999999999999999999999999988774 556677777666677
Q ss_pred chhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcC-CCccCcceEEEecCceeeeec-ccCC
Q 043360 288 TFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAK-GDRVPGDGLVVNSDGLMLDDV-LNSE 365 (1108)
Q Consensus 288 ~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~-Gd~IPaDgill~g~~l~VdeS-LTGE 365 (1108)
+.+.++..++++.++++. .....|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|++ .|||| ||||
T Consensus 229 ~~sv~e~r~qs~rlr~mv---~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLTGE 304 (1140)
T KOG0208|consen 229 VLSVYETRKQSIRLRSMV---KFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLTGE 304 (1140)
T ss_pred HHHHHHHHHHHHHHHHHh---cCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-EeecccccCC
Confidence 778888888888888876 34578999999999999999999999999998 999999999999986 99999 9999
Q ss_pred CCC----------------------CCCCeeeecceEee------ceEEEEEEEeccccHHHHHHHHH------------
Q 043360 366 IDP----------------------DRNPFLFSGSKVME------GHGTMLLISVGGNIASGQVLRSN------------ 405 (1108)
Q Consensus 366 S~p----------------------~~~~~l~~Gt~v~~------G~~~~~Vv~tG~~T~~g~i~~~~------------ 405 (1108)
|.| ...+++|+||++++ |.+.++|++||.+|..|++.+.+
T Consensus 305 SVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyr 384 (1140)
T KOG0208|consen 305 SVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYR 384 (1140)
T ss_pred cccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHH
Confidence 999 35689999999986 45999999999999999999998
Q ss_pred -HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHH
Q 043360 406 -LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVIT 484 (1108)
Q Consensus 406 -~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vt 484 (1108)
...++..+.+++++. +++.... ....+.+....+++++.++.+.+|++||.+++
T Consensus 385 ds~~fi~~l~~ia~~g-fiy~~i~------------------------l~~~g~~~~~iiirsLDliTi~VPPALPAalt 439 (1140)
T KOG0208|consen 385 DSFKFILFLVIIALIG-FIYTAIV------------------------LNLLGVPLKTIIIRSLDLITIVVPPALPAALT 439 (1140)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhHh------------------------HHHcCCCHHHHhhhhhcEEEEecCCCchhhhh
Confidence 222222222222211 1111100 00022266788999999999999999999999
Q ss_pred HHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccC-CCc-------c--------h
Q 043360 485 VSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVN-NDV-------A--------S 548 (1108)
Q Consensus 485 i~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~-~~~-------~--------~ 548 (1108)
+...++.+|+ .|+|+.|-+++.+...|+++++|||||||||++.+.+..+..-...-. ... . .
T Consensus 440 vG~~~a~~RL-kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 518 (1140)
T KOG0208|consen 440 VGIIYAQSRL-KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSL 518 (1140)
T ss_pred HHHHHHHHHH-HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccc
Confidence 9999999999 999999999999999999999999999999999999999987432211 000 0 0
Q ss_pred hhhHHHHHHHHHHhc-cccc---ccccCCChhHHHHHHHHHHcCCC--------------------h-----hhh----c
Q 043360 549 EINQAVLQALERGIG-ASVL---VPEISLWPTTDWLVSWAKSRSLN--------------------V-----EFV----D 595 (1108)
Q Consensus 549 ~~~~~~~~~l~~~~~-~~~~---~~~~~g~p~e~ALl~~a~~~g~~--------------------~-----~~~----~ 595 (1108)
+.+......+..+++ ||.. .....|||.|.-+.+...+.-.+ + +.- .
T Consensus 519 ~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~ 598 (1140)
T KOG0208|consen 519 RSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGE 598 (1140)
T ss_pred cccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCC
Confidence 000001123333444 7754 67788999999888865522100 0 000 1
Q ss_pred ccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCC
Q 043360 596 QNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGL 675 (1108)
Q Consensus 596 ~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~Gl 675 (1108)
+.+.+++.+||+|..+|||||++.++.++ +++|+|||||.|.+.|++ +..+.++++.++.|+.+|+
T Consensus 599 ~~~si~k~feF~S~LrRMSVIv~~~~e~~---~~~ftKGaPE~I~~ic~p-----------~tvP~dy~evl~~Yt~~Gf 664 (1140)
T KOG0208|consen 599 GEISIVKQFEFSSALRRMSVIVSTGGEDK---MMVFTKGAPESIAEICKP-----------ETVPADYQEVLKEYTHQGF 664 (1140)
T ss_pred cceEEEEecccchhhheEEEEEecCCCCc---eEeeccCCHHHHHHhcCc-----------ccCCccHHHHHHHHHhCCe
Confidence 15789999999999999999999876665 999999999999999987 3557889999999999999
Q ss_pred eEEEEEEecCc----------chhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCC
Q 043360 676 RPIAFACGQTE----------VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGN 741 (1108)
Q Consensus 676 R~L~~A~k~l~----------~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI 741 (1108)
|+||+|+|.++ .++..|+||+|+|++.| |++++++|++|++|+|+++|+||||..||..+||+||+
T Consensus 665 RVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgm 744 (1140)
T KOG0208|consen 665 RVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGM 744 (1140)
T ss_pred EEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccc
Confidence 99999999997 57889999999999999 99999999999999999999999999999999999999
Q ss_pred CCCC-----------------------------------------------------CCccccchhhhhhcC---HHHHH
Q 043360 742 FRPE-----------------------------------------------------SNDIALEGEQFRELN---STERM 765 (1108)
Q Consensus 742 ~~~~-----------------------------------------------------~~~~vi~G~~l~~l~---~~~~~ 765 (1108)
+.+. +..++++|+.|+-+. .+.+.
T Consensus 745 i~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~ 824 (1140)
T KOG0208|consen 745 IEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVP 824 (1140)
T ss_pred cCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHH
Confidence 9760 123677888877654 56788
Q ss_pred HHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHH
Q 043360 766 AKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLP 843 (1108)
Q Consensus 766 ~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~ 843 (1108)
+++.+..|||||+|.||.++|+.+|+.|+.|+|+|| |+|||.|||+|||||+++. .| |.-||.+.-. +++++.+
T Consensus 825 ~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGD-GANDCgALKaAdvGISLSe--aE-ASvAApFTSk~~~I~cVp~ 900 (1140)
T KOG0208|consen 825 KILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGD-GANDCGALKAADVGISLSE--AE-ASVAAPFTSKTPSISCVPD 900 (1140)
T ss_pred HHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCC-CcchhhhhhhcccCcchhh--hh-HhhcCccccCCCchhhHhH
Confidence 889999999999999999999999999999999999 9999999999999999873 33 4467888887 9999999
Q ss_pred HHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCC
Q 043360 844 ILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRT 923 (1108)
Q Consensus 844 li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~ 923 (1108)
+|++||+.+..-...++|...|.++..+..+ .+++....+++.|.++++++..++.+++|+..+|..++-..||..
T Consensus 901 vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~-- 976 (1140)
T KOG0208|consen 901 VIREGRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPT-- 976 (1140)
T ss_pred HHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCc--
Confidence 9999999999999999999887765443222 234557889999999999999999999999999988887777654
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCCC--------CccccchhhhHHHHHHHHHHHhhhhhcccccccc
Q 043360 924 KSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQ--VIPGM--------NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLP 993 (1108)
Q Consensus 924 ~~lis~~~~~~i~~~~~~~~~v~~~~~~~~~--~~~~~--------~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~ 993 (1108)
.+++++.+...++|.++..++.++.++.+. .|+.. ......|.+|..-.|..+++.+.... ..++.+
T Consensus 977 -~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S~--g~pfr~ 1053 (1140)
T KOG0208|consen 977 -NLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLSK--GSPFRR 1053 (1140)
T ss_pred -cccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeecc--CCcccC
Confidence 789999999999988888888877776543 22221 13445678888888888888766543 344555
Q ss_pred cccchhHHHHHHHHHHHHHHHHHH-----HhHhhhccccCCh-hHHHHHHHHHHHHHHHHHHH
Q 043360 994 VVLKKFNVLMVFLIVIAAQVLVVE-----FATSLAGYQRLNG-MQWGICFILAVLPWGIHRAV 1050 (1108)
Q Consensus 994 ~~~~n~~~~~~i~~~~~~~~~~v~-----~~~~~f~~~~l~~-~~wl~~i~~~~~~l~~~~i~ 1050 (1108)
.+|+|+.|...+.......+.++. .....++.++.+- .+-++++++.+..+...++.
T Consensus 1054 pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~~~~fii~~~~~~~~~~~~~~ 1116 (1140)
T KOG0208|consen 1054 PLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPTTFDRFIILLVVISYFALNYIQ 1116 (1140)
T ss_pred chhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCcchhHHHHHHHHHHHHHHHHhh
Confidence 889999887766544443333221 1224567777665 33344444444444433333
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-89 Score=774.70 Aligned_cols=763 Identities=16% Similarity=0.200 Sum_probs=598.1
Q ss_pred CCCCCCCC---chHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHH
Q 043360 226 NTIKPNHA---REFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLE 302 (1108)
Q Consensus 226 N~~~~~~~---~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~ 302 (1108)
|.+...+. .-+...+++||+.+.|++|++.+..++++.+....... |+ .+..+++++..+.+++.|+++.+..+
T Consensus 82 n~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~t-y~--~pl~fvl~itl~keavdd~~r~~rd~ 158 (1051)
T KOG0210|consen 82 NEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLST-YW--GPLGFVLTITLIKEAVDDLKRRRRDR 158 (1051)
T ss_pred chhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhh-hh--HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 55544433 34567889999999999999999999988764332221 21 22333444455678999999888887
Q ss_pred HHHHHhhcCcEEEE-EECCEEEEEEccccccCcEEEEcCCCccCcceEEEecCc----eeeeec-ccCCCCC--------
Q 043360 303 KKQWEEKNKLEVKV-VRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDG----LMLDDV-LNSEIDP-------- 368 (1108)
Q Consensus 303 ~l~~~~~~~~~v~V-iRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~----l~VdeS-LTGES~p-------- 368 (1108)
.++ ++..++ -|||...+ ++++|+|||+|.++.+++||||.++|.+++ |+|.+. ||||++.
T Consensus 159 ~~N-----se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~ 232 (1051)
T KOG0210|consen 159 ELN-----SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPR 232 (1051)
T ss_pred hhh-----hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccchh
Confidence 776 444444 47776655 999999999999999999999999998663 899999 9999998
Q ss_pred ------------------------------------------CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH-
Q 043360 369 ------------------------------------------DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN- 405 (1108)
Q Consensus 369 ------------------------------------------~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~- 405 (1108)
..+|.|+++|.|.+|.+.|+|+|||.+|+...+....
T Consensus 233 tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRsvMNts~pr 312 (1051)
T KOG0210|consen 233 TQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRSVMNTSRPR 312 (1051)
T ss_pred hccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHHHhccCCcc
Confidence 2358999999999999999999999999865543332
Q ss_pred ------------HHHH-HHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHH
Q 043360 406 ------------LSLA-VTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVA 472 (1108)
Q Consensus 406 ------------~~~~-~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv 472 (1108)
+.-+ ++.+..+..+..+..+.. ..|...+++++.++.
T Consensus 313 ~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~------------------------------~~wyi~~~RfllLFS 362 (1051)
T KOG0210|consen 313 SKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG------------------------------SDWYIYIIRFLLLFS 362 (1051)
T ss_pred cccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC------------------------------CchHHHHHHHHHHHh
Confidence 1111 111111222222222211 155678889999999
Q ss_pred HHhcCchhHHHHHHHHHHHhhhhhcc----ccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCc--
Q 043360 473 IAVQHGMPFVITVSLFFWNDKLLINH----HAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDV-- 546 (1108)
Q Consensus 473 ~~vP~~Lpl~vti~l~~~~~~m~~~~----~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-- 546 (1108)
..+|.+|-.-+.++...-...+ .++ |.+||+...-|+||++.++.+|||||||+|+|.+++++.+.-.|..+.
T Consensus 363 ~IIPISLRvnlDmaK~~ys~~i-~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~ 441 (1051)
T KOG0210|consen 363 SIIPISLRVNLDMAKIVYSWQI-EHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMD 441 (1051)
T ss_pred hhceeEEEEehhHHHhhHhhhc-ccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHH
Confidence 9999888888888777777777 665 567999999999999999999999999999999999999865554321
Q ss_pred ------------------------chhhhHHHHHHHHHHhccccc---------ccccCCChhHHHHHHHHHHcCCChh-
Q 043360 547 ------------------------ASEINQAVLQALERGIGASVL---------VPEISLWPTTDWLVSWAKSRSLNVE- 592 (1108)
Q Consensus 547 ------------------------~~~~~~~~~~~l~~~~~~~~~---------~~~~~g~p~e~ALl~~a~~~g~~~~- 592 (1108)
..+.+..+.++.....+||.+ ..+++.+|+|.||++|.+..|...-
T Consensus 442 eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~ 521 (1051)
T KOG0210|consen 442 EVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAK 521 (1051)
T ss_pred HHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEee
Confidence 122334455555444447765 2468999999999999998887543
Q ss_pred ------------hhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhH
Q 043360 593 ------------FVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEK 660 (1108)
Q Consensus 593 ------------~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~ 660 (1108)
+...+|+++++|||+|+.|||++||+++..++ +..|.|||+.+|-..... .
T Consensus 522 Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~e---vtfylKGAD~VMs~iVq~--------------N 584 (1051)
T KOG0210|consen 522 RDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEE---VTFYLKGADVVMSGIVQY--------------N 584 (1051)
T ss_pred cccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCce---EEEEEecchHHHhccccc--------------c
Confidence 22347999999999999999999999986665 999999999988665432 3
Q ss_pred HHHHHHHHHHHhCCCeEEEEEEecCc----------------------------chhhhccCceeeEEEec----ccchH
Q 043360 661 RRFQKLIKDMEDSGLRPIAFACGQTE----------------------------VSEIKENGLHLLALAGL----REEIK 708 (1108)
Q Consensus 661 ~~~~~~i~~~a~~GlR~L~~A~k~l~----------------------------~~~~~E~~l~llG~i~i----r~~v~ 708 (1108)
+++++....||.+|+|||++|.|.++ ....+|+||.++|++|+ |++|+
T Consensus 585 dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk 664 (1051)
T KOG0210|consen 585 DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVK 664 (1051)
T ss_pred hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhH
Confidence 67888899999999999999999996 12357999999999999 99999
Q ss_pred HHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC--------------------------CCCccccchhhhhhc---
Q 043360 709 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRP--------------------------ESNDIALEGEQFREL--- 759 (1108)
Q Consensus 709 ~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~--------------------------~~~~~vi~G~~l~~l--- 759 (1108)
.+++.||+|||||||+|||+.+||+.||+..++... .+..++|+|+.++-.
T Consensus 665 ~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~y 744 (1051)
T KOG0210|consen 665 PTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKY 744 (1051)
T ss_pred hHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHH
Confidence 999999999999999999999999999999999875 245789999988753
Q ss_pred CHHHHHHHhcccc--eecccCHhhHHHHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCccEe-cCCCccHHHHhccchhh
Q 043360 760 NSTERMAKLDSMT--LMGSCLADDKLLLVQSVKEK-GHVVAFFGGSSTRDTPALKEADVGIT-EENKCTEMARECSDIVI 835 (1108)
Q Consensus 760 ~~~~~~~~~~~~~--V~ar~sP~~K~~iV~~lq~~-g~~Va~iGD~G~ND~~aLk~AdVGIa-mg~~gte~ak~aADivl 835 (1108)
.++|+.++..++. |+|||+|+||+++++.+|++ |..|+++|| |.||++|+++||+||+ .|++|.+ |.-|||+.+
T Consensus 745 ye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGD-GGNDVsMIq~A~~GiGI~gkEGkQ-ASLAADfSI 822 (1051)
T KOG0210|consen 745 YEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGD-GGNDVSMIQAADVGIGIVGKEGKQ-ASLAADFSI 822 (1051)
T ss_pred HHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcC-CCccchheeecccceeeecccccc-cchhccccH
Confidence 4678888876665 99999999999999999988 999999999 9999999999999996 4545554 458999999
Q ss_pred cccccHHHH-HHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHH---HHHHHHHHhHHHHHhhhcccC-
Q 043360 836 SAVGSLLPI-LKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQ---LIWVYSIMYMLGGLIMRMEFK- 910 (1108)
Q Consensus 836 ~~f~~I~~l-i~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~q---ll~~nli~~~l~~l~la~e~~- 910 (1108)
.+|+.+.++ +.|||+.|+|..+.-+|.+...++...++.++.....+.|..-.| |.-+..+++.+|.+.+..+..
T Consensus 823 tqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv 902 (1051)
T KOG0210|consen 823 TQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDV 902 (1051)
T ss_pred HHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccc
Confidence 999999999 678999999999999999999999888898888777666665544 667788999999999988665
Q ss_pred CCCCCcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccchhhhHHHHHHHHHHH-hhhhh
Q 043360 911 DQEPVTNPPA----RRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQ-FDAMR 985 (1108)
Q Consensus 911 ~~~l~~~~P~----~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~T~~F~~~v~~q~~~~-~~~r~ 985 (1108)
++++....|. -.++..++.+.|..|+..++||..++.+..+.. +..+.....++.|+++++..+... +..+
T Consensus 903 ~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l---~~~ef~~ivaisFtaLi~tELiMVaLtv~- 978 (1051)
T KOG0210|consen 903 SESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLL---FDTEFIHIVAISFTALILTELIMVALTVR- 978 (1051)
T ss_pred cHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHH---hhhhheEeeeeeeHHHHHHHHHHHhhhhh-
Confidence 5555555565 256678899999999999999998877754322 222344456888988888887653 3333
Q ss_pred cccccccccccchhHHHHHHHHHHHHHHHHHHHhHhhhccccC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 043360 986 LLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRL-NGMQWGICFILAVLPWGIHRAVNFIADSFLDRS 1061 (1108)
Q Consensus 986 ~~~~~~f~~~~~n~~~~~~i~~~~~~~~~~v~~~~~~f~~~~l-~~~~wl~~i~~~~~~l~~~~i~k~~~~~~~~~~ 1061 (1108)
.|+|+.+++-+++++++++.+.++.++|....+ ++.+.+-..++.++++++.++.|.+.|++-+..
T Consensus 979 ----------tw~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpS 1045 (1051)
T KOG0210|consen 979 ----------TWHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPS 1045 (1051)
T ss_pred ----------hhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 367888888889999998888888888876554 444445556677788888999999988775543
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-85 Score=791.07 Aligned_cols=522 Identities=18% Similarity=0.265 Sum_probs=425.1
Q ss_pred HHhhhhHHHHHHHHHHHhhccccccC--CCCC-CcchhHHHHHHHHHHhchhhHH----HHHHHHHHHHHHHHhhcCc-E
Q 043360 242 KASNNFNILLLLVAAALSFVTGTIEQ--GPKD-GWHDGAAILIAVFVLLTFPAVT----NFRRARKLEKKQWEEKNKL-E 313 (1108)
Q Consensus 242 ~~~~~~~~i~lli~ails~~~~~~~~--~~~~-~~~~~~~il~~vl~v~~v~~~~----~~~~~~~~~~l~~~~~~~~-~ 313 (1108)
.++++|+.++++++++++++++.... +... .+++++.|++.++++.+++.+. +++.+++.++|. +..+. +
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~--~~~~~~~ 105 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALR--QTQTEMK 105 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCcce
Confidence 36789999999999999998886432 1111 1356777877777777777666 677777788887 45443 6
Q ss_pred EE-EEECCEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCC---CeeeecceEeeceE
Q 043360 314 VK-VVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRN---PFLFSGSKVMEGHG 385 (1108)
Q Consensus 314 v~-ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~---~~l~~Gt~v~~G~~ 385 (1108)
++ |.|||++++|++++|+|||+|.|++||+|||||++++|+. .|||| |||||.| +.+ +.+|+||.+.+|++
T Consensus 106 a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~ 184 (673)
T PRK14010 106 ARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWL 184 (673)
T ss_pred EEEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceE
Confidence 75 7899999999999999999999999999999999999987 99999 9999999 444 66999999999999
Q ss_pred EEEEEEeccccHHHHHHHHH-----------HHHH----HHHHHHHHHHHHHH-HhccCCCCCCCccccccccccchhhh
Q 043360 386 TMLLISVGGNIASGQVLRSN-----------LSLA----VTVLIALVALIRLL-WRKHSGDDHELPELKGNVSVGTVMKI 449 (1108)
Q Consensus 386 ~~~Vv~tG~~T~~g~i~~~~-----------~~~~----~~~l~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~ 449 (1108)
+++|+++|.+|.+||+.+.+ .... ...+++++.++.++ +..+
T Consensus 185 ~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~~~~~~~~~~~~---------------------- 242 (673)
T PRK14010 185 EVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVVILTMYPLAKF---------------------- 242 (673)
T ss_pred EEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh----------------------
Confidence 99999999999999999888 1111 11111111111111 1000
Q ss_pred hhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccc
Q 043360 450 FERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNR 529 (1108)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~ 529 (1108)
..+...+...+++++++|||+|+..+++.++.+++|| +|+|+++|+++++|+||++|+||+|||||||+|+
T Consensus 243 --------~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~-ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn 313 (673)
T PRK14010 243 --------LNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRV-TQFNILAKSGRSVETCGDVNVLILDKTGTITYGN 313 (673)
T ss_pred --------ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH-hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCC
Confidence 0233456777888889999999999999999999999 9999999999999999999999999999999988
Q ss_pred eEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCC
Q 043360 530 VDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSN 609 (1108)
Q Consensus 530 m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~ 609 (1108)
+.+.++...+. . ...+++..+..|+ ..+.||+++|+++++++.+++.... ..+..||+++
T Consensus 314 ~~~~~~~~~~~-~----------~~~~ll~~a~~~~----~~s~~P~~~AIv~~a~~~~~~~~~~-----~~~~~pF~~~ 373 (673)
T PRK14010 314 RMADAFIPVKS-S----------SFERLVKAAYESS----IADDTPEGRSIVKLAYKQHIDLPQE-----VGEYIPFTAE 373 (673)
T ss_pred eEEEEEEeCCC-c----------cHHHHHHHHHHhc----CCCCChHHHHHHHHHHHcCCCchhh-----hcceeccccc
Confidence 77777653211 0 1112333333343 2357999999999999877653221 1235799999
Q ss_pred CCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchh
Q 043360 610 NKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSE 689 (1108)
Q Consensus 610 rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~ 689 (1108)
+|+|++.++ ++ .+.|||++.++++|+. +|... ..++.+..++++++|+|+++++.
T Consensus 374 ~k~~gv~~~---g~------~i~kGa~~~il~~~~~----~g~~~-----~~~~~~~~~~~a~~G~~~l~v~~------- 428 (673)
T PRK14010 374 TRMSGVKFT---TR------EVYKGAPNSMVKRVKE----AGGHI-----PVDLDALVKGVSKKGGTPLVVLE------- 428 (673)
T ss_pred cceeEEEEC---CE------EEEECCHHHHHHHhhh----cCCCC-----chHHHHHHHHHHhCCCeEEEEEE-------
Confidence 999999752 32 3459999999999985 22211 22356677889999999999875
Q ss_pred hhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHH
Q 043360 690 IKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERM 765 (1108)
Q Consensus 690 ~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~ 765 (1108)
|++++|++++ |||++++|++||++||+++|+||||+.||.+||+++||.+
T Consensus 429 ----~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------------- 482 (673)
T PRK14010 429 ----DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------------- 482 (673)
T ss_pred ----CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------------
Confidence 6799999999 9999999999999999999999999999999999999975
Q ss_pred HHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHH
Q 043360 766 AKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLP 843 (1108)
Q Consensus 766 ~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~ 843 (1108)
++||++||||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+||++||+|++ ||+.|++
T Consensus 483 -------v~A~~~PedK~~iV~~lQ~~G~~VaMtGD-GvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~ 553 (673)
T PRK14010 483 -------FVAECKPEDKINVIREEQAKGHIVAMTGD-GTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLME 553 (673)
T ss_pred -------EEcCCCHHHHHHHHHHHHhCCCEEEEECC-ChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHH
Confidence 99999999999999999999999999999 999999999999999999 899999999999999 9999999
Q ss_pred HHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHH
Q 043360 844 ILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTT 877 (1108)
Q Consensus 844 li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~ 877 (1108)
++++||++|.|+++++.|.+..|+..++..+...
T Consensus 554 av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~ 587 (673)
T PRK14010 554 VVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAM 587 (673)
T ss_pred HHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHH
Confidence 9999999999999999999999997766555443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-83 Score=778.73 Aligned_cols=525 Identities=17% Similarity=0.231 Sum_probs=426.9
Q ss_pred HHhhhhHHHHHHHHHHHhhccccccC------CCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcC-cEE
Q 043360 242 KASNNFNILLLLVAAALSFVTGTIEQ------GPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNK-LEV 314 (1108)
Q Consensus 242 ~~~~~~~~i~lli~ails~~~~~~~~------~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~-~~v 314 (1108)
.||++|+.+++++++++++++++.+. ....+|..++.+++.+++..+++++++++.++++++|+ +..+ .++
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~--~l~~~~~a 106 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLR--GAKKDTFA 106 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCCCeE
Confidence 48899999999999999999886432 11134555566666666677788899999999999998 5444 579
Q ss_pred EEEECCE-EEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCC---CeeeecceEeeceEE
Q 043360 315 KVVRSGR-EQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRN---PFLFSGSKVMEGHGT 386 (1108)
Q Consensus 315 ~ViRdG~-~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~---~~l~~Gt~v~~G~~~ 386 (1108)
+|+|||+ +++|++++|++||+|.|++||+|||||++++|.. .|||| |||||.| +.+ +.+|+||.+.+|.++
T Consensus 107 ~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~ 185 (679)
T PRK01122 107 RKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIV 185 (679)
T ss_pred EEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEE
Confidence 9999988 8999999999999999999999999999999975 99999 9999999 333 339999999999999
Q ss_pred EEEEEeccccHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhh
Q 043360 387 MLLISVGGNIASGQVLRSN----------------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIF 450 (1108)
Q Consensus 387 ~~Vv~tG~~T~~g~i~~~~----------------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 450 (1108)
++|+++|.+|.+|++.+.+ +...+.++.+++....+.+..+.
T Consensus 186 i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~---------------------- 243 (679)
T PRK01122 186 IRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYS---------------------- 243 (679)
T ss_pred EEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHh----------------------
Confidence 9999999999999999877 11111111111111111111110
Q ss_pred hhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccce
Q 043360 451 ERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRV 530 (1108)
Q Consensus 451 ~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m 530 (1108)
... ..+..++++++++|||+|+.++++....++.|| +++|+++|+++++|+||++|+||+|||||||+|+|
T Consensus 244 ------g~~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~-ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~ 314 (679)
T PRK01122 244 ------GGA--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRV-LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNR 314 (679)
T ss_pred ------Cch--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHH-hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcE
Confidence 001 257788999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred EEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHH-cCCChhhhcccceeeeeecCCCC
Q 043360 531 DVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKS-RSLNVEFVDQNLSVLEHRKLSSN 609 (1108)
Q Consensus 531 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~-~g~~~~~~~~~~~il~~~~F~s~ 609 (1108)
++++++..+. .+ ++ +++..+.+|+ ....||..+||++++++ .+.+. .+..++..+.+||++.
T Consensus 315 ~v~~~~~~~~-~~--------~~--~ll~~a~~~s----~~s~hP~~~AIv~~a~~~~~~~~--~~~~~~~~~~~pF~s~ 377 (679)
T PRK01122 315 QASEFLPVPG-VT--------EE--ELADAAQLSS----LADETPEGRSIVVLAKQRFNLRE--RDLQSLHATFVPFSAQ 377 (679)
T ss_pred EEEEEEeCCC-CC--------HH--HHHHHHHHhc----CCCCCchHHHHHHHHHhhcCCCc--hhhccccceeEeecCc
Confidence 9999875332 11 11 2233232233 33568999999999986 34432 1223567788999999
Q ss_pred CCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchh
Q 043360 610 NKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSE 689 (1108)
Q Consensus 610 rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~ 689 (1108)
+|+|++.+ ++ +.|+|||+|.+++.|.. +|. +.++++++.+++++++|+|++++|+
T Consensus 378 ~~~~gv~~---~g------~~~~kGa~e~il~~~~~----~g~-----~~~~~~~~~~~~~a~~G~~~l~va~------- 432 (679)
T PRK01122 378 TRMSGVDL---DG------REIRKGAVDAIRRYVES----NGG-----HFPAELDAAVDEVARKGGTPLVVAE------- 432 (679)
T ss_pred CceEEEEE---CC------EEEEECCHHHHHHHHHh----cCC-----cChHHHHHHHHHHHhCCCcEEEEEE-------
Confidence 99998864 23 26799999999999964 222 1235677888999999999999997
Q ss_pred hhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHH
Q 043360 690 IKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERM 765 (1108)
Q Consensus 690 ~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~ 765 (1108)
|++++|++++ |||++++|++||++||+++|+||||+.||.+||+++||.+
T Consensus 433 ----~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~---------------------- 486 (679)
T PRK01122 433 ----DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------------- 486 (679)
T ss_pred ----CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----------------------
Confidence 5699999999 9999999999999999999999999999999999999975
Q ss_pred HHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHH
Q 043360 766 AKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLP 843 (1108)
Q Consensus 766 ~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~ 843 (1108)
++||++||||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+||++||++++ ||+.|++
T Consensus 487 -------v~A~~~PedK~~iV~~lQ~~G~~VaMtGD-GvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~ 557 (679)
T PRK01122 487 -------FLAEATPEDKLALIRQEQAEGRLVAMTGD-GTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIE 557 (679)
T ss_pred -------EEccCCHHHHHHHHHHHHHcCCeEEEECC-CcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHH
Confidence 89999999999999999999999999999 999999999999999999 899999999999999 9999999
Q ss_pred HHHhhhhhhhhhhhhhhhHhhcchh----hHHHHHHHHH
Q 043360 844 ILKLGRCAYCNIQKFTKLQLTGCAS----GLLITLVTTL 878 (1108)
Q Consensus 844 li~~GR~~~~~i~k~i~~~l~~ni~----~i~~~~~~~~ 878 (1108)
++++||+..-.--..-.|++. |-+ +++++++...
T Consensus 558 av~~GR~~~~tr~~~~~f~~~-n~~~~~~~i~p~~~~~~ 595 (679)
T PRK01122 558 VVEIGKQLLMTRGALTTFSIA-NDVAKYFAIIPAMFAAT 595 (679)
T ss_pred HHHHHHHHHhhhHhhhhhhHH-HHHHHHHHHHHHHHHhh
Confidence 999999999777777778766 544 4444444443
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-85 Score=741.01 Aligned_cols=680 Identities=20% Similarity=0.240 Sum_probs=540.3
Q ss_pred HhhCCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCC
Q 043360 194 KEIGGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPK 270 (1108)
Q Consensus 194 ~~~gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~ 270 (1108)
-.-+.++++.+.|+...+ ||+++|+++|++. |++.+++...+ ..|+--+.+|..+.+-.+|++...+.- ..+.+
T Consensus 18 l~~~p~eeVfeeL~~t~~-GLt~~E~~eRlk~fG~NkleEkken~~-lKFl~Fm~~PlswVMEaAAimA~~Lan-g~~~~ 94 (942)
T KOG0205|consen 18 LEAIPIEEVFEELLCTRE-GLTSDEVEERLKIFGPNKLEEKKESKF-LKFLGFMWNPLSWVMEAAAIMAIGLAN-GGGRP 94 (942)
T ss_pred cccCchhhhHHHHhcCCC-CCchHHHHHHHHhhCchhhhhhhhhHH-HHHHHHHhchHHHHHHHHHHHHHHHhc-CCCCC
Confidence 356788999888887644 9999999999999 99998876554 556778889999999999998776542 34556
Q ss_pred CCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEE
Q 043360 271 DGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLV 350 (1108)
Q Consensus 271 ~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgil 350 (1108)
++|.|...|+..++++..++++++++......+|. .....+.+|+|||+|.++++.+||||||+.++.||+||||++|
T Consensus 95 ~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~--a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRL 172 (942)
T KOG0205|consen 95 PDWQDFVGICCLLLINSTISFIEENNAGNAAAALM--AGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARL 172 (942)
T ss_pred cchhhhhhhheeeeecceeeeeeccccchHHHHHH--hccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccce
Confidence 68999999999999999999999999999999998 6667799999999999999999999999999999999999999
Q ss_pred EecCceeeeec-ccCCCCC---CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH---------------HHHHHH
Q 043360 351 VNSDGLMLDDV-LNSEIDP---DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN---------------LSLAVT 411 (1108)
Q Consensus 351 l~g~~l~VdeS-LTGES~p---~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~---------------~~~~~~ 411 (1108)
++++-|.||+| |||||.| ++++.+|+||+|++|++.++|++||.+|..|+-+.++ ++.++.
T Consensus 173 l~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci 252 (942)
T KOG0205|consen 173 LEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGIGNFCI 252 (942)
T ss_pred ecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhhhhHHH
Confidence 99999999999 9999999 8899999999999999999999999999999999888 555555
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHH
Q 043360 412 VLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIA-VQHGMPFVITVSLFFW 490 (1108)
Q Consensus 412 ~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~-vP~~Lpl~vti~l~~~ 490 (1108)
+.+.+.+++-+....+. ...........+.++++. +|.|+|..++++++.+
T Consensus 253 ~si~~g~lie~~vmy~~----------------------------q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiG 304 (942)
T KOG0205|consen 253 CSIALGMLIEITVMYPI----------------------------QHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 304 (942)
T ss_pred HHHHHHHHHHHHhhhhh----------------------------hhhhhhhhhhheheeeecccccccceeeeehhhHH
Confidence 55444444443332210 001223334444455554 9999999999999999
Q ss_pred HhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEE--E--EECCcccCCCcchhhhHHHHHHHHHHhcccc
Q 043360 491 NDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSK--F--CIGEKDVNNDVASEINQAVLQALERGIGASV 566 (1108)
Q Consensus 491 ~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~--~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 566 (1108)
..++ +++++++++++|+|+|+.+|++|+|||||||.|+++|.+ + +..+- + ++ +++..++.++
T Consensus 305 s~rL-aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv--~--------~D--~~~L~A~rAs- 370 (942)
T KOG0205|consen 305 SHRL-SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGV--D--------KD--DVLLTAARAS- 370 (942)
T ss_pred HHHH-HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCC--C--------hH--HHHHHHHHHh-
Confidence 9999 999999999999999999999999999999999999998 3 33331 1 11 2333333333
Q ss_pred cccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccc
Q 043360 567 LVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYY 646 (1108)
Q Consensus 567 ~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~ 646 (1108)
.....|.+|.|++...++ +.+.+..|+.++.+|||+..||.+..+.+++|+ .+..+|||||.|++.|+..
T Consensus 371 --r~en~DAID~A~v~~L~d----PKeara~ikevhF~PFnPV~Krta~ty~d~dG~----~~r~sKGAPeqil~l~~~~ 440 (942)
T KOG0205|consen 371 --RKENQDAIDAAIVGMLAD----PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGN----WHRVSKGAPEQILKLCNED 440 (942)
T ss_pred --hhcChhhHHHHHHHhhcC----HHHHhhCceEEeeccCCccccceEEEEECCCCC----EEEecCCChHHHHHHhhcc
Confidence 244778999999998764 466788999999999999999999999999998 7889999999999999853
Q ss_pred cccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcc--hhhhccCceeeEEEec----ccchHHHHHHHHHcCCE
Q 043360 647 YDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEV--SEIKENGLHLLALAGL----REEIKSTVEALRNAGVR 720 (1108)
Q Consensus 647 ~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~--~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~ 720 (1108)
.+.++++.+.+++||++|+|.|++|++..+. .+.....+.++|+.-+ |++..++|+.....|+.
T Consensus 441 ----------~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~ 510 (942)
T KOG0205|consen 441 ----------HDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVN 510 (942)
T ss_pred ----------CcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccce
Confidence 3567889999999999999999999998762 3345567899999998 99999999999999999
Q ss_pred EEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhh-hhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEE
Q 043360 721 IILVSEDELLAVTEVACELGNFRPESNDIALEGEQF-RELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFF 799 (1108)
Q Consensus 721 v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l-~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~i 799 (1108)
|.|+|||....++..++++|+-.+-..+-.+-|..- +.+...+.++.+++.+-||.+.|+||+++|+.||++||.|+|+
T Consensus 511 VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmt 590 (942)
T KOG0205|consen 511 VKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMT 590 (942)
T ss_pred eeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceeccc
Confidence 999999999999999999998764222222222221 2233345677778888899999999999999999999999999
Q ss_pred eCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHH
Q 043360 800 GGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTT 877 (1108)
Q Consensus 800 GD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~ 877 (1108)
|| |+||+||||+||+|||+. .++|+|+.+||||+. .++.|..++..+|.+|+|++.+..|.+...+-.+ +.|...
T Consensus 591 gd-gvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv-~gfml~ 667 (942)
T KOG0205|consen 591 GD-GVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV-FGFMLI 667 (942)
T ss_pred CC-Ccccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH-HHHHHH
Confidence 99 999999999999999998 899999999999999 9999999999999999999999999877665433 222222
Q ss_pred HhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 043360 878 LILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQF 951 (1108)
Q Consensus 878 ~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~ 951 (1108)
...+..-|++...+++-++-|. +.++.+.+... |....++.--+..|..-++.+.|++++...++|
T Consensus 668 alIw~~df~pfmvliiailnd~-t~mtis~d~v~-------psp~pdswkl~~ifatgvVlgtyma~~tvif~w 733 (942)
T KOG0205|consen 668 ALIWEFDFSPFMVLIIAILNDG-TIMTISKDRVK-------PSPTPDSWKLKEIFATGVVLGTYMAIMTVIFFW 733 (942)
T ss_pred HHHHHhcCCHHHHHHHHHhcCC-ceEEEEcccCC-------CCCCCcccchhhhheeeeEehhHHHHHHHHHhh
Confidence 2222334444444544444442 23333332221 222223333344555555666676665544443
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-80 Score=745.37 Aligned_cols=518 Identities=18% Similarity=0.255 Sum_probs=424.6
Q ss_pred HHhhhhHHHHHHHHHHHhhcccccc--CC---CCCCcchh---HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcE
Q 043360 242 KASNNFNILLLLVAAALSFVTGTIE--QG---PKDGWHDG---AAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLE 313 (1108)
Q Consensus 242 ~~~~~~~~i~lli~ails~~~~~~~--~~---~~~~~~~~---~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~ 313 (1108)
.||+||+.+++++++++++++++.+ .+ ...+|+++ +.+++.+++..+++++.+++.++++++|. +...+..
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~-~~~~~~~ 106 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLK-GTKKTTF 106 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCce
Confidence 4789999999999999999987642 11 22357874 44555667777889999999999999998 3333446
Q ss_pred EEEEE-CCEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCCC---eeeecceEeeceE
Q 043360 314 VKVVR-SGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRNP---FLFSGSKVMEGHG 385 (1108)
Q Consensus 314 v~ViR-dG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~~---~l~~Gt~v~~G~~ 385 (1108)
++|+| ||++++|++++|+|||+|.|++||+|||||++++|+. .|||| |||||.| +.++ .+|+||.+.+|.+
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88886 8999999999999999999999999999999999964 99999 9999999 3333 4999999999999
Q ss_pred EEEEEEeccccHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhh
Q 043360 386 TMLLISVGGNIASGQVLRSN----------------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKI 449 (1108)
Q Consensus 386 ~~~Vv~tG~~T~~g~i~~~~----------------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 449 (1108)
+++|+++|.+|.+|++.+.+ +..++.++.+++.+..+.+..+.
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~--------------------- 244 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYG--------------------- 244 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------
Confidence 99999999999999999887 11111111111111111111110
Q ss_pred hhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccc
Q 043360 450 FERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNR 529 (1108)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~ 529 (1108)
.....+...+++++++|||+|+...+.....++.|| +++|+++|+++++|+||++|+||||||||||+|+
T Consensus 245 ---------~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~-ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~ 314 (675)
T TIGR01497 245 ---------GNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV-LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGN 314 (675)
T ss_pred ---------ChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHH-HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCC
Confidence 111246677889999999988877777777899999 9999999999999999999999999999999999
Q ss_pred eEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCC
Q 043360 530 VDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSN 609 (1108)
Q Consensus 530 m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~ 609 (1108)
|++.+++..+.. + .++ ++..+.+|+ ....||.++|+++++++.|.+... ..++..+..||++.
T Consensus 315 ~~v~~~~~~~~~-~-------~~~---ll~~aa~~~----~~s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~pf~~~ 377 (675)
T TIGR01497 315 RLASEFIPAQGV-D-------EKT---LADAAQLAS----LADDTPEGKSIVILAKQLGIREDD--VQSLHATFVEFTAQ 377 (675)
T ss_pred eEEEEEEecCCC-c-------HHH---HHHHHHHhc----CCCCCcHHHHHHHHHHHcCCCccc--cccccceEEEEcCC
Confidence 999999853211 1 012 232222233 346899999999999987765432 22355678999999
Q ss_pred CCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchh
Q 043360 610 NKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSE 689 (1108)
Q Consensus 610 rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~ 689 (1108)
+|+|++.+. +| +.++|||+|.+++.|.. +|.. .++++++.+++++++|+|++++|+
T Consensus 378 ~~~sg~~~~--~g------~~~~kGa~e~i~~~~~~----~g~~-----~~~~~~~~~~~~a~~G~r~l~va~------- 433 (675)
T TIGR01497 378 TRMSGINLD--NG------RMIRKGAVDAIKRHVEA----NGGH-----IPTDLDQAVDQVARQGGTPLVVCE------- 433 (675)
T ss_pred CcEEEEEEe--CC------eEEEECCHHHHHHHHHh----cCCC-----CcHHHHHHHHHHHhCCCeEEEEEE-------
Confidence 888877543 33 36799999999998863 2221 234577888999999999999998
Q ss_pred hhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHH
Q 043360 690 IKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERM 765 (1108)
Q Consensus 690 ~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~ 765 (1108)
|.+++|++++ |||++++|++||++||+++|+||||..||.++|+++||.+
T Consensus 434 ----~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------------- 487 (675)
T TIGR01497 434 ----DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------------- 487 (675)
T ss_pred ----CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------------
Confidence 3599999999 9999999999999999999999999999999999999975
Q ss_pred HHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHH
Q 043360 766 AKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLP 843 (1108)
Q Consensus 766 ~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~ 843 (1108)
++||++|+||.++|+.+|++|+.|+|+|| |+||+|||++|||||||| +|+++|+++||++++ ||+.|++
T Consensus 488 -------v~a~~~PedK~~~v~~lq~~g~~VamvGD-G~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~ 558 (675)
T TIGR01497 488 -------FIAEATPEDKIALIRQEQAEGKLVAMTGD-GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIE 558 (675)
T ss_pred -------EEcCCCHHHHHHHHHHHHHcCCeEEEECC-CcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHH
Confidence 89999999999999999999999999999 999999999999999999 899999999999999 9999999
Q ss_pred HHHhhhhhhhhhhhhhhhHhhcchh
Q 043360 844 ILKLGRCAYCNIQKFTKLQLTGCAS 868 (1108)
Q Consensus 844 li~~GR~~~~~i~k~i~~~l~~ni~ 868 (1108)
++++||+++.+......|++..++.
T Consensus 559 av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 559 VVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHHHHHHHHHHHHHHheeeecccHH
Confidence 9999999999999999999987764
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-76 Score=676.73 Aligned_cols=770 Identities=16% Similarity=0.184 Sum_probs=576.5
Q ss_pred CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHH
Q 043360 226 NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQ 305 (1108)
Q Consensus 226 N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~ 305 (1108)
|+..-+. ++|.+++.|.-..|+..+..+|..+|+.-.+ ||..+..++++ +.+++-.-+++-+.+.++.
T Consensus 179 N~fdi~v-PtF~eLFkE~A~aPfFVFQVFcvgLWCLDey--------WYySlFtLfMl---i~fE~tlV~Qrm~~lse~R 246 (1160)
T KOG0209|consen 179 NKFDIVV-PTFSELFKEHAVAPFFVFQVFCVGLWCLDEY--------WYYSLFTLFML---IAFEATLVKQRMRTLSEFR 246 (1160)
T ss_pred CccccCC-ccHHHHHHHhccCceeeHhHHhHHHHHhHHH--------HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 8777664 5899999999999999999999999998774 88766554433 3455555566666666665
Q ss_pred HHhhcCcEEEEEECCEEEEEEccccccCcEEEEcC---CCccCcceEEEecCceeeeec-ccCCCCC-------------
Q 043360 306 WEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAK---GDRVPGDGLVVNSDGLMLDDV-LNSEIDP------------- 368 (1108)
Q Consensus 306 ~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~---Gd~IPaDgill~g~~l~VdeS-LTGES~p------------- 368 (1108)
.-...+..+.|+|+++|+.+..+||+|||+|.+.. ...||||.+|+.|++ .|||+ |||||.|
T Consensus 247 ~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLtGESvPl~KE~Ie~~~~d~ 325 (1160)
T KOG0209|consen 247 TMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLTGESVPLMKESIELRDSDD 325 (1160)
T ss_pred hcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhcCCCccccccccccCChhh
Confidence 11244678999999999999999999999999977 678999999999996 99999 9999999
Q ss_pred -------CCCCeeeecceEee-------------ceEEEEEEEeccccHHHHHHHHH--------------HHHHHHHHH
Q 043360 369 -------DRNPFLFSGSKVME-------------GHGTMLLISVGGNIASGQVLRSN--------------LSLAVTVLI 414 (1108)
Q Consensus 369 -------~~~~~l~~Gt~v~~-------------G~~~~~Vv~tG~~T~~g~i~~~~--------------~~~~~~~l~ 414 (1108)
++..++|.||++++ |-+.+.|++||.+|..|++.+.+ +.+++++++
T Consensus 326 ~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn~Etf~FILFLlV 405 (1160)
T KOG0209|consen 326 ILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTANNRETFIFILFLLV 405 (1160)
T ss_pred hcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeeeccHHHHHHHHHHHH
Confidence 36679999999984 45899999999999999998887 444555555
Q ss_pred HHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhh
Q 043360 415 ALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKL 494 (1108)
Q Consensus 415 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m 494 (1108)
|.+...+|.|... ..+. .++-...|+-++.|+...||.-||+-++++...+...+
T Consensus 406 FAiaAa~Yvwv~G--skd~-----------------------~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~AL 460 (1160)
T KOG0209|consen 406 FAIAAAGYVWVEG--SKDP-----------------------TRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIAL 460 (1160)
T ss_pred HHHHhhheEEEec--ccCc-----------------------chhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHH
Confidence 6655555555432 1111 01223456667778888899999999999999999999
Q ss_pred hhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCc-ccCCCcchhhhHHHHHHHHHHhccccc--cccc
Q 043360 495 LINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEK-DVNNDVASEINQAVLQALERGIGASVL--VPEI 571 (1108)
Q Consensus 495 ~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~ 571 (1108)
+|.++.|..+-.+.-.|++|+.|||||||||+..|.|.++--... .......++.+.+..+.+ +.|++.+ ....
T Consensus 461 -ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vl--AscHsLv~le~~l 537 (1160)
T KOG0209|consen 461 -AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVL--ASCHSLVLLEDKL 537 (1160)
T ss_pred -HHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHH--HHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999865222 111111222233333332 2232222 4568
Q ss_pred CCChhHHHHHHHHHHcCCChh------hhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhccc
Q 043360 572 SLWPTTDWLVSWAKSRSLNVE------FVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSY 645 (1108)
Q Consensus 572 ~g~p~e~ALl~~a~~~g~~~~------~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~ 645 (1108)
.|||.|+|.+++..+.--..+ +..+..++.+.+.|+|..|||||++....-+....+++.+|||||.|-++..
T Consensus 538 VGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~- 616 (1160)
T KOG0209|consen 538 VGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR- 616 (1160)
T ss_pred cCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH-
Confidence 999999999998753211111 1123478899999999999999998765321111388999999999988765
Q ss_pred ccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCc----------chhhhccCceeeEEEec----ccchHHHH
Q 043360 646 YYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE----------VSEIKENGLHLLALAGL----REEIKSTV 711 (1108)
Q Consensus 646 ~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~----------~~~~~E~~l~llG~i~i----r~~v~~aI 711 (1108)
+.+.++.+...+|+++|.|||+++||++. .++..|+||+|.|++.| |+|++++|
T Consensus 617 ------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I 684 (1160)
T KOG0209|consen 617 ------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTI 684 (1160)
T ss_pred ------------hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHH
Confidence 45788999999999999999999999997 57889999999999999 99999999
Q ss_pred HHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC---------------------------------------CCCccccc
Q 043360 712 EALRNAGVRIILVSEDELLAVTEVACELGNFRP---------------------------------------ESNDIALE 752 (1108)
Q Consensus 712 ~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~---------------------------------------~~~~~vi~ 752 (1108)
+.|++++.+|+|+||||+.||.++|+++||... +..+++++
T Consensus 685 ~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcit 764 (1160)
T KOG0209|consen 685 KELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCIT 764 (1160)
T ss_pred HHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcc
Confidence 999999999999999999999999999999865 12357888
Q ss_pred hhhhhhcCH-HHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHH-----
Q 043360 753 GEQFRELNS-TERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEM----- 826 (1108)
Q Consensus 753 G~~l~~l~~-~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~----- 826 (1108)
|+.++.+.. +.+.++++++.||||+.|.||..++..+++.|+.++|+|| |+||+.|||+||||||+=.+.-|.
T Consensus 765 G~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGD-GTNDVGALK~AhVGVALL~~~~e~~~~~~ 843 (1160)
T KOG0209|consen 765 GSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGD-GTNDVGALKQAHVGVALLNNPEESKKDKE 843 (1160)
T ss_pred hhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecC-CCcchhhhhhcccceehhcCChhhhhHHh
Confidence 999988764 5688999999999999999999999999999999999999 999999999999999953121110
Q ss_pred -----------------------------------------------------------------HHhccchhhc--ccc
Q 043360 827 -----------------------------------------------------------------ARECSDIVIS--AVG 839 (1108)
Q Consensus 827 -----------------------------------------------------------------ak~aADivl~--~f~ 839 (1108)
|.-||.+.-. +.+
T Consensus 844 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~ 923 (1160)
T KOG0209|consen 844 KRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVS 923 (1160)
T ss_pred hhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHH
Confidence 0112222222 777
Q ss_pred cHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCC
Q 043360 840 SLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPP 919 (1108)
Q Consensus 840 ~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P 919 (1108)
++.+.|+.||++..+.-+++... .-|.... ......++.-..-|++.|...-.+++. ..-+.+...+|-+.+.+++|
T Consensus 924 ~v~~IIrQGRctLVtTlQMfKIL-ALN~Lis-AYslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP 1000 (1160)
T KOG0209|consen 924 SVTHIIRQGRCTLVTTLQMFKIL-ALNCLIS-AYSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERP 1000 (1160)
T ss_pred HHHHHHHhcchhHHHHHHHHHHH-HHHHHHH-HHHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCC
Confidence 89999999999999887776653 3333211 122233445567788888887777654 34556666888888888888
Q ss_pred CCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----C------CCccccchhhhHHHHHHHHHH-Hhhhhhccc
Q 043360 920 ARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIP----G------MNRDIRKAMTFNSFTLCQVFN-QFDAMRLLK 988 (1108)
Q Consensus 920 ~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~~~~~~~----~------~~~~~~~T~~F~~~v~~q~~~-~~~~r~~~~ 988 (1108)
.. ++||.-.+..+++|-..|...++++.-.....- + +.+...+|.+|..-...|+.. .+|.+ .
T Consensus 1001 ~~---nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~---G 1074 (1160)
T KOG0209|consen 1001 LP---NIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQ---G 1074 (1160)
T ss_pred CC---CcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhhhcc---C
Confidence 76 789988888888888888777666543222111 1 124445666776666666654 34443 4
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHH----HHhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043360 989 KAVLPVVLKKFNVLMVFLIVIAAQVLVV----EFATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSFLD 1059 (1108)
Q Consensus 989 ~~~f~~~~~n~~~~~~i~~~~~~~~~~v----~~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~~~ 1059 (1108)
.++.+.+..|+.++.+++++..+.+.+. +=++..|...+++-.+-...++..++-++..+++..+.+.+|.
T Consensus 1075 ~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~ 1149 (1160)
T KOG0209|consen 1075 RPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFG 1149 (1160)
T ss_pred cchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 6677789999988888777666554443 2356778888888666665555555555555555555555554
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-73 Score=684.80 Aligned_cols=520 Identities=22% Similarity=0.273 Sum_probs=424.3
Q ss_pred CchHHHHHHHHhhhh---HHHHHHHHHHHhhccccccCCCCCCcchhHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHh
Q 043360 233 AREFFLFLLKASNNF---NILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAV-FVLLTFPAVTNFRRARKLEKKQWEE 308 (1108)
Q Consensus 233 ~~s~~~~l~~~~~~~---~~i~lli~ails~~~~~~~~~~~~~~~~~~~il~~v-l~v~~v~~~~~~~~~~~~~~l~~~~ 308 (1108)
+.+|++..|+.+++. +..+..++++..++++.+..-.. .|++..++++++ ++.-+++.+..-+..+..++|. .
T Consensus 131 g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~-~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~--~ 207 (713)
T COG2217 131 GWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFP-VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALL--D 207 (713)
T ss_pred hHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--c
Confidence 567888889999877 55555566666666664211111 345555544444 4444777777777788888888 7
Q ss_pred hcCcEEEEEE-CCEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCCCeeeecceEeec
Q 043360 309 KNKLEVKVVR-SGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRNPFLFSGSKVMEG 383 (1108)
Q Consensus 309 ~~~~~v~ViR-dG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~~~l~~Gt~v~~G 383 (1108)
..+..+++++ ||++++||.+||++||+|.|++||+||+||++++|++ .|||| |||||.| .+++.+++||.+.+|
T Consensus 208 l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G 286 (713)
T COG2217 208 LAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDEVFAGTVNLDG 286 (713)
T ss_pred cCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCEEeeeEEECCc
Confidence 8899997777 5669999999999999999999999999999999999 99999 9999999 889999999999999
Q ss_pred eEEEEEEEeccccHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccch
Q 043360 384 HGTMLLISVGGNIASGQVLRSN-----------------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTV 446 (1108)
Q Consensus 384 ~~~~~Vv~tG~~T~~g~i~~~~-----------------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 446 (1108)
..+..|+++|.+|.++++.+++ ..+++..+++++.+...+|....
T Consensus 287 ~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~------------------ 348 (713)
T COG2217 287 SLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFG------------------ 348 (713)
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc------------------
Confidence 9999999999999999999998 22233322222222211222110
Q ss_pred hhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCccc
Q 043360 447 MKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLV 526 (1108)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT 526 (1108)
..++...+..++++++++|||+|.+++|+++..++.+. +++|+++|+.+++|.++++|+|+||||||||
T Consensus 349 ----------~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a-A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT 417 (713)
T COG2217 349 ----------GGDWETALYRALAVLVIACPCALGLATPTAILVGIGRA-ARRGILIKGGEALERLAKVDTVVFDKTGTLT 417 (713)
T ss_pred ----------CCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH-HhCceEEeChHHHHhhccCCEEEEeCCCCCc
Confidence 01466789999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred ccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecC
Q 043360 527 CNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKL 606 (1108)
Q Consensus 527 ~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F 606 (1108)
+|+|+|.++...+. ++ ++++.+.... +..+.||..+|++++++..+... .+..+.+|
T Consensus 418 ~G~p~v~~v~~~~~--~e-------~~~L~laAal-------E~~S~HPiA~AIv~~a~~~~~~~------~~~~~~i~- 474 (713)
T COG2217 418 EGKPEVTDVVALDG--DE-------DELLALAAAL-------EQHSEHPLAKAIVKAAAERGLPD------VEDFEEIP- 474 (713)
T ss_pred CCceEEEEEecCCC--CH-------HHHHHHHHHH-------HhcCCChHHHHHHHHHHhcCCCC------ccceeeec-
Confidence 99999999987653 21 3445544443 57799999999999998776211 11122222
Q ss_pred CCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCc
Q 043360 607 SSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE 686 (1108)
Q Consensus 607 ~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~ 686 (1108)
..++..+. +|.. + .-|++..+.+.-... .. ..+..+.+..+|..++.++.
T Consensus 475 -----G~Gv~~~v-~g~~---v---~vG~~~~~~~~~~~~-------------~~-~~~~~~~~~~~G~t~v~va~---- 524 (713)
T COG2217 475 -----GRGVEAEV-DGER---V---LVGNARLLGEEGIDL-------------PL-LSERIEALESEGKTVVFVAV---- 524 (713)
T ss_pred -----cCcEEEEE-CCEE---E---EEcCHHHHhhcCCCc-------------cc-hhhhHHHHHhcCCeEEEEEE----
Confidence 45555544 4432 4 449998875432110 11 55677888899999899998
Q ss_pred chhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHH
Q 043360 687 VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNST 762 (1108)
Q Consensus 687 ~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~ 762 (1108)
|-.++|++++ |||++++|++||+.|+++.|+||||..+|++||+++||.+
T Consensus 525 -------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------- 578 (713)
T COG2217 525 -------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------- 578 (713)
T ss_pred -------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-------------------
Confidence 4499999999 9999999999999999999999999999999999999975
Q ss_pred HHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--cccc
Q 043360 763 ERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGS 840 (1108)
Q Consensus 763 ~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~ 840 (1108)
++|.+.|+||.++|+.||++|++|+|+|| |+||+|||++|||||||| +|+|+|+++||++|+ +++.
T Consensus 579 ----------v~AellPedK~~~V~~l~~~g~~VamVGD-GINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~ 646 (713)
T COG2217 579 ----------VRAELLPEDKAEIVRELQAEGRKVAMVGD-GINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSA 646 (713)
T ss_pred ----------heccCCcHHHHHHHHHHHhcCCEEEEEeC-CchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHH
Confidence 99999999999999999999999999999 999999999999999999 699999999999999 8999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHH
Q 043360 841 LLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVT 876 (1108)
Q Consensus 841 I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~ 876 (1108)
+++++..+|+++++|++++.|.+.||++++.++..+
T Consensus 647 v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 647 VPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999888776
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-70 Score=679.36 Aligned_cols=508 Identities=19% Similarity=0.241 Sum_probs=419.9
Q ss_pred CchHHHHHHHHhhhh----HHHHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHh
Q 043360 233 AREFFLFLLKASNNF----NILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEE 308 (1108)
Q Consensus 233 ~~s~~~~l~~~~~~~----~~i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~ 308 (1108)
..+|++..|+.++.. +..+..++++.+++.+ .|.++..+++++++...++.+.+.+..+..++|. .
T Consensus 170 ~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~--------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~--~ 239 (741)
T PRK11033 170 LYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG--------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALM--A 239 (741)
T ss_pred HHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--h
Confidence 357888889988642 4555556666677666 4788887777777777888888888889999998 7
Q ss_pred hcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCCCeeeecceEeece
Q 043360 309 KNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRNPFLFSGSKVMEGH 384 (1108)
Q Consensus 309 ~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~~~l~~Gt~v~~G~ 384 (1108)
..+.+++|+|||++++|++++|+|||+|.|++||+|||||++++|+. .|||| |||||.| ..++.+|+||.+.+|.
T Consensus 240 l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~-~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~ 318 (741)
T PRK11033 240 LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERATGEKVPAGATSVDRL 318 (741)
T ss_pred CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE-EeecccccCCCCCEecCCCCeeccCCEEcCce
Confidence 88999999999999999999999999999999999999999999986 99999 9999999 7789999999999999
Q ss_pred EEEEEEEeccccHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchh
Q 043360 385 GTMLLISVGGNIASGQVLRSN-----------------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVM 447 (1108)
Q Consensus 385 ~~~~Vv~tG~~T~~g~i~~~~-----------------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 447 (1108)
+++.|+++|.+|.++++.+.+ ..++..+++++.++...++...
T Consensus 319 ~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~-------------------- 378 (741)
T PRK11033 319 VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLL-------------------- 378 (741)
T ss_pred EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 999999999999999999877 1222222222222222111110
Q ss_pred hhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccc
Q 043360 448 KIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVC 527 (1108)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~ 527 (1108)
....+...+..++++++++|||+|.+++|+++..++.++ +|+|+++|+.+++|+|+++|+||||||||||+
T Consensus 379 --------~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~a-ar~gilik~~~alE~l~~v~~v~fDKTGTLT~ 449 (741)
T PRK11033 379 --------FAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA-ARRGALIKGGAALEQLGRVTTVAFDKTGTLTE 449 (741)
T ss_pred --------ccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH-HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcC
Confidence 001445678889999999999999999999999999999 99999999999999999999999999999999
Q ss_pred cceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCC
Q 043360 528 NRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLS 607 (1108)
Q Consensus 528 n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~ 607 (1108)
|+|+|.+++..+. +. .++++.+.... +..+.||+++|+++++++.+.+ +||.
T Consensus 450 g~~~v~~~~~~~~-~~-------~~~~l~~aa~~-------e~~s~hPia~Ai~~~a~~~~~~-------------~~~~ 501 (741)
T PRK11033 450 GKPQVTDIHPATG-IS-------ESELLALAAAV-------EQGSTHPLAQAIVREAQVRGLA-------------IPEA 501 (741)
T ss_pred CceEEEEEEecCC-CC-------HHHHHHHHHHH-------hcCCCCHHHHHHHHHHHhcCCC-------------CCCC
Confidence 9999999976432 11 12333332211 3568899999999999876543 3566
Q ss_pred CCCCeE---EEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEec
Q 043360 608 SNNKVC---GVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQ 684 (1108)
Q Consensus 608 s~rkrm---sviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~ 684 (1108)
++++.+ ++.... +|.. + ..|+++.+.+. .+.+.+.++++..+|+|++++|+
T Consensus 502 ~~~~~~~g~Gv~~~~-~g~~---~---~ig~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~v~va~-- 555 (741)
T PRK11033 502 ESQRALAGSGIEGQV-NGER---V---LICAPGKLPPL-----------------ADAFAGQINELESAGKTVVLVLR-- 555 (741)
T ss_pred cceEEEeeEEEEEEE-CCEE---E---EEecchhhhhc-----------------cHHHHHHHHHHHhCCCEEEEEEE--
Confidence 666655 233222 3432 3 34888877431 12345567788999999999998
Q ss_pred CcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcC
Q 043360 685 TEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELN 760 (1108)
Q Consensus 685 l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~ 760 (1108)
|.+++|++++ |||++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 556 ---------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------------------ 608 (741)
T PRK11033 556 ---------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID------------------ 608 (741)
T ss_pred ---------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------
Confidence 4599999999 999999999999999999999999999999999999995
Q ss_pred HHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--cc
Q 043360 761 STERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AV 838 (1108)
Q Consensus 761 ~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f 838 (1108)
.+++++|+||.++|+.+|+. +.|+|+|| |.||+|||++|||||+|| +|++.++++||+++. ++
T Consensus 609 ------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGD-giNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l 673 (741)
T PRK11033 609 ------------FRAGLLPEDKVKAVTELNQH-APLAMVGD-GINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRL 673 (741)
T ss_pred ------------eecCCCHHHHHHHHHHHhcC-CCEEEEEC-CHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCH
Confidence 46789999999999999965 58999999 999999999999999999 899999999999999 99
Q ss_pred ccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHH
Q 043360 839 GSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVT 876 (1108)
Q Consensus 839 ~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~ 876 (1108)
..|.+++++||++++||++++.|.+.+|++++.+++++
T Consensus 674 ~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 674 RGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999988877654
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-70 Score=658.06 Aligned_cols=467 Identities=27% Similarity=0.405 Sum_probs=399.8
Q ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeee
Q 043360 281 IAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDD 360 (1108)
Q Consensus 281 ~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~Vde 360 (1108)
+++++..+++.+.+++.++..+++.++..++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.|||
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vde 81 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDE 81 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEc
Confidence 3456667888889999999999998223788999999999 999999999999999999999999999999996 59999
Q ss_pred c-ccCCCCC---CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH----------------HH--HHHHHHHHHHH
Q 043360 361 V-LNSEIDP---DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN----------------LS--LAVTVLIALVA 418 (1108)
Q Consensus 361 S-LTGES~p---~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~----------------~~--~~~~~l~~i~l 418 (1108)
| |||||.| .+++.+++||.+.+|.+++.|+.+|.+|..+++...+ +. .++.+++++++
T Consensus 82 s~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 82 SNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred ccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9 9999999 6689999999999999999999999999999988777 32 22222222222
Q ss_pred HHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhcc
Q 043360 419 LIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINH 498 (1108)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~ 498 (1108)
+...++.... + ...++...+..++++++++|||+|++++++++..+..+| +++
T Consensus 162 ~~~~~~~~~~--------~------------------~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~-~~~ 214 (499)
T TIGR01494 162 AVFLFWAIGL--------W------------------DPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL-AKK 214 (499)
T ss_pred HHHHHHHHHH--------c------------------ccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH-HHC
Confidence 2222221110 0 000256789999999999999999999999999999999 999
Q ss_pred ccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHH
Q 043360 499 HAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTD 578 (1108)
Q Consensus 499 ~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ 578 (1108)
|+++|+++++|+||+++++|||||||||+|+|+|+++++.+. ++.++||+|.
T Consensus 215 gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~----------------------------~~~s~hp~~~ 266 (499)
T TIGR01494 215 GIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG----------------------------EYLSGHPDER 266 (499)
T ss_pred CcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------CcCCCChHHH
Confidence 999999999999999999999999999999999999987542 1347899999
Q ss_pred HHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchh
Q 043360 579 WLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKG 658 (1108)
Q Consensus 579 ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~ 658 (1108)
|+++++++. .++..||++.+|+|+++++.++ + .|+||+++.+++.|.+
T Consensus 267 ai~~~~~~~------------~~~~~~f~~~~~~~~~~~~~~~-~------~~~~G~~~~i~~~~~~------------- 314 (499)
T TIGR01494 267 ALVKSAKWK------------ILNVFEFSSVRKRMSVIVRGPD-G------TYVKGAPEFVLSRVKD------------- 314 (499)
T ss_pred HHHHHhhhc------------CcceeccCCCCceEEEEEecCC-c------EEEeCCHHHHHHhhHH-------------
Confidence 999998752 1356799999999999997522 2 3689999999998853
Q ss_pred hHHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHH
Q 043360 659 EKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTE 734 (1108)
Q Consensus 659 ~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~ 734 (1108)
+.+.+++++.+|+|++++|++. +++|++++ |++++++|+.|+++|++++|+|||+..+|..
T Consensus 315 ----~~~~~~~~~~~g~~~~~~a~~~-----------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ 379 (499)
T TIGR01494 315 ----LEEKVKELAQSGLRVLAVASKE-----------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKA 379 (499)
T ss_pred ----HHHHHHHHHhCCCEEEEEEECC-----------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 2234456788999999999966 89999999 9999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCC
Q 043360 735 VACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEAD 814 (1108)
Q Consensus 735 IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~Ad 814 (1108)
+|+++|| ++|++|+||.++|+.+|+.|+.|+|+|| |.||+|||++||
T Consensus 380 ia~~lgi--------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGD-g~nD~~al~~Ad 426 (499)
T TIGR01494 380 IAKELGI--------------------------------FARVTPEEKAALVEALQKKGRVVAMTGD-GVNDAPALKKAD 426 (499)
T ss_pred HHHHcCc--------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECC-ChhhHHHHHhCC
Confidence 9999986 5789999999999999999999999999 999999999999
Q ss_pred ccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHHH
Q 043360 815 VGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIW 892 (1108)
Q Consensus 815 VGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~ 892 (1108)
|||||| |+++||++++ ++..+..++.+||++++++++++.|.+++|++.+++++++.+
T Consensus 427 vgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~-------------- 486 (499)
T TIGR01494 427 VGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV-------------- 486 (499)
T ss_pred Cccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Confidence 999997 6899999999 799999999999999999999999999999998887776442
Q ss_pred HHHHHhHHHHHh
Q 043360 893 VYSIMYMLGGLI 904 (1108)
Q Consensus 893 ~nli~~~l~~l~ 904 (1108)
+|++++..++++
T Consensus 487 ~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 LNLVPPGLAALA 498 (499)
T ss_pred HHHHhcchhhhc
Confidence 677777766543
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-67 Score=641.24 Aligned_cols=500 Identities=23% Similarity=0.309 Sum_probs=405.8
Q ss_pred HHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECC-EEEEEEcc
Q 043360 250 LLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSG-REQLIAVS 328 (1108)
Q Consensus 250 i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG-~~~~I~~~ 328 (1108)
.++.++++++++.+ .|.++..+++++++..+++.+.+++.++.++++. ...+..++|+||| ++++|+++
T Consensus 3 ~l~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~--~~~~~~~~v~r~~g~~~~i~~~ 72 (556)
T TIGR01525 3 LLMALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALL--ALAPSTARVLQGDGSEEEVPVE 72 (556)
T ss_pred HHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCEEEEEECCCeEEEEEHH
Confidence 45566667777776 4888888888888888999999999999988888 7778899999996 99999999
Q ss_pred ccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHH
Q 043360 329 NLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRS 404 (1108)
Q Consensus 329 dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~ 404 (1108)
||+|||+|.+++||+|||||++++|+. .|||| |||||.| .+++.+|+||.+.+|.++++|+++|.+|++|++.+.
T Consensus 73 ~l~~GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~ 151 (556)
T TIGR01525 73 ELQVGDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKL 151 (556)
T ss_pred HCCCCCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHH
Confidence 999999999999999999999999986 99999 9999999 788999999999999999999999999999999876
Q ss_pred H----------------HH-HHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHH
Q 043360 405 N----------------LS-LAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSA 467 (1108)
Q Consensus 405 ~----------------~~-~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 467 (1108)
+ +. .++.+++++..+...++.... .. ..+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~------------------------------~~-~~~~~~ 200 (556)
T TIGR01525 152 VEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG------------------------------AL-GALYRA 200 (556)
T ss_pred HHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------------------cc-hHHHHH
Confidence 6 11 111111111111111111110 11 568899
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcc
Q 043360 468 LTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVA 547 (1108)
Q Consensus 468 i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~ 547 (1108)
+++++++|||+|++++++++..+++++ +++|+++|+++++|+||++|++|||||||||+|+|+|.++...+....
T Consensus 201 ~~vlv~~~P~al~l~~~~~~~~~~~~~-~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~---- 275 (556)
T TIGR01525 201 LAVLVVACPCALGLATPVAILVAIGVA-ARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASI---- 275 (556)
T ss_pred HHHHhhccccchhehhHHHHHHHHHHH-HHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCc----
Confidence 999999999999999999999999999 999999999999999999999999999999999999999986543210
Q ss_pred hhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCccee
Q 043360 548 SEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKI 627 (1108)
Q Consensus 548 ~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~ 627 (1108)
..++++++...+ +....||+++|+++++++.+.+... . + ..+.++ .+ ++.... +|.
T Consensus 276 --~~~~~l~~a~~~-------e~~~~hp~~~Ai~~~~~~~~~~~~~--~-~-~~~~~~----~~--gi~~~~-~g~---- 331 (556)
T TIGR01525 276 --SEEELLALAAAL-------EQSSSHPLARAIVRYAKKRGLELPK--Q-E-DVEEVP----GK--GVEATV-DGQ---- 331 (556)
T ss_pred --cHHHHHHHHHHH-------hccCCChHHHHHHHHHHhcCCCccc--c-c-CeeEec----CC--eEEEEE-CCe----
Confidence 012333332211 3457899999999999987765321 1 0 111111 11 222222 231
Q ss_pred EEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec----
Q 043360 628 MHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL---- 703 (1108)
Q Consensus 628 ~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i---- 703 (1108)
..+..|+++.+ + + ++. .....++.+++++.+|+|+++++. |.+++|.+.+
T Consensus 332 -~~~~lg~~~~~-~-~------~~~------~~~~~~~~~~~~~~~g~~~~~v~~-----------~~~~~g~i~~~d~~ 385 (556)
T TIGR01525 332 -EEVRIGNPRLL-E-L------AAE------PISASPDLLNEGESQGKTVVFVAV-----------DGELLGVIALRDQL 385 (556)
T ss_pred -eEEEEecHHHH-h-h------cCC------CchhhHHHHHHHhhCCcEEEEEEE-----------CCEEEEEEEecccc
Confidence 12344777655 1 1 111 012234566778899999999997 4599999999
Q ss_pred ccchHHHHHHHHHcC-CEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNAG-VRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aG-I~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
|||++++|+.|+++| ++++|+|||+..+|.++++++|+.. +|+++.|++|
T Consensus 386 ~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-----------------------------~f~~~~p~~K 436 (556)
T TIGR01525 386 RPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-----------------------------VHAELLPEDK 436 (556)
T ss_pred hHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-----------------------------eeccCCHHHH
Confidence 999999999999999 9999999999999999999999965 8999999999
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhh
Q 043360 783 LLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTK 860 (1108)
Q Consensus 783 ~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~ 860 (1108)
.++++.+++.++.|+|+|| |.||++|+++||||+++| ++++.++++||+++. ++..|.+++++||++++++++++.
T Consensus 437 ~~~v~~l~~~~~~v~~vGD-g~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~ 514 (556)
T TIGR01525 437 LAIVKELQEEGGVVAMVGD-GINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLA 514 (556)
T ss_pred HHHHHHHHHcCCEEEEEEC-ChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999999999999999999 799999999999999 999999999999999999999999
Q ss_pred hHhhcchhhHHHHHHHH
Q 043360 861 LQLTGCASGLLITLVTT 877 (1108)
Q Consensus 861 ~~l~~ni~~i~~~~~~~ 877 (1108)
|.+.+|++.+.+++.+.
T Consensus 515 ~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 515 WALGYNLVAIPLAAGGL 531 (556)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999988776554
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-68 Score=631.97 Aligned_cols=573 Identities=19% Similarity=0.235 Sum_probs=451.5
Q ss_pred CCchHHHHHHHHhhhh---HHHHHHHHHHHhhcccccc------CCCCCCcchhHHHHHHHHHHh-chhhHHHHHHHHHH
Q 043360 232 HAREFFLFLLKASNNF---NILLLLVAAALSFVTGTIE------QGPKDGWHDGAAILIAVFVLL-TFPAVTNFRRARKL 301 (1108)
Q Consensus 232 ~~~s~~~~l~~~~~~~---~~i~lli~ails~~~~~~~------~~~~~~~~~~~~il~~vl~v~-~v~~~~~~~~~~~~ 301 (1108)
.+.+|+...|+.+++. ++.+..+++..++++++.. .+.+..|+|...+++.++.+. +++....++....+
T Consensus 290 ~G~~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~al 369 (951)
T KOG0207|consen 290 GGRPFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEAL 369 (951)
T ss_pred cceeeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHHH
Confidence 4578999999999887 4555555555554444311 122446888888877766664 77777777888888
Q ss_pred HHHHHHhhcCcEEEEEECCE-EEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCCCeeee
Q 043360 302 EKKQWEEKNKLEVKVVRSGR-EQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRNPFLFS 376 (1108)
Q Consensus 302 ~~l~~~~~~~~~v~ViRdG~-~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~~~l~~ 376 (1108)
.+|. ...+.++.++.+|+ +++|+.+.|.+||+|.|.||++||+||++++|++ +|||| +|||+.| ++++.+.+
T Consensus 370 skLm--sl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~Via 446 (951)
T KOG0207|consen 370 SKLM--SLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKKKGSTVIA 446 (951)
T ss_pred HHHh--hcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccCCCCeeee
Confidence 8888 78899999999997 8999999999999999999999999999999998 99999 9999999 88999999
Q ss_pred cceEeeceEEEEEEEeccccHHHHHHHHH-----------------HHH---HHHHHHHHHHHHHHHHhccCCCCCCCcc
Q 043360 377 GSKVMEGHGTMLLISVGGNIASGQVLRSN-----------------LSL---AVTVLIALVALIRLLWRKHSGDDHELPE 436 (1108)
Q Consensus 377 Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~-----------------~~~---~~~~l~~i~l~~~~~~~~~~~~~~~~~~ 436 (1108)
||.+.+|.....++++|.||.+++|.+++ .++ ++.++.++.++++++.+.+ .......
T Consensus 447 GsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~--~~~~~~~ 524 (951)
T KOG0207|consen 447 GSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKI--VFKYPRS 524 (951)
T ss_pred eeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccc--cccCcch
Confidence 99999999999999999999999999988 222 2333333333344444432 1111111
Q ss_pred ccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceE
Q 043360 437 LKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASV 516 (1108)
Q Consensus 437 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~ 516 (1108)
| ...+...|..++++++++|||+|.|++|++...+.... +++|+|+|..+++|.+.++++
T Consensus 525 ~-------------------~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg-A~nGvLIKGge~LE~~hkv~t 584 (951)
T KOG0207|consen 525 F-------------------FDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG-ATNGVLIKGGEALEKAHKVKT 584 (951)
T ss_pred h-------------------hHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh-hhcceEEcCcHHHHHHhcCCE
Confidence 1 13677889999999999999999999999999999999 999999999999999999999
Q ss_pred EEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcc
Q 043360 517 ICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQ 596 (1108)
Q Consensus 517 Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~ 596 (1108)
|.||||||||+|+++|.++....+.... .+.+.+.... +..+.||..+|+++||++..... .
T Consensus 585 VvFDKTGTLT~G~~~V~~~~~~~~~~~~-------~e~l~~v~a~-------Es~SeHPig~AIv~yak~~~~~~----~ 646 (951)
T KOG0207|consen 585 VVFDKTGTLTEGKPTVVDFKSLSNPISL-------KEALALVAAM-------ESGSEHPIGKAIVDYAKEKLVEP----N 646 (951)
T ss_pred EEEcCCCceecceEEEEEEEecCCcccH-------HHHHHHHHHH-------hcCCcCchHHHHHHHHHhccccc----C
Confidence 9999999999999999999887654221 2233333222 56789999999999999776211 1
Q ss_pred cceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCe
Q 043360 597 NLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLR 676 (1108)
Q Consensus 597 ~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR 676 (1108)
.-.++....|..+.+. +-++. ++.+ .+-|.-+.+...-.. ..+++++.+++....|..
T Consensus 647 ~~~~~~~~~~pg~g~~--~~~~~-~~~~------i~iGN~~~~~r~~~~-------------~~~~i~~~~~~~e~~g~t 704 (951)
T KOG0207|consen 647 PEGVLSFEYFPGEGIY--VTVTV-DGNE------VLIGNKEWMSRNGCS-------------IPDDILDALTESERKGQT 704 (951)
T ss_pred ccccceeecccCCCcc--cceEE-eeeE------EeechHHHHHhcCCC-------------CchhHHHhhhhHhhcCce
Confidence 1122233333333322 22222 2221 345888887643221 134588888889999999
Q ss_pred EEEEEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccc
Q 043360 677 PIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALE 752 (1108)
Q Consensus 677 ~L~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~ 752 (1108)
+.++++.. +++|++++ |||+..+|+.||+.||++.|+||||..||+++|+++||..
T Consensus 705 vv~v~vn~-----------~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~--------- 764 (951)
T KOG0207|consen 705 VVYVAVNG-----------QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN--------- 764 (951)
T ss_pred EEEEEECC-----------EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce---------
Confidence 99999954 99999999 9999999999999999999999999999999999999665
Q ss_pred hhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccc
Q 043360 753 GEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD 832 (1108)
Q Consensus 753 G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aAD 832 (1108)
|+|.+.|+||.++|+.+|++++.|+|+|| |+||+|||.+|||||+|| .|+++|.++||
T Consensus 765 --------------------V~aev~P~~K~~~Ik~lq~~~~~VaMVGD-GINDaPALA~AdVGIaig-~gs~vAieaAD 822 (951)
T KOG0207|consen 765 --------------------VYAEVLPEQKAEKIKEIQKNGGPVAMVGD-GINDAPALAQADVGIAIG-AGSDVAIEAAD 822 (951)
T ss_pred --------------------EEeccCchhhHHHHHHHHhcCCcEEEEeC-CCCccHHHHhhccceeec-cccHHHHhhCC
Confidence 99999999999999999999999999999 999999999999999999 78999999999
Q ss_pred hhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcC--CCchhHHHHHHHHHHHhHHHHHhhh-c
Q 043360 833 IVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILE--ESPITSIQLIWVYSIMYMLGGLIMR-M 907 (1108)
Q Consensus 833 ivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~--~~pl~~~qll~~nli~~~l~~l~la-~ 907 (1108)
|+|+ ++..++.++..+|++..|++.++.|.++||++++.++....+..+ -.|.-+...+..+.+--.+-++.|- +
T Consensus 823 IVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~ 902 (951)
T KOG0207|consen 823 IVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRY 902 (951)
T ss_pred EEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhc
Confidence 9999 999999999999999999999999999999998887765443333 2333334444455555555555554 3
Q ss_pred ccCC
Q 043360 908 EFKD 911 (1108)
Q Consensus 908 e~~~ 911 (1108)
.+|+
T Consensus 903 k~p~ 906 (951)
T KOG0207|consen 903 KKPT 906 (951)
T ss_pred cccc
Confidence 5554
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-66 Score=629.01 Aligned_cols=479 Identities=23% Similarity=0.292 Sum_probs=397.8
Q ss_pred HHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccc
Q 043360 250 LLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSN 329 (1108)
Q Consensus 250 i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~d 329 (1108)
.++.++++++++.+ .|+++..+++++++...++.+.+++.++..+++. ...+.+++|+|||+++++++++
T Consensus 3 ~l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~--~~~~~~~~v~r~g~~~~i~~~~ 72 (536)
T TIGR01512 3 LLMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALM--ELAPDTARVLRGGSLEEVAVEE 72 (536)
T ss_pred HHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCEEEEEECCEEEEEEHHH
Confidence 45667777777777 5999988888888888889999999999988888 7788999999999999999999
Q ss_pred cccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH
Q 043360 330 LLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN 405 (1108)
Q Consensus 330 LvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~ 405 (1108)
|+|||+|.+++||+|||||++++|+. .|||| |||||.| .+++.+|+||.+.+|+++++|++||.+|.+|++.+.+
T Consensus 73 l~~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~ 151 (536)
T TIGR01512 73 LKVGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLV 151 (536)
T ss_pred CCCCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHH
Confidence 99999999999999999999999986 99999 9999999 7889999999999999999999999999999998776
Q ss_pred ----------------HH-HHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHH
Q 043360 406 ----------------LS-LAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSAL 468 (1108)
Q Consensus 406 ----------------~~-~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 468 (1108)
+. .++.++.+++++..+++.... .+...+..++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~ 201 (536)
T TIGR01512 152 EEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK------------------------------RWPFWVYRAL 201 (536)
T ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------------------------ccHHHHHHHH
Confidence 11 222222222222222222110 1112678899
Q ss_pred HHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcch
Q 043360 469 TVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVAS 548 (1108)
Q Consensus 469 ~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 548 (1108)
++++++|||+|++++++++..++.++ +++|+++|+++++|++|+++++|||||||||+|+|+|.+++..
T Consensus 202 svlv~~~P~aL~la~~~~~~~~~~~~-~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------- 270 (536)
T TIGR01512 202 VLLVVASPCALVISAPAAYLSAISAA-ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------- 270 (536)
T ss_pred HHHhhcCccccccchHHHHHHHHHHH-HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----------
Confidence 99999999999999999999999999 9999999999999999999999999999999999999998631
Q ss_pred hhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeE
Q 043360 549 EINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIM 628 (1108)
Q Consensus 549 ~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~ 628 (1108)
++++..... +..+.||.++|+++++++.+ .+ +-.+.+| ..++.... +|.+ +
T Consensus 271 ----~~l~~a~~~-------e~~~~hp~~~Ai~~~~~~~~-~~-------~~~~~~~------g~gi~~~~-~g~~---~ 321 (536)
T TIGR01512 271 ----EVLRLAAAA-------EQASSHPLARAIVDYARKRE-NV-------ESVEEVP------GEGVRAVV-DGGE---V 321 (536)
T ss_pred ----HHHHHHHHH-------hccCCCcHHHHHHHHHHhcC-CC-------cceEEec------CCeEEEEE-CCeE---E
Confidence 223332211 35678999999999998654 11 1112222 12332222 3432 3
Q ss_pred EEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec----c
Q 043360 629 HMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----R 704 (1108)
Q Consensus 629 ~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i----r 704 (1108)
..|+++.+.+.. ...+..+|.+++.++. |..++|.+.+ |
T Consensus 322 ---~ig~~~~~~~~~-----------------------~~~~~~~~~~~~~v~~-----------~~~~~g~i~~~d~l~ 364 (536)
T TIGR01512 322 ---RIGNPRSLEAAV-----------------------GARPESAGKTIVHVAR-----------DGTYLGYILLSDEPR 364 (536)
T ss_pred ---EEcCHHHHhhcC-----------------------CcchhhCCCeEEEEEE-----------CCEEEEEEEEeccch
Confidence 348887653311 0145667888887776 5699999999 9
Q ss_pred cchHHHHHHHHHcCC-EEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 705 EEIKSTVEALRNAGV-RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 705 ~~v~~aI~~l~~aGI-~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
||++++|+.|+++|+ +++|+|||+..+|..+++++|+.. +|+++.|++|.
T Consensus 365 ~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-----------------------------~f~~~~p~~K~ 415 (536)
T TIGR01512 365 PDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-----------------------------VHAELLPEDKL 415 (536)
T ss_pred HHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-----------------------------hhhccCcHHHH
Confidence 999999999999999 999999999999999999999975 78999999999
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhh
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKL 861 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~ 861 (1108)
++++.++++++.|+|+|| |.||++|+++||+||+||.+|++.++++||+++. ++..|.+++.+||++++++++++.|
T Consensus 416 ~~i~~l~~~~~~v~~vGD-g~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~ 494 (536)
T TIGR01512 416 EIVKELREKYGPVAMVGD-GINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVI 494 (536)
T ss_pred HHHHHHHhcCCEEEEEeC-CHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999996689999999999996 9999999999999999999999999
Q ss_pred HhhcchhhHHHHHHH
Q 043360 862 QLTGCASGLLITLVT 876 (1108)
Q Consensus 862 ~l~~ni~~i~~~~~~ 876 (1108)
++.+|++.+.+++++
T Consensus 495 a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 495 ALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999988888765
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-65 Score=623.38 Aligned_cols=509 Identities=21% Similarity=0.264 Sum_probs=407.5
Q ss_pred CchHHHHHHHHhhhh---HHHHHHHHHHHhhcccccc--------CCCCCCcchhHHHHHHHHHHh-chhhHHHHHHHHH
Q 043360 233 AREFFLFLLKASNNF---NILLLLVAAALSFVTGTIE--------QGPKDGWHDGAAILIAVFVLL-TFPAVTNFRRARK 300 (1108)
Q Consensus 233 ~~s~~~~l~~~~~~~---~~i~lli~ails~~~~~~~--------~~~~~~~~~~~~il~~vl~v~-~v~~~~~~~~~~~ 300 (1108)
+.+|++..|+.+++. +..+..++++.+++++.+. .+...+|++.+++++++++.. +++.+...+..+.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~ 81 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDA 81 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357888889888754 4555555555555543211 111235888887766555554 7777777788888
Q ss_pred HHHHHHHhhcCcEEEEEEC-CEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCCCeee
Q 043360 301 LEKKQWEEKNKLEVKVVRS-GREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRNPFLF 375 (1108)
Q Consensus 301 ~~~l~~~~~~~~~v~ViRd-G~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~~~l~ 375 (1108)
+++|. ...+.+++|+|+ |++++|+.++|+|||+|.|++||+|||||++++|+. .|||| |||||.| ..++.+|
T Consensus 82 ~~~L~--~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs~pv~k~~gd~V~ 158 (562)
T TIGR01511 82 LSKLA--KLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDPVI 158 (562)
T ss_pred HHHHH--hcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCCCcEEcCCCCEEE
Confidence 88887 677889999985 677999999999999999999999999999999987 99999 9999999 7889999
Q ss_pred ecceEeeceEEEEEEEeccccHHHHHHHHH----------------HH-HHHHHHHHHHHHHHHHHhccCCCCCCCcccc
Q 043360 376 SGSKVMEGHGTMLLISVGGNIASGQVLRSN----------------LS-LAVTVLIALVALIRLLWRKHSGDDHELPELK 438 (1108)
Q Consensus 376 ~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~----------------~~-~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~ 438 (1108)
+||.+.+|.++++|+++|.+|.+|++.+.+ +. .++.++++++++...+
T Consensus 159 aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~--------------- 223 (562)
T TIGR01511 159 AGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVI--------------- 223 (562)
T ss_pred eeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHH---------------
Confidence 999999999999999999999999999877 21 2222222222111111
Q ss_pred ccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEE
Q 043360 439 GNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVIC 518 (1108)
Q Consensus 439 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic 518 (1108)
|...+..++++++++|||+|++++|+++..++.++ +++|+++|+.+++|+|+++|+||
T Consensus 224 ---------------------~~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a-a~~gIlik~~~~lE~l~~v~~i~ 281 (562)
T TIGR01511 224 ---------------------WLFALEFAVTVLIIACPCALGLATPTVIAVATGLA-AKNGVLIKDGDALERAANIDTVV 281 (562)
T ss_pred ---------------------HHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH-HHCCeEEcChHHHHHhhCCCEEE
Confidence 12357889999999999999999999999999999 99999999999999999999999
Q ss_pred EcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccc
Q 043360 519 IDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNL 598 (1108)
Q Consensus 519 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~ 598 (1108)
||||||||+|+|+|.++...+.. . .++++++.... +..+.||.++|+++++++.+.+....
T Consensus 282 fDKTGTLT~g~~~v~~i~~~~~~-~-------~~~~l~~aa~~-------e~~s~HPia~Ai~~~~~~~~~~~~~~---- 342 (562)
T TIGR01511 282 FDKTGTLTQGKPTVTDVHVFGDR-D-------RTELLALAAAL-------EAGSEHPLAKAIVSYAKEKGITLVEV---- 342 (562)
T ss_pred ECCCCCCcCCCEEEEEEecCCCC-C-------HHHHHHHHHHH-------hccCCChHHHHHHHHHHhcCCCcCCC----
Confidence 99999999999999999764321 1 12333333222 35578999999999998776543211
Q ss_pred eeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEE
Q 043360 599 SVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPI 678 (1108)
Q Consensus 599 ~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L 678 (1108)
+-.+.+| ..++.... ++.+ + ..|+++.+.+.... + .++..+|.+++
T Consensus 343 ~~~~~~~------g~Gi~~~~-~g~~---~---~iG~~~~~~~~~~~----------~-----------~~~~~~g~~~~ 388 (562)
T TIGR01511 343 SDFKAIP------GIGVEGTV-EGTK---I---QLGNEKLLGENAIK----------I-----------DGKAEQGSTSV 388 (562)
T ss_pred CCeEEEC------CceEEEEE-CCEE---E---EEECHHHHHhCCCC----------C-----------ChhhhCCCEEE
Confidence 1111111 23444433 3332 3 56999886432110 0 12346899999
Q ss_pred EEEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchh
Q 043360 679 AFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGE 754 (1108)
Q Consensus 679 ~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~ 754 (1108)
.++. |.+++|++++ ||+++++|+.|++.|++++|+|||+..+|..+++++||.
T Consensus 389 ~~~~-----------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------ 445 (562)
T TIGR01511 389 LVAV-----------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------ 445 (562)
T ss_pred EEEE-----------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------
Confidence 9887 5599999999 999999999999999999999999999999999999993
Q ss_pred hhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchh
Q 043360 755 QFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIV 834 (1108)
Q Consensus 755 ~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADiv 834 (1108)
+++++.|++|.++++.++++++.|+|+|| |.||++|+++|||||+|| .|++.++++||++
T Consensus 446 ------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGD-g~nD~~al~~A~vgia~g-~g~~~a~~~Advv 505 (562)
T TIGR01511 446 ------------------VRAEVLPDDKAALIKELQEKGRVVAMVGD-GINDAPALAQADVGIAIG-AGTDVAIEAADVV 505 (562)
T ss_pred ------------------EEccCChHHHHHHHHHHHHcCCEEEEEeC-CCccHHHHhhCCEEEEeC-CcCHHHHhhCCEE
Confidence 68899999999999999999999999999 999999999999999999 7999999999999
Q ss_pred hc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHH
Q 043360 835 IS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTT 877 (1108)
Q Consensus 835 l~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~ 877 (1108)
+. ++..|.++++.||++++++++++.|.+.+|++.+.+++.+.
T Consensus 506 l~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 506 LMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 98 99999999999999999999999999999999887776443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-65 Score=648.05 Aligned_cols=521 Identities=19% Similarity=0.258 Sum_probs=414.2
Q ss_pred CchHHHHHHHHhhhh---HHHHHHHHHHHhhccccc--------cCCCCCCcchhHHHHH-HHHHHhchhhHHHHHHHHH
Q 043360 233 AREFFLFLLKASNNF---NILLLLVAAALSFVTGTI--------EQGPKDGWHDGAAILI-AVFVLLTFPAVTNFRRARK 300 (1108)
Q Consensus 233 ~~s~~~~l~~~~~~~---~~i~lli~ails~~~~~~--------~~~~~~~~~~~~~il~-~vl~v~~v~~~~~~~~~~~ 300 (1108)
+.+|++..|+.+++. +..+..+++..+++++.. ..+..+.|++..++++ ++.+.-+++.....+..+.
T Consensus 234 g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~ 313 (834)
T PRK10671 234 GGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKA 313 (834)
T ss_pred hHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457888888888754 555555555555554321 1111123777655544 4444447777777777888
Q ss_pred HHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCCCeeee
Q 043360 301 LEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRNPFLFS 376 (1108)
Q Consensus 301 ~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~~~l~~ 376 (1108)
+++|. ...+..++|+|||++++|+.++|+|||+|.|++||+|||||++++|+. .|||| |||||.| ..++.+|+
T Consensus 314 ~~~L~--~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~-~vdeS~lTGEs~pv~k~~gd~V~a 390 (834)
T PRK10671 314 LEKLL--DLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEA-WLDEAMLTGEPIPQQKGEGDSVHA 390 (834)
T ss_pred HHHHh--ccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceE-EEeehhhcCCCCCEecCCCCEEEe
Confidence 88887 778999999999999999999999999999999999999999999975 99999 9999999 78999999
Q ss_pred cceEeeceEEEEEEEeccccHHHHHHHHH----------------H-HHHHHHHHHHHHHHHHHHhccCCCCCCCccccc
Q 043360 377 GSKVMEGHGTMLLISVGGNIASGQVLRSN----------------L-SLAVTVLIALVALIRLLWRKHSGDDHELPELKG 439 (1108)
Q Consensus 377 Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~----------------~-~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~ 439 (1108)
||.+.+|.+++.|+++|.+|.++++.+.+ + .+++.++++++++...+|.... . +
T Consensus 391 Gt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~-~------~-- 461 (834)
T PRK10671 391 GTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFG-P------A-- 461 (834)
T ss_pred cceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C------c--
Confidence 99999999999999999999999998877 1 2222222222222222221110 0 0
Q ss_pred cccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEE
Q 043360 440 NVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICI 519 (1108)
Q Consensus 440 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~ 519 (1108)
..+...+..++++++++|||+|++++|+++..++.++ +++|+++|+.+++|+||++|++||
T Consensus 462 ------------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~-a~~gilvk~~~~le~l~~v~~v~f 522 (834)
T PRK10671 462 ------------------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA-AEFGVLVRDADALQRASTLDTLVF 522 (834)
T ss_pred ------------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH-HHCCeEEecHHHHHhhcCCCEEEE
Confidence 0345678889999999999999999999999999999 999999999999999999999999
Q ss_pred cccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccce
Q 043360 520 DVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLS 599 (1108)
Q Consensus 520 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~ 599 (1108)
|||||||+|+|+|.++...+. +. ..+.+.+.... +..+.||+++|++++++.....
T Consensus 523 DKTGTLT~g~~~v~~~~~~~~-~~-------~~~~l~~a~~~-------e~~s~hp~a~Ai~~~~~~~~~~--------- 578 (834)
T PRK10671 523 DKTGTLTEGKPQVVAVKTFNG-VD-------EAQALRLAAAL-------EQGSSHPLARAILDKAGDMTLP--------- 578 (834)
T ss_pred cCCCccccCceEEEEEEccCC-CC-------HHHHHHHHHHH-------hCCCCCHHHHHHHHHHhhCCCC---------
Confidence 999999999999999875432 11 12223332222 3557899999999988643211
Q ss_pred eeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEE
Q 043360 600 VLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIA 679 (1108)
Q Consensus 600 il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~ 679 (1108)
+..+|+... ..++.... +|. .+.+|+++.+.+... ..+.+.+.+++++.+|.++++
T Consensus 579 --~~~~~~~~~-g~Gv~~~~-~g~------~~~~G~~~~~~~~~~--------------~~~~~~~~~~~~~~~g~~~v~ 634 (834)
T PRK10671 579 --QVNGFRTLR-GLGVSGEA-EGH------ALLLGNQALLNEQQV--------------DTKALEAEITAQASQGATPVL 634 (834)
T ss_pred --CcccceEec-ceEEEEEE-CCE------EEEEeCHHHHHHcCC--------------ChHHHHHHHHHHHhCCCeEEE
Confidence 111222221 23333332 343 246699998754211 123466677788899999999
Q ss_pred EEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhh
Q 043360 680 FACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQ 755 (1108)
Q Consensus 680 ~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~ 755 (1108)
+|++. .++|++++ ||+++++|+.|++.|+++.|+|||+..+|..+++++||..
T Consensus 635 va~~~-----------~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------ 691 (834)
T PRK10671 635 LAVDG-----------KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------ 691 (834)
T ss_pred EEECC-----------EEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------
Confidence 99844 89999999 9999999999999999999999999999999999999975
Q ss_pred hhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhh
Q 043360 756 FRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI 835 (1108)
Q Consensus 756 l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl 835 (1108)
+++++.|++|.++++.++++++.|+|+|| |.||++|++.||+||+|| +|++.++++||+++
T Consensus 692 -----------------~~~~~~p~~K~~~i~~l~~~~~~v~~vGD-g~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl 752 (834)
T PRK10671 692 -----------------VIAGVLPDGKAEAIKRLQSQGRQVAMVGD-GINDAPALAQADVGIAMG-GGSDVAIETAAITL 752 (834)
T ss_pred -----------------EEeCCCHHHHHHHHHHHhhcCCEEEEEeC-CHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEE
Confidence 89999999999999999999999999999 999999999999999999 79999999999999
Q ss_pred c--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHH
Q 043360 836 S--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITL 874 (1108)
Q Consensus 836 ~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~ 874 (1108)
+ ++..|.+++++||+++.+|++++.|.+.||++++.+++
T Consensus 753 ~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 753 MRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 99999999999999999999999999999999888775
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-55 Score=489.01 Aligned_cols=559 Identities=18% Similarity=0.254 Sum_probs=411.7
Q ss_pred HhhhhHHHHHHHHHHHhh----ccccccC-CCCCCcchhH--HHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEE
Q 043360 243 ASNNFNILLLLVAAALSF----VTGTIEQ-GPKDGWHDGA--AILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVK 315 (1108)
Q Consensus 243 ~~~~~~~i~lli~ails~----~~~~~~~-~~~~~~~~~~--~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ 315 (1108)
+.++|..+..++.+++.. ++.+... +....|.-.+ .+++.+++..+-+++.+-+-+.|...|+ +.+.+..++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr-~~~~~~~A~ 107 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLR-KTKTETIAR 107 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHH-HHHHHHHHH
Confidence 345565455445444443 3443322 2122333322 2334444455667788877777777777 555566777
Q ss_pred EEEC-CEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCC---CeeeecceEeeceEEE
Q 043360 316 VVRS-GREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRN---PFLFSGSKVMEGHGTM 387 (1108)
Q Consensus 316 ViRd-G~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~---~~l~~Gt~v~~G~~~~ 387 (1108)
++++ |.++.+++.+|+.||+|+++.||.||+||.+++|.. .|||| +||||.| +.+ .-+-.||.|.+...+.
T Consensus 108 ~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~i 186 (681)
T COG2216 108 LLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKI 186 (681)
T ss_pred HhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEE
Confidence 7776 899999999999999999999999999999999998 99999 9999999 222 5599999999999999
Q ss_pred EEEEeccccHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhc
Q 043360 388 LLISVGGNIASGQVLRSN-------------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFL 454 (1108)
Q Consensus 388 ~Vv~tG~~T~~g~i~~~~-------------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 454 (1108)
.+++.-.+|.+.|++.++ +.+++..++++.++.......+ ..|.+
T Consensus 187 rita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~-------a~y~~--------------- 244 (681)
T COG2216 187 RITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPF-------AIYSG--------------- 244 (681)
T ss_pred EEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhH-------HHHcC---------------
Confidence 999999999999999988 2223333322222211111000 00100
Q ss_pred cCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEE
Q 043360 455 LKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSK 534 (1108)
Q Consensus 455 ~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~ 534 (1108)
.-...+...++++++.+|-.+.--++.-=..+|.|+ .+.|++.++..++|..|.+|++..|||||+|-|+-.-.+
T Consensus 245 ----g~~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv-~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~ 319 (681)
T COG2216 245 ----GGAASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV-TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE 319 (681)
T ss_pred ----CCCcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHh-hhhceeecCcchhhhcCCccEEEecccCceeecchhhhh
Confidence 000124456778899999888877776667789999 999999999999999999999999999999999988888
Q ss_pred EEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEE
Q 043360 535 FCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCG 614 (1108)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrms 614 (1108)
++..+.... + ++...+..++. ....|.-+.+++.|++.+.+........ -....||+.+.|+++
T Consensus 320 f~p~~gv~~--------~---~la~aa~lsSl----~DeTpEGrSIV~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSG 383 (681)
T COG2216 320 FIPVPGVSE--------E---ELADAAQLASL----ADETPEGRSIVELAKKLGIELREDDLQS-HAEFVPFTAQTRMSG 383 (681)
T ss_pred eecCCCCCH--------H---HHHHHHHHhhh----ccCCCCcccHHHHHHHhccCCCcccccc-cceeeecceeccccc
Confidence 876554221 1 23333333443 2567888999999999886654322111 346789999988887
Q ss_pred EEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccC
Q 043360 615 VLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENG 694 (1108)
Q Consensus 615 viv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~ 694 (1108)
+-.. ++. -.-|||.+.|.+..+.. +| +.++.+++..++-++.|-..|+++..
T Consensus 384 vd~~--~~~------~irKGA~dai~~~v~~~---~g------~~p~~l~~~~~~vs~~GGTPL~V~~~----------- 435 (681)
T COG2216 384 VDLP--GGR------EIRKGAVDAIRRYVRER---GG------HIPEDLDAAVDEVSRLGGTPLVVVEN----------- 435 (681)
T ss_pred ccCC--CCc------eeecccHHHHHHHHHhc---CC------CCCHHHHHHHHHHHhcCCCceEEEEC-----------
Confidence 7553 222 35799999999876631 22 23577888999999999999999984
Q ss_pred ceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcc
Q 043360 695 LHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDS 770 (1108)
Q Consensus 695 l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~ 770 (1108)
-.++|++.+ +||.+|-+++||+.|||.+|+||||+.||..||++.|+.+
T Consensus 436 ~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd--------------------------- 488 (681)
T COG2216 436 GRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD--------------------------- 488 (681)
T ss_pred CEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh---------------------------
Confidence 499999999 9999999999999999999999999999999999999987
Q ss_pred cceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhh
Q 043360 771 MTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLG 848 (1108)
Q Consensus 771 ~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~G 848 (1108)
..|.++||+|.++|+.-|.+|+.|+|+|| |+||+|||.+||||+||. +||++||||+.+|=+ |...+.+.+..|
T Consensus 489 --fiAeatPEdK~~~I~~eQ~~grlVAMtGD-GTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IG 564 (681)
T COG2216 489 --FIAEATPEDKLALIRQEQAEGRLVAMTGD-GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIG 564 (681)
T ss_pred --hhhcCChHHHHHHHHHHHhcCcEEEEcCC-CCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhh
Confidence 79999999999999999999999999999 999999999999999999 899999999999988 888999999999
Q ss_pred hhhhhhhhhhhhhHhhcch---hhHHHHHHHHHh---------cCCCchhHHH-HHHHH-HHHhHHHHHhh
Q 043360 849 RCAYCNIQKFTKLQLTGCA---SGLLITLVTTLI---------LEESPITSIQ-LIWVY-SIMYMLGGLIM 905 (1108)
Q Consensus 849 R~~~~~i~k~i~~~l~~ni---~~i~~~~~~~~~---------~~~~pl~~~q-ll~~n-li~~~l~~l~l 905 (1108)
+...-.=-..-.|++..-+ .+++++.+..++ ...+|.+++. -+.+| ++.-.+..++|
T Consensus 565 KqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM~L~sP~SAilSAlIfNAlIIv~LIPLAl 635 (681)
T COG2216 565 KQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIMHLHSPQSAILSALIFNALIIVALIPLAL 635 (681)
T ss_pred hhheeecccceeeehhhHHHHHHHHHHHHHHhhcccccceeecccCCcHHHHHHHHHHHHHHHHHhHHHHh
Confidence 9876554444444443222 234444444433 1256666643 23334 33333444444
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-29 Score=273.77 Aligned_cols=203 Identities=25% Similarity=0.431 Sum_probs=162.2
Q ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcE-EEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEecCcee
Q 043360 279 ILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLE-VKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLM 357 (1108)
Q Consensus 279 il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~-v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~ 357 (1108)
+++++++..+++.+.++++++..++++ ...+.+ ++|+|||++++++++||+|||+|+|++||++||||++++...+.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~ 79 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLN--NLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC--TTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHh--ccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccc
Confidence 456677777889999999999999998 444545 99999999999999999999999999999999999999944569
Q ss_pred eeec-ccCCCCC---C-----CCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH----------------HHHHHHH
Q 043360 358 LDDV-LNSEIDP---D-----RNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN----------------LSLAVTV 412 (1108)
Q Consensus 358 VdeS-LTGES~p---~-----~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~----------------~~~~~~~ 412 (1108)
|||| +|||+.| . .++++|+||.+.+|.++++|++||.+|..|++.+.. +...+..
T Consensus 80 vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00122_consen 80 VDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILII 159 (230)
T ss_dssp EECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHh
Confidence 9999 9999999 6 899999999999999999999999999999998877 1112211
Q ss_pred HHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHh
Q 043360 413 LIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWND 492 (1108)
Q Consensus 413 l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~ 492 (1108)
++++..++.++.... . . ...++...+..+++++++++|++||+++++++.++++
T Consensus 160 ~~~~~~~~~~~~~~~--~-~-----------------------~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~ 213 (230)
T PF00122_consen 160 IILAIAILVFIIWFF--N-D-----------------------SGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAAR 213 (230)
T ss_dssp HHHHHHHHHHHHCHT--G-S-----------------------TTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHH
T ss_pred cccccchhhhcccee--c-c-----------------------cccccccccccccceeeeecccceeehHHHHHHHHHH
Confidence 111111111111111 0 0 1114557888999999999999999999999999999
Q ss_pred hhhhccccccCCCchhhc
Q 043360 493 KLLINHHAKPQNLSAGAT 510 (1108)
Q Consensus 493 ~m~~~~~ilvr~~~~~E~ 510 (1108)
+| +++|+++|+++++|+
T Consensus 214 ~~-~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 214 RL-AKNGIIVKNLSALEA 230 (230)
T ss_dssp HH-HHTTEEESSTTHHHH
T ss_pred HH-HHCCEEEeCcccccC
Confidence 99 999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-22 Score=214.98 Aligned_cols=207 Identities=25% Similarity=0.351 Sum_probs=146.2
Q ss_pred ceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhh
Q 043360 514 ASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEF 593 (1108)
Q Consensus 514 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~ 593 (1108)
+++||||||||||+|+|.+ .. +. ....++.+... +..+.||...+++.++......
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~----~~-------~~~~~~~~~~~-------~~~s~~p~~~~~~~~~~~~~~~--- 56 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP----PS-------NEAALAIAAAL-------EQGSEHPIGKAIVEFAKNHQWS--- 56 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES----CS-------HHHHHHHHHHH-------HCTSTSHHHHHHHHHHHHHHHH---
T ss_pred CeEEEEecCCCcccCeEEE---Ee----cc-------HHHHHHHHHHh-------hhcCCCcchhhhhhhhhhccch---
Confidence 5899999999999999999 00 11 13344444333 4568899999999998753211
Q ss_pred hcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhC
Q 043360 594 VDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDS 673 (1108)
Q Consensus 594 ~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~ 673 (1108)
.... +|.....+ ++.... ++ . +. |+++.+.+.+... ............+
T Consensus 57 --~~~~-----~~~~~~~~-~~~~~~-~~-----~--~~-g~~~~~~~~~~~~--------------~~~~~~~~~~~~~ 105 (215)
T PF00702_consen 57 --KSLE-----SFSEFIGR-GISGDV-DG-----I--YL-GSPEWIHELGIRV--------------ISPDLVEEIQESQ 105 (215)
T ss_dssp --SCCE-----EEEEETTT-EEEEEE-HC-----H--EE-HHHHHHHHHHHHH--------------HHHHHHHHHHHHH
T ss_pred --hhhh-----hheeeeec-cccccc-cc-----c--cc-ccchhhhhccccc--------------cccchhhhHHHhh
Confidence 0001 11111011 111100 11 1 11 8888776654421 1112222233555
Q ss_pred CCeEEEEEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCcc
Q 043360 674 GLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI 749 (1108)
Q Consensus 674 GlR~L~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~ 749 (1108)
|.+.+.++. ++.++|.+.+ ||+++++|+.|+++|++++|+|||+..+|.++|+++||...
T Consensus 106 ~~~~~~~~~-----------~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~----- 169 (215)
T PF00702_consen 106 GRTVIVLAV-----------NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS----- 169 (215)
T ss_dssp HHHCEEEEE-----------SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-----
T ss_pred CCcccceee-----------cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-----
Confidence 656666665 5699999999 99999999999999999999999999999999999999541
Q ss_pred ccchhhhhhcCHHHHHHHhcccceeccc--CHhhH--HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCC
Q 043360 750 ALEGEQFRELNSTERMAKLDSMTLMGSC--LADDK--LLLVQSVKEKGHVVAFFGGSSTRDTPALKEAD 814 (1108)
Q Consensus 750 vi~G~~l~~l~~~~~~~~~~~~~V~ar~--sP~~K--~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~Ad 814 (1108)
.+++++ +|++| .++++.||..++.|+|+|| |.||++|+++||
T Consensus 170 ----------------------~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGD-g~nD~~al~~Ag 215 (215)
T PF00702_consen 170 ----------------------IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGD-GVNDAPALKAAG 215 (215)
T ss_dssp ----------------------EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEES-SGGHHHHHHHSS
T ss_pred ----------------------cccccccccccchhHHHHHHHHhcCCCEEEEEcc-CHHHHHHHHhCc
Confidence 389999 99999 9999999977779999999 999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.6e-22 Score=206.80 Aligned_cols=171 Identities=27% Similarity=0.473 Sum_probs=145.6
Q ss_pred CCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 043360 882 ESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNR 961 (1108)
Q Consensus 882 ~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~~~~ 961 (1108)
+.|+++.|+||+|+++|.+|++++++|+|++++|+|||++++++++++++++.++.+|+++++++++.++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999998887776666554
Q ss_pred c-------ccchhhhHHHHHHHHHHHhhhhhccccccc--ccccchhHHHHHHHHHHHHHHHHHHH--hHhhhccccCCh
Q 043360 962 D-------IRKAMTFNSFTLCQVFNQFDAMRLLKKAVL--PVVLKKFNVLMVFLIVIAAQVLVVEF--ATSLAGYQRLNG 1030 (1108)
Q Consensus 962 ~-------~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f--~~~~~n~~~~~~i~~~~~~~~~~v~~--~~~~f~~~~l~~ 1030 (1108)
. ..+|+.|++++++|+++.+++|+.+ .++| ++.++|++++.++++++++|+++++. ++.+|++.++++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~-~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR-RSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS-STCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhccccccc-ccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 4 3899999999999999999999954 3444 48889999999999999999998876 799999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Q 043360 1031 MQWGICFILAVLPWGIHRAVNFI 1053 (1108)
Q Consensus 1031 ~~wl~~i~~~~~~l~~~~i~k~~ 1053 (1108)
.+|+++++.+++.+++.++.|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-17 Score=190.45 Aligned_cols=267 Identities=18% Similarity=0.252 Sum_probs=199.6
Q ss_pred ccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCc--------------------------
Q 043360 634 GTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTE-------------------------- 686 (1108)
Q Consensus 634 GA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~-------------------------- 686 (1108)
|-.+.+.+.|++++| +.+..|+ ...++++++...+-...|+ +++||||...
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 667889999999998 5567889 8888999998888777774 9999999863
Q ss_pred ---------------c----------------hhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHH
Q 043360 687 ---------------V----------------SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLA 731 (1108)
Q Consensus 687 ---------------~----------------~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~t 731 (1108)
. .+..-.+.+|+|++.. |++....|+.|-++.|+.+..+-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 0 0112256789999998 9999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCC--------CC--------------------------ccccchhh---------------hhhcCH-
Q 043360 732 VTEVACELGNFRPE--------SN--------------------------DIALEGEQ---------------FRELNS- 761 (1108)
Q Consensus 732 A~~IA~~~GI~~~~--------~~--------------------------~~vi~G~~---------------l~~l~~- 761 (1108)
.+-.|+++||...- ++ .+..+..+ |+.++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999997640 00 01111111 111110
Q ss_pred ------------------------HHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHH--HHhhCCc
Q 043360 762 ------------------------TERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTP--ALKEADV 815 (1108)
Q Consensus 762 ------------------------~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~--aLk~AdV 815 (1108)
++++.+-.-+..|..++|+.--++++.+|++|++|+++|. ..|-.. ..-+|||
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS-~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGS-CANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEecc-ccccccceEEEccce
Confidence 1111111112279999999999999999999999999999 888433 4578999
Q ss_pred cEecCC-------------Ccc-HHHHhccc-----------------hhhc--ccccHHHHHHhhhhhhhhhhhhhhhH
Q 043360 816 GITEEN-------------KCT-EMARECSD-----------------IVIS--AVGSLLPILKLGRCAYCNIQKFTKLQ 862 (1108)
Q Consensus 816 GIamg~-------------~gt-e~ak~aAD-----------------ivl~--~f~~I~~li~~GR~~~~~i~k~i~~~ 862 (1108)
+||+.. ..+ ..| +++| +-+- ..-.+.++|+.+|.....+|+++.|.
T Consensus 1015 SialD~l~~~~C~~e~fg~assisma-qandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFi 1093 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMA-QANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFI 1093 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhh-hhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 999631 000 012 2233 2222 33357888999999999999999999
Q ss_pred hhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhh
Q 043360 863 LTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMR 906 (1108)
Q Consensus 863 l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la 906 (1108)
++..+...+++|+..++..+..++.-+++|...+.. |.+.++
T Consensus 1094 Lq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~--PlL~i~ 1135 (1354)
T KOG4383|consen 1094 LQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI--PLLFIG 1135 (1354)
T ss_pred HHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH--HHHHHH
Confidence 999999999999999999999999999999998865 555555
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-14 Score=134.07 Aligned_cols=114 Identities=24% Similarity=0.340 Sum_probs=101.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
=++|+++|++|++. ++|.+.|||...+....|+-.||... ++++...|+.|+
T Consensus 32 f~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~---------------------------rv~a~a~~e~K~ 83 (152)
T COG4087 32 FSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE---------------------------RVFAGADPEMKA 83 (152)
T ss_pred cHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------eeecccCHHHHH
Confidence 68999999999999 99999999999999999999998763 399999999999
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe-cCCCc-cHHHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT-EENKC-TEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa-mg~~g-te~ak~aADivl~~f~~I~~li~ 846 (1108)
++++.|++.++.|.|+|| |+||.+||++||+||. ++..| .+-+.++||+++.+...++++++
T Consensus 84 ~ii~eLkk~~~k~vmVGn-GaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~ 147 (152)
T COG4087 84 KIIRELKKRYEKVVMVGN-GANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147 (152)
T ss_pred HHHHHhcCCCcEEEEecC-CcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhh
Confidence 999999999999999999 9999999999999998 44322 33366999999998888877753
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.1e-13 Score=125.08 Aligned_cols=71 Identities=23% Similarity=0.357 Sum_probs=63.1
Q ss_pred cCCChhHHHHHHHHHHcC--CChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccc
Q 043360 571 ISLWPTTDWLVSWAKSRS--LNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYY 646 (1108)
Q Consensus 571 ~~g~p~e~ALl~~a~~~g--~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~ 646 (1108)
..|+|+|.||+.++.+.| .+....+..+++++++||||+||||+|+++ .++ . +++|+|||||.||++|+++
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~-~---~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDG-K---YILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCC-E---EEEEcCCChHHHHHhcCCC
Confidence 689999999999999994 567788999999999999999999999998 233 2 7789999999999999863
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.6e-09 Score=93.68 Aligned_cols=64 Identities=23% Similarity=0.325 Sum_probs=61.1
Q ss_pred hCCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHh
Q 043360 196 IGGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALS 259 (1108)
Q Consensus 196 ~gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails 259 (1108)
..+++++++.|+|+..+||+++|+++|+++ |++++++++++|+.++++|.++++++|++++++|
T Consensus 3 ~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 3 QLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 467999999999999999999999999999 9999999999999999999999999999999986
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.3e-08 Score=105.66 Aligned_cols=126 Identities=18% Similarity=0.081 Sum_probs=95.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccch-hhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEG-EQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G-~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
+|++++.|+.+++.| ++.++||-....+..+++++|+..--.+.+.+++ ..+ ... .. ..+++|
T Consensus 70 ~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~---tG~----------~~--~~~~~K 133 (203)
T TIGR02137 70 LEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV---VGY----------QL--RQKDPK 133 (203)
T ss_pred CccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee---ECe----------ee--cCcchH
Confidence 899999999999975 9999999999999999999999642111122211 000 000 11 357799
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhcc-chhhc-ccccHHHHHHhh
Q 043360 783 LLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECS-DIVIS-AVGSLLPILKLG 848 (1108)
Q Consensus 783 ~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aA-Divl~-~f~~I~~li~~G 848 (1108)
..+++.+++.|..+.++|| |.||.+|++.||+||++. +.+..+++| |+-.. +.+.|..++.+.
T Consensus 134 ~~~l~~l~~~~~~~v~vGD-s~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 134 RQSVIAFKSLYYRVIAAGD-SYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHhhCCCEEEEeC-CHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 9999999988888999999 999999999999999996 566544444 55555 888888877654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.2e-08 Score=86.42 Aligned_cols=59 Identities=29% Similarity=0.389 Sum_probs=55.3
Q ss_pred HhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccc
Q 043360 205 AFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTG 263 (1108)
Q Consensus 205 ~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~ 263 (1108)
.|++|+++||+++|+++|+++ |++++++.+++|+.++++|.++++++++++++++++.+
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 478898889999999999999 99999998999999999999999999999999998765
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.4e-07 Score=103.29 Aligned_cols=142 Identities=25% Similarity=0.287 Sum_probs=100.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC---CCCcc-------------------------------
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDI------------------------------- 749 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~---~~~~~------------------------------- 749 (1108)
.+.++++|+++++.|+++.++||.....+..+.+++|+... .++..
T Consensus 22 ~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~ 101 (264)
T COG0561 22 SPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQGI 101 (264)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccCc
Confidence 88999999999999999999999999999999999999853 00000
Q ss_pred --ccchh---------------------------hhhhc--------C--H---HHHHH----Hhc-ccceecccCH---
Q 043360 750 --ALEGE---------------------------QFREL--------N--S---TERMA----KLD-SMTLMGSCLA--- 779 (1108)
Q Consensus 750 --vi~G~---------------------------~l~~l--------~--~---~~~~~----~~~-~~~V~ar~sP--- 779 (1108)
..... ..... . . ++..+ .+. ....+.+..+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~l 181 (264)
T COG0561 102 ALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISL 181 (264)
T ss_pred eEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceE
Confidence 00000 00000 0 0 11111 111 1123333333
Q ss_pred ------hhHHHHHHHHHhC-CC---EEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHh
Q 043360 780 ------DDKLLLVQSVKEK-GH---VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKL 847 (1108)
Q Consensus 780 ------~~K~~iV~~lq~~-g~---~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~ 847 (1108)
.+|..-++.+.++ |- .|+++|| +.||.+||+.|+.||||| ++.+.+|+.||++.. +-..+.+++++
T Consensus 182 ei~~~g~~K~~al~~l~~~lgi~~~~v~afGD-~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 182 DITPKGVSKGYALQRLAKLLGIKLEEVIAFGD-STNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEecCCCchHHHHHHHHHHhCCCHHHeEEeCC-ccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 3698888888774 44 4999999 999999999999999999 889999999997755 77777777654
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.5e-07 Score=105.31 Aligned_cols=64 Identities=20% Similarity=0.254 Sum_probs=52.5
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
.|..-++.+.+. | +.|+++|| |.||.+||+.|++|+||| ++.+.+|++||+|.. +=..+.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD-~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGD-QENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECC-chhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 466666666544 2 56999999 999999999999999999 899999999999987 5566666654
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.6e-07 Score=101.38 Aligned_cols=131 Identities=21% Similarity=0.286 Sum_probs=91.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC---CCCccccchhh-----------hhh-----------
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALEGEQ-----------FRE----------- 758 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~---~~~~~vi~G~~-----------l~~----------- 758 (1108)
-+++.++|++|++.|+++.++||.....+..+++++++..+ .++..+.+..+ +..
T Consensus 20 ~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (215)
T TIGR01487 20 SERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPRDR 99 (215)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhhhh
Confidence 67889999999999999999999999999999999998643 11111111000 000
Q ss_pred c----------------CHHHHHHHhccc--ce-----ecccC--HhhHHHHHHHHHhC-C---CEEEEEeCCCCCCHHH
Q 043360 759 L----------------NSTERMAKLDSM--TL-----MGSCL--ADDKLLLVQSVKEK-G---HVVAFFGGSSTRDTPA 809 (1108)
Q Consensus 759 l----------------~~~~~~~~~~~~--~V-----~ar~s--P~~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~a 809 (1108)
+ ..+++.+.+.+. .+ +..++ ..+|...++.+.+. | ..++++|| +.||.+|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGD-s~ND~~m 178 (215)
T TIGR01487 100 LSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGD-SENDIDL 178 (215)
T ss_pred cccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECC-CHHHHHH
Confidence 0 001122222211 11 11222 34788888887664 3 35999999 9999999
Q ss_pred HhhCCccEecCCCccHHHHhccchhhc
Q 043360 810 LKEADVGITEENKCTEMARECSDIVIS 836 (1108)
Q Consensus 810 Lk~AdVGIamg~~gte~ak~aADivl~ 836 (1108)
++.|++|+||+ ++.+.+|+.||++..
T Consensus 179 l~~ag~~vam~-na~~~~k~~A~~v~~ 204 (215)
T TIGR01487 179 FRVVGFKVAVA-NADDQLKEIADYVTS 204 (215)
T ss_pred HHhCCCeEEcC-CccHHHHHhCCEEcC
Confidence 99999999999 899999999999986
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.7e-07 Score=106.95 Aligned_cols=125 Identities=18% Similarity=0.200 Sum_probs=93.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCc-cccchhhhhhcCHHHHHHHhcccceecc-cCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESND-IALEGEQFRELNSTERMAKLDSMTLMGS-CLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~-~vi~G~~l~~l~~~~~~~~~~~~~V~ar-~sP~~ 781 (1108)
.|++.+.++.|+++|+++.++||.....+..+.+++|+..--.+. .+.+|.--. .+... +..+.
T Consensus 183 ~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg--------------~v~g~iv~~k~ 248 (322)
T PRK11133 183 MPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG--------------NVLGDIVDAQY 248 (322)
T ss_pred ChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe--------------EecCccCCccc
Confidence 899999999999999999999999988899999999985410000 011111000 01110 23467
Q ss_pred HHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHH
Q 043360 782 KLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPIL 845 (1108)
Q Consensus 782 K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li 845 (1108)
|.+.++.+.++ | +.+.++|| |.||.+|++.|++|||| ++.+..++.||.++. ++..+..++
T Consensus 249 K~~~L~~la~~lgi~~~qtIaVGD-g~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 249 KADTLTRLAQEYEIPLAQTVAIGD-GANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred HHHHHHHHHHHcCCChhhEEEEEC-CHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 88888888655 3 57999999 99999999999999999 688999999999997 666665554
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.8e-07 Score=99.33 Aligned_cols=141 Identities=18% Similarity=0.215 Sum_probs=96.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC---CCCccccc---hhh-----hhh--------------
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALE---GEQ-----FRE-------------- 758 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~---~~~~~vi~---G~~-----l~~-------------- 758 (1108)
.+.+.++|+++++.|+++.+.||.....+..+++++|+... .++..+.+ ++. ++.
T Consensus 22 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (230)
T PRK01158 22 SLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFPE 101 (230)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhccc
Confidence 67889999999999999999999999999999999998643 11222211 110 000
Q ss_pred ----------------------cCHHHHHHHhccc----ce-----ecccCHh--hHHHHHHHHHhC----CCEEEEEeC
Q 043360 759 ----------------------LNSTERMAKLDSM----TL-----MGSCLAD--DKLLLVQSVKEK----GHVVAFFGG 801 (1108)
Q Consensus 759 ----------------------l~~~~~~~~~~~~----~V-----~ar~sP~--~K~~iV~~lq~~----g~~Va~iGD 801 (1108)
...+++.+.+.+. .+ +....|. .|..-++.+.++ ...++++||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD 181 (230)
T PRK01158 102 ASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGD 181 (230)
T ss_pred cceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECC
Confidence 0001122222111 11 1123333 377777777654 246999999
Q ss_pred CCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 802 SSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 802 ~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
|.||.+|++.|++|+||| ++.+.+|++||++.. +=.++.+++.
T Consensus 182 -~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 182 -SENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred -chhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 999999999999999999 899999999999886 5555666553
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.6e-07 Score=98.83 Aligned_cols=125 Identities=22% Similarity=0.265 Sum_probs=89.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecc-cCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS-CLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar-~sP~~K 782 (1108)
+|++++.++.|++.|+++.++||.....+..+.+.+|+..--......++..+. ..+.++ ..+..|
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~k 153 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDASYK 153 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCccc
Confidence 899999999999999999999999999999999999986420000000000000 001111 123346
Q ss_pred HHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHH
Q 043360 783 LLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPI 844 (1108)
Q Consensus 783 ~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~l 844 (1108)
..+++.+.++ | +.+.++|| +.||.+|++.|+++++++ +.+..+++||++|. +|..+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~iGD-s~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 154 GKTLLILLRKEGISPENTVAVGD-GANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HHHHHHHHHHcCCCHHHEEEEEC-CHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 7777766544 2 35889999 999999999999999985 77888899999998 76666543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.1e-07 Score=100.50 Aligned_cols=139 Identities=14% Similarity=0.167 Sum_probs=96.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC---CCCccc------------------------------
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIA------------------------------ 750 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~---~~~~~v------------------------------ 750 (1108)
-+++.++|++++++|+++.+.||.....+..+..++++..+ .++..+
T Consensus 17 ~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~~~~ 96 (254)
T PF08282_consen 17 SPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKEHNI 96 (254)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhhccc
Confidence 68899999999999999999999999999999999998732 000000
Q ss_pred ------------cch---hhhhh----------------------------cCH-------HHHHHHhcccceec-----
Q 043360 751 ------------LEG---EQFRE----------------------------LNS-------TERMAKLDSMTLMG----- 775 (1108)
Q Consensus 751 ------------i~G---~~l~~----------------------------l~~-------~~~~~~~~~~~V~a----- 775 (1108)
.+. ..... ... +++.+.++....+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 176 (254)
T PF08282_consen 97 SFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSSPY 176 (254)
T ss_dssp EEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEETT
T ss_pred ccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEeccc
Confidence 000 00000 000 12223332211222
Q ss_pred --ccCH--hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHH
Q 043360 776 --SCLA--DDKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPI 844 (1108)
Q Consensus 776 --r~sP--~~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~l 844 (1108)
.++| ..|..-++.+.+. .+.++++|| +.||.+||+.|+.|+||+ ++++..|..||++.. +=.++.++
T Consensus 177 ~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD-~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 177 FLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGD-SENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp EEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEES-SGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred ceEEeeCCCCHHHHHHHHhhhcccccceeEEeec-ccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHHh
Confidence 2333 4798888888764 367999999 999999999999999999 899999999999988 22555554
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.7e-07 Score=95.44 Aligned_cols=97 Identities=15% Similarity=0.202 Sum_probs=78.3
Q ss_pred HHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceeccc--CHhhHHHHH
Q 043360 709 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC--LADDKLLLV 786 (1108)
Q Consensus 709 ~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~--sP~~K~~iV 786 (1108)
.+|+.|+++|+++.++|+.....+..+.+.+|+.. .|... .|+--..++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-----------------------------~f~~~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-----------------------------FHEGIKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-----------------------------EEecCCCCHHHHHHHH
Confidence 68999999999999999999999999999999975 22222 233333333
Q ss_pred HHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc
Q 043360 787 QSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 836 (1108)
Q Consensus 787 ~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~ 836 (1108)
+.+.-....++++|| +.||.+|++.|++++||+ ++.+..+..||++..
T Consensus 92 ~~l~~~~~ev~~iGD-~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 92 EEMNISDAEVCYVGD-DLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTT 139 (169)
T ss_pred HHcCcCHHHEEEECC-CHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcC
Confidence 333222357999999 999999999999999999 899999999999876
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=4.3e-07 Score=101.79 Aligned_cols=64 Identities=17% Similarity=0.150 Sum_probs=51.9
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccch--hhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI--VIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADi--vl~--~f~~I~~li~ 846 (1108)
.|..-++.+.+. | ..|+++|| |.||.+||+.|+.||||| ++.+.+|++||+ +.. +-.++.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD-~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGD-AMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecC-CHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 477777777655 3 57999999 999999999999999999 899999999996 444 5556666553
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.9e-07 Score=97.50 Aligned_cols=135 Identities=19% Similarity=0.214 Sum_probs=92.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC---CCCccccchh-------------hhh----------
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALEGE-------------QFR---------- 757 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~---~~~~~vi~G~-------------~l~---------- 757 (1108)
.+.+.++|++++++|+++.+.||.....+..+++++|+... .++..+.+.. ...
T Consensus 17 ~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (225)
T TIGR01482 17 NESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTFPF 96 (225)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcccch
Confidence 67788999999999999999999999999999999996432 1111111100 000
Q ss_pred -hc-----------------CHHHHHHHhcccc----e-----ecccCH--hhHHHHHHHHHhC-C---CEEEEEeCCCC
Q 043360 758 -EL-----------------NSTERMAKLDSMT----L-----MGSCLA--DDKLLLVQSVKEK-G---HVVAFFGGSST 804 (1108)
Q Consensus 758 -~l-----------------~~~~~~~~~~~~~----V-----~ar~sP--~~K~~iV~~lq~~-g---~~Va~iGD~G~ 804 (1108)
.. ..+...++..+.. + +....| ..|..-++.+.++ | ..|+++|| +.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD-~~ 175 (225)
T TIGR01482 97 SRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD-SE 175 (225)
T ss_pred hhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC-CH
Confidence 00 0011111121111 1 112223 3788888877654 3 57999999 99
Q ss_pred CCHHHHhhCCccEecCCCccHHHHhccchhhc--cccc
Q 043360 805 RDTPALKEADVGITEENKCTEMARECSDIVIS--AVGS 840 (1108)
Q Consensus 805 ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~ 840 (1108)
||.+|++.|++|+||| ++.+..|+.||+|.. +-..
T Consensus 176 NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G 212 (225)
T TIGR01482 176 NDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEG 212 (225)
T ss_pred hhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCc
Confidence 9999999999999999 899999999999876 4455
|
catalyze the same reaction as SPP. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.8e-07 Score=95.65 Aligned_cols=112 Identities=24% Similarity=0.368 Sum_probs=85.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCcc-----ccchhhhhhcCHHHHHHHhcccceecc-c
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI-----ALEGEQFRELNSTERMAKLDSMTLMGS-C 777 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~-----vi~G~~l~~l~~~~~~~~~~~~~V~ar-~ 777 (1108)
+|++.+.++.++++|.+|+++||-...-+..+|+++|+...-...+ +++|. +..+ +
T Consensus 79 ~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g~~~ 140 (212)
T COG0560 79 TPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVGPIC 140 (212)
T ss_pred CccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eeeeec
Confidence 8999999999999999999999999999999999999986411111 34443 4443 3
Q ss_pred CHhhHHHHHHHHHhC-CC---EEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc
Q 043360 778 LADDKLLLVQSVKEK-GH---VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 836 (1108)
Q Consensus 778 sP~~K~~iV~~lq~~-g~---~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~ 836 (1108)
..+.|.+.++.+.+. |. .+.++|| |.||.|||+.|+.+++.+ +....+..|+..+.
T Consensus 141 ~~~~K~~~l~~~~~~~g~~~~~~~a~gD-s~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 141 DGEGKAKALRELAAELGIPLEETVAYGD-SANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred CcchHHHHHHHHHHHcCCCHHHeEEEcC-chhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 447898888666554 54 5899999 999999999999999986 44444455555444
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.7e-07 Score=99.35 Aligned_cols=64 Identities=22% Similarity=0.228 Sum_probs=49.9
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccc--hhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD--IVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aAD--ivl~--~f~~I~~li~ 846 (1108)
.|..-++.+.+. | +.|+++|| |.||.+||+.|+.|+||| ++.+.+|+.|| .|.. +=.++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD-~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGD-GMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcC-CcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666666544 2 56999999 999999999999999999 89999999988 5554 4445655553
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.42 E-value=6.8e-07 Score=91.41 Aligned_cols=106 Identities=15% Similarity=0.252 Sum_probs=83.9
Q ss_pred eeeEEEecccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceec
Q 043360 696 HLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 775 (1108)
Q Consensus 696 ~llG~i~ir~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~a 775 (1108)
..++...++++. +|+.|++.|+++.++||+....+..+.++.|+.. .+.
T Consensus 24 ~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~-----------------------------~~~ 72 (154)
T TIGR01670 24 EEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH-----------------------------LYQ 72 (154)
T ss_pred cEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE-----------------------------EEe
Confidence 344444446665 9999999999999999999999999999999864 122
Q ss_pred ccCHhhHHHHHHHHHh-C---CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc
Q 043360 776 SCLADDKLLLVQSVKE-K---GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 836 (1108)
Q Consensus 776 r~sP~~K~~iV~~lq~-~---g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~ 836 (1108)
.. ..|.+.++.+.+ . .+.+.|+|| +.||.+|++.|+++++|. ++.+..+..||+++.
T Consensus 73 ~~--~~k~~~~~~~~~~~~~~~~~~~~vGD-s~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~ 133 (154)
T TIGR01670 73 GQ--SNKLIAFSDILEKLALAPENVAYIGD-DLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTR 133 (154)
T ss_pred cc--cchHHHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEec
Confidence 11 245555555433 2 357999999 999999999999999998 788888999999987
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=1e-06 Score=92.82 Aligned_cols=108 Identities=18% Similarity=0.280 Sum_probs=84.9
Q ss_pred HHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHH
Q 043360 709 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQS 788 (1108)
Q Consensus 709 ~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~ 788 (1108)
.+|+.|++.|+++.++||.....+..+++++|+.. +|. ..++|...++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-----------------------------~f~--g~~~k~~~l~~ 103 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-----------------------------LYQ--GQSNKLIAFSD 103 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-----------------------------eec--CCCcHHHHHHH
Confidence 68999999999999999999999999999999864 222 12345555555
Q ss_pred HH-hCC---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc------ccccHHHHHHhhh
Q 043360 789 VK-EKG---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS------AVGSLLPILKLGR 849 (1108)
Q Consensus 789 lq-~~g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~------~f~~I~~li~~GR 849 (1108)
+. +.| ..|+|+|| +.||.+|++.|+++++++ ++.+..+..||+++. .+..+.+.+...|
T Consensus 104 ~~~~~gl~~~ev~~VGD-s~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 104 LLEKLAIAPEQVAYIGD-DLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHhCCCHHHEEEECC-CHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 43 333 47999999 999999999999999998 678888889999985 4556666654433
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.8e-06 Score=90.82 Aligned_cols=124 Identities=20% Similarity=0.220 Sum_probs=91.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceec--ccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG--SCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~a--r~sP~~ 781 (1108)
.|++++.++.|+++ +++.++|+.....+..+.+++|+...-......+++. .+.. -..|+.
T Consensus 70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~i~~~~~~~p~~ 132 (205)
T PRK13582 70 LPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG----------------MITGYDLRQPDG 132 (205)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC----------------eEECccccccch
Confidence 79999999999999 9999999999999999999999863100111111100 0111 124778
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccch-hhcccccHHHHHH
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI-VISAVGSLLPILK 846 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADi-vl~~f~~I~~li~ 846 (1108)
|...++.++..+..+.|+|| |.||.+|.+.|++|+..+ .+.+.....++. ++.++..|...+.
T Consensus 133 k~~~l~~~~~~~~~~v~iGD-s~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~~~~el~~~l~ 196 (205)
T PRK13582 133 KRQAVKALKSLGYRVIAAGD-SYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVHTYDELLAAID 196 (205)
T ss_pred HHHHHHHHHHhCCeEEEEeC-CHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccCCHHHHHHHHH
Confidence 88999999888899999999 999999999999999877 344444455666 5557777766653
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.2e-06 Score=104.53 Aligned_cols=51 Identities=14% Similarity=0.227 Sum_probs=44.9
Q ss_pred CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 794 HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 794 ~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
+.|+++|| |.||.+||+.|+.||||| +|.+.+|++||+|.. +=.++.++|+
T Consensus 524 eeviAFGD-s~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 524 DEIMAIGD-GENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHEEEEec-chhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 36999999 999999999999999999 899999999999886 5566666654
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.3e-06 Score=94.38 Aligned_cols=64 Identities=22% Similarity=0.313 Sum_probs=51.7
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
.|...++.+.++ | +.|+++|| +.||.+|++.|++|+||| ++.+..|+.||++.. +=.++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD-~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGD-NFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCC-ChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466666655443 3 46999999 999999999999999999 788889999999887 6666776664
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00024 Score=85.44 Aligned_cols=97 Identities=20% Similarity=0.241 Sum_probs=73.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
+|++.+.+++++++|+++.++|+-....+..+++..|+.+. ++.+++ ..++.|+.|.
T Consensus 74 ~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~------------------~~~~kg~~K~ 130 (479)
T PRK08238 74 NEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDG------------------TTNLKGAAKA 130 (479)
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCC------------------ccccCCchHH
Confidence 89999999999999999999999999999999999998431 222211 1145667776
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEM 826 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ 826 (1108)
+.++..... +.+.++|| ..||.++++.|+-.++++ .+...
T Consensus 131 ~~l~~~l~~-~~~~yvGD-S~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 131 AALVEAFGE-RGFDYAGN-SAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred HHHHHHhCc-cCeeEecC-CHHHHHHHHhCCCeEEEC-CCHHH
Confidence 654432222 22578899 999999999999999998 34444
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.2e-05 Score=90.23 Aligned_cols=39 Identities=23% Similarity=0.218 Sum_probs=36.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 742 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~ 742 (1108)
-+.++++|++|+++|+++++.||.....+..+++++|+.
T Consensus 26 ~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 26 WQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 456889999999999999999999999999999999984
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=6e-06 Score=81.67 Aligned_cols=116 Identities=18% Similarity=0.286 Sum_probs=96.0
Q ss_pred HHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHH
Q 043360 709 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQS 788 (1108)
Q Consensus 709 ~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~ 788 (1108)
-.|+.+.++||+|-++||.+...++.=|+++||.. ++-. -++|....+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-----------------------------~~qG--~~dK~~a~~~ 90 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-----------------------------LYQG--ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-----------------------------eeec--hHhHHHHHHH
Confidence 47999999999999999999999999999999975 3322 2578777776
Q ss_pred HHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc------ccccHHHHHHhhhhhhhhhhh
Q 043360 789 VKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS------AVGSLLPILKLGRCAYCNIQK 857 (1108)
Q Consensus 789 lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~------~f~~I~~li~~GR~~~~~i~k 857 (1108)
|.++ -+.|+++|| -.||.|++++..+++|.- ++.+-.++.||+|+. -++.+.++|..++..++-..+
T Consensus 91 L~~~~~l~~e~~ayiGD-D~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~~ 167 (170)
T COG1778 91 LLKKLNLDPEEVAYVGD-DLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEALG 167 (170)
T ss_pred HHHHhCCCHHHhhhhcC-ccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHHh
Confidence 6554 357999999 999999999999999988 788888899999987 677788888777776665443
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.6e-05 Score=88.25 Aligned_cols=39 Identities=23% Similarity=0.263 Sum_probs=36.0
Q ss_pred cchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCC
Q 043360 705 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 743 (1108)
Q Consensus 705 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~ 743 (1108)
+.+.++|+.|+++|+++.++||.....+..+.+++|+..
T Consensus 19 ~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR01486 19 GPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED 57 (256)
T ss_pred hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 458999999999999999999999999999999999854
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.11 E-value=7.7e-06 Score=90.77 Aligned_cols=54 Identities=26% Similarity=0.266 Sum_probs=47.6
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc
Q 043360 781 DKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 836 (1108)
Q Consensus 781 ~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~ 836 (1108)
.|..-++.+.+. .+.++++|| +.||.+|++.|+.|+||+ ++.+..|+.||++..
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD-~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~ 245 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGD-GMNDIEMLEAAGYGVAMG-NADEELKALADYVTD 245 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCC-cHHhHHHHHhCCceeEec-CchHHHHHhCCEEec
Confidence 588877777665 257999999 999999999999999999 889999999999886
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.7e-06 Score=86.51 Aligned_cols=115 Identities=19% Similarity=0.133 Sum_probs=80.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
+|++.+.++.|++.|+++.++|+-....+..+++.+|+..- ....+...+-.... +. .+....|..|.
T Consensus 82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~g~~~--------p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 82 RDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV--YSNELVFDEKGFIQ--------PD--GIVRVTFDNKG 149 (201)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE--EEEEEEEcCCCeEe--------cc--eeeEEccccHH
Confidence 89999999999999999999999999999999999997531 00111100000000 00 12224466787
Q ss_pred HHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccc
Q 043360 784 LLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD 832 (1108)
Q Consensus 784 ~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aAD 832 (1108)
++++.+.++ .+.+.++|| +.||.+|++.|+++++++ .+....+.|+|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGD-s~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGD-SKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcC-CHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 777776544 245999999 999999999999999997 34444555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.01 E-value=9.1e-06 Score=82.89 Aligned_cols=104 Identities=19% Similarity=0.202 Sum_probs=76.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCcccc----chhhhhhcCHHHHHHHhcccceecccCH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIAL----EGEQFRELNSTERMAKLDSMTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi----~G~~l~~l~~~~~~~~~~~~~V~ar~sP 779 (1108)
-|++++.++.||+.|.+|.++||--..-+..+|.++||...+.....+ +|+-..- +...-. +..
T Consensus 90 T~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gf----------d~~~pt--sds 157 (227)
T KOG1615|consen 90 TPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGF----------DTNEPT--SDS 157 (227)
T ss_pred CCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccc----------ccCCcc--ccC
Confidence 799999999999999999999999999999999999998631111111 1111000 000011 122
Q ss_pred hhHHHHHHHHHhC--CCEEEEEeCCCCCCHHHHhhCCccEecC
Q 043360 780 DDKLLLVQSVKEK--GHVVAFFGGSSTRDTPALKEADVGITEE 820 (1108)
Q Consensus 780 ~~K~~iV~~lq~~--g~~Va~iGD~G~ND~~aLk~AdVGIamg 820 (1108)
.-|+++++.+++. -+.++|+|| |+||.+|...||-=|+.|
T Consensus 158 ggKa~~i~~lrk~~~~~~~~mvGD-GatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 158 GGKAEVIALLRKNYNYKTIVMVGD-GATDLEAMPPADAFIGFG 199 (227)
T ss_pred CccHHHHHHHHhCCChheeEEecC-CccccccCCchhhhhccC
Confidence 4799999999986 468999999 999999999988777655
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=97.99 E-value=7.9e-06 Score=86.08 Aligned_cols=92 Identities=17% Similarity=0.255 Sum_probs=68.5
Q ss_pred cchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHh-h--
Q 043360 705 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAD-D-- 781 (1108)
Q Consensus 705 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~-~-- 781 (1108)
+++++.|+.++++|++++++||+....+..+++.+|+... .++ +.++..- .+.....|.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~----~v~-~~~~~~~---------~~~~~~~~~~~~~~~~ 157 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD----NVI-GNELFDN---------GGGIFTGRITGSNCGG 157 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG----GEE-EEEEECT---------TCCEEEEEEEEEEESH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce----EEE-EEeeeec---------ccceeeeeECCCCCCc
Confidence 4555999999999999999999999999999999999752 111 1111000 012245555555 4
Q ss_pred HHHHHHHH------HhCCCEEEEEeCCCCCCHHHHh
Q 043360 782 KLLLVQSV------KEKGHVVAFFGGSSTRDTPALK 811 (1108)
Q Consensus 782 K~~iV~~l------q~~g~~Va~iGD~G~ND~~aLk 811 (1108)
|...++.+ +.....+.++|| |.||.||||
T Consensus 158 K~~~l~~~~~~~~~~~~~~~~~~iGD-s~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDIDPDRVIAIGD-SINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTHTCCEEEEEES-SGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEEEC-CHHHHHHhC
Confidence 99999999 334789999999 999999997
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.90 E-value=3.9e-05 Score=82.89 Aligned_cols=133 Identities=14% Similarity=0.062 Sum_probs=86.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCC-CCccccchhhhhhcCHHHHHHHhccccee--cccCHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-SNDIALEGEQFRELNSTERMAKLDSMTLM--GSCLAD 780 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~-~~~~vi~G~~l~~l~~~~~~~~~~~~~V~--ar~sP~ 780 (1108)
+|++.+.++.|++.|+++.++||.....+..+.+.++....- .+....+|..+.... +.-..+ ......
T Consensus 72 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~--------p~~~~~~~~~~cg~ 143 (214)
T TIGR03333 72 REGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW--------PHPCDGTCQNQCGC 143 (214)
T ss_pred cccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC--------CCCCccccccCCCC
Confidence 999999999999999999999999999999999887543210 012233333322110 000010 111135
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHH--hccchhhcccccHHHHHH
Q 043360 781 DKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAR--ECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak--~aADivl~~f~~I~~li~ 846 (1108)
.|..+++.++...+.+.|+|| |.||..|++.||+++|-+ .-.+-.+ .-+.+.+.+|..+.+.+.
T Consensus 144 ~K~~~l~~~~~~~~~~i~iGD-g~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 144 CKPSLIRKLSEPNDYHIVIGD-SVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred CHHHHHHHHhhcCCcEEEEeC-CHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 799999999877788999999 999999999999988754 1111111 112222237777666653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.90 E-value=5.2e-05 Score=85.07 Aligned_cols=41 Identities=27% Similarity=0.367 Sum_probs=37.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 744 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~ 744 (1108)
.+++.++|+.|++.|+++.++||.....+..+.+++|+..+
T Consensus 23 ~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~ 63 (273)
T PRK00192 23 YEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDP 63 (273)
T ss_pred cHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Confidence 56789999999999999999999999999999999998643
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.2e-05 Score=82.26 Aligned_cols=124 Identities=25% Similarity=0.254 Sum_probs=83.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCC--CccccchhhhhhcCHHHHHHHhcccceecc-----
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGS----- 776 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~--~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar----- 776 (1108)
+|++++.++.|++.|+++.++||.....+..+.+.+|+..... ..+..+.+ -.+.+.
T Consensus 86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~----------------g~~~g~~~~~~ 149 (224)
T PLN02954 86 SPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS----------------GEYAGFDENEP 149 (224)
T ss_pred CccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC----------------CcEECccCCCc
Confidence 8999999999999999999999999999999999999963100 00000000 001111
Q ss_pred -cCHhhHHHHHHHHHhC-C-CEEEEEeCCCCCCHHHHhh--CCccEecCCCc-cHHHHhccchhhcccccHHHH
Q 043360 777 -CLADDKLLLVQSVKEK-G-HVVAFFGGSSTRDTPALKE--ADVGITEENKC-TEMARECSDIVISAVGSLLPI 844 (1108)
Q Consensus 777 -~sP~~K~~iV~~lq~~-g-~~Va~iGD~G~ND~~aLk~--AdVGIamg~~g-te~ak~aADivl~~f~~I~~l 844 (1108)
.....|.+.++.+.++ | +.+.|+|| +.||..|.+. ++++++.|... .+.....+|+++.++..|.+.
T Consensus 150 ~~~~~~K~~~i~~~~~~~~~~~~i~iGD-s~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 222 (224)
T PLN02954 150 TSRSGGKAEAVQHIKKKHGYKTMVMIGD-GATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEV 222 (224)
T ss_pred ccCCccHHHHHHHHHHHcCCCceEEEeC-CHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHh
Confidence 1123477777776654 3 57899999 9999999877 56667655221 233345688888777666543
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.67 E-value=7.4e-05 Score=77.70 Aligned_cols=91 Identities=24% Similarity=0.231 Sum_probs=69.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCcc------ccchhhhhhcCHHHHHHHhccccee--c
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI------ALEGEQFRELNSTERMAKLDSMTLM--G 775 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~------vi~G~~l~~l~~~~~~~~~~~~~V~--a 775 (1108)
+|++.+.++.+++.|+++.++||.....+..+++.+|+..--.... .++|+ +. .
T Consensus 75 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~------------------~~~~~ 136 (177)
T TIGR01488 75 RPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGP------------------IEGQV 136 (177)
T ss_pred CcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCc------------------cCCcc
Confidence 8999999999999999999999999999999999999863100011 11111 11 1
Q ss_pred ccCHhhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhC
Q 043360 776 SCLADDKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEA 813 (1108)
Q Consensus 776 r~sP~~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~A 813 (1108)
...+..|...++.+++. ...+.++|| |.||.+|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGD-s~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGD-SVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeC-CHHHHHHHhcC
Confidence 24567899999887654 346899999 99999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00015 Score=77.29 Aligned_cols=103 Identities=17% Similarity=0.219 Sum_probs=75.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCcccc--chhhhhhcCHHHHHHHhccccee-cccCHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIAL--EGEQFRELNSTERMAKLDSMTLM-GSCLAD 780 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi--~G~~l~~l~~~~~~~~~~~~~V~-ar~sP~ 780 (1108)
++++.+.++.+++.|+++.++||-....+..+++.+|+..--...+.. +|. + .. ++. -.+.++
T Consensus 89 ~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~-~---~g----------~~~~~~~~g~ 154 (202)
T TIGR01490 89 YPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGI-Y---TG----------NIDGNNCKGE 154 (202)
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCE-E---eC----------CccCCCCCCh
Confidence 899999999999999999999999999999999999986420011111 110 0 00 011 123467
Q ss_pred hHHHHHHHHHh-CC---CEEEEEeCCCCCCHHHHhhCCccEecCC
Q 043360 781 DKLLLVQSVKE-KG---HVVAFFGGSSTRDTPALKEADVGITEEN 821 (1108)
Q Consensus 781 ~K~~iV~~lq~-~g---~~Va~iGD~G~ND~~aLk~AdVGIamg~ 821 (1108)
.|...++.+.+ .+ +.+.++|| +.||.||++.|+.++++..
T Consensus 155 ~K~~~l~~~~~~~~~~~~~~~~~gD-s~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 155 GKVHALAELLAEEQIDLKDSYAYGD-SISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred HHHHHHHHHHHHcCCCHHHcEeeeC-CcccHHHHHhCCCcEEeCC
Confidence 88887776654 34 36889999 9999999999999998763
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00011 Score=79.82 Aligned_cols=124 Identities=24% Similarity=0.284 Sum_probs=91.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
-|+++++++.|+++|++..++|++....+..+.+..|+... -..++.+... -...-.|....
T Consensus 91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~--F~~i~g~~~~----------------~~~KP~P~~l~ 152 (220)
T COG0546 91 FPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADY--FDVIVGGDDV----------------PPPKPDPEPLL 152 (220)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccc--cceEEcCCCC----------------CCCCcCHHHHH
Confidence 69999999999999999999999999999999999999863 1112111211 01112344444
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCC---ccEecCCC-ccHHHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEAD---VGITEENK-CTEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~Ad---VGIamg~~-gte~ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-..+.++|||| ..+|..|=|.|+ ||+..|.. +.+.....+|+++.++..|...+.
T Consensus 153 ~~~~~~~~~~~~~l~VGD-s~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 153 LLLEKLGLDPEEALMVGD-SLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred HHHHHhCCChhheEEECC-CHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 444444433347999999 999999999998 77888753 456676779999988887776653
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00014 Score=78.94 Aligned_cols=123 Identities=23% Similarity=0.287 Sum_probs=85.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH--hh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA--DD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP--~~ 781 (1108)
.||+.+.++.|++.|+++.++||.....+..+.+..|+... ...++.++. +.+..| +-
T Consensus 95 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~------------------~~~~kp~~~~ 154 (226)
T PRK13222 95 YPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADY--FSVVIGGDS------------------LPNKKPDPAP 154 (226)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccC--ccEEEcCCC------------------CCCCCcChHH
Confidence 89999999999999999999999999999999999998642 122222221 112222 22
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-cEec--CCC-ccHHHHhccchhhcccccHHHHHHh
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADV-GITE--ENK-CTEMARECSDIVISAVGSLLPILKL 847 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV-GIam--g~~-gte~ak~aADivl~~f~~I~~li~~ 847 (1108)
-..+.+.++.....+.++|| +.||+.|.+.|++ +|.+ |.. ..+.....+|+++.++..+...+.+
T Consensus 155 ~~~~~~~~~~~~~~~i~igD-~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 155 LLLACEKLGLDPEEMLFVGD-SRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHcCCChhheEEECC-CHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence 23333334333567999999 9999999999998 4443 321 2334456788888888888877654
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.58 E-value=9.3e-05 Score=77.65 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=76.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecc-cCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS-CLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar-~sP~~K 782 (1108)
++++.+.++.|++.|+++.++|+.+...+..+.+..|+... -..++.++..-. .+..+.-...++.++.. .....|
T Consensus 74 ~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 74 DPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDV--FIEIYSNPASFD-NDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhh--eeEEeccCceEC-CCCcEEEecCCCCccCcCCCCCCH
Confidence 89999999999999999999999999999999999998542 111222111000 00000000011112221 122369
Q ss_pred HHHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCccEe
Q 043360 783 LLLVQSVKEK-GHVVAFFGGSSTRDTPALKEADVGIT 818 (1108)
Q Consensus 783 ~~iV~~lq~~-g~~Va~iGD~G~ND~~aLk~AdVGIa 818 (1108)
.++++.+++. .+.+.++|| |.||..|.++||+-.|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD-~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGD-GVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHhhcCceEEEECC-CcchhchHhcCCcccc
Confidence 9999999887 889999999 9999999999988665
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00037 Score=75.97 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=36.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 743 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~ 743 (1108)
-+++.++|++|+++|++++++||.....+..+.+++|+..
T Consensus 17 ~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 17 PGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred chHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 3568999999999999999999999999999999999854
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00021 Score=77.46 Aligned_cols=104 Identities=19% Similarity=0.166 Sum_probs=73.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCC--CccccchhhhhhcCHHHHHHHhcccce--e-cccC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTL--M-GSCL 778 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~--~~~vi~G~~l~~l~~~~~~~~~~~~~V--~-ar~s 778 (1108)
+||+.+.++.|++.|+++.++||-....+..+.+.+ +..... .....+|+.+..-. +.-.. + .++
T Consensus 76 ~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~k--------p~p~~~~~~~~~- 145 (219)
T PRK09552 76 REGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITW--------PHPCDEHCQNHC- 145 (219)
T ss_pred CcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEec--------cCCccccccccC-
Confidence 999999999999999999999999999999999988 643100 01112332211000 00000 0 001
Q ss_pred HhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe
Q 043360 779 ADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT 818 (1108)
Q Consensus 779 P~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa 818 (1108)
...|..+++.++.....+.|+|| |.||..|.+.||+.++
T Consensus 146 ~~~K~~~l~~~~~~~~~~i~iGD-s~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 146 GCCKPSLIRKLSDTNDFHIVIGD-SITDLEAAKQADKVFA 184 (219)
T ss_pred CCchHHHHHHhccCCCCEEEEeC-CHHHHHHHHHCCccee
Confidence 13488888888777778999999 9999999999999776
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00066 Score=74.45 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=50.7
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccc----hhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD----IVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aAD----ivl~--~f~~I~~li~ 846 (1108)
.|...++.+.++ | ..|+++|| +.||.+|++.|+.||+|+ ++.+..|+.|| ++.. +=..+.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD-~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGD-SGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcC-CccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 688888877654 3 35889999 999999999999999999 79999999999 5544 3345666553
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0007 Score=73.33 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=35.0
Q ss_pred chHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCC
Q 043360 706 EIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 742 (1108)
Q Consensus 706 ~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~ 742 (1108)
.+.++|+.++++|+++.++||.....+..+.+++|+.
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3789999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00025 Score=69.33 Aligned_cols=111 Identities=18% Similarity=0.171 Sum_probs=73.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
++++++.+++|++.|++++++||.....+....+.+|+... ...++.......-..............+.+-.|+.+.
T Consensus 26 ~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (139)
T cd01427 26 YPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLL 103 (139)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccccccccccccccCCCCHHHHH
Confidence 89999999999999999999999999999999999998432 1111111100000000000001111134456666666
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhh-CCccE
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKE-ADVGI 817 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~-AdVGI 817 (1108)
.+.+.+......+.++|| +.||+.|++. ..-+|
T Consensus 104 ~~~~~~~~~~~~~~~igD-~~~d~~~~~~~g~~~i 137 (139)
T cd01427 104 AALKLLGVDPEEVLMVGD-SLNDIEMAKAAGGLGV 137 (139)
T ss_pred HHHHHcCCChhhEEEeCC-CHHHHHHHHHcCCcee
Confidence 676666555678999999 9999999998 44444
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00052 Score=75.91 Aligned_cols=126 Identities=14% Similarity=0.107 Sum_probs=85.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC-----CCCccccchh-------------------hhh--
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP-----ESNDIALEGE-------------------QFR-- 757 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~-----~~~~~vi~G~-------------------~l~-- 757 (1108)
.|...++++++++.|+.++.+||.....++.+.+++++..+ +++..+..+. .+.
T Consensus 23 ~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (249)
T TIGR01485 23 LLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIVVAI 102 (249)
T ss_pred HHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHHHHH
Confidence 78899999999999999999999999999999999998654 1222222110 000
Q ss_pred -----hc-----------------CHHH-------HHHHhcc----cce-ec-----ccCH--hhHHHHHHHHHhC----
Q 043360 758 -----EL-----------------NSTE-------RMAKLDS----MTL-MG-----SCLA--DDKLLLVQSVKEK---- 792 (1108)
Q Consensus 758 -----~l-----------------~~~~-------~~~~~~~----~~V-~a-----r~sP--~~K~~iV~~lq~~---- 792 (1108)
.+ ..+. +.+.+.+ +.+ .+ ...| ..|..-++.+.+.
T Consensus 103 ~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~ 182 (249)
T TIGR01485 103 TDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLAME 182 (249)
T ss_pred HhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcCCC
Confidence 00 0011 1222211 111 11 2333 4788888888664
Q ss_pred CCEEEEEeCCCCCCHHHHhh-CCccEecCCCccHHHHhcc
Q 043360 793 GHVVAFFGGSSTRDTPALKE-ADVGITEENKCTEMARECS 831 (1108)
Q Consensus 793 g~~Va~iGD~G~ND~~aLk~-AdVGIamg~~gte~ak~aA 831 (1108)
...|+++|| +.||.+|++. ++.|++|+ ++.+..|+.+
T Consensus 183 ~~~~i~~GD-~~ND~~ml~~~~~~~va~~-na~~~~k~~~ 220 (249)
T TIGR01485 183 PSQTLVCGD-SGNDIELFEIGSVRGVIVS-NAQEELLQWY 220 (249)
T ss_pred ccCEEEEEC-ChhHHHHHHccCCcEEEEC-CCHHHHHHHH
Confidence 367999999 9999999998 77999999 7888777543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00046 Score=73.82 Aligned_cols=123 Identities=13% Similarity=0.104 Sum_probs=82.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|+++|+++.++|+.....+..+-+..|+... -..++.+++. ...+-.|+-=.
T Consensus 77 ~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~----------------~~~KP~~~~~~ 138 (205)
T TIGR01454 77 FPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPL--FDHVIGSDEV----------------PRPKPAPDIVR 138 (205)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhh--eeeEEecCcC----------------CCCCCChHHHH
Confidence 89999999999999999999999999999999999998642 1112211110 01122222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe---cCC-CccHHHHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT---EEN-KCTEMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa---mg~-~gte~ak~aADivl~~f~~I~~li 845 (1108)
.+++.++-..+.++|+|| +.+|..+-++|++... -|. ...+..+..+|+++.++..|..++
T Consensus 139 ~~~~~~~~~~~~~l~igD-~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVPPEDAVMVGD-AVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred HHHHHcCCChhheEEEcC-CHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 333333323467999999 9999999999998643 231 223345677899887777766554
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0017 Score=77.14 Aligned_cols=122 Identities=16% Similarity=0.141 Sum_probs=80.3
Q ss_pred HHHH-HHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCC-----CCccccchhh-----------------------hhh
Q 043360 708 KSTV-EALRNAGVRIILVSEDELLAVTEVACELGNFRPE-----SNDIALEGEQ-----------------------FRE 758 (1108)
Q Consensus 708 ~~aI-~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~-----~~~~vi~G~~-----------------------l~~ 758 (1108)
.+++ +++++.|+..+..||..+..+..+.++.++..++ ++..+..+.. +..
T Consensus 34 ~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~~ 113 (413)
T PLN02382 34 FNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETSK 113 (413)
T ss_pred HHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHhc
Confidence 3444 8899999999999999999999999999987761 1111111000 000
Q ss_pred c--------------------CH-------HHHHHHhc----ccce------ecccCHh--hHHHHHHHHHhC----C--
Q 043360 759 L--------------------NS-------TERMAKLD----SMTL------MGSCLAD--DKLLLVQSVKEK----G-- 793 (1108)
Q Consensus 759 l--------------------~~-------~~~~~~~~----~~~V------~ar~sP~--~K~~iV~~lq~~----g-- 793 (1108)
+ .+ +++.+.+. ++.+ +-.+.|. .|..-++.|.++ |
T Consensus 114 ~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~ 193 (413)
T PLN02382 114 FPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKA 193 (413)
T ss_pred CCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCC
Confidence 0 00 11222221 1111 1234443 588888888665 2
Q ss_pred -CEEEEEeCCCCCCHHHHhhCC-ccEecCCCccHHHHhcc
Q 043360 794 -HVVAFFGGSSTRDTPALKEAD-VGITEENKCTEMARECS 831 (1108)
Q Consensus 794 -~~Va~iGD~G~ND~~aLk~Ad-VGIamg~~gte~ak~aA 831 (1108)
..|+++|| +.||.+||+.|+ .||+|| ++.+..|+.+
T Consensus 194 ~~~~iafGD-s~NDleMl~~ag~~gvam~-NA~~elk~~a 231 (413)
T PLN02382 194 PVNTLVCGD-SGNDAELFSVPDVYGVMVS-NAQEELLQWY 231 (413)
T ss_pred hhcEEEEeC-CHHHHHHHhcCCCCEEEEc-CCcHHHHHHH
Confidence 47899999 999999999999 699999 8888887654
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0027 Score=78.00 Aligned_cols=38 Identities=13% Similarity=0.152 Sum_probs=35.2
Q ss_pred cchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCC
Q 043360 705 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 742 (1108)
Q Consensus 705 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~ 742 (1108)
+.+.++|+.|+++|+.+.+.||.....+..+++++|+.
T Consensus 436 ~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 436 STALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 46789999999999999999999999999999999974
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0026 Score=70.70 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=37.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 744 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~ 744 (1108)
-+.+.++|++|+++||.|++.||........+.+++|+..+
T Consensus 20 ~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 20 YGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 45689999999999999999999999999999999998643
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0016 Score=70.13 Aligned_cols=121 Identities=17% Similarity=0.147 Sum_probs=81.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccC--Hhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL--ADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~s--P~~ 781 (1108)
.|++.+.++.|+++|+++.++|+.....+..+-+..|+... -..++.+++ +.+.. |+-
T Consensus 84 ~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~--f~~i~~~~~------------------~~~~Kp~p~~ 143 (214)
T PRK13288 84 YETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF--FDVVITLDD------------------VEHAKPDPEP 143 (214)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc--eeEEEecCc------------------CCCCCCCcHH
Confidence 79999999999999999999999999999999999998752 122222221 11222 222
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc---EecCCCcc-HHHHhccchhhcccccHHHHH
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG---ITEENKCT-EMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG---Iamg~~gt-e~ak~aADivl~~f~~I~~li 845 (1108)
-.++.+.+.-....++|+|| ..+|..|-++|++- +.-|.... +.....+|+++.++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGD-s~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGD-NHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECC-CHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 22333333322457899999 99999999999984 33442122 233456888877777776654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0019 Score=72.54 Aligned_cols=118 Identities=22% Similarity=0.234 Sum_probs=79.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH-
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK- 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K- 782 (1108)
.|++.++++.|++.|+++.++|+-....+..+..+.|+... ...++.+ ...+..|
T Consensus 103 ~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~--f~~i~~~----------------------d~~~~~Kp 158 (272)
T PRK13223 103 YPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRY--FRWIIGG----------------------DTLPQKKP 158 (272)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhh--CeEEEec----------------------CCCCCCCC
Confidence 89999999999999999999999999999988888887542 1112222 1112222
Q ss_pred -HHHHH-HHHhC---CCEEEEEeCCCCCCHHHHhhCCcc-Ee--cCCC-ccHHHHhccchhhcccccHHHHHH
Q 043360 783 -LLLVQ-SVKEK---GHVVAFFGGSSTRDTPALKEADVG-IT--EENK-CTEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 783 -~~iV~-~lq~~---g~~Va~iGD~G~ND~~aLk~AdVG-Ia--mg~~-gte~ak~aADivl~~f~~I~~li~ 846 (1108)
..+++ .+++. .+.+.|+|| +.||..|.+.|++. ++ .|-. ..+.....+|+++.++..|..++.
T Consensus 159 ~p~~~~~~~~~~g~~~~~~l~IGD-~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~ 230 (272)
T PRK13223 159 DPAALLFVMKMAGVPPSQSLFVGD-SRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCA 230 (272)
T ss_pred CcHHHHHHHHHhCCChhHEEEECC-CHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHh
Confidence 12222 22222 457999999 99999999999973 33 3321 222344578988888777776544
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0026 Score=71.18 Aligned_cols=133 Identities=10% Similarity=0.091 Sum_probs=81.2
Q ss_pred ccchHHHHHHHHH-cCCEEEEecCCcHHHHHHHHHHcCCCCC-CCCcccc-----------chhhh--------------
Q 043360 704 REEIKSTVEALRN-AGVRIILVSEDELLAVTEVACELGNFRP-ESNDIAL-----------EGEQF-------------- 756 (1108)
Q Consensus 704 r~~v~~aI~~l~~-aGI~v~mlTGD~~~tA~~IA~~~GI~~~-~~~~~vi-----------~G~~l-------------- 756 (1108)
-+++.++|+.|++ .|+++.++||.....+..+.+.+++.-. ..+..+. +.+..
T Consensus 38 ~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~~~ 117 (266)
T PRK10187 38 PDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALAQL 117 (266)
T ss_pred CHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhccC
Confidence 5788999999998 7999999999999999988877664210 0011111 00000
Q ss_pred ----------------hhcC--HHHHHHH-------hcccc-----eecccCH--hhHHHHHHHHHhC----CCEEEEEe
Q 043360 757 ----------------RELN--STERMAK-------LDSMT-----LMGSCLA--DDKLLLVQSVKEK----GHVVAFFG 800 (1108)
Q Consensus 757 ----------------~~l~--~~~~~~~-------~~~~~-----V~ar~sP--~~K~~iV~~lq~~----g~~Va~iG 800 (1108)
+.+. ++.+.++ .+... -+..+.| .+|..-|+.+.+. ...|.++|
T Consensus 118 pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~G 197 (266)
T PRK10187 118 PGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFVG 197 (266)
T ss_pred CCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEEc
Confidence 0000 0111111 11111 1112233 3788877776554 35789999
Q ss_pred CCCCCCHHHHhhC----CccEecCCCccHHHHhccchhhcccccHH
Q 043360 801 GSSTRDTPALKEA----DVGITEENKCTEMARECSDIVISAVGSLL 842 (1108)
Q Consensus 801 D~G~ND~~aLk~A----dVGIamg~~gte~ak~aADivl~~f~~I~ 842 (1108)
| +.||.+|++.+ +.||+|| ++. ..|++.+.+...+.
T Consensus 198 D-~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~~~~v~ 237 (266)
T PRK10187 198 D-DLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAGVPDVW 237 (266)
T ss_pred C-CccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCCHHHHH
Confidence 9 99999999999 9999999 443 44567776444433
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0021 Score=69.01 Aligned_cols=118 Identities=17% Similarity=0.204 Sum_probs=79.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+-....+..+.+..|+... -..++.+++ ..+..|. ..
T Consensus 87 ~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~------------------~~~~Kp~-p~ 145 (213)
T TIGR01449 87 FPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKY--FSVLIGGDS------------------LAQRKPH-PD 145 (213)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhh--CcEEEecCC------------------CCCCCCC-hH
Confidence 89999999999999999999999999999999999998642 112222211 1122231 11
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCccEe-c--CCCc-cHHHHhccchhhcccccHHH
Q 043360 784 LLVQSVKEK---GHVVAFFGGSSTRDTPALKEADVGIT-E--ENKC-TEMARECSDIVISAVGSLLP 843 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~AdVGIa-m--g~~g-te~ak~aADivl~~f~~I~~ 843 (1108)
-+-+.+++. ...++++|| ..||+.|.++|++-.. + |... .+.....+|+++.++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igD-s~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGD-SRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCC-CHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 222333333 356999999 9999999999998754 3 3111 12333568888776666544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0037 Score=67.82 Aligned_cols=118 Identities=13% Similarity=0.112 Sum_probs=79.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.++++.|++.|+++.++|+........+.+..||... -..++.+.+.. ..+-.|+
T Consensus 94 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~Kp~~~--- 152 (222)
T PRK10826 94 LPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDY--FDALASAEKLP----------------YSKPHPE--- 152 (222)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhc--ccEEEEcccCC----------------CCCCCHH---
Confidence 79999999999999999999999999999999999998653 22222222110 1111222
Q ss_pred HHHHHHHhCC---CEEEEEeCCCCCCHHHHhhCCccEec---CCCccHHHHhccchhhcccccHHH
Q 043360 784 LLVQSVKEKG---HVVAFFGGSSTRDTPALKEADVGITE---ENKCTEMARECSDIVISAVGSLLP 843 (1108)
Q Consensus 784 ~iV~~lq~~g---~~Va~iGD~G~ND~~aLk~AdVGIam---g~~gte~ak~aADivl~~f~~I~~ 843 (1108)
-+-+.+++.| +.++|+|| ..||+.+-+.|++.... +..+.+.-...+|+++.+|..+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~igD-s~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 153 VYLNCAAKLGVDPLTCVALED-SFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred HHHHHHHHcCCCHHHeEEEcC-ChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence 2233333333 46899999 99999999999987542 211222222357887777776654
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0053 Score=67.02 Aligned_cols=125 Identities=12% Similarity=0.086 Sum_probs=84.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.+.++.|++.|+++.++|+.+...+..+-+..|+... -..++.+.+.. ...-.|+-=.
T Consensus 97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~----------------~~KP~p~~~~ 158 (229)
T PRK13226 97 FDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR--CAVLIGGDTLA----------------ERKPHPLPLL 158 (229)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc--ccEEEecCcCC----------------CCCCCHHHHH
Confidence 89999999999999999999999999988888888988652 12222222110 1112232223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe---cCCC-c-cHHHHhccchhhcccccHHHHHHh
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT---EENK-C-TEMARECSDIVISAVGSLLPILKL 847 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa---mg~~-g-te~ak~aADivl~~f~~I~~li~~ 847 (1108)
.+++.+.-..+.+.|+|| +.||..|-+.|++... -|-. . .+.....+|+++.++..|.+.+-|
T Consensus 159 ~~~~~l~~~p~~~l~IGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~~~ 226 (229)
T PRK13226 159 VAAERIGVAPTDCVYVGD-DERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPATW 226 (229)
T ss_pred HHHHHhCCChhhEEEeCC-CHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHhcC
Confidence 334444333567999999 9999999999998743 2311 1 112335689988888888776655
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.016 Score=64.12 Aligned_cols=55 Identities=13% Similarity=0.263 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCC---CCCCHHHHhhC-CccEecCCCccHHHHhccchhh
Q 043360 780 DDKLLLVQSVKEKGHVVAFFGGS---STRDTPALKEA-DVGITEENKCTEMARECSDIVI 835 (1108)
Q Consensus 780 ~~K~~iV~~lq~~g~~Va~iGD~---G~ND~~aLk~A-dVGIamg~~gte~ak~aADivl 835 (1108)
-+|..-++.|.++.+.|+++||. |-||.+||+.| -.|++++ +..+..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 36777777777766789999993 47999999976 6777777 78888887776653
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.0069 Score=64.67 Aligned_cols=37 Identities=32% Similarity=0.507 Sum_probs=34.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG 740 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~G 740 (1108)
.+++.+++++|++.|+++.++||.....+..+.++++
T Consensus 19 ~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 19 SPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 6788999999999999999999999999999998754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.014 Score=65.54 Aligned_cols=117 Identities=15% Similarity=0.199 Sum_probs=80.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+-+.+|+... -..++.+++ .+..+.
T Consensus 144 ~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~--F~~vi~~~~----------------------~~~k~~ 199 (273)
T PRK13225 144 FPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSL--FSVVQAGTP----------------------ILSKRR 199 (273)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhh--eEEEEecCC----------------------CCCCHH
Confidence 79999999999999999999999999999999999998652 122222221 001112
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCccEe---cCCCcc-HHHHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEK---GHVVAFFGGSSTRDTPALKEADVGIT---EENKCT-EMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~AdVGIa---mg~~gt-e~ak~aADivl~~f~~I~~li 845 (1108)
-+.+.+++. ...++|+|| +.+|..|-+.|++-.. -|.... +.....+|+++.++..|..++
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGD-s~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGD-ETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECC-CHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHH
Confidence 222333333 356999999 9999999999998643 231111 123346899888887777654
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.013 Score=63.37 Aligned_cols=118 Identities=18% Similarity=0.222 Sum_probs=79.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCC--CCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF--RPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~--~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~ 781 (1108)
.||+.+.++.|++.|+++.++|+-....+..+.+..|+. .. -..++.+.+.. +..|..
T Consensus 89 ~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~--f~~i~~~~~~~------------------~~KP~p 148 (220)
T TIGR03351 89 LPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDD--VDAVVCPSDVA------------------AGRPAP 148 (220)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhcc--CCEEEcCCcCC------------------CCCCCH
Confidence 899999999999999999999999999999999999986 32 22333332211 122311
Q ss_pred HHHHHHHHHhCC----CEEEEEeCCCCCCHHHHhhCCccEe--cCCCcc----HHHHhccchhhcccccHHHH
Q 043360 782 KLLLVQSVKEKG----HVVAFFGGSSTRDTPALKEADVGIT--EENKCT----EMARECSDIVISAVGSLLPI 844 (1108)
Q Consensus 782 K~~iV~~lq~~g----~~Va~iGD~G~ND~~aLk~AdVGIa--mg~~gt----e~ak~aADivl~~f~~I~~l 844 (1108)
. .+-+.+++.| ..++|+|| +.+|..+-+.|++..+ +. .|. +.....+|.++.+++.+..+
T Consensus 149 ~-~~~~a~~~~~~~~~~~~~~igD-~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 149 D-LILRAMELTGVQDVQSVAVAGD-TPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred H-HHHHHHHHcCCCChhHeEEeCC-CHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 1 1223333332 57999999 9999999999999862 22 222 12234577777766665543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.018 Score=62.13 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=73.7
Q ss_pred ccchHHHHH-HHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccce-ecccCHhh
Q 043360 704 REEIKSTVE-ALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTL-MGSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~-~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V-~ar~sP~~ 781 (1108)
+|++.+.|+ .+++.|++++++|+-....+..+|+..|+... ..++ |.+++.-.. -.+ =..|.-++
T Consensus 96 ~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~~g---------g~~~g~~c~g~~ 162 (210)
T TIGR01545 96 FPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERGNG---------GWVLPLRCLGHE 162 (210)
T ss_pred CccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEeCC---------ceEcCccCCChH
Confidence 899999996 78889999999999999999999999666431 1122 333321110 001 12356688
Q ss_pred HHHHHHHHHh-CCCEEEEEeCCCCCCHHHHhhCCccEecCC
Q 043360 782 KLLLVQSVKE-KGHVVAFFGGSSTRDTPALKEADVGITEEN 821 (1108)
Q Consensus 782 K~~iV~~lq~-~g~~Va~iGD~G~ND~~aLk~AdVGIamg~ 821 (1108)
|.+-++..-. .....-+-|| ..||.|||+.||-.++++.
T Consensus 163 Kv~rl~~~~~~~~~~~~aYsD-S~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 163 KVAQLEQKIGSPLKLYSGYSD-SKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred HHHHHHHHhCCChhheEEecC-CcccHHHHHhCCCcEEECc
Confidence 9886665432 2334567899 9999999999999999863
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.026 Score=72.25 Aligned_cols=165 Identities=13% Similarity=0.162 Sum_probs=101.6
Q ss_pred HHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEe-----c-ccchHHHHHHHHH-cCCEEEEecCCcHHHHHHH
Q 043360 663 FQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAG-----L-REEIKSTVEALRN-AGVRIILVSEDELLAVTEV 735 (1108)
Q Consensus 663 ~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~-----i-r~~v~~aI~~l~~-aGI~v~mlTGD~~~tA~~I 735 (1108)
.+...+.|...-.|.+++-| |.|++.... . -+++.++++.|.+ .|+.|+++||.........
T Consensus 480 ~~~~~~~y~~~~~rLi~~D~-----------DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~ 548 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLDY-----------DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERW 548 (726)
T ss_pred HHHHHHHHHhccceEEEEec-----------CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHH
Confidence 45556667666678888877 557665421 1 5788999999999 6999999999999988887
Q ss_pred HHHcCC--CCCCCCcccc-chhhh--------------hh---------------------------cCH-------HHH
Q 043360 736 ACELGN--FRPESNDIAL-EGEQF--------------RE---------------------------LNS-------TER 764 (1108)
Q Consensus 736 A~~~GI--~~~~~~~~vi-~G~~l--------------~~---------------------------l~~-------~~~ 764 (1108)
....++ +.. ++..+. .|.+. .. .++ +++
T Consensus 549 ~~~~~l~liae-nG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 549 FGDLPIHLVAE-HGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred hCCCCeEEEEe-CCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 655443 111 011100 00000 00 000 111
Q ss_pred HHHhcc------ccee-----cccCH--hhHHHHHHHHHhC--CCEEEEEeCCCCCCHHHHhhC---CccEecCCCccHH
Q 043360 765 MAKLDS------MTLM-----GSCLA--DDKLLLVQSVKEK--GHVVAFFGGSSTRDTPALKEA---DVGITEENKCTEM 826 (1108)
Q Consensus 765 ~~~~~~------~~V~-----ar~sP--~~K~~iV~~lq~~--g~~Va~iGD~G~ND~~aLk~A---dVGIamg~~gte~ 826 (1108)
.+.+.. +.+. ..+.| -+|...++.+.+. -..|+++|| +.||.+|++.+ ..+|+|| ++
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD-~~nDe~Mf~~~~~~~~~v~vG-~~--- 702 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGD-DTTDEDMFRALPETAITVKVG-PG--- 702 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECC-CCChHHHHHhcccCceEEEEC-CC---
Confidence 111111 1111 12223 4788888888765 358999999 99999999986 5888898 43
Q ss_pred HHhccchhhcccccHHHHH
Q 043360 827 ARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 827 ak~aADivl~~f~~I~~li 845 (1108)
+.+|++.+.+-..+.+.+
T Consensus 703 -~s~A~~~l~~~~eV~~~L 720 (726)
T PRK14501 703 -ESRARYRLPSQREVRELL 720 (726)
T ss_pred -CCcceEeCCCHHHHHHHH
Confidence 466788887444444443
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.021 Score=63.26 Aligned_cols=92 Identities=14% Similarity=0.087 Sum_probs=66.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.+.++.|++.|+++.++|+.....+..+-++.|+...- ...++.+++. .+..|. ..
T Consensus 101 ~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~------------------~~~KP~-p~ 160 (253)
T TIGR01422 101 IPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDV------------------PAGRPA-PW 160 (253)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccC------------------CCCCCC-HH
Confidence 799999999999999999999999999999999999886520 1233333321 112232 22
Q ss_pred HHHHHHHhCC----CEEEEEeCCCCCCHHHHhhCCcc
Q 043360 784 LLVQSVKEKG----HVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 784 ~iV~~lq~~g----~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
.+.+.+++.| +.++|||| ..+|+.|-+.|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGD-s~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGD-TVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECC-cHHHHHHHHHCCCe
Confidence 3334444443 45999999 99999999999975
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.023 Score=63.48 Aligned_cols=121 Identities=12% Similarity=0.094 Sum_probs=80.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
-||+.+.++.|++.|+++.++||.....+..+-+..|+.... ...++.+++. .+..| +..
T Consensus 103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~------------------~~~KP-~p~ 162 (267)
T PRK13478 103 IPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDV------------------PAGRP-YPW 162 (267)
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcC------------------CCCCC-ChH
Confidence 799999999999999999999999999888888887765420 1222222211 11123 122
Q ss_pred HHHHHHHhCC----CEEEEEeCCCCCCHHHHhhCCc---cEecCCCc------------------------cHHHHhccc
Q 043360 784 LLVQSVKEKG----HVVAFFGGSSTRDTPALKEADV---GITEENKC------------------------TEMARECSD 832 (1108)
Q Consensus 784 ~iV~~lq~~g----~~Va~iGD~G~ND~~aLk~AdV---GIamg~~g------------------------te~ak~aAD 832 (1108)
-+.+.+++.| ..++|||| ..+|+.|-+.|++ |+.-|... .+.....+|
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~ 241 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDD-TVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAH 241 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcC-cHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCC
Confidence 3344444443 46999999 9999999999997 45444210 122344588
Q ss_pred hhhcccccHHHHH
Q 043360 833 IVISAVGSLLPIL 845 (1108)
Q Consensus 833 ivl~~f~~I~~li 845 (1108)
+++.++..|...+
T Consensus 242 ~vi~~~~~l~~~l 254 (267)
T PRK13478 242 YVIDTIADLPAVI 254 (267)
T ss_pred eehhhHHHHHHHH
Confidence 8888777776654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.019 Score=64.06 Aligned_cols=122 Identities=15% Similarity=0.124 Sum_probs=79.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.+.++.|++.|+++.++|+.....+..+-+.+|+... -..++.+.+.. ...-.|+-=.
T Consensus 111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~----------------~~KP~Pe~~~ 172 (260)
T PLN03243 111 RPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY----------------RGKPDPEMFM 172 (260)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC----------------CCCCCHHHHH
Confidence 79999999999999999999999999999999999998652 23344443321 1111222112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccE-ecCCCccHHHHhccchhhcccccHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGI-TEENKCTEMARECSDIVISAVGSLLPI 844 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGI-amg~~gte~ak~aADivl~~f~~I~~l 844 (1108)
..++.+.-....++|+|| ..+|+.|-+.|++-. ++...+.......+|+++.+++.+...
T Consensus 173 ~a~~~l~~~p~~~l~IgD-s~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 173 YAAERLGFIPERCIVFGN-SNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred HHHHHhCCChHHeEEEcC-CHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHH
Confidence 222333222456999999 999999999999853 222122222223467776666655433
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.011 Score=65.30 Aligned_cols=118 Identities=19% Similarity=0.211 Sum_probs=70.0
Q ss_pred hHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCC-----CCccccchhhhhhc-----------C----------
Q 043360 707 IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-----SNDIALEGEQFREL-----------N---------- 760 (1108)
Q Consensus 707 v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~-----~~~~vi~G~~l~~l-----------~---------- 760 (1108)
..+.++...+.++...++||.+.+.+..+.++.++..++ .+..+..|+.+... .
T Consensus 24 l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~ 103 (247)
T PF05116_consen 24 LEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAE 103 (247)
T ss_dssp HHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHC
T ss_pred HHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHH
Confidence 334444455789999999999999999999999987651 11122221111000 0
Q ss_pred -----------------------------HHHHHHHhcccceec----------ccCH--hhHHHHHHHHHhC-C---CE
Q 043360 761 -----------------------------STERMAKLDSMTLMG----------SCLA--DDKLLLVQSVKEK-G---HV 795 (1108)
Q Consensus 761 -----------------------------~~~~~~~~~~~~V~a----------r~sP--~~K~~iV~~lq~~-g---~~ 795 (1108)
-+++.+.+....+-+ .+-| ..|...|+.|+++ + +.
T Consensus 104 ~~~l~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~ 183 (247)
T PF05116_consen 104 LPGLRPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQ 183 (247)
T ss_dssp HCCEEEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGG
T ss_pred hhCcccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHH
Confidence 022333332222111 1223 4699999998876 2 45
Q ss_pred EEEEeCCCCCCHHHHhhCCccEecCCCccHH
Q 043360 796 VAFFGGSSTRDTPALKEADVGITEENKCTEM 826 (1108)
Q Consensus 796 Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ 826 (1108)
|.++|| ..||.+||..++-||.+| ++.+.
T Consensus 184 vl~aGD-SgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 184 VLVAGD-SGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp EEEEES-SGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred EEEEeC-CCCcHHHHcCcCCEEEEc-CCCHH
Confidence 777899 999999999999999999 55554
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.026 Score=62.45 Aligned_cols=118 Identities=12% Similarity=0.049 Sum_probs=78.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+-....+..+-+..|+... -..++.+++... .+-.|+--.
T Consensus 110 ~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~iv~~~~~~~----------------~KP~p~~~~ 171 (248)
T PLN02770 110 LNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF--FQAVIIGSECEH----------------AKPHPDPYL 171 (248)
T ss_pred CccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh--CcEEEecCcCCC----------------CCCChHHHH
Confidence 78999999999999999999999999999999999998753 233444433211 112222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe-c--CCCccHHHHhccchhhccccc
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT-E--ENKCTEMARECSDIVISAVGS 840 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa-m--g~~gte~ak~aADivl~~f~~ 840 (1108)
...+.+.-....+.|+|| ..+|..|-++|++-.. + |....+.....+|+++.++..
T Consensus 172 ~a~~~~~~~~~~~l~vgD-s~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 172 KALEVLKVSKDHTFVFED-SVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred HHHHHhCCChhHEEEEcC-CHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 233333323456999999 9999999999987533 2 211112223467888776665
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.037 Score=59.84 Aligned_cols=114 Identities=9% Similarity=0.047 Sum_probs=74.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.+.++.|+++|+++.++|+.....+..+-+..|+.. ...++.+++.. +..|. -.
T Consensus 85 ~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~------------------~~KP~-p~ 142 (218)
T PRK11587 85 LPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK------------------RGKPE-PD 142 (218)
T ss_pred CcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc------------------CCCCC-cH
Confidence 8999999999999999999999988777777667777732 22333333221 12222 11
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCcc-EecCCCcc-HHHHhccchhhcccccH
Q 043360 784 LLVQSVKEK---GHVVAFFGGSSTRDTPALKEADVG-ITEENKCT-EMARECSDIVISAVGSL 841 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~AdVG-Iamg~~gt-e~ak~aADivl~~f~~I 841 (1108)
-+...+++. .+.++|+|| ..+|+.+-+.|++- |++. .+. +.....+|+++.+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igD-s~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVED-APAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred HHHHHHHHcCCCcccEEEEec-chhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecchhhe
Confidence 222233333 467999999 99999999999985 4444 222 22234577776655543
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.049 Score=58.68 Aligned_cols=103 Identities=12% Similarity=0.085 Sum_probs=73.4
Q ss_pred ccchHHHH-HHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhccccee-cccCHhh
Q 043360 704 REEIKSTV-EALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM-GSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI-~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~-ar~sP~~ 781 (1108)
+|++.+.| +.+++.|+++.++|+-....+..+++.+|+... ..++ |.+++.. ..-++. ..|.-+.
T Consensus 97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~---~~~i-~t~l~~~---------~tg~~~g~~c~g~~ 163 (211)
T PRK11590 97 FPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR---VNLI-ASQMQRR---------YGGWVLTLRCLGHE 163 (211)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc---CceE-EEEEEEE---------EccEECCccCCChH
Confidence 79999999 578889999999999999999999999996321 1122 3332210 000111 2366688
Q ss_pred HHHHHHHHH-hCCCEEEEEeCCCCCCHHHHhhCCccEecC
Q 043360 782 KLLLVQSVK-EKGHVVAFFGGSSTRDTPALKEADVGITEE 820 (1108)
Q Consensus 782 K~~iV~~lq-~~g~~Va~iGD~G~ND~~aLk~AdVGIamg 820 (1108)
|..-++..- ......-+-|| ..||.|||+.|+-+++++
T Consensus 164 K~~~l~~~~~~~~~~~~aY~D-s~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 164 KVAQLERKIGTPLRLYSGYSD-SKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHHhCCCcceEEEecC-CcccHHHHHhCCCCEEEC
Confidence 988776542 22344557899 999999999999999986
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.046 Score=57.56 Aligned_cols=138 Identities=21% Similarity=0.268 Sum_probs=87.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCC-------cccc-chhh---h------hhcCHHHHHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESN-------DIAL-EGEQ---F------RELNSTERMA 766 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~-------~~vi-~G~~---l------~~l~~~~~~~ 766 (1108)
-||+.++++.+++. ....++|---.+-+.++|..+|+...+-. ++.+ +++. + ..++.+++.+
T Consensus 85 vPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelfe 163 (315)
T COG4030 85 VPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELFE 163 (315)
T ss_pred CCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHHH
Confidence 68999999988865 55667777788899999999999653100 0000 1110 0 0112233333
Q ss_pred HhcccceecccCHhh---------------HHHHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCC-c-cEecCCCccHH
Q 043360 767 KLDSMTLMGSCLADD---------------KLLLVQSVKEK---GHVVAFFGGSSTRDTPALKEAD-V-GITEENKCTEM 826 (1108)
Q Consensus 767 ~~~~~~V~ar~sP~~---------------K~~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~Ad-V-GIamg~~gte~ 826 (1108)
.+++ +|.|..|.. |+++++.+-+. ....+++|| .+.|+.||+.+. - |+|+.-+|.+-
T Consensus 164 ~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGD-SItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 164 KLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGD-SITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecC-cccchHHHHHhhccCceEEEecCCcc
Confidence 3322 566666654 55555554443 345688999 999999999875 2 36666689999
Q ss_pred HHhccchhhc--ccccHHHHH
Q 043360 827 ARECSDIVIS--AVGSLLPIL 845 (1108)
Q Consensus 827 ak~aADivl~--~f~~I~~li 845 (1108)
|-..||+.+. +..++..+|
T Consensus 241 al~eAdVAvisp~~~a~~pvi 261 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVI 261 (315)
T ss_pred cccccceEEeccchhhhhHHH
Confidence 8889999887 444444443
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.026 Score=59.97 Aligned_cols=90 Identities=12% Similarity=0.018 Sum_probs=64.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.++++++++.|++.|+++.++||-....+..+-+.+|+... -..++.+++ +..+-.|+--.
T Consensus 108 ~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--f~~~~~~~~-----------------~~~KP~p~~~~ 168 (197)
T TIGR01548 108 LLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL--FPVQIWMED-----------------CPPKPNPEPLI 168 (197)
T ss_pred ccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh--CCEEEeecC-----------------CCCCcCHHHHH
Confidence 66779999999999999999999999999999999998652 122222221 12233444434
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhC
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEA 813 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~A 813 (1108)
.+.+.+.-....++|+|| +.+|+.|-+.|
T Consensus 169 ~~~~~~~~~~~~~i~vGD-~~~Di~aA~~a 197 (197)
T TIGR01548 169 LAAKALGVEACHAAMVGD-TVDDIITGRKA 197 (197)
T ss_pred HHHHHhCcCcccEEEEeC-CHHHHHHHHhC
Confidence 444444444567999999 99999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.032 Score=61.09 Aligned_cols=87 Identities=20% Similarity=0.233 Sum_probs=63.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCC----cHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH
Q 043360 704 REEIKSTVEALRNAGVRIILVSED----ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD----~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP 779 (1108)
.+++++.++.+++.|+++.++|+- ...++..+.+.+|+... ...++.|+... .-.|
T Consensus 116 ~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f~~i~~~d~~~------------------~~Kp 175 (237)
T TIGR01672 116 KEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--NPVIFAGDKPG------------------QYQY 175 (237)
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--eeEEECCCCCC------------------CCCC
Confidence 566999999999999999999997 77799999999999652 22333332211 0112
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 780 DDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 780 ~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
+|. ..+++.| ++.|+|| ..||..+-+.|++-
T Consensus 176 -~~~---~~l~~~~-i~i~vGD-s~~DI~aAk~AGi~ 206 (237)
T TIGR01672 176 -TKT---QWIQDKN-IRIHYGD-SDNDITAAKEAGAR 206 (237)
T ss_pred -CHH---HHHHhCC-CeEEEeC-CHHHHHHHHHCCCC
Confidence 232 3445555 4789999 99999999999875
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.036 Score=60.76 Aligned_cols=88 Identities=18% Similarity=0.206 Sum_probs=63.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCC----cHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH
Q 043360 704 REEIKSTVEALRNAGVRIILVSED----ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD----~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP 779 (1108)
.+++++.++.+++.|+++.++||. ...|+..+.+..|+........++.|+.. .-
T Consensus 116 ~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~---------------------~K 174 (237)
T PRK11009 116 KEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP---------------------GQ 174 (237)
T ss_pred hHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------CC
Confidence 678999999999999999999995 46799999999999532112222222210 01
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccE
Q 043360 780 DDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGI 817 (1108)
Q Consensus 780 ~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGI 817 (1108)
.+|.. .+++.| .++|+|| ..+|..+-+.|++-.
T Consensus 175 ~~K~~---~l~~~~-i~I~IGD-s~~Di~aA~~AGi~~ 207 (237)
T PRK11009 175 YTKTQ---WLKKKN-IRIFYGD-SDNDITAAREAGARG 207 (237)
T ss_pred CCHHH---HHHhcC-CeEEEcC-CHHHHHHHHHcCCcE
Confidence 34443 444554 4889999 999999999998763
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.062 Score=59.97 Aligned_cols=40 Identities=13% Similarity=0.247 Sum_probs=38.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 743 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~ 743 (1108)
|||+.+.++.|++.|+++.++||-....+..+.++.|+..
T Consensus 123 ~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~ 162 (277)
T TIGR01544 123 KDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYH 162 (277)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999864
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.12 Score=60.41 Aligned_cols=66 Identities=17% Similarity=0.186 Sum_probs=47.4
Q ss_pred ccCHh---hHHHHHHHHHhC-C-----C-EEEEEeCCCCCCHHHHhh-----CCccEecCCCccHHHHhccchhhccccc
Q 043360 776 SCLAD---DKLLLVQSVKEK-G-----H-VVAFFGGSSTRDTPALKE-----ADVGITEENKCTEMARECSDIVISAVGS 840 (1108)
Q Consensus 776 r~sP~---~K~~iV~~lq~~-g-----~-~Va~iGD~G~ND~~aLk~-----AdVGIamg~~gte~ak~aADivl~~f~~ 840 (1108)
.+.|. +|...|+.+.+. | . .++++|| +.||..|++. +++||+|| +|.+. ..|++.+.+-..
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGD-D~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~dp~e 368 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGD-DRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRDPSE 368 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECC-CchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCCHHH
Confidence 45563 899888887655 2 1 2589999 9999999996 68999998 45432 357888776655
Q ss_pred HHHHH
Q 043360 841 LLPIL 845 (1108)
Q Consensus 841 I~~li 845 (1108)
+...+
T Consensus 369 V~~~L 373 (384)
T PLN02580 369 VMEFL 373 (384)
T ss_pred HHHHH
Confidence 55554
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.12 Score=52.98 Aligned_cols=99 Identities=13% Similarity=0.206 Sum_probs=65.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHH---HHHHHc---C--CCCCCCCccccc-hhhhhhcCHHHHHHHhccccee
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVT---EVACEL---G--NFRPESNDIALE-GEQFRELNSTERMAKLDSMTLM 774 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~---~IA~~~---G--I~~~~~~~~vi~-G~~l~~l~~~~~~~~~~~~~V~ 774 (1108)
.+++++++++++++|+++.++||.....+. ....++ | +.. ..+++. |..+..+.. .+.
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~---g~li~~~g~~~~~~~~----------e~i 95 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH---GPVLLSPDRLFAALHR----------EVI 95 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC---ceEEEcCCcchhhhhc----------ccc
Confidence 799999999999999999999999988874 444552 3 332 122222 221111110 123
Q ss_pred cccCHhhHHHHHHHHHh-----CCCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 775 GSCLADDKLLLVQSVKE-----KGHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 775 ar~sP~~K~~iV~~lq~-----~g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
.+-.-+.|.+.++.+++ ....++..|| +.+|+.+-++++|-
T Consensus 96 ~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn-~~~D~~~y~~~gi~ 141 (157)
T smart00775 96 SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGN-RITDVISYSAVGIP 141 (157)
T ss_pred cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCC-CchhHHHHHHcCCC
Confidence 22222348888887777 3578888999 99999999888664
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.11 Score=54.47 Aligned_cols=124 Identities=15% Similarity=0.095 Sum_probs=68.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcH---------------HHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDEL---------------LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 768 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~ 768 (1108)
.||+.++++.|++.|+++.++|.... +....+-+..|+.- .. ++......
T Consensus 31 ~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f---~~-i~~~~~~~----------- 95 (181)
T PRK08942 31 IPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL---DG-IYYCPHHP----------- 95 (181)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc---ce-EEECCCCC-----------
Confidence 89999999999999999999998752 11122233445421 01 11000000
Q ss_pred cccceecccC--HhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe-cCCCccH---HHHhcc--chhhccccc
Q 043360 769 DSMTLMGSCL--ADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT-EENKCTE---MARECS--DIVISAVGS 840 (1108)
Q Consensus 769 ~~~~V~ar~s--P~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa-mg~~gte---~ak~aA--Divl~~f~~ 840 (1108)
...+.+.. |+--..+.+.+.-..+.+.|+|| ..+|+.+-+.|++..- +. .|.. .....+ |+++.++..
T Consensus 96 --~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgD-s~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~l~e 171 (181)
T PRK08942 96 --EDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGD-SLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDSLAD 171 (181)
T ss_pred --CCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeC-CHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecCHHH
Confidence 00011112 22222333333323467999999 9999999999997522 22 2221 122335 777777777
Q ss_pred HHHHHH
Q 043360 841 LLPILK 846 (1108)
Q Consensus 841 I~~li~ 846 (1108)
+.+++.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 776653
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.093 Score=54.75 Aligned_cols=123 Identities=9% Similarity=-0.020 Sum_probs=68.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHH--------HHHHHHHHcCCCCCCCCcccc-chhhhhhcCHHHHHHHhccccee
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELL--------AVTEVACELGNFRPESNDIAL-EGEQFRELNSTERMAKLDSMTLM 774 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~--------tA~~IA~~~GI~~~~~~~~vi-~G~~l~~l~~~~~~~~~~~~~V~ 774 (1108)
.||++++++.|++.|+++.++|+.... .+...-+..|+..- -.... .+++. -.
T Consensus 30 ~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~----------------~~ 91 (173)
T PRK06769 30 FPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI--YLCPHKHGDGC----------------EC 91 (173)
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE--EECcCCCCCCC----------------CC
Confidence 899999999999999999999987531 12222334454320 00000 00000 00
Q ss_pred cccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCc--cH--------HHHhccchhhcccccHHHH
Q 043360 775 GSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKC--TE--------MARECSDIVISAVGSLLPI 844 (1108)
Q Consensus 775 ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~g--te--------~ak~aADivl~~f~~I~~l 844 (1108)
.+-.|+-=..+.+.+.-.-+.+.|+|| ..+|+.+-++|++-...-..| .+ .....+|+++.++..+...
T Consensus 92 ~KP~p~~~~~~~~~l~~~p~~~i~IGD-~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~ 170 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDLTQCAVIGD-RWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNW 170 (173)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEcC-CHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHH
Confidence 111122112233333222356999999 999999999999864421122 21 1123467777777666654
Q ss_pred H
Q 043360 845 L 845 (1108)
Q Consensus 845 i 845 (1108)
+
T Consensus 171 l 171 (173)
T PRK06769 171 I 171 (173)
T ss_pred H
Confidence 3
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.092 Score=55.70 Aligned_cols=92 Identities=15% Similarity=0.216 Sum_probs=63.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH-
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK- 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K- 782 (1108)
.|++.++++.|++.|+++.++|+-+...+..+.+.+|+... -..++.+++. .+..|.-.
T Consensus 94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~------------------~~~KP~~~~ 153 (198)
T TIGR01428 94 HPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP--FDAVLSADAV------------------RAYKPAPQV 153 (198)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh--hheeEehhhc------------------CCCCCCHHH
Confidence 79999999999999999999999998889999999998542 1223322221 11223211
Q ss_pred -HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 783 -LLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 783 -~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
..+.+.+.-.-+.++++|| +.+|+.+-+.|++-
T Consensus 154 ~~~~~~~~~~~p~~~~~vgD-~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 154 YQLALEALGVPPDEVLFVAS-NPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHhCCChhhEEEEeC-CHHHHHHHHHCCCc
Confidence 1222222222356899999 99999999988875
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.05 Score=56.84 Aligned_cols=89 Identities=16% Similarity=0.153 Sum_probs=59.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.++++.|+++|+++.++|+... +..+.+.+|+... -..++++.+. .+..|. ..
T Consensus 89 ~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~--f~~~~~~~~~------------------~~~kp~-p~ 145 (185)
T TIGR01990 89 LPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDY--FDAIVDPAEI------------------KKGKPD-PE 145 (185)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhh--CcEEEehhhc------------------CCCCCC-hH
Confidence 79999999999999999999997432 4567777887642 2233333321 122232 11
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 784 LLVQSVKEK---GHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
-+-+.+++. .+.+.|||| ..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD-~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIED-AQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEec-CHHHHHHHHHcCCE
Confidence 222333333 346899999 99999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.08 Score=64.09 Aligned_cols=120 Identities=17% Similarity=0.061 Sum_probs=81.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.+.++.|++.|+++.++|+-....+..+-+.+|+... -..++.+++.. ..-.|+-
T Consensus 332 ~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~--f~~i~~~d~v~-----------------~~~kP~~-- 390 (459)
T PRK06698 332 YPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQW--VTETFSIEQIN-----------------SLNKSDL-- 390 (459)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhh--cceeEecCCCC-----------------CCCCcHH--
Confidence 79999999999999999999999999999999999998652 22333333221 1112321
Q ss_pred HHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCcc-EecCC-CccHHHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEK-GHVVAFFGGSSTRDTPALKEADVG-ITEEN-KCTEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~-g~~Va~iGD~G~ND~~aLk~AdVG-Iamg~-~gte~ak~aADivl~~f~~I~~li~ 846 (1108)
+...+++. -+.+.|+|| ..+|+.|-+.|++- |++.- .+.+-....+|+++.+++.+.+++.
T Consensus 391 -~~~al~~l~~~~~v~VGD-s~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~ 454 (459)
T PRK06698 391 -VKSILNKYDIKEAAVVGD-RLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILS 454 (459)
T ss_pred -HHHHHHhcCcceEEEEeC-CHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHH
Confidence 11222221 356999999 99999999999974 33321 1222222457888888877777654
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.16 Score=50.22 Aligned_cols=89 Identities=17% Similarity=0.144 Sum_probs=59.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCc--------HHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceec
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDE--------LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 775 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~--------~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~a 775 (1108)
.|++.++++.|+++|+++.++|+.. ...+.++.+.+|+... .....+ . ..
T Consensus 27 ~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~---~~~~~~-~------------------~~ 84 (132)
T TIGR01662 27 YPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID---VLYACP-H------------------CR 84 (132)
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE---EEEECC-C------------------CC
Confidence 7999999999999999999999988 7778888888887531 111111 0 00
Q ss_pred ccCHhhHHHHHHHHH-hCCCEEEEEeCCC-CCCHHHHhhCCc
Q 043360 776 SCLADDKLLLVQSVK-EKGHVVAFFGGSS-TRDTPALKEADV 815 (1108)
Q Consensus 776 r~sP~~K~~iV~~lq-~~g~~Va~iGD~G-~ND~~aLk~AdV 815 (1108)
+-.|+-=..+.+.++ -..+.++|+|| + .+|+.+-+.|++
T Consensus 85 KP~~~~~~~~~~~~~~~~~~~~v~IGD-~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 85 KPKPGMFLEALKRFNEIDPEESVYVGD-QDLTDLQAAKRAGL 125 (132)
T ss_pred CCChHHHHHHHHHcCCCChhheEEEcC-CCcccHHHHHHCCC
Confidence 111111122333331 23467999999 8 799999888875
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.12 Score=60.50 Aligned_cols=117 Identities=16% Similarity=0.131 Sum_probs=79.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHh--h
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAD--D 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~--~ 781 (1108)
.||+.+.++.|+++|+++.++|+-....+..+-+..||... -..++.+++. .+-.|. -
T Consensus 218 ~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y--Fd~Iv~sddv------------------~~~KP~Pei 277 (381)
T PLN02575 218 RTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF--FSVIVAAEDV------------------YRGKPDPEM 277 (381)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH--ceEEEecCcC------------------CCCCCCHHH
Confidence 79999999999999999999999999999999999998652 2223333321 112232 1
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe-cCCCccHHHH-hccchhhcccccHH
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT-EENKCTEMAR-ECSDIVISAVGSLL 842 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa-mg~~gte~ak-~aADivl~~f~~I~ 842 (1108)
=...++.+.-....++|+|| ..+|+.|-+.|++-.. +. .+.+... ..+|+++.++..+.
T Consensus 278 fl~A~~~lgl~Peecl~IGD-S~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s~~EL~ 338 (381)
T PLN02575 278 FIYAAQLLNFIPERCIVFGN-SNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRRLDELS 338 (381)
T ss_pred HHHHHHHcCCCcccEEEEcC-CHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECCHHHHH
Confidence 12233333333567999999 9999999999998633 33 2222221 34777776666553
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.22 Score=50.63 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=75.1
Q ss_pred HHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec--ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCC
Q 043360 666 LIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL--REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 743 (1108)
Q Consensus 666 ~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i--r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~ 743 (1108)
..+.+..+|+|.+.+-... |++..-.- -|++.+-+++++++|+++.++|--+...+...++.+|+.-
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-----------TLv~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f 87 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-----------TLVPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF 87 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-----------ceecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce
Confidence 3467888999999877644 44333333 6788888999999999999999999999999999999974
Q ss_pred CCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhC---CCEEEEEeCCCCCCHHH
Q 043360 744 PESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEK---GHVVAFFGGSSTRDTPA 809 (1108)
Q Consensus 744 ~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~---g~~Va~iGD~G~ND~~a 809 (1108)
|+--..|.-+ .+-+++++. -+.|+||||-=--|+-+
T Consensus 88 -----------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlg 126 (175)
T COG2179 88 -----------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLG 126 (175)
T ss_pred -----------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhc
Confidence 4433445443 455666665 56899999922335544
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.1 Score=53.57 Aligned_cols=99 Identities=17% Similarity=0.180 Sum_probs=70.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcC----CCCC----CCCccccchhhhhhcCHHHHHHHhcccceec
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG----NFRP----ESNDIALEGEQFRELNSTERMAKLDSMTLMG 775 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~G----I~~~----~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~a 775 (1108)
+|+-++.++.+++.++.++++|+--..-...+-...+ |..- ++..+..+|+-.- +.-
T Consensus 75 dp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i---------------~~~ 139 (220)
T COG4359 75 DPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSI---------------KYT 139 (220)
T ss_pred CccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceee---------------ecC
Confidence 9999999999999999999999877666666655554 2210 1111222222110 111
Q ss_pred ccC--HhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe
Q 043360 776 SCL--ADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT 818 (1108)
Q Consensus 776 r~s--P~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa 818 (1108)
.-+ -.+|...|+.+++..+.+-|+|| |+.|..|-+.+|+=+|
T Consensus 140 ~ds~fG~dK~~vI~~l~e~~e~~fy~GD-svsDlsaaklsDllFA 183 (220)
T COG4359 140 DDSQFGHDKSSVIHELSEPNESIFYCGD-SVSDLSAAKLSDLLFA 183 (220)
T ss_pred CccccCCCcchhHHHhhcCCceEEEecC-CcccccHhhhhhhHhh
Confidence 112 25899999999999999999999 9999999999988775
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.11 Score=56.09 Aligned_cols=119 Identities=16% Similarity=0.106 Sum_probs=75.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.++++.|+ +|+++.++|......+...-++.|+... -..++.+.+. ....|. ..
T Consensus 97 ~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~v~~~~~~------------------~~~KP~-p~ 154 (224)
T PRK09449 97 LPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY--FDLLVISEQV------------------GVAKPD-VA 154 (224)
T ss_pred CccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH--cCEEEEECcc------------------CCCCCC-HH
Confidence 799999999999 6899999999888888888888888531 1122222111 112232 12
Q ss_pred HHHHHHHhCC----CEEEEEeCCCC-CCHHHHhhCCcc-EecCCCccH-HHHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEKG----HVVAFFGGSST-RDTPALKEADVG-ITEENKCTE-MARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~g----~~Va~iGD~G~-ND~~aLk~AdVG-Iamg~~gte-~ak~aADivl~~f~~I~~li 845 (1108)
-+-+.+++.| +.+.|||| .. +|+.+-+.|++- |.+...|.+ .....+|+++.++..|..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD-~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGD-NLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcC-CcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 2233334333 46999999 98 799999999985 333312221 11124677777777776654
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.11 Score=56.00 Aligned_cols=91 Identities=18% Similarity=0.212 Sum_probs=64.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.++++.|++.|+++.++|+-+...+....+.+|+... -..++.+.+ ..+..|...
T Consensus 96 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~------------------~~~~KP~~~- 154 (221)
T TIGR02253 96 YPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF--FDAVITSEE------------------EGVEKPHPK- 154 (221)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh--ccEEEEecc------------------CCCCCCCHH-
Confidence 89999999999999999999999988888888888888642 122222221 112233221
Q ss_pred HHHHHHHhC---CCEEEEEeCCCC-CCHHHHhhCCcc
Q 043360 784 LLVQSVKEK---GHVVAFFGGSST-RDTPALKEADVG 816 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~-ND~~aLk~AdVG 816 (1108)
-+-+.+++. ...+.|+|| .. +|+.+-++|++-
T Consensus 155 ~~~~~~~~~~~~~~~~~~igD-s~~~di~~A~~aG~~ 190 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGD-RLDKDIKGAKNLGMK 190 (221)
T ss_pred HHHHHHHHcCCChhhEEEECC-ChHHHHHHHHHCCCE
Confidence 222333443 357999999 97 999999999874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.14 Score=53.09 Aligned_cols=92 Identities=22% Similarity=0.196 Sum_probs=59.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|+++|+++.++|+-.... ..+..++|+... -..++.+.+.. ...-.|+-=.
T Consensus 87 ~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~--f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 87 LPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL--FDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH--CCEEEEcCCCC----------------CCCCCHHHHH
Confidence 8999999999999999999999988777 556556888542 12222222110 1111122222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADV 815 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV 815 (1108)
.+.+.+.-....+.++|| ...|+.+-++|++
T Consensus 148 ~~~~~~~~~~~~~~~vgD-~~~di~aA~~~G~ 178 (183)
T TIGR01509 148 LALKKLGLKPEECLFVDD-SPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHcCCCcceEEEEcC-CHHHHHHHHHcCC
Confidence 233333223467999999 9999998888876
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.096 Score=56.44 Aligned_cols=118 Identities=15% Similarity=0.070 Sum_probs=72.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH-
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK- 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K- 782 (1108)
.|++.+.++.|++. +++.++|+-....+..+.++.|+... -+.++.+.+. .+..|...
T Consensus 99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~--fd~i~~~~~~------------------~~~KP~~~~ 157 (224)
T TIGR02254 99 LPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPF--FDDIFVSEDA------------------GIQKPDKEI 157 (224)
T ss_pred CccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhh--cCEEEEcCcc------------------CCCCCCHHH
Confidence 89999999999999 99999999999999999999998642 1122211111 11123221
Q ss_pred -HHHHHHH-HhCCCEEEEEeCCCC-CCHHHHhhCCccE-ecCC-CccHHHHhccchhhcccccHHH
Q 043360 783 -LLLVQSV-KEKGHVVAFFGGSST-RDTPALKEADVGI-TEEN-KCTEMARECSDIVISAVGSLLP 843 (1108)
Q Consensus 783 -~~iV~~l-q~~g~~Va~iGD~G~-ND~~aLk~AdVGI-amg~-~gte~ak~aADivl~~f~~I~~ 843 (1108)
....+.+ .-.-..++|||| .. +|+.+-+.+++-. .... ...+.....+|.++.+++.|..
T Consensus 158 ~~~~~~~~~~~~~~~~v~igD-~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 158 FNYALERMPKFSKEEVLMIGD-SLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred HHHHHHHhcCCCchheEEECC-CcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHh
Confidence 2222222 112356999999 98 8999999999632 2221 1111122345666656555544
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.15 Score=57.78 Aligned_cols=122 Identities=14% Similarity=0.088 Sum_probs=72.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.+.++.|++.|+++.++|+-+......+-+..++......-.++.+.+.. ..+-.|+-=.
T Consensus 146 ~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~~~ 209 (286)
T PLN02779 146 RPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDIYN 209 (286)
T ss_pred hhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHHHH
Confidence 899999999999999999999998888887766655322110010111222211 0111122112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccH--HHHhccchhhcccccHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTE--MARECSDIVISAVGSLL 842 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte--~ak~aADivl~~f~~I~ 842 (1108)
.+.+.+.-....++|||| +.+|+.|-++|++....-..|.. -....+|+++.++..+.
T Consensus 210 ~a~~~~~~~p~~~l~IGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 210 LAAETLGVDPSRCVVVED-SVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred HHHHHhCcChHHEEEEeC-CHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcc
Confidence 233333222456999999 99999999999987553223321 11134788777555544
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.11 Score=53.11 Aligned_cols=94 Identities=19% Similarity=0.213 Sum_probs=65.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|++++++|+-.........+..|+... -..++.+.+... ..-.|+-=.
T Consensus 79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~~----------------~Kp~~~~~~ 140 (176)
T PF13419_consen 79 YPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVGS----------------RKPDPDAYR 140 (176)
T ss_dssp STTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSSS----------------STTSHHHHH
T ss_pred hhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhhh----------------hhhHHHHHH
Confidence 89999999999999999999999999999999999998732 122222222110 111112112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
.+.+.+.-..+.++++|| ...|+.+-++|++-
T Consensus 141 ~~~~~~~~~p~~~~~vgD-~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 141 RALEKLGIPPEEILFVGD-SPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHTSSGGGEEEEES-SHHHHHHHHHTTSE
T ss_pred HHHHHcCCCcceEEEEeC-CHHHHHHHHHcCCe
Confidence 333333323567999999 99999999988764
|
... |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.14 Score=53.37 Aligned_cols=104 Identities=16% Similarity=0.178 Sum_probs=69.3
Q ss_pred HhCCCeEEEEEEecCcchhhhccCceee--EEEecccchHHHHHHHHHcCCEEEEecCCc-HHHHHHHHHHcCCCCCCCC
Q 043360 671 EDSGLRPIAFACGQTEVSEIKENGLHLL--ALAGLREEIKSTVEALRNAGVRIILVSEDE-LLAVTEVACELGNFRPESN 747 (1108)
Q Consensus 671 a~~GlR~L~~A~k~l~~~~~~E~~l~ll--G~i~ir~~v~~aI~~l~~aGI~v~mlTGD~-~~tA~~IA~~~GI~~~~~~ 747 (1108)
...|.+.+.+-... ++. ...-+.|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+..
T Consensus 21 ~~~~v~~vv~D~Dg-----------tl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---- 85 (170)
T TIGR01668 21 KKVGIKGVVLDKDN-----------TLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---- 85 (170)
T ss_pred HHCCCCEEEEecCC-----------ccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE----
Confidence 45777777776522 211 111117999999999999999999999987 677788888888742
Q ss_pred ccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhC---CCEEEEEeCCCC-CCHHHHhhCCcc
Q 043360 748 DIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEK---GHVVAFFGGSST-RDTPALKEADVG 816 (1108)
Q Consensus 748 ~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~---g~~Va~iGD~G~-ND~~aLk~AdVG 816 (1108)
......|... .+-..+++. .+.++|||| .. .|..+-+.|++-
T Consensus 86 -------------------------~~~~~KP~p~-~~~~~l~~~~~~~~~~l~IGD-s~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 86 -------------------------LPHAVKPPGC-AFRRAHPEMGLTSEQVAVVGD-RLFTDVMGGNRNGSY 131 (170)
T ss_pred -------------------------EcCCCCCChH-HHHHHHHHcCCCHHHEEEECC-cchHHHHHHHHcCCe
Confidence 1111233211 222333333 356999999 87 699999998874
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=93.40 E-value=0.14 Score=60.39 Aligned_cols=92 Identities=13% Similarity=0.126 Sum_probs=63.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHH-HcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVAC-ELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~-~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
.||+.+.++.|++.|+++.++|+-....+...-+ ..|+... -..++.+++. .+..|.-
T Consensus 95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~--Fd~ii~~d~v------------------~~~KP~p- 153 (382)
T PLN02940 95 LPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES--FSVIVGGDEV------------------EKGKPSP- 153 (382)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh--CCEEEehhhc------------------CCCCCCH-
Confidence 7999999999999999999999998888876655 6777542 2333333321 1222311
Q ss_pred HHHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCccE
Q 043360 783 LLLVQSVKEK---GHVVAFFGGSSTRDTPALKEADVGI 817 (1108)
Q Consensus 783 ~~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~AdVGI 817 (1108)
.-+.+.+++. .+.++|+|| ..+|+.+-+.|++..
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGD-s~~Di~aA~~aGi~~ 190 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIED-SLPGVMAGKAAGMEV 190 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeC-CHHHHHHHHHcCCEE
Confidence 1222333333 467999999 999999999999873
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.13 Score=55.93 Aligned_cols=90 Identities=22% Similarity=0.191 Sum_probs=63.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.+.++.|++.|+++.++|.-....+...-+..|+... -..++.+.++ .+..|+ .
T Consensus 95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~iv~s~~~------------------~~~KP~--p 152 (224)
T PRK14988 95 REDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH--LDLLLSTHTF------------------GYPKED--Q 152 (224)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH--CCEEEEeeeC------------------CCCCCC--H
Confidence 89999999999999999999999888888888788887542 1222222211 122231 2
Q ss_pred HHHH-HHHhC---CCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 784 LLVQ-SVKEK---GHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 784 ~iV~-~lq~~---g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
++.+ .+++. .+.++|+|| ..+|+.+-+.|++.
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igD-s~~di~aA~~aG~~ 188 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDD-SEPILDAAAQFGIR 188 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcC-CHHHHHHHHHcCCe
Confidence 2222 22333 356999999 99999999999996
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.14 Score=53.39 Aligned_cols=89 Identities=12% Similarity=0.134 Sum_probs=59.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.++++.|++.|+++.++|+- ..+..+-+.+|+... -..++.+.+. .+..|...
T Consensus 90 ~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~--f~~v~~~~~~------------------~~~kp~~~- 146 (185)
T TIGR02009 90 LPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY--FDAIVDADEV------------------KEGKPHPE- 146 (185)
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH--CCEeeehhhC------------------CCCCCChH-
Confidence 899999999999999999999986 667777788888542 1122222111 11223211
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 784 LLVQSVKEK---GHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
-+-+.+++. .+.+.++|| ..+|+.+-+.|++.
T Consensus 147 ~~~~~~~~~~~~~~~~v~IgD-~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 TFLLAAELLGVSPNECVVFED-ALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEeC-cHhhHHHHHHCCCe
Confidence 112233333 356889999 99999999999774
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.6 Score=49.45 Aligned_cols=47 Identities=23% Similarity=0.245 Sum_probs=39.2
Q ss_pred ceeeEEEec-ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCC
Q 043360 695 LHLLALAGL-REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 742 (1108)
Q Consensus 695 l~llG~i~i-r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~ 742 (1108)
-++++ -+. -..+.+.+.+|+++|+.|+.+|.-....-...-+++|+.
T Consensus 16 ~TLl~-~~ye~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 16 GTLLP-HSYEWQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CcccC-CCCCCCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 35555 334 667889999999999999999999888888888999987
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.33 Score=50.71 Aligned_cols=99 Identities=14% Similarity=0.114 Sum_probs=65.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCC-cHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSED-ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD-~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
.||+.+.++.|+++|+++.++|+- ....+..+-..+|+... +. . ..+.+.++. .+.++-.+..|
T Consensus 47 ~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~--~~------~------~~~~~~Fd~-iv~~~~~~~~k 111 (174)
T TIGR01685 47 IKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYA--GK------T------VPMHSLFDD-RIEIYKPNKAK 111 (174)
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCC--CC------c------ccHHHhcee-eeeccCCchHH
Confidence 899999999999999999999965 88999999999998521 00 0 000011111 02222211122
Q ss_pred --HHHHHHHHhC------CCEEEEEeCCCCCCHHHHhhCCccEe
Q 043360 783 --LLLVQSVKEK------GHVVAFFGGSSTRDTPALKEADVGIT 818 (1108)
Q Consensus 783 --~~iV~~lq~~------g~~Va~iGD~G~ND~~aLk~AdVGIa 818 (1108)
..+.+.+.+. -..++|+|| ...|+.+-++|++-..
T Consensus 112 p~~~i~~~~~~~~~~gl~p~e~l~VgD-s~~di~aA~~aGi~~i 154 (174)
T TIGR01685 112 QLEMILQKVNKVDPSVLKPAQILFFDD-RTDNVREVWGYGVTSC 154 (174)
T ss_pred HHHHHHHHhhhcccCCCCHHHeEEEcC-hhHhHHHHHHhCCEEE
Confidence 2334444332 357999999 9999999999988665
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=92.64 E-value=0.27 Score=55.92 Aligned_cols=103 Identities=14% Similarity=-0.036 Sum_probs=70.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.+++.++++.|++.|+++.++||....++..+.+.+|+.... -. .+.|.+- ...+ +... ---+-.|+-|.
T Consensus 189 ~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~-f~-~i~~~~~----~~~~---~~~~-~~~kp~p~~~~ 258 (300)
T PHA02530 189 NPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIW-FD-DLIGRPP----DMHF---QREQ-GDKRPDDVVKE 258 (300)
T ss_pred ChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCc-hh-hhhCCcc----hhhh---cccC-CCCCCcHHHHH
Confidence 899999999999999999999999999999999999886410 01 1111110 0000 0000 01244566666
Q ss_pred HHHHHHHh-CCCEEEEEeCCCCCCHHHHhhCCccE
Q 043360 784 LLVQSVKE-KGHVVAFFGGSSTRDTPALKEADVGI 817 (1108)
Q Consensus 784 ~iV~~lq~-~g~~Va~iGD~G~ND~~aLk~AdVGI 817 (1108)
...+.+-. .-..++|+|| ..+|+.+-+.|++-.
T Consensus 259 ~~l~~~~~~~~~~~~~vgD-~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 259 EIFWEKIAPKYDVLLAVDD-RDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHhccCceEEEEEcC-cHHHHHHHHHhCCeE
Confidence 66665433 2378999999 999999999998874
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=91.88 E-value=0.34 Score=51.57 Aligned_cols=89 Identities=15% Similarity=0.176 Sum_probs=56.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
-|++.++++.|++.|+++.++|+-... +..+.+.+|+... -..++.+.+. ....|+ ..
T Consensus 107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~--fd~i~~s~~~------------------~~~KP~-~~ 164 (203)
T TIGR02252 107 YPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY--FDFVVTSYEV------------------GAEKPD-PK 164 (203)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh--cceEEeeccc------------------CCCCCC-HH
Confidence 799999999999999999999975543 4667777887532 1122222111 111221 11
Q ss_pred HHHHHHHhC---CCEEEEEeCCCC-CCHHHHhhCCc
Q 043360 784 LLVQSVKEK---GHVVAFFGGSST-RDTPALKEADV 815 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~-ND~~aLk~AdV 815 (1108)
-+-+.+++. ...++|||| .. +|+.+-++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD-~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGD-SLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECC-CchHHHHHHHHcCC
Confidence 222333333 357999999 97 89998888765
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.32 Score=53.10 Aligned_cols=108 Identities=18% Similarity=0.232 Sum_probs=70.0
Q ss_pred ccchHHHHHHH--HHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchh-hhhhcCHHHHHHHhcc-cceecccCH
Q 043360 704 REEIKSTVEAL--RNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGE-QFRELNSTERMAKLDS-MTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l--~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~-~l~~l~~~~~~~~~~~-~~V~ar~sP 779 (1108)
.|+.+++++.| ++.|+.+.++|--|..--..|=+.-|+... -..+.+-+ .++. .. ...+.+- -+-|.++.|
T Consensus 73 ~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~--f~~I~TNpa~~~~-~G--~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 73 DPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC--FSEIFTNPACFDA-DG--RLRVRPYHSHGCSLCPP 147 (234)
T ss_pred CccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc--cceEEeCCceecC-Cc--eEEEeCccCCCCCcCCC
Confidence 89999999999 458999999999999999999999998642 11111111 1100 00 0000000 013445555
Q ss_pred -hhHHHHHHHHHhC----C---CEEEEEeCCCCCCH-HHHh--hCCccE
Q 043360 780 -DDKLLLVQSVKEK----G---HVVAFFGGSSTRDT-PALK--EADVGI 817 (1108)
Q Consensus 780 -~~K~~iV~~lq~~----g---~~Va~iGD~G~ND~-~aLk--~AdVGI 817 (1108)
.=|..+++.+++. | ..|.++|| |.||- |+++ .+|+-.
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGD-G~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGD-GRNDFCPALRLRPRDVVF 195 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECC-CCCCcCcccccCCCCEEe
Confidence 4799999888765 4 69999999 99995 4543 555544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.48 Score=47.89 Aligned_cols=87 Identities=16% Similarity=0.236 Sum_probs=55.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.+++.+.++.|++.|+++.++|+-....+....+.. +... ...++..++ + . ..|. ..
T Consensus 66 ~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~--f~~i~~~~~-----------------~-~-~Kp~-~~ 122 (154)
T TIGR01549 66 IRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY--FDLILGSDE-----------------F-G-AKPE-PE 122 (154)
T ss_pred ccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc--CcEEEecCC-----------------C-C-CCcC-HH
Confidence 689999999999999999999999998888877765 3321 011111100 1 1 1221 12
Q ss_pred HHHHHHHhCCC--EEEEEeCCCCCCHHHHhhCC
Q 043360 784 LLVQSVKEKGH--VVAFFGGSSTRDTPALKEAD 814 (1108)
Q Consensus 784 ~iV~~lq~~g~--~Va~iGD~G~ND~~aLk~Ad 814 (1108)
-+.+.+++.|. .++++|| ..+|+.|-+.|+
T Consensus 123 ~~~~~~~~~~~~~~~l~iGD-s~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPPEVLHVGD-NLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCCCEEEEeC-CHHHHHHHHHcc
Confidence 22223333322 7999999 899998877763
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=90.63 E-value=0.58 Score=47.29 Aligned_cols=91 Identities=19% Similarity=0.196 Sum_probs=56.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcH---------------HHHHHHHHHcCCCCCCCCccccch---hhhhhcCHHHHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDEL---------------LAVTEVACELGNFRPESNDIALEG---EQFRELNSTERM 765 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~~IA~~~GI~~~~~~~~vi~G---~~l~~l~~~~~~ 765 (1108)
.|++.++++.|++.|+++.++|.... ..+..+.+.+|+... ...... .+.
T Consensus 29 ~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~---~~~~~~~~~~~~--------- 96 (147)
T TIGR01656 29 RPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD---GVLFCPHHPADN--------- 96 (147)
T ss_pred cCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee---EEEECCCCCCCC---------
Confidence 89999999999999999999998652 445566777887521 000000 000
Q ss_pred HHhcccceecccCHhhHHHHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 766 AKLDSMTLMGSCLADDKLLLVQSVKEK---GHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 766 ~~~~~~~V~ar~sP~~K~~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
.-. ..|+-+ -+-..+++. -+.+.|||| ...|+.+-+.|++-
T Consensus 97 -------~~~-~KP~~~-~~~~~~~~~~~~~~e~i~IGD-s~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSC-RKPKPG-LILEALKRLGVDASRSLVVGD-RLRDLQAARNAGLA 140 (147)
T ss_pred -------CCC-CCCCHH-HHHHHHHHcCCChHHEEEEcC-CHHHHHHHHHCCCC
Confidence 000 123211 122233333 356999999 89999988888764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.55 E-value=0.43 Score=51.54 Aligned_cols=125 Identities=10% Similarity=0.050 Sum_probs=76.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||++++++.| ++++.++|+.....+...-+..|+... ....++.+.+.. +..|.- .
T Consensus 90 ~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~-F~~~v~~~~~~~------------------~~KP~p-~ 146 (221)
T PRK10563 90 IAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHY-FPDKLFSGYDIQ------------------RWKPDP-A 146 (221)
T ss_pred CCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHh-CcceEeeHHhcC------------------CCCCCh-H
Confidence 68999999988 499999999998888888788888642 112344443221 111211 1
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCccEecCC--CccHHHHhccchhhcccccHHHHHHhhhhhh
Q 043360 784 LLVQSVKEK---GHVVAFFGGSSTRDTPALKEADVGITEEN--KCTEMARECSDIVISAVGSLLPILKLGRCAY 852 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~AdVGIamg~--~gte~ak~aADivl~~f~~I~~li~~GR~~~ 852 (1108)
-+-..+++. .+.++|+|| ..+|+.+=++|++....-. .+.+..+..++.++.++..+.+.+..+-+.+
T Consensus 147 ~~~~a~~~~~~~p~~~l~igD-s~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 219 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDD-SSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELWKARGWDI 219 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeC-cHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHHHHhcccc
Confidence 111222222 346899999 9999999999998765221 1222222344555557777777666554443
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=90.19 E-value=0.74 Score=48.03 Aligned_cols=25 Identities=16% Similarity=0.432 Sum_probs=23.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCc
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDE 728 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~ 728 (1108)
.|++.++++.|+++|+++.++|.-.
T Consensus 28 ~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 28 IDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 7899999999999999999999755
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=89.15 E-value=0.75 Score=49.75 Aligned_cols=114 Identities=12% Similarity=0.091 Sum_probs=65.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHH-HHHHcCCCCCCCCccccchh--hhhhcCHHHHHHHhcccceecccCHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTE-VACELGNFRPESNDIALEGE--QFRELNSTERMAKLDSMTLMGSCLAD 780 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~-IA~~~GI~~~~~~~~vi~G~--~l~~l~~~~~~~~~~~~~V~ar~sP~ 780 (1108)
.||+.+.|+.|++.|+++.++||-....... ..+..|+... ...++.+. +. .+..|+
T Consensus 80 ~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~~~~~~~------------------~~~KP~ 139 (220)
T PLN02811 80 MPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVTGDDPEV------------------KQGKPA 139 (220)
T ss_pred CccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEECChhhc------------------cCCCCC
Confidence 7999999999999999999999977654432 2222233221 11122221 11 011121
Q ss_pred hHHHHHHHHHhC------CCEEEEEeCCCCCCHHHHhhCCccEe-cCCCcc--HHHHhccchhhccccc
Q 043360 781 DKLLLVQSVKEK------GHVVAFFGGSSTRDTPALKEADVGIT-EENKCT--EMARECSDIVISAVGS 840 (1108)
Q Consensus 781 ~K~~iV~~lq~~------g~~Va~iGD~G~ND~~aLk~AdVGIa-mg~~gt--e~ak~aADivl~~f~~ 840 (1108)
- .-+.+.+++. .+.+.|||| ...|+.|-+.|++-.. +. .+. ......+|+++.++..
T Consensus 140 p-~~~~~a~~~~~~~~~~~~~~v~IgD-s~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~d~vi~~~~e 205 (220)
T PLN02811 140 P-DIFLAAARRFEDGPVDPGKVLVFED-APSGVEAAKNAGMSVVMVP-DPRLDKSYCKGADQVLSSLLD 205 (220)
T ss_pred c-HHHHHHHHHhCCCCCCccceEEEec-cHhhHHHHHHCCCeEEEEe-CCCCcHhhhhchhhHhcCHhh
Confidence 1 1222233333 367999999 9999999999998643 22 221 1112356777665543
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=89.00 E-value=0.42 Score=48.47 Aligned_cols=90 Identities=11% Similarity=-0.004 Sum_probs=63.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
||++.+.++.|+ .++++.++|.-....+..+-+.+|+... ....++.+++.. +..|.
T Consensus 47 ~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~------------------~~KP~--- 103 (148)
T smart00577 47 RPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV------------------FVKGK--- 103 (148)
T ss_pred CCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc------------------ccCCe---
Confidence 999999999999 5799999999999999999999987531 112233332211 11222
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCccEe
Q 043360 784 LLVQSVKEK---GHVVAFFGGSSTRDTPALKEADVGIT 818 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~AdVGIa 818 (1108)
+.+.+++. -+.+.|+|| ..+|..|-++|.|-|.
T Consensus 104 -~~k~l~~l~~~p~~~i~i~D-s~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 -YVKDLSLLGRDLSNVIIIDD-SPDSWPFHPENLIPIK 139 (148)
T ss_pred -EeecHHHcCCChhcEEEEEC-CHHHhhcCccCEEEec
Confidence 44444433 467999999 9999998777766554
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=88.71 E-value=1 Score=60.14 Aligned_cols=131 Identities=14% Similarity=0.114 Sum_probs=83.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH-
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK- 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K- 782 (1108)
.||+.+.++.|+++|+++.++|+-....+..+-++.|+.... -..++.+++. .+..|+..
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~-Fd~iv~~~~~------------------~~~KP~Pe~ 223 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM-FDAIVSADAF------------------ENLKPAPDI 223 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH-CCEEEECccc------------------ccCCCCHHH
Confidence 689999999999999999999999999999888999985210 1233333322 12223211
Q ss_pred -HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-EecC--CCccHHHHhccchhhccccc--HHHHHHhhhhhhhh
Q 043360 783 -LLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE--NKCTEMARECSDIVISAVGS--LLPILKLGRCAYCN 854 (1108)
Q Consensus 783 -~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG-Iamg--~~gte~ak~aADivl~~f~~--I~~li~~GR~~~~~ 854 (1108)
....+.+.-..+.+.|+|| ..+|+.|-+.|++- |++. ....+.....+|+++.++.. +..++..|-..+.|
T Consensus 224 ~~~a~~~lgv~p~e~v~IgD-s~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~~ 300 (1057)
T PLN02919 224 FLAAAKILGVPTSECVVIED-ALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATPN 300 (1057)
T ss_pred HHHHHHHcCcCcccEEEEcC-CHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCCC
Confidence 2222333223467999999 99999999999984 3333 11222344567888875554 44444445444444
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=88.62 E-value=1.2 Score=46.10 Aligned_cols=38 Identities=16% Similarity=0.247 Sum_probs=30.8
Q ss_pred cchHHHHHHHHHcCCEEEEecCCcH------------HHHHHHHHHcCCC
Q 043360 705 EEIKSTVEALRNAGVRIILVSEDEL------------LAVTEVACELGNF 742 (1108)
Q Consensus 705 ~~v~~aI~~l~~aGI~v~mlTGD~~------------~tA~~IA~~~GI~ 742 (1108)
||+.++++.|+++|+++.++|.-.. ..+..+.+.+|+.
T Consensus 45 pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 45 PEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 8999999999999999999996443 2455677788874
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=88.60 E-value=1.4 Score=49.28 Aligned_cols=81 Identities=19% Similarity=0.135 Sum_probs=55.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHH---HHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELL---AVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAD 780 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~---tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~ 780 (1108)
-|++.+.++.+++.|+++.++|+.... .....-++.|+....... ++.|-...
T Consensus 120 ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~------------------------lllr~~~~ 175 (266)
T TIGR01533 120 VAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH------------------------LLLKKDKS 175 (266)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce------------------------EEeCCCCC
Confidence 689999999999999999999997633 334555678886421111 33332223
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHH
Q 043360 781 DKLLLVQSVKEKGHVVAFFGGSSTRDTPA 809 (1108)
Q Consensus 781 ~K~~iV~~lq~~g~~Va~iGD~G~ND~~a 809 (1108)
.|..-.+.+.+.-.+++++|| -.+|...
T Consensus 176 ~K~~rr~~I~~~y~Ivl~vGD-~~~Df~~ 203 (266)
T TIGR01533 176 SKESRRQKVQKDYEIVLLFGD-NLLDFDD 203 (266)
T ss_pred CcHHHHHHHHhcCCEEEEECC-CHHHhhh
Confidence 455555666665568999999 8888754
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=88.11 E-value=0.88 Score=46.91 Aligned_cols=91 Identities=11% Similarity=0.166 Sum_probs=57.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCC---------------cHHHHHHHHHHcCCCCCCCCccccc----hhhhhhcCHHHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSED---------------ELLAVTEVACELGNFRPESNDIALE----GEQFRELNSTER 764 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD---------------~~~tA~~IA~~~GI~~~~~~~~vi~----G~~l~~l~~~~~ 764 (1108)
-|++.++++.|+++|+++.++|-- ....+..+.++.|+.- ...++. +++
T Consensus 31 ~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d~ii~~~~~~~~~--------- 98 (161)
T TIGR01261 31 EKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---DDVLICPHFPDDN--------- 98 (161)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---eEEEECCCCCCCC---------
Confidence 689999999999999999999974 2345566667777741 111111 010
Q ss_pred HHHhcccceecccCHhhHHHHHHH-HHhC---CCEEEEEeCCCCCCHHHHhhCCccEe
Q 043360 765 MAKLDSMTLMGSCLADDKLLLVQS-VKEK---GHVVAFFGGSSTRDTPALKEADVGIT 818 (1108)
Q Consensus 765 ~~~~~~~~V~ar~sP~~K~~iV~~-lq~~---g~~Va~iGD~G~ND~~aLk~AdVGIa 818 (1108)
..+ ..|. ..+++. +++. ...+.|||| +.+|..+-+.|++-..
T Consensus 99 --------~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD-~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 99 --------CDC-RKPK--IKLLEPYLKKNLIDKARSYVIGD-RETDMQLAENLGIRGI 144 (161)
T ss_pred --------CCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeC-CHHHHHHHHHCCCeEE
Confidence 111 1232 222222 2333 246999999 9999999999987644
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=87.95 E-value=1.6 Score=43.00 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=33.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCC-cHHHHHHHHHHcC
Q 043360 704 REEIKSTVEALRNAGVRIILVSED-ELLAVTEVACELG 740 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD-~~~tA~~IA~~~G 740 (1108)
.+++.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 31 ~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 31 IKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 789999999999999999999999 7877777777766
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=87.74 E-value=0.41 Score=52.83 Aligned_cols=66 Identities=12% Similarity=0.119 Sum_probs=48.8
Q ss_pred ccCHhhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhC--------CccEecCCCccHHHHhccchhhcccccHHH
Q 043360 776 SCLADDKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEA--------DVGITEENKCTEMARECSDIVISAVGSLLP 843 (1108)
Q Consensus 776 r~sP~~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~A--------dVGIamg~~gte~ak~aADivl~~f~~I~~ 843 (1108)
+..+.+|...++.+.+. ...++|+|| +.||.+|++.+ ..||+|+ .|. .+..|++++.+...+..
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD-~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~~~~~v~~ 237 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGD-DITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLTGPQQVLE 237 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcC-CCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCCCHHHHHH
Confidence 44466898888877655 347999999 99999999998 4788885 332 34668898887666665
Q ss_pred HH
Q 043360 844 IL 845 (1108)
Q Consensus 844 li 845 (1108)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 54
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.39 E-value=1.3 Score=51.62 Aligned_cols=95 Identities=9% Similarity=0.051 Sum_probs=58.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCC---------------cHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSED---------------ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 768 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD---------------~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~ 768 (1108)
.|++.++++.|+++|+++.++|.= ....+..+.+..|+.- ...++....- .+
T Consensus 32 ~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f---d~i~i~~~~~----sd------ 98 (354)
T PRK05446 32 EPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF---DEVLICPHFP----ED------ 98 (354)
T ss_pred CcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce---eeEEEeCCcC----cc------
Confidence 899999999999999999999982 1334556666777642 1111110000 00
Q ss_pred cccceecccCHhhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEe
Q 043360 769 DSMTLMGSCLADDKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGIT 818 (1108)
Q Consensus 769 ~~~~V~ar~sP~~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIa 818 (1108)
...+| .|+ ..++..+.++ ...+.|||| +.+|..+-+.|++-..
T Consensus 99 ---~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGD-s~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 ---NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGD-RETDVQLAENMGIKGI 145 (354)
T ss_pred ---cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcC-CHHHHHHHHHCCCeEE
Confidence 01111 222 2333333222 367999999 9999999999988643
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=86.20 E-value=2.3 Score=55.26 Aligned_cols=66 Identities=12% Similarity=0.201 Sum_probs=48.0
Q ss_pred HHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec----ccchHHHHHHH-HHcCCEEEEecCCcHHHHHHHHH
Q 043360 663 FQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEAL-RNAGVRIILVSEDELLAVTEVAC 737 (1108)
Q Consensus 663 ~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l-~~aGI~v~mlTGD~~~tA~~IA~ 737 (1108)
..+.++.|.....|.+++-| |.|++-.... -+++.+++++| ++.|+.|.++||....+....-.
T Consensus 584 ~~~i~~~y~~~~~rlI~LDy-----------DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 584 MEHIVSAYKRTTTRAILLDY-----------DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHHHhhcCeEEEEec-----------CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34455666666667777766 5566644332 56889999997 77899999999999999988775
Q ss_pred Hc
Q 043360 738 EL 739 (1108)
Q Consensus 738 ~~ 739 (1108)
.+
T Consensus 653 ~~ 654 (854)
T PLN02205 653 PC 654 (854)
T ss_pred CC
Confidence 43
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=85.93 E-value=2.7 Score=46.19 Aligned_cols=85 Identities=12% Similarity=0.159 Sum_probs=54.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHH--HHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVT--EVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~--~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~ 781 (1108)
-|+++++++.|+++|+++.++|.-....+. ...+++|+..+. ...+++..+..
T Consensus 26 ~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~s~~~~------------------------ 80 (242)
T TIGR01459 26 YPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIISSGEIA------------------------ 80 (242)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEccHHHH------------------------
Confidence 699999999999999999999985554443 556788886411 12222222110
Q ss_pred HHHHHHHHHh---CCCEEEEEeCCCCCCHHHHhhCC
Q 043360 782 KLLLVQSVKE---KGHVVAFFGGSSTRDTPALKEAD 814 (1108)
Q Consensus 782 K~~iV~~lq~---~g~~Va~iGD~G~ND~~aLk~Ad 814 (1108)
..-+.+.+++ .+..+.++|| +.+|...+..++
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~vGd-~~~d~~~~~~~~ 115 (242)
T TIGR01459 81 VQMILESKKRFDIRNGIIYLLGH-LENDIINLMQCY 115 (242)
T ss_pred HHHHHhhhhhccCCCceEEEeCC-cccchhhhcCCC
Confidence 1112222233 2467999999 999998886543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=85.87 E-value=2.6 Score=45.91 Aligned_cols=83 Identities=17% Similarity=0.069 Sum_probs=51.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHH---HHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccC-H
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAV---TEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL-A 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA---~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~s-P 779 (1108)
-|++.++++.+++.|++|+++||...... ..--++.|+..- ..+++.+..- .+.+ -
T Consensus 122 ip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~~LiLR~~~d------------------~~~~~~ 181 (229)
T TIGR01675 122 LPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--KHLILRGLED------------------SNKTVV 181 (229)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--CeeeecCCCC------------------CCchHh
Confidence 68899999999999999999999987552 222244676531 2222222100 0001 1
Q ss_pred hhHHHHHHHHHhCCC-EEEEEeCCCCCCH
Q 043360 780 DDKLLLVQSVKEKGH-VVAFFGGSSTRDT 807 (1108)
Q Consensus 780 ~~K~~iV~~lq~~g~-~Va~iGD~G~ND~ 807 (1108)
+-|...-+.+.+.|+ +++.+|| -.+|.
T Consensus 182 ~yKs~~R~~l~~~GYrIv~~iGD-q~sDl 209 (229)
T TIGR01675 182 TYKSEVRKSLMEEGYRIWGNIGD-QWSDL 209 (229)
T ss_pred HHHHHHHHHHHhCCceEEEEECC-ChHHh
Confidence 127666667776765 7788999 66665
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=85.42 E-value=1.7 Score=47.18 Aligned_cols=94 Identities=13% Similarity=0.103 Sum_probs=60.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcC---CCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG---NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAD 780 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~G---I~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~ 780 (1108)
.||+.+++++|+++|+++.++|.........+-+..+ +... ++ ..+. ..+...-.|+
T Consensus 97 ypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f~-------------~~fd-~~~g~KP~p~ 156 (220)
T TIGR01691 97 YPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------FS-------------GYFD-TTVGLKTEAQ 156 (220)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------cc-------------eEEE-eCcccCCCHH
Confidence 8999999999999999999999988877776665542 2110 00 0111 1111112222
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe
Q 043360 781 DKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT 818 (1108)
Q Consensus 781 ~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa 818 (1108)
-=..+.+.+.-..+.++++|| ...|+.|-++|++-..
T Consensus 157 ~y~~i~~~lgv~p~e~lfVgD-s~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 157 SYVKIAGQLGSPPREILFLSD-IINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHhCcChhHEEEEeC-CHHHHHHHHHcCCEEE
Confidence 222333333222367999999 9999999999998644
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=83.17 E-value=1.1 Score=47.97 Aligned_cols=92 Identities=12% Similarity=0.128 Sum_probs=52.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHH--HHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLA--VTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~t--A~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~ 781 (1108)
.|++.+.++.|++.|+++.++|...... +.......++... -..++...+ + ....|+-
T Consensus 96 ~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~--fd~v~~s~~-----------------~-~~~KP~p 155 (211)
T TIGR02247 96 RPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL--FDAVVESCL-----------------E-GLRKPDP 155 (211)
T ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh--CCEEEEeee-----------------c-CCCCCCH
Confidence 8999999999999999999999865433 2222222333221 011111110 0 0112321
Q ss_pred H--HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 782 K--LLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 782 K--~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
. ..+.+.+.-....++|+|| ...|+.+-++|++-
T Consensus 156 ~~~~~~~~~~g~~~~~~l~i~D-~~~di~aA~~aG~~ 191 (211)
T TIGR02247 156 RIYQLMLERLGVAPEECVFLDD-LGSNLKPAAALGIT 191 (211)
T ss_pred HHHHHHHHHcCCCHHHeEEEcC-CHHHHHHHHHcCCE
Confidence 1 2222222222356889999 99999999999885
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=82.73 E-value=3.7 Score=38.78 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=30.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHH---HHcCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVA---CELGNFR 743 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA---~~~GI~~ 743 (1108)
=|+++++|+.|+++|++++++|-....+...++ +++|+..
T Consensus 16 ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 16 IPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp -TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred CcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 589999999999999999999988765555444 5678764
|
... |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=82.64 E-value=2.3 Score=49.04 Aligned_cols=88 Identities=14% Similarity=0.103 Sum_probs=65.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHH----cCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE----LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~----~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP 779 (1108)
.+++.++++.|++.|+++.++|.-+...|..+-+. +|+... | .+.+..+
T Consensus 33 ~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~-----------f----------------~~~~~~~ 85 (320)
T TIGR01686 33 HKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAED-----------F----------------DARSINW 85 (320)
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHH-----------e----------------eEEEEec
Confidence 68999999999999999999999999999998888 766531 0 0111223
Q ss_pred hhHHHHHHHH-HhC---CCEEEEEeCCCCCCHHHHhhCCccEec
Q 043360 780 DDKLLLVQSV-KEK---GHVVAFFGGSSTRDTPALKEADVGITE 819 (1108)
Q Consensus 780 ~~K~~iV~~l-q~~---g~~Va~iGD~G~ND~~aLk~AdVGIam 819 (1108)
+-|...++.+ ++. -..++|+|| ...|+.+.+.+..++.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD-~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDD-NPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECC-CHHHHHHHHHHCCCCcc
Confidence 3455444443 333 368999999 99999999998887644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=82.13 E-value=12 Score=43.61 Aligned_cols=42 Identities=14% Similarity=0.105 Sum_probs=34.7
Q ss_pred CceeeEEEec------ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHH
Q 043360 694 GLHLLALAGL------REEIKSTVEALRNAGVRIILVSEDELLAVTEVA 736 (1108)
Q Consensus 694 ~l~llG~i~i------r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA 736 (1108)
|.||+-++.- -++..++|++|. .|+.|.++||........+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 6677755542 678899999999 78999999999999999884
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.73 E-value=1.7 Score=46.34 Aligned_cols=120 Identities=12% Similarity=0.171 Sum_probs=69.9
Q ss_pred ccchHHHHHHHHHcCC-EEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHh-h
Q 043360 704 REEIKSTVEALRNAGV-RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAD-D 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI-~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~-~ 781 (1108)
-|++.++|+.+++.|- .++++|--|.--...+-+..||..- -..+.+-+.--.....-...-...-.=|.|+-|. =
T Consensus 86 ~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~--F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmC 163 (256)
T KOG3120|consen 86 VPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL--FSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMC 163 (256)
T ss_pred CccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH--HHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhh
Confidence 7999999999999986 9999999998887777777776421 0000000000000000000000000124444332 3
Q ss_pred HHHHHHHHHhC------C-CEEEEEeCCCCCC-HHHHhhCCccEecCCCccHH
Q 043360 782 KLLLVQSVKEK------G-HVVAFFGGSSTRD-TPALKEADVGITEENKCTEM 826 (1108)
Q Consensus 782 K~~iV~~lq~~------g-~~Va~iGD~G~ND-~~aLk~AdVGIamg~~gte~ 826 (1108)
|..++..++.. . +.+.++|| |.|| ||+++...--+||-..|-..
T Consensus 164 Kg~Vl~~~~~s~~~~gv~yer~iYvGD-G~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 164 KGLVLDELVASQLKDGVRYERLIYVGD-GANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred hhHHHHHHHHHHhhcCCceeeEEEEcC-CCCCcCcchhcccCceecccCCCch
Confidence 66666665543 1 37999999 9999 67777777667776556554
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=81.22 E-value=3.9 Score=42.42 Aligned_cols=70 Identities=14% Similarity=0.048 Sum_probs=55.5
Q ss_pred ccchHHHHHHHHHcCC--EEEEecCC-------cHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhccccee
Q 043360 704 REEIKSTVEALRNAGV--RIILVSED-------ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM 774 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI--~v~mlTGD-------~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ 774 (1108)
-|++.+.+++|++.+. +|.++|-- +...|..+++.+||.-- .+
T Consensus 61 ~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl----------------------------~h 112 (168)
T PF09419_consen 61 PPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL----------------------------RH 112 (168)
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE----------------------------Ee
Confidence 7889999999999987 49999875 48899999999998630 12
Q ss_pred cccCHhhHHHHHHHHHhC-----CCEEEEEeC
Q 043360 775 GSCLADDKLLLVQSVKEK-----GHVVAFFGG 801 (1108)
Q Consensus 775 ar~sP~~K~~iV~~lq~~-----g~~Va~iGD 801 (1108)
....|.-..++.+.++.+ -+.++||||
T Consensus 113 ~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGD 144 (168)
T PF09419_consen 113 RAKKPGCFREILKYFKCQKVVTSPSEIAVIGD 144 (168)
T ss_pred CCCCCccHHHHHHHHhhccCCCCchhEEEEcc
Confidence 345786667888888765 567999999
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1108 | ||||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 4e-13 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-11 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 8e-11 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 3e-10 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 5e-10 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 7e-08 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 7e-08 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 7e-08 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 3e-07 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 9e-07 |
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1108 | |||
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-55 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-54 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 8e-53 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-52 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-49 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-04 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-04 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-04 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 9e-04 |
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 207 bits (529), Expect = 3e-55
Identities = 152/975 (15%), Positives = 325/975 (33%), Gaps = 150/975 (15%)
Query: 130 SSSTTSYAPVPTSSVEQGLCRNLSTQSRHAIDIPSEIVEEEKSEDRILPDL--LDRIVKA 187
+ + S AP ++++E G + ++ P +E++ D ++ DL D
Sbjct: 2 ADHSASGAPALSTNIESGKFDEKAAEAAAYQPKPKVEDDEDEDIDALIEDLESHDGHDAE 61
Query: 188 RNLNLLKEIGGPEKVASAFGSHLEHGIQGDQLPQPQI---WNTIKPNHAREFFLFLLKAS 244
GG + G+ +++ Q + N +K F FL
Sbjct: 62 EEEEEATPGGGRVVPEDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFL-GFF 120
Query: 245 NNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFV--LLTFPAVTNFRRARKLE 302
++ AA L+ W D I + + ++ F V F+ ++
Sbjct: 121 VGPIQFVMEGAAVLAAGLE--------DWVDFGVICGLLLLNAVVGF--VQEFQAGSIVD 170
Query: 303 KKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDD-- 360
+ + + L+ V+R G + I ++ GD++++ +G +P DG +V D + D
Sbjct: 171 ELK--KTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQS 228
Query: 361 VLNSE---IDPDRNPFLFSGSKVMEGHGTMLLISVG-----GNIASG------------Q 400
L E +D + +F+ S V G +++ + G G A+ +
Sbjct: 229 ALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTE 288
Query: 401 VLR--SNLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQ 458
VL + L + + L+ + +R + +++I F L
Sbjct: 289 VLNGIGTILLILVIFTLLIVWVSSFYRSNP-----------------IVQIL-EFTL--- 327
Query: 459 GKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVIC 518
A+T++ + V G+P V+T ++ L A Q LSA ++ ++C
Sbjct: 328 --------AITIIGVPV--GLPAVVTTTMAV-GAAYLAKKKAIVQKLSAIESLAGVEILC 376
Query: 519 IDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQA-LERGIGASVLVPEISLWPTT 577
D TG L N++ + D+ + A L A ++
Sbjct: 377 SDKTGTLTKNKLSLHDPYTVAGVDPEDL---MLTACLAASRKKKGI----------DAID 423
Query: 578 DWLVSWAKSRSLNVEFVDQNLSVLEH-----RKLSSNNKVCGVLVKINGGDEDKIMHMHW 632
+ K + + + H K +V+ G+ +
Sbjct: 424 KAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVV------AVVESPQGERITCV---- 473
Query: 633 SGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKE 692
G +L + + + ++ + + G R + A + E
Sbjct: 474 KGAPLFVLKTVEEDHPIPEE------VDQAYKNKVAEFATRGFRSLGVARKRGE------ 521
Query: 693 NGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESND 748
+L + R + TV + G+ I +++ D + E + +LG N
Sbjct: 522 GSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNA 581
Query: 749 IALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFG-GSSTRDT 807
L ++ +E +++ K +V+ ++++G++VA G G D
Sbjct: 582 ERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDG--VNDA 639
Query: 808 PALKEADVGITEENKCTEMARECSDIV---------ISAVGSLLPILKLGRCAYCNIQKF 858
P+LK+AD GI E ++ AR +DIV I A+ K R + + +
Sbjct: 640 PSLKKADTGIAVEG-SSDAARSAADIVFLAPGLGAIIDAL-------KTSRQIFHRMYAY 691
Query: 859 TKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNP 918
++ L I L + + + ++++ +I + + + + P
Sbjct: 692 VVYRIALS-IHLEIFLGLWIAILNRSLNIELVVFI-AIFA--DVATLAIAYDNAPYSQTP 747
Query: 919 PARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVF 978
L + + V + V ++ N + F +L + +
Sbjct: 748 VKWNLPKLWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENW 807
Query: 979 NQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFI 1038
F +A P + + I + + + + + +I
Sbjct: 808 LIFIT-----RANGPFWSSIPSWQLSGAIFLVDILATCFTIWGWFEHSDTSIVAVVRIWI 862
Query: 1039 LAVLPWGIHRAVNFI 1053
+ + I V +I
Sbjct: 863 FSFGIFCIMGGVYYI 877
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 205 bits (525), Expect = 2e-54
Identities = 159/1025 (15%), Positives = 332/1025 (32%), Gaps = 248/1025 (24%)
Query: 199 PEKVASAFGSHLEHGIQGDQLPQPQI---WNTIKPNHAREFFLFLLKASNNFNILLLLVA 255
+++ + +G+ L G+ + + N++ P ++ + +LL +
Sbjct: 53 LDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIG 112
Query: 256 AALSFVTGTIEQGPKDG-----WHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKN 310
A L F+ I+ +D + G + V V F + +R ++ +
Sbjct: 113 AILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFK----- 167
Query: 311 KL---EVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLD-------- 359
+ + V+R G + I ++ GD+V + GDR+P D ++++ G +D
Sbjct: 168 NMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGES 227
Query: 360 -----DVLNSEIDP-DRNPFLFSGSKVMEGHGTMLLISVG-----GNIAS---------- 398
S +P + F + +EG +++ G G IA+
Sbjct: 228 EPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRT 287
Query: 399 ---------GQVLRSNLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKI 449
++ + +++ + V +++LI
Sbjct: 288 PIAIEIEHFIHII-TGVAVFLGVSFFILSLIL---------------------------- 318
Query: 450 FERFLLKPQGKISILVSALTVVAIAVQH---GMPFVITVSL----FFWNDKLLINHHAKP 502
S L + + ++ I V + G+ +TV L K + +
Sbjct: 319 ----------GYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTA-----KRMARKNCLV 363
Query: 503 QNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVN-------NDVASEINQAVL 555
+NL A T+G S IC D TG L NR+ V+ + + A + A
Sbjct: 364 KNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATW 423
Query: 556 QALERGIGA----SVLVPEISLWPTTDW----------LVSWAKSRSLNVEFVDQNLSVL 601
AL R I A +V P L+ + +V+ +
Sbjct: 424 SALSR-IAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRD----- 477
Query: 602 EHRKL-----SSNNKVCGVLVKI-NGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFE 655
+ K+ +S NK + + + ++ M G IL+ CS G
Sbjct: 478 RNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVM--KGAPERILDRCSTILL-NGAEEP 534
Query: 656 IKGE-KRRFQKLIKDMEDSGLRPIAFAC-------------GQTEVSEIKENGLHLLALA 701
+K + K FQ ++ G R + F + L + L
Sbjct: 535 LKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLM 594
Query: 702 GL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFR 757
+ R + V R+AG+++I+V+ D + +A +G + I +
Sbjct: 595 AMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLN 654
Query: 758 ELNSTERMAKLDSMTLMGSCLAD------------------------DKLLLVQSVKEKG 793
+ + GS L D KL++V+ + +G
Sbjct: 655 IPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQG 714
Query: 794 HVVAFFGGSST----RDTPALKEADVGITEENKCTEMARECSDIV---------ISAVGS 840
+VA T D+PALK+AD+G+ ++++++ +D++ ++ V
Sbjct: 715 AIVA-----VTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGV-- 767
Query: 841 LLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYML 900
+ GR + N++K LT + LV + P+ ++ ++ + M+
Sbjct: 768 -----EEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMV 822
Query: 901 GGLIMRMEFKDQEPVTNPPAR-RTKSLLDKVMWKHTAVQVLCQVGVFLIFQF-------- 951
+ + E + + + P +T L+++ + Q+ + F +
Sbjct: 823 PAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENG 882
Query: 952 ------------------------AGQVIPGMNRDIRKA----MTFNSFTLCQVFNQFDA 983
GQ R I + F S + Q +
Sbjct: 883 FLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLI-I 941
Query: 984 MRLLKKAVLPVVL--KKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAV 1041
+ + ++ + K + +AA + L W F ++
Sbjct: 942 CKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSL 1001
Query: 1042 LPWGI 1046
+ +
Sbjct: 1002 IIFLY 1006
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 8e-53
Identities = 148/877 (16%), Positives = 290/877 (33%), Gaps = 150/877 (17%)
Query: 230 PNHARE----FFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFV 285
PN E L L N ++ +AA ++ + P D W D I+ + +
Sbjct: 47 PNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPD-WQDFVGIICLLVI 105
Query: 286 --LLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDR 343
++F + + KV+R G+ + L+ GD+V + GD
Sbjct: 106 NSTISF--IEENNAGNAAAALM--AGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDI 161
Query: 344 VPGDGLVVNSDGLMLDD-VLNSEIDP---DRNPFLFSGSKVMEGHGTMLLISVG-----G 394
+P D ++ D L +D L E P +FSGS +G ++I+ G G
Sbjct: 162 IPADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFG 221
Query: 395 NIASG-----------QVLRS---NLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGN 440
A +VL + ++ + + + ++ ++
Sbjct: 222 KAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQRRK------------ 269
Query: 441 VSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHA 500
LL L + I + MP V++V++ + +L A
Sbjct: 270 -----YRDGI-DNLL-----------VLLIGGIPI--AMPTVLSVTMAIGSHRL-SQQGA 309
Query: 501 KPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALER 560
+ ++A M V+C D TG L N++ V K + + + A + A
Sbjct: 310 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAM-ASRV 368
Query: 561 GIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEH------RKLSSNNKVCG 614
+V + + + K ++
Sbjct: 369 ENQD----------AIDAAMVGMLADP----KEARAGIREVHFLPFNPVDKRTA------ 408
Query: 615 VLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSG 674
+ D H G IL + D ++ +I + G
Sbjct: 409 LTYI----DGSGNWHRVSKGAPEQILELAKASND----------LSKKVLSIIDKYAERG 454
Query: 675 LRPIAFACGQ--TEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDE 728
LR +A A + E + L L R + T+ N GV + +++ D+
Sbjct: 455 LRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 514
Query: 729 LLAVTEVACELG-NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQ 787
L E LG + L + L S ++ + K +V+
Sbjct: 515 LAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVK 574
Query: 788 SVKEKGHVVAFFG-GSSTRDTPALKEADVGITEENKCTEMARECSDIV---------ISA 837
++E+ H+V G G D PALK+AD+GI + T+ AR SDIV ISA
Sbjct: 575 KLQERKHIVGMTGDG--VNDAPALKKADIGIAVAD-ATDAARGASDIVLTEPGLSVIISA 631
Query: 838 VGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIM 897
V R + ++ +T ++ + ++ LI E ++ ++ + +I+
Sbjct: 632 V-------LTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEF-DFSAFMVLII-AIL 682
Query: 898 YMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLI-----FQFA 952
G IM + +P P + + K + + Q + V F F
Sbjct: 683 N--DGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLG-GYQAIMTVIFFWAAHKTDFFSD 739
Query: 953 GQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIA-- 1010
+ + + + M + + Q ++ +++ L++ +IA
Sbjct: 740 TFGVRSIRDNNHELMGAVYLQVSIIS-QALIFVT--RSRSWSFVERPGALLMIAFLIAQL 796
Query: 1011 -AQVLVVEFATSLAGYQRLNGMQWGICFILAVLPWGI 1046
A ++ V A + + G+ ++ +++ +
Sbjct: 797 IATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFP 833
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 200 bits (510), Expect = 1e-52
Identities = 163/1029 (15%), Positives = 328/1029 (31%), Gaps = 255/1029 (24%)
Query: 199 PEKVASAFGSHLEHGIQGDQLPQPQI---WNTIKPNHAREFFLFLLKASNNFNILLLLVA 255
++ + + G+ + + N ++P ++ + L+ VA
Sbjct: 58 VAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVA 117
Query: 256 AALSFVTGTIEQGPKDG-----WHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKN 310
AA+ + I+ D + A++ V V F F+ + +
Sbjct: 118 AAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFK----- 172
Query: 311 KL---EVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLD-------- 359
L + V+R G + I L+ GD+V + GDRVP D ++ + G +D
Sbjct: 173 NLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGES 232
Query: 360 -----DVLNSEIDP--DRNPFLFSGSKVMEGHGTMLLISVG-----GNIAS--------- 398
+ P RN F + +EG L+++ G G IAS
Sbjct: 233 EPQTRSPECTHESPLETRN-IAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEK 291
Query: 399 ----------GQVLRSNLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMK 448
++ + L++ +VA+
Sbjct: 292 TPIAIEIEHFVDII-AGLAILFGATFFIVAMCI--------------------------- 323
Query: 449 IFERFLLKPQGKISILVSALTVVAIAVQH---GMPFVITVSL----FFWNDKLLINHHAK 501
+ L + + +AI V + G+ +TV L K L + +
Sbjct: 324 -----------GYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTA-----KRLASKNCV 367
Query: 502 PQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVAS-------EINQAV 554
+NL A T+G SVIC D TG L NR+ VS + D + +
Sbjct: 368 VKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSET 427
Query: 555 LQALERGIGA----SVLVPEISLWPTTDW----------LVSWAKSRSLNVEFVDQNLSV 600
+AL R + + P L+ +++ N +
Sbjct: 428 WRALCR-VLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRE---- 482
Query: 601 LEHRKL-----SSNNKVCGVLVKI-NGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSF 654
K+ +S NK + + + D ++ M G +L CS +G+
Sbjct: 483 -RFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVM--KGAPERVLERCSSIL-IKGQEL 538
Query: 655 EI-KGEKRRFQKLIKDMEDSGLRPIAFAC-------------GQTEVSEIKENGLHLLAL 700
+ + + FQ + G R + F E +GL L
Sbjct: 539 PLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGL 598
Query: 701 AGL----REEIKSTVEALRNAGVRII------------------LVSED----ELLAVTE 734
+ R + V R AG+R+I ++SE E +A
Sbjct: 599 VSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARL 658
Query: 735 VACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA----DDKLLLVQSVK 790
R ++ + G Q ++++ +E + L + A KL++V+S +
Sbjct: 659 RVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHP--EMVFARTSPQQKLVIVESCQ 716
Query: 791 EKGHVVAFFGGSST----RDTPALKEADVGITEENKCTEMARECSDIV---------ISA 837
G +VA T D+PALK+AD+G+ ++ A+ +D++ ++
Sbjct: 717 RLGAIVA-----VTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTG 771
Query: 838 VGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIM 897
V + GR + N++K LT L L+ + P+ I ++++
Sbjct: 772 V-------EQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCT 824
Query: 898 YMLGGLIMRMEFKDQEPVTNPP-ARRTKSLLDKVMWKHT-----AVQVLCQVGVFLIFQF 951
+ + + E + + + P + L+++ + ++ A+Q +
Sbjct: 825 DIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMA 884
Query: 952 AGQVIPGMNRDIRKA-------------------------------MTFNSFTLCQVFNQ 980
P + +R + F S +CQ+ +
Sbjct: 885 QEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADV 944
Query: 981 FDAMRLLKKAVLPVVL---KKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICF 1037
+ + + + + +VF + I + ++ + + W +
Sbjct: 945 L-IRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPM 1003
Query: 1038 ILAVLPWGI 1046
+L +
Sbjct: 1004 PFGLLIFVY 1012
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 1e-49
Identities = 176/1047 (16%), Positives = 359/1047 (34%), Gaps = 248/1047 (23%)
Query: 199 PEKVASAFGSHLEHGIQGDQLPQPQI---WNTIKPNHAREFFLFLLKASNNFNILLLLVA 255
E+ + FG G+ DQ+ + N + + + +++ + + +LL+A
Sbjct: 10 TEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLA 69
Query: 256 AALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNF---RRARK-LE--KKQWEEK 309
A +SFV E+G + +I + ++ A+ R A +E K+ E
Sbjct: 70 ACISFVLAWFEEGEETITAFVEPFVILLILIAN--AIVGVWQERNAENAIEALKEYEPE- 126
Query: 310 NKLEVKVVRSGREQL--IAVSNLLKGDVVRLAKGDRVPGDG--LVVNSDGLMLD------ 359
KV R+ R+ + I +++ GD+V +A GD+VP D L + S L +D
Sbjct: 127 ---MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTG 183
Query: 360 ---------DVLNSEIDP--DRNPFLFSGSKVMEGHGTMLLISVG-----GNIAS----- 398
+ + D+ LFSG+ + G ++ + G G I
Sbjct: 184 ESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243
Query: 399 --------------GQVLRSNLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVG 444
G+ L S ++++ V LI +
Sbjct: 244 EQDKTPLQQKLDEFGEQL----SKVISLICVAVWLINIGHFNDPVHGGSWIR-------- 291
Query: 445 TVMKIFERFLLKPQGKISILVSALTVVAIAVQH---GMPFVITVSLFFWNDKL----LIN 497
+ VA+AV G+P VIT L L +
Sbjct: 292 -----------------GAIYYFKIAVALAVAAIPEGLPAVITTCL-----ALGTRRMAK 329
Query: 498 HHAKPQNLSAGATMGIASVICIDVTGGLVCNR---------------------VDVS--- 533
+A ++L + T+G SVIC D TG L N+ ++
Sbjct: 330 KNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGST 389
Query: 534 -----KFCIGEKDVNNDVASEI----------NQAVLQALERGI----------GA-SVL 567
+ +K + + + N + L E A + L
Sbjct: 390 YAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTL 449
Query: 568 VPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKI 627
V +++++ T +S + + + Q + + S + K V +
Sbjct: 450 VEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAV 509
Query: 628 MHMHWS-GTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKD--MEDSGLRPIAFAC-- 682
+ + G +++ C+Y + K + +IK+ LR +A A
Sbjct: 510 GNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD 569
Query: 683 ----------GQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDE 728
+ E L + + G+ R+E+ +++ R+AG+R+I+++ D
Sbjct: 570 TPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDN 629
Query: 729 LLAVTEVACELGNFRPESN--DIALEGEQFRELNSTERMAKLDSMTLMGSCLA----DDK 782
+ +G F D A G +F +L E+ C A K
Sbjct: 630 KGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRR----ACCFARVEPSHK 685
Query: 783 LLLVQSVKEKGHVVAFFGGSST----RDTPALKEADVGI---TEENKCTEMARECSDIV- 834
+V+ ++ + A T D PALK+A++GI + T +A+ S++V
Sbjct: 686 SKIVEYLQSYDEITA-----MTGDGVNDAPALKKAEIGIAMGSG----TAVAKTASEMVL 736
Query: 835 --------ISAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPIT 886
++AV + GR Y N+++F + ++ ++ +T + +
Sbjct: 737 ADDNFSTIVAAV-------EEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALI 789
Query: 887 SIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQ----VLCQ 942
+QL+WV + L + D + + PP + L+ ++
Sbjct: 790 PVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAAT 849
Query: 943 VGVFLIFQFAGQVIPGMNR------------------------DIRKAMT--FNSFTLCQ 976
VG + + PG+ + + MT + +
Sbjct: 850 VGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIE 909
Query: 977 VFNQFDAMRLLKKAVLPVVLKKFN--VLMVFLIVIAAQVLV--VEFATSLAGYQRLNGMQ 1032
+ N ++ ++++ + N +L + ++ L+ V+ + + L+ Q
Sbjct: 910 MCNALNS-LSENQSLMRMPPWV-NIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQ 967
Query: 1033 WGICFILAVLPWGIHRAVNFIADSFLD 1059
W + +++ G+ + FIA ++L+
Sbjct: 968 WLMVLKISLPVIGLDEILKFIARNYLE 994
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 1e-08
Identities = 105/688 (15%), Positives = 200/688 (29%), Gaps = 182/688 (26%)
Query: 158 HAIDIPSEIVEEEKSEDRILPDLLDRIVKARNLNLLKEIGGPEKVASAFGSH-LEHGIQG 216
H +D E E + IL D V N + K++ + S ++H I
Sbjct: 5 HHMDF--ETGEHQYQYKDILSVFEDAFVD--NFD-CKDV--QDMPKSILSKEEIDHII-- 55
Query: 217 DQLPQPQIWNTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKD-GWHD 275
+ F LL FV + + +
Sbjct: 56 -MSKDAV-------SGTLRLFWTLLSKQEE---------MVQKFVEEVLR---INYKF-- 93
Query: 276 GAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLL-KGD 334
L++ + +R + + + E+ R++L + + K +
Sbjct: 94 ----------LMS--PIKTEQRQPSMMTRMYIEQ-----------RDRLYNDNQVFAKYN 130
Query: 335 VVRLAKGDRV--------PGDGLVVNSDG------LMLDDVLNSEIDPDRNPF-LF--SG 377
V RL ++ P ++++ + LD L+ ++ + F +F +
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ-CKMDFKIFWLNL 189
Query: 378 SKVMEGHGTM-----LLISVGGNIASGQVLRSNLSLAVTVLIALVALIRLL-WRKHSG-- 429
+ LL + N S SN+ L + + A L RLL + +
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA--ELRRLLKSKPYENCL 247
Query: 430 ---DDHELPELKGNVSVGTVMKIFE---RFLL--KPQGKISILVSALTVVAIAVQHGMPF 481
+ V F + LL + + L +A T H M
Sbjct: 248 LVLLN---------VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298
Query: 482 VI--TVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGE 539
SL K L +PQ+L + I + + +
Sbjct: 299 TPDEVKSLLL---KYL---DCRPQDLPREVLTTNPRRLSI--IAESIRDGLATWDNW--- 347
Query: 540 KDVNNDVASEINQAVLQALE----R------GI-GASVLVPEISLWPTTDWLVSWAKSRS 588
K VN D + I ++ L LE R + S +P I L + W
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL------SLIWFDVIK 401
Query: 589 LNVEFVDQNL---SVLEHRKLSSNNKVCGVLVKING-GDEDKIMH----------MHWSG 634
+V V L S++E + S + + +++ + + +H +
Sbjct: 402 SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461
Query: 635 TASTILNMCSYYYDSEG---KSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIK 691
+ Y+Y G K+ E F+ + D R + +I+
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD-----FRFLE--------QKIR 508
Query: 692 ENGLHLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF--RPESN-- 747
+ A I +T++ L+ I D + + +F + E N
Sbjct: 509 HDSTAWNASGS----ILNTLQQLKFYKPYIC----DNDPKYERLVNAILDFLPKIEENLI 560
Query: 748 -----DI---ALEGEQFRELNSTERMAK 767
D+ AL E + +
Sbjct: 561 CSKYTDLLRIALMAEDEAIFEEAHKQVQ 588
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 2e-07
Identities = 91/694 (13%), Positives = 200/694 (28%), Gaps = 197/694 (28%)
Query: 497 NHHAKPQNLSAGATM----GIASVICIDVTGGLVCNRV-DVSKFCIGEKDVNNDVAS--E 549
+HH + G I SV C V D+ K + ++++++ + S
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDA 60
Query: 550 INQA------VLQALERGIGASVLVPEISLWPTTDWLVS-WA---KSRSLN-VEFVDQNL 598
++ +L E + V E L +L+S + S+ +++Q
Sbjct: 61 VSGTLRLFWTLLSKQEEMVQKFV---EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQ-- 115
Query: 599 SVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKG 658
+L ++N+V K N + + +L + K+ I G
Sbjct: 116 ----RDRLYNDNQV---FAKYNVSRLQPYLKLR-----QALLEL------RPAKNVLIDG 157
Query: 659 EKRRFQKLIKDMEDSG---LRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALR 715
+ SG + C +V + + L L ++ +E L+
Sbjct: 158 -----------VLGSGKTWV--ALDVCLSYKVQCKMDFKIFWLNL-KNCNSPETVLEMLQ 203
Query: 716 NAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 775
+I + + ++ + N + + I + R L ++
Sbjct: 204 KLLYQI----DPNWTSRSDHSS---NIKLRIHSIQ---AELRRLLKSKPYEN-------- 245
Query: 776 SCLA--DDKLLLVQSVKEKGHVVAFFGGS----STRDT-------------PALKEADVG 816
CL + V+ AF +TR +L +
Sbjct: 246 -CLLVLLN-------VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 817 ITEEN------KCTEM--------ARECSDIVISAVGSLLPILKLGRCAYCNIQKFTKLQ 862
+T + K + + +S + ++ G + N + +
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES---IRDGLATWDNWKHVNCDK 354
Query: 863 LTGCASGLLITLVTTL---------ILEES---PITSIQLIWVYSIMYMLGGLIMRMEFK 910
LT L L + S P + LIW +
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD------------VIKS 402
Query: 911 DQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNR------DIR 964
D V N + SL++K K + + + ++L + + ++R +I
Sbjct: 403 DVMVVVNKLHK--YSLVEK-QPKESTISIP---SIYLELKVKLENEYALHRSIVDHYNIP 456
Query: 965 KAMTFNSFTLCQVFNQF---------DAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLV 1015
K + + F + + + +V F F + ++
Sbjct: 457 KTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR----F---LEQKI-- 507
Query: 1016 VEFATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADS--FLDRSLSGILRLEFSRR 1073
R + W + + +I D+ +R ++ I L+F +
Sbjct: 508 -----------RHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI--LDFLPK 554
Query: 1074 QQHRPYVSFLSIPFSMFLYISISHYYNPDNSFTF 1107
+ S ++ L I++ ++ F
Sbjct: 555 IEENLICS----KYTDLLRIALMA----EDEAIF 580
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 5e-06
Identities = 67/456 (14%), Positives = 141/456 (30%), Gaps = 136/456 (29%)
Query: 111 VVSKACNSFSRRSFKDQGASSSTTSYAPVPTSSVE--QGLCRNL----STQSRHAIDIPS 164
V C S+ + D P + +E Q L + +++S H+ +I
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225
Query: 165 EIVEEEKSEDR-------------ILPDLLD-RIVKA-----------RNLNLLKEIGG- 198
I ++E R +L ++ + + A R + +
Sbjct: 226 RI-HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAA 284
Query: 199 ---------------PEKVASAFGSHLEHGIQGDQLPQ------PQ----IWNTIKPNHA 233
P++V S +L+ Q LP+ P+ I +I+ A
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ--DLPREVLTTNPRRLSIIAESIRDGLA 342
Query: 234 R-EFFLFLLKASNNFNILLLLVAAALSFVTGTIEQG--------PKDGWHDGAAILIAVF 284
+ + + N + L ++ ++L+ + + P I +
Sbjct: 343 TWDNWKHV-----NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH-----IPTILL 392
Query: 285 VLL-------TFPAVTNFRRARKLEKKQWEE----------KNKLEVKVVRSGREQLIAV 327
L+ V N L +KQ +E + K++++ + ++
Sbjct: 393 SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH 452
Query: 328 SNLLKGDVVRLAKGDRVP--GDGLVVNSDGLMLDDVLNSE-IDPDRNPFL---FSGSKVM 381
N+ K D +P D + G L ++ + E + R FL F K+
Sbjct: 453 YNIPKT----FDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIR 508
Query: 382 EGHGTMLLISVGGNIASGQVLRSNLSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNV 441
H + + G + + Q L+ ++ + D+ E
Sbjct: 509 --HDSTAWNASGSILNTLQQLK-------------------FYKPYICDNDPKYERL--- 544
Query: 442 SVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQH 477
V ++ FL K + + I ++ IA+
Sbjct: 545 -VNAILD----FLPKIEENL-ICSKYTDLLRIALMA 574
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 6e-05
Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 43/245 (17%)
Query: 893 VYSIMYMLGGLIMRMEFKD--QEPVTNPPARRTKSLLDKVMWKHT-AVQVLCQVGV---- 945
+ M ++ + E T L ++ K VQ + +
Sbjct: 35 CKDVQDMPKSILSKEEIDHIIMSK---DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINY 91
Query: 946 -FLIFQFAGQVI-PGMNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLM 1003
FL+ + P M + + QVF +++ RL L L +
Sbjct: 92 KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP-A 150
Query: 1004 VFLIV-----IAAQVLVVEFATSLAGYQRL-NGMQW---GICF----ILAVLPWGIHRAV 1050
+++ + ++ S ++ + W C +L +L + +
Sbjct: 151 KNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEML-QKLLYQI 209
Query: 1051 NFIADSFLDRSLSGILRLE-----FSRRQQHRPYVSFLSIPFSMFLYISISHYYNPD--N 1103
+ S D S + LR+ R + +PY + L + + + N N
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV---------LLNVQNAKAWN 260
Query: 1104 SFTFR 1108
+F
Sbjct: 261 AFNLS 265
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 7e-04
Identities = 55/360 (15%), Positives = 113/360 (31%), Gaps = 90/360 (25%)
Query: 18 LGAGLLVTASATTTATTTSSTSPSHKYARLWRRSITVGIIVSL--KKTTCFPGQDLLPSP 75
L +L+T S+ + +H ++T + SL K C P QDL
Sbjct: 264 LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP-QDLPREV 322
Query: 76 TSSSPLLVNQENDSDSLQQEPSNTDSAVPENGFINVVSKACNSFSRRSFKDQGASSSTTS 135
+++P ++ ++S++ + D + +V + S +
Sbjct: 323 LTTNPRRLSII--AESIRDGLATWD------NWKHVNCDKLTTIIESSLNVLEPAEYRKM 374
Query: 136 Y---------APVPTSSVEQGLCR---NLSTQSRHAIDIPSEIVEE--EKS-------ED 174
+ A +P L ++ +V + + S E
Sbjct: 375 FDRLSVFPPSAHIP----TILLSLIWFDVIKS------DVMVVVNKLHKYSLVEKQPKES 424
Query: 175 RI-LPDL-LDRIVKARNLNLLKEIGGPEKVASAFGSH---LEHGIQGDQLPQPQIWNTIK 229
I +P + L+ VK N L H ++H +P+ + +
Sbjct: 425 TISIPSIYLELKVKLENEYAL---------------HRSIVDH----YNIPKTFDSDDLI 465
Query: 230 PNHARE-FFLFL---LKASNN------FNILLLLVAAALSFVTGTIEQGPKDGWHDGAAI 279
P + + F+ + LK + F ++ L F+ I HD A
Sbjct: 466 PPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL----DFRFLEQKIR-------HDSTAW 514
Query: 280 LIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLA 339
+ +L T + ++ ++E + + E LI D++R+A
Sbjct: 515 NASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYT---DLLRIA 571
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 1e-04
Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 44/167 (26%)
Query: 697 LLALA-GLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQ 755
++ R +K +E L+N G++II++S D+ V E++ EL
Sbjct: 130 SFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN--------------- 174
Query: 756 FRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFG-GSSTRDTPALKEAD 814
+ + +DK+ +++ +K+ G+ V G G D AL AD
Sbjct: 175 ------------IQ--EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDG--VNDAAALALAD 218
Query: 815 VGI---TEENKCTEMARECSDIVISAVGSLLPI---LKLGRCAYCNI 855
V + ++++ +DI++ + + +K + I
Sbjct: 219 VSVAMGNG----VDISKNVADIIL-VSNDIGTLLGLIKNRKRLSNAI 260
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 2e-04
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 313 EVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVV 351
V+R G+E + V + GD+V + G+++P DG+VV
Sbjct: 13 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV 51
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 9e-04
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 40/129 (31%)
Query: 696 HLLALAGLREEIKST----VEALRNAGVRIILVSEDELLAVTEVACELG--NFRPESNDI 749
+AL + + IKS+ + L+ +G+ I++++ D VA LG E
Sbjct: 544 KTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAE---- 599
Query: 750 ALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFG-GSSTRDTP 808
+ +DK +V +K+KG +VA G G D P
Sbjct: 600 ---------------------------IMPEDKSRIVSELKDKGLIVAMAGDG--VNDAP 630
Query: 809 ALKEADVGI 817
AL +AD+GI
Sbjct: 631 ALAKADIGI 639
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1108 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.91 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.92 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.89 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.88 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.85 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.81 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.78 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.32 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.04 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.02 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.96 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.96 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.91 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.9 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.83 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.81 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.77 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.68 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.53 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.5 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.47 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.47 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.45 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.43 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.41 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.4 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.39 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.37 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.34 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.29 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.28 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.25 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.24 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.23 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.23 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.2 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.18 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.17 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.13 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.12 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.1 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.09 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.09 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.09 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.0 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.99 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 97.98 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.95 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.93 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.93 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.91 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.9 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.86 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.85 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.84 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.84 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.83 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.82 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.81 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.81 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.8 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.79 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.79 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.78 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.78 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.77 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.75 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.73 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.73 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.72 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.71 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.71 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.7 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.7 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.68 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.67 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.6 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.57 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.56 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.56 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.56 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.55 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.5 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.44 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.44 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.43 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.42 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.39 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.38 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.37 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.36 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.35 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.32 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.26 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.26 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.25 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.23 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.22 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.2 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.11 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.11 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.06 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.03 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 96.99 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.87 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.84 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.72 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.71 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.65 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.58 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.53 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.47 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.47 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.38 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.37 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.11 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 95.74 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.67 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 95.64 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.53 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.37 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 95.33 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 95.19 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 95.18 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 94.97 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 94.88 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.85 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 94.68 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 94.37 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.24 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 93.85 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 93.15 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 92.43 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 92.29 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 91.92 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 91.53 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 90.79 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 90.05 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 89.94 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 84.7 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 83.66 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 81.53 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-126 Score=1227.19 Aligned_cols=827 Identities=17% Similarity=0.238 Sum_probs=710.7
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhcccccc-----
Q 043360 195 EIGGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIE----- 266 (1108)
Q Consensus 195 ~~gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~----- 266 (1108)
+.-+++++++.|+||+++|||++|+++|+++ |++++++.+++|+.+++||+++++++++++++++++.+...
T Consensus 54 ~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~ 133 (1034)
T 3ixz_A 54 HQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGD 133 (1034)
T ss_pred hhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCC
Confidence 4568999999999999999999999999999 99999999999999999999999999999999987764211
Q ss_pred CCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCc
Q 043360 267 QGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPG 346 (1108)
Q Consensus 267 ~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPa 346 (1108)
......|+++++|++++++..+++.++++++++.+++++ +..+.+++|+|||++++|+++||||||||.|++||+|||
T Consensus 134 ~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~--~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPA 211 (1034)
T 3ixz_A 134 LTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFK--NLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPA 211 (1034)
T ss_pred CccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHh--ccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecC
Confidence 111235788999988889999999999999999999998 777889999999999999999999999999999999999
Q ss_pred ceEEEecCceeeeec-ccCCCCC-------------CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH-------
Q 043360 347 DGLVVNSDGLMLDDV-LNSEIDP-------------DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN------- 405 (1108)
Q Consensus 347 Dgill~g~~l~VdeS-LTGES~p-------------~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~------- 405 (1108)
||+|++++++.|||| |||||.| +.+|++|+||.+.+|.++++|++||.+|.+|++.+.+
T Consensus 212 D~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~ 291 (1034)
T 3ixz_A 212 DIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEK 291 (1034)
T ss_pred CeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCC
Confidence 999999999999999 9999999 2357899999999999999999999999999998776
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhc
Q 043360 406 ---------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQ 476 (1108)
Q Consensus 406 ---------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP 476 (1108)
++..+..+++++.++.++.... ....+...+..++++++++||
T Consensus 292 tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~i~l~v~~iP 343 (1034)
T 3ixz_A 292 TPIAIEIEHFVDIIAGLAILFGATFFIVAMC----------------------------IGYTFLRAMVFFMAIVVAYVP 343 (1034)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------hcchHHHHHHHHHHHHHheec
Confidence 2222221111111111111111 011567889999999999999
Q ss_pred CchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcc--------h
Q 043360 477 HGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVA--------S 548 (1108)
Q Consensus 477 ~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--------~ 548 (1108)
||||+++|+++++++++| +++|++||+++++|+||++++||||||||||+|+|+|.++++++..+..... .
T Consensus 344 e~Lp~~vti~la~~~~rm-ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 422 (1034)
T 3ixz_A 344 EGLLATVTVCLSLTAKRL-ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFD 422 (1034)
T ss_pred cccHHHHHHHHHHHHHHH-hhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccC
Confidence 999999999999999999 9999999999999999999999999999999999999999998765432210 1
Q ss_pred hhhHHHHHHHHHHhccccc------------ccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEE
Q 043360 549 EINQAVLQALERGIGASVL------------VPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVL 616 (1108)
Q Consensus 549 ~~~~~~~~~l~~~~~~~~~------------~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsvi 616 (1108)
..++....++..+.+||.. .....|||+|.|+++++.+.+.+....++++++++++||+|+||+|+++
T Consensus 423 ~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v 502 (1034)
T 3ixz_A 423 QSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSI 502 (1034)
T ss_pred cCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEE
Confidence 1122333444444445432 1235789999999999999888888888999999999999999999988
Q ss_pred EEEcC--CCcceeEEEEEeccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCcc------
Q 043360 617 VKING--GDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEV------ 687 (1108)
Q Consensus 617 v~~~~--~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~------ 687 (1108)
++..+ +++ +++|+|||||.|+++|+.+.. +|+..++ ++.++.+.+.+++|+.+|+|||++|||.++.
T Consensus 503 ~~~~~~~~~~---~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~ 578 (1034)
T 3ixz_A 503 HTLEDPRDPR---HVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPG 578 (1034)
T ss_pred EEecCCCCcc---EEEEEeCChHHHHHHhHHhhc-CCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccc
Confidence 87643 122 889999999999999998775 6778889 8889999999999999999999999998751
Q ss_pred -------hhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCC-----------
Q 043360 688 -------SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE----------- 745 (1108)
Q Consensus 688 -------~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~----------- 745 (1108)
.+..|+||+|+|++++ |++++++|++|+++||+|+|+|||+..||.+||++|||..++
T Consensus 579 ~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~ 658 (1034)
T 3ixz_A 579 YAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARL 658 (1034)
T ss_pred cccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhh
Confidence 1235899999999999 999999999999999999999999999999999999997531
Q ss_pred -----------CCccccchhhhhhcCHHHHHHHhcccc--eecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhh
Q 043360 746 -----------SNDIALEGEQFRELNSTERMAKLDSMT--LMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKE 812 (1108)
Q Consensus 746 -----------~~~~vi~G~~l~~l~~~~~~~~~~~~~--V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~ 812 (1108)
....+++|.++..+.++++.+.+.++. +|||++|+||.++|+.+|+.|++|+|+|| |.||+|||++
T Consensus 659 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GD-G~ND~~mLk~ 737 (1034)
T 3ixz_A 659 RVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGD-GVNDSPALKK 737 (1034)
T ss_pred CccchhccccccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECC-cHHhHHHHHH
Confidence 123588999999999999999888775 99999999999999999999999999999 9999999999
Q ss_pred CCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHH
Q 043360 813 ADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQL 890 (1108)
Q Consensus 813 AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~ql 890 (1108)
||||||||++|+|+||++||+|+. +|.+|..+++|||++|+|++|+++|.+++|+..+++.+++.++..+.|++++|+
T Consensus 738 A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qi 817 (1034)
T 3ixz_A 738 ADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITI 817 (1034)
T ss_pred CCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 999999999999999999999999 999999999999999999999999999999999999999999888999999999
Q ss_pred HHHHHHHhHHHHHhhhcccCCCCCCcCCCCCC-CCCcccHHHHHHHHH-HHHHHHHHHHHHHHhhhcC--------CCCC
Q 043360 891 IWVYSIMYMLGGLIMRMEFKDQEPVTNPPARR-TKSLLDKVMWKHTAV-QVLCQVGVFLIFQFAGQVI--------PGMN 960 (1108)
Q Consensus 891 l~~nli~~~l~~l~la~e~~~~~l~~~~P~~~-~~~lis~~~~~~i~~-~~~~~~~v~~~~~~~~~~~--------~~~~ 960 (1108)
||+|+++|.+|+++|++|+|++++|+|||+++ +++++++.+++..++ .++++++..++.+|..... ++..
T Consensus 818 L~inl~~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 897 (1034)
T 3ixz_A 818 LFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLR 897 (1034)
T ss_pred HHHHHHHHHHHHHHhhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccc
Confidence 99999999999999999999999999999987 689999998776544 4777776666555432110 0100
Q ss_pred ---------------------------ccccchhhhHHHHHHHHHHHhhhhhcccccccc-cccchhHHHHHHHHHHHHH
Q 043360 961 ---------------------------RDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLP-VVLKKFNVLMVFLIVIAAQ 1012 (1108)
Q Consensus 961 ---------------------------~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~-~~~~n~~~~~~i~~~~~~~ 1012 (1108)
....+|++|++++++|+++.+++|+. +.++|+ ++++|++++++++++++++
T Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~-~~s~~~~~~~~N~~l~~~~~~~~~l~ 976 (1034)
T 3ixz_A 898 PQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTR-RLSAFQQGFFRNRILVIAIVFQVCIG 976 (1034)
T ss_pred cccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccC-CCcccccCCcccHHHHHHHHHHHHHH
Confidence 01267999999999999999999984 456776 7899999999999999998
Q ss_pred HHHHH--HhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043360 1013 VLVVE--FATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSFL 1058 (1108)
Q Consensus 1013 ~~~v~--~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~~ 1058 (1108)
+++++ +++.+|++.|+++.+|+++++++++.+++.++.|++.|++-
T Consensus 977 ~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1024 (1034)
T 3ixz_A 977 CFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCP 1024 (1034)
T ss_pred HHHHHhhhHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 87654 57899999999999999999999999999999999887653
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-125 Score=1222.46 Aligned_cols=826 Identities=16% Similarity=0.224 Sum_probs=706.0
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhcccccc----C
Q 043360 195 EIGGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIE----Q 267 (1108)
Q Consensus 195 ~~gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~----~ 267 (1108)
+..+++++++.|++++++||+++|+++|+++ |++++++.+++|+.+++||+++++++|+++++++++.+... .
T Consensus 49 ~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~ 128 (1028)
T 2zxe_A 49 HKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATED 128 (1028)
T ss_dssp SSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred hhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhccccc
Confidence 3467899999999999999999999999999 99999999999999999999999999999999998775322 1
Q ss_pred -CCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCc
Q 043360 268 -GPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPG 346 (1108)
Q Consensus 268 -~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPa 346 (1108)
.....|++++++++++++..+++.+++++.++.+++|. +..+.+++|+|||++++|+++||||||||.|++||+|||
T Consensus 129 ~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~--~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPa 206 (1028)
T 2zxe_A 129 EPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFK--NMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPA 206 (1028)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHH--TTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeec
Confidence 11124788888888888888999999999999999998 778899999999999999999999999999999999999
Q ss_pred ceEEEecCceeeeec-ccCCCCC---C----------CCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH-------
Q 043360 347 DGLVVNSDGLMLDDV-LNSEIDP---D----------RNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN------- 405 (1108)
Q Consensus 347 Dgill~g~~l~VdeS-LTGES~p---~----------~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~------- 405 (1108)
||+|++|++|.|||| |||||.| . ..|++|+||.+.+|.++++|++||.+|.+|++++.+
T Consensus 207 D~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 286 (1028)
T 2zxe_A 207 DLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGR 286 (1028)
T ss_dssp EEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCC
T ss_pred eEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCC
Confidence 999999988999999 9999999 1 235799999999999999999999999999999877
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhc
Q 043360 406 ---------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQ 476 (1108)
Q Consensus 406 ---------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP 476 (1108)
+..++..+.+++.++.++...+. ..++...+.+++++++++||
T Consensus 287 t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~----------------------------~~~~~~~~~~~i~llv~~iP 338 (1028)
T 2zxe_A 287 TPIAIEIEHFIHIITGVAVFLGVSFFILSLIL----------------------------GYSWLEAVIFLIGIIVANVP 338 (1028)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------------------------TCCHHHHHHHHHHHHHHHSC
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------------------------cCcHHHHHHHHHHHHHHHcC
Confidence 22222222222222222221110 01456778888999999999
Q ss_pred CchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcc--------h
Q 043360 477 HGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVA--------S 548 (1108)
Q Consensus 477 ~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--------~ 548 (1108)
||||+++++++++++++| +++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..... .
T Consensus 339 ~~Lp~~vti~l~~~~~~m-ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 417 (1028)
T 2zxe_A 339 EGLLATVTVCLTLTAKRM-ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFD 417 (1028)
T ss_dssp TTHHHHHHHHHHHHHHHH-HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCC
T ss_pred chHHHHHHHHHHHHHHHH-hhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccc
Confidence 999999999999999999 9999999999999999999999999999999999999999987654322110 0
Q ss_pred hhhHHHHHHHHHHhccccc------------ccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEE
Q 043360 549 EINQAVLQALERGIGASVL------------VPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVL 616 (1108)
Q Consensus 549 ~~~~~~~~~l~~~~~~~~~------------~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsvi 616 (1108)
..++....++..+.+||.. ..+..|||+|.||++++++.+.+....++.+++++++||+|+||||+++
T Consensus 418 ~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi 497 (1028)
T 2zxe_A 418 KTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSI 497 (1028)
T ss_dssp SSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEE
T ss_pred cCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEE
Confidence 0122333444444445432 1134789999999999998766777777889999999999999999999
Q ss_pred EEEcC--CCcceeEEEEEeccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCcch-----
Q 043360 617 VKING--GDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVS----- 688 (1108)
Q Consensus 617 v~~~~--~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~----- 688 (1108)
++..+ +++ +++|+|||||.|+++|+++. .+|+..++ ++.++.+.+.+++|+++|+|||++|||+++..
T Consensus 498 ~~~~~~~~~~---~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~ 573 (1028)
T 2zxe_A 498 HENEKSSESR---YLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEG 573 (1028)
T ss_dssp EECSCTTTCC---EEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTT
T ss_pred EeccCCCCCc---EEEEEeCCcHHHHHHhhhhh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc
Confidence 98642 222 88999999999999999864 47888889 88889999999999999999999999987521
Q ss_pred --------hhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCC----------
Q 043360 689 --------EIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES---------- 746 (1108)
Q Consensus 689 --------~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~---------- 746 (1108)
+..|+|++|+|++++ ||+++++|++|+++||+|+|+|||+..||.+||++|||..++.
T Consensus 574 ~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~ 653 (1028)
T 2zxe_A 574 YPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARL 653 (1028)
T ss_dssp CCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHT
T ss_pred cccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhc
Confidence 234789999999999 9999999999999999999999999999999999999985321
Q ss_pred ------------CccccchhhhhhcCHHHHHHHhcccc--eecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhh
Q 043360 747 ------------NDIALEGEQFRELNSTERMAKLDSMT--LMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKE 812 (1108)
Q Consensus 747 ------------~~~vi~G~~l~~l~~~~~~~~~~~~~--V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~ 812 (1108)
...+++|++++.+.++++.+++.++. +|||++|+||.++|+.+|+.|++|+|+|| |.||+||||+
T Consensus 654 ~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGD-G~ND~paLk~ 732 (1028)
T 2zxe_A 654 NIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGD-GVNDSPALKK 732 (1028)
T ss_dssp TCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEC-SGGGHHHHHH
T ss_pred CcchhhccccccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcC-CcchHHHHHh
Confidence 13588999999999999999998886 99999999999999999999999999999 9999999999
Q ss_pred CCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHH
Q 043360 813 ADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQL 890 (1108)
Q Consensus 813 AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~ql 890 (1108)
||||||||++|+|+||++||+++. +|++|++++++||++|+|+++++.|.+++|+..++..+++.++..+.|++++|+
T Consensus 733 AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qi 812 (1028)
T 2zxe_A 733 ADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTI 812 (1028)
T ss_dssp SSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHH
T ss_pred CCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHH
Confidence 999999998899999999999998 799999999999999999999999999999999999988888888999999999
Q ss_pred HHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCC-CcccHHHHHH-HHHHHHHHHHHHHHHHHhhhc-------------
Q 043360 891 IWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTK-SLLDKVMWKH-TAVQVLCQVGVFLIFQFAGQV------------- 955 (1108)
Q Consensus 891 l~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~-~lis~~~~~~-i~~~~~~~~~v~~~~~~~~~~------------- 955 (1108)
+|+|+++|.+|++++++|+|++++|++||+.++. +++++++++. ++..|++++++.|+.+++...
T Consensus 813 l~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 892 (1028)
T 2zxe_A 813 LCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKR 892 (1028)
T ss_dssp HHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCH
T ss_pred HHHHHHHHHHHHHHhccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhccc
Confidence 9999999999999999999999999999998666 9999998876 456688888777665543211
Q ss_pred --CCCC--C-------c-----------cccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHH
Q 043360 956 --IPGM--N-------R-----------DIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQV 1013 (1108)
Q Consensus 956 --~~~~--~-------~-----------~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~ 1013 (1108)
++.. + . ..++|++|++++++|++|.+++|+. ..++|+..++|+++++++++++++++
T Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~n~~l~~~~~~~~~l~~ 971 (1028)
T 2zxe_A 893 VRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTR-RNSIFQQGMKNKILIFGLFEETALAA 971 (1028)
T ss_dssp HHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS-SSCHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred chhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccC-CcchhccCCcCHHHHHHHHHHHHHHH
Confidence 1110 0 0 1468999999999999999999984 45677755899999999999999998
Q ss_pred HHHH--HhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043360 1014 LVVE--FATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSF 1057 (1108)
Q Consensus 1014 ~~v~--~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~ 1057 (1108)
++++ +++.+|++.|+++.+|+++++++++.+++.++.|++.|++
T Consensus 972 ~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 972 FLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp HHHHSTTHHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhhhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 8876 4689999999999999999999999999999999886654
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-123 Score=1202.71 Aligned_cols=834 Identities=19% Similarity=0.273 Sum_probs=702.7
Q ss_pred hCCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCC--CC
Q 043360 196 IGGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQG--PK 270 (1108)
Q Consensus 196 ~gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~--~~ 270 (1108)
..+++++++.|++|.++||+++|+++|+++ |++++++++++|+.+++||+++++++|++++++++++++...+ +.
T Consensus 7 ~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~ 86 (995)
T 3ar4_A 7 SKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETI 86 (995)
T ss_dssp GSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGG
T ss_pred hCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 357899999999999999999999999999 9999998999999999999999999999999999998875532 22
Q ss_pred CCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCE--EEEEEccccccCcEEEEcCCCccCcce
Q 043360 271 DGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGR--EQLIAVSNLLKGDVVRLAKGDRVPGDG 348 (1108)
Q Consensus 271 ~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~--~~~I~~~dLvvGDIV~l~~Gd~IPaDg 348 (1108)
..|++++++++++++..+++.+++++.++.+++|. +..+.+++|+|||+ .++|+++||||||||.|++||+|||||
T Consensus 87 ~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~--~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~ 164 (995)
T 3ar4_A 87 TAFVEPFVILLILIANAIVGVWQERNAENAIEALK--EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADI 164 (995)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHG--GGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEE
T ss_pred hhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHH--ccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccE
Confidence 36899999999888888999999999999999998 77888999999988 799999999999999999999999999
Q ss_pred EEEe--cCceeeeec-ccCCCCC---CC-------------CCeeeecceEeeceEEEEEEEeccccHHHHHHHHH----
Q 043360 349 LVVN--SDGLMLDDV-LNSEIDP---DR-------------NPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN---- 405 (1108)
Q Consensus 349 ill~--g~~l~VdeS-LTGES~p---~~-------------~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~---- 405 (1108)
+|++ +.+|+|||| |||||.| .. +|++|+||.+.+|.++++|++||.+|++|++.+.+
T Consensus 165 ~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 244 (995)
T 3ar4_A 165 RILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATE 244 (995)
T ss_dssp EEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTCC
T ss_pred EEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcCC
Confidence 9964 556899999 9999999 22 37999999999999999999999999999998877
Q ss_pred ------------HHHHHHHHHHHHHHHHHHHhc--cCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHH
Q 043360 406 ------------LSLAVTVLIALVALIRLLWRK--HSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVV 471 (1108)
Q Consensus 406 ------------~~~~~~~l~~i~l~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~il 471 (1108)
++..+..+++++.++.++... .. .......|. ..+...|..+++++
T Consensus 245 ~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------------~~~~~~~~~ai~l~ 304 (995)
T 3ar4_A 245 QDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN-DPVHGGSWI-------------------RGAIYYFKIAVALA 304 (995)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGG-SCSSSSCHH-------------------HHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccchHH-------------------HHHHHHHHHHHHHH
Confidence 222222222222222222111 00 000000110 13445678899999
Q ss_pred HHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccC--------
Q 043360 472 AIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVN-------- 543 (1108)
Q Consensus 472 v~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~-------- 543 (1108)
+++|||+||++++++++.++++| +++|++||+++++|+||++++||||||||||+|+|+|++++..+..++
T Consensus 305 v~aiP~~Lp~~vt~~la~~~~~m-a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 383 (995)
T 3ar4_A 305 VAAIPEGLPAVITTCLALGTRRM-AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEF 383 (995)
T ss_dssp HHHSCTTHHHHHHHHHHHHHHHH-HHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEE
T ss_pred HHhcCcchHHHHHHHHHHHHHHh-ccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCccccccee
Confidence 99999999999999999999999 999999999999999999999999999999999999999987532111
Q ss_pred --------CCcc---------hhhhHHHHHHHHHHhcccccc---------cccCCChhHHHHHHHHHHcCC-Ch--h--
Q 043360 544 --------NDVA---------SEINQAVLQALERGIGASVLV---------PEISLWPTTDWLVSWAKSRSL-NV--E-- 592 (1108)
Q Consensus 544 --------~~~~---------~~~~~~~~~~l~~~~~~~~~~---------~~~~g~p~e~ALl~~a~~~g~-~~--~-- 592 (1108)
+... ...++.+.+++..+.+||... .+..|||+|.||++++++.|. +. .
T Consensus 384 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i 463 (995)
T 3ar4_A 384 SITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNL 463 (995)
T ss_dssp EECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTS
T ss_pred eccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCcccccccc
Confidence 0000 011233444444444455331 123589999999999998776 21 1
Q ss_pred -----------hhcccceeeeeecCCCCCCeEEEEEEEcCCC----cceeEEEEEeccHHHHHhhcccccccCCccccc-
Q 043360 593 -----------FVDQNLSVLEHRKLSSNNKVCGVLVKINGGD----EDKIMHMHWSGTASTILNMCSYYYDSEGKSFEI- 656 (1108)
Q Consensus 593 -----------~~~~~~~il~~~~F~s~rkrmsviv~~~~~~----~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l- 656 (1108)
..++.|++++++||+|+||||||+++.++|. + +++|+|||||.|+++|+++.. +++..++
T Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~---~~~~~KGa~e~il~~c~~~~~-~~~~~~l~ 539 (995)
T 3ar4_A 464 SKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVG---NKMFVKGAPEGVIDRCNYVRV-GTTRVPMT 539 (995)
T ss_dssp CTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCC---CEEEEEECHHHHHHTEEEEEE-TTEEEECC
T ss_pred ccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccc---eEEEEcCCHHHHHHhcchhhc-CCCcccCC
Confidence 1345789999999999999999999986651 2 689999999999999998765 3456778
Q ss_pred hhhHHHHHHHHHHH--HhCCCeEEEEEEecCcc------------hhhhccCceeeEEEec----ccchHHHHHHHHHcC
Q 043360 657 KGEKRRFQKLIKDM--EDSGLRPIAFACGQTEV------------SEIKENGLHLLALAGL----REEIKSTVEALRNAG 718 (1108)
Q Consensus 657 ~~~~~~~~~~i~~~--a~~GlR~L~~A~k~l~~------------~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aG 718 (1108)
++.++++.+.+++| +++|+|||++|||+++. ++.+|+|++|+|++++ |||++++|+.|+++|
T Consensus 540 ~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~G 619 (995)
T 3ar4_A 540 GPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAG 619 (995)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcC
Confidence 78889999999999 99999999999998741 3456899999999999 999999999999999
Q ss_pred CEEEEecCCcHHHHHHHHHHcCCCCCCC--CccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEE
Q 043360 719 VRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVV 796 (1108)
Q Consensus 719 I~v~mlTGD~~~tA~~IA~~~GI~~~~~--~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~V 796 (1108)
|+|+|+|||+..||.+||++|||...+. ...+++|++++.+.++++.+++.+..+|||++|+||.++|+.+|++|++|
T Consensus 620 i~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v 699 (995)
T 3ar4_A 620 IRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEIT 699 (995)
T ss_dssp CEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCE
T ss_pred CEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEE
Confidence 9999999999999999999999986422 25789999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHH
Q 043360 797 AFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITL 874 (1108)
Q Consensus 797 a~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~ 874 (1108)
+|+|| |+||+||||+|||||||| +|+++||++||+++. +|..|+++++|||++|+|+++++.|++++|+..++..+
T Consensus 700 ~~~GD-G~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~ 777 (995)
T 3ar4_A 700 AMTGD-GVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIF 777 (995)
T ss_dssp EEEEC-SGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcC-CchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 999999999999999999 999999999999998 89999999999999999999999999999999998888
Q ss_pred HHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHh-h
Q 043360 875 VTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFA-G 953 (1108)
Q Consensus 875 ~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~~-~ 953 (1108)
++.++..+.|++++|++|+|+++|.+|++++++++|++++|++||+.++++++++.+++.++.+|++++++.++.+++ .
T Consensus 778 ~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 857 (995)
T 3ar4_A 778 LTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWF 857 (995)
T ss_dssp HHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCcchHHHHHHHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888889999999999999999999999999999999999999999999999999999999999998776543221 1
Q ss_pred hcC--------CCC---------------------CccccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHH
Q 043360 954 QVI--------PGM---------------------NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMV 1004 (1108)
Q Consensus 954 ~~~--------~~~---------------------~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~ 1004 (1108)
... ... .....+|++|++++++|+++.++||+.+...++.+.++|++++++
T Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~ 937 (995)
T 3ar4_A 858 MYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGS 937 (995)
T ss_dssp SSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHH
T ss_pred HhcccccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHH
Confidence 100 000 012357999999999999999999985433333478899999999
Q ss_pred HHHHHHHHHHHHH--HhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043360 1005 FLIVIAAQVLVVE--FATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIADSFL 1058 (1108)
Q Consensus 1005 i~~~~~~~~~~v~--~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~~~~ 1058 (1108)
+++++++++++++ +++.+|++.++++.+|+++++++++.+++.++.|++.|+|+
T Consensus 938 ~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~ 993 (995)
T 3ar4_A 938 ICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNYL 993 (995)
T ss_dssp HHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9988888876654 67899999999999999999999999999999999877653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-117 Score=1117.80 Aligned_cols=791 Identities=17% Similarity=0.214 Sum_probs=648.0
Q ss_pred CHHHHHHHhhhcChhHH---H---hhCCHHH-HHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhh
Q 043360 177 LPDLLDRIVKARNLNLL---K---EIGGPEK-VASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNN 246 (1108)
Q Consensus 177 ~~~~l~~~~~~~~~~~l---~---~~gg~~~-l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~ 246 (1108)
+.++|.+.++.+|-+.. + +.|++++ +++.|+++..+||+++|+++|+++ |++++++ .++|+.++++|.+
T Consensus 44 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~ 122 (920)
T 1mhs_A 44 DIDALIEDLESHDGHDAEEEEEEATPGGGRVVPEDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEK-ENHFLKFLGFFVG 122 (920)
T ss_dssp HHHHHHHHHSSCCCCCCSSSCCCSHHHHHSCCSSTTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCC-CSSHHHHTHHHHH
T ss_pred CHHHHHHHHhhhcccccccchhhhhcCccchhHHHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHH
Confidence 35566666654433211 1 3455544 567799998899999999999999 9999765 6788999999999
Q ss_pred hHHHHHHHHHHHhhccccccCCCCCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEE
Q 043360 247 FNILLLLVAAALSFVTGTIEQGPKDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIA 326 (1108)
Q Consensus 247 ~~~i~lli~ails~~~~~~~~~~~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~ 326 (1108)
+++++++++++++++++ .|.+++.|+++++++.+++.++++++++.+++|+ +..+.+++|+|||++++|+
T Consensus 123 ~~~~ll~~aai~s~~~g--------~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~--~l~~~~a~V~RdG~~~~I~ 192 (920)
T 1mhs_A 123 PIQFVMEGAAVLAAGLE--------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELK--KTLALKAVVLRDGTLKEIE 192 (920)
T ss_dssp HHHHHHHHHHHHCTTCS--------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--TCCCSSCEEECSSSEEECC
T ss_pred HHHHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccCCCEEEEEECCEEEEEE
Confidence 99999999999999887 6999988888888889999999999999999998 6677899999999999999
Q ss_pred ccccccCcEEEEcCCCccCcceEEEecCc-eeeeec-ccCCCCC---CCCCeeeecceEeeceEEEEEEEeccccHHHHH
Q 043360 327 VSNLLKGDVVRLAKGDRVPGDGLVVNSDG-LMLDDV-LNSEIDP---DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQV 401 (1108)
Q Consensus 327 ~~dLvvGDIV~l~~Gd~IPaDgill~g~~-l~VdeS-LTGES~p---~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i 401 (1108)
++||||||+|.|++||+|||||+|++|++ |.|||| |||||.| ..++.+|+||.+.+|.++++|++||.+|++|++
T Consensus 193 ~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I 272 (920)
T 1mhs_A 193 APEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRA 272 (920)
T ss_dssp TTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTT
T ss_pred HHHcCCCCEEEeCCCCccccceEEEecCceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHH
Confidence 99999999999999999999999999996 999999 9999999 678999999999999999999999999999997
Q ss_pred HHHH----------------HHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHH
Q 043360 402 LRSN----------------LSLAVTVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILV 465 (1108)
Q Consensus 402 ~~~~----------------~~~~~~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (1108)
.+.+ ++.++..+++++.++.|..... ...++...+.
T Consensus 273 ~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~----------------------------~~~~~~~~l~ 324 (920)
T 1mhs_A 273 AALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY----------------------------RSNPIVQILE 324 (920)
T ss_dssp TSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT----------------------------TTCCHHHHHH
T ss_pred HHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------------------cCCcHHHHHH
Confidence 6554 2222222222222222221111 1125678899
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCC
Q 043360 466 SALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNND 545 (1108)
Q Consensus 466 ~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 545 (1108)
.++++++++||||||++++++++.++.+| +++|++||+++++|+||++++||||||||||+|+|+|.+++..+. +..
T Consensus 325 ~av~llV~aiP~aLp~~vti~la~g~~~m-ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~~~- 401 (920)
T 1mhs_A 325 FTLAITIIGVPVGLPAVVTTTMAVGAAYL-AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-VDP- 401 (920)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHHHHHHH-HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-CCC-
T ss_pred HHHHHHHHhCchhHHHHHHHHHHHHHHHH-HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-CCH-
Confidence 99999999999999999999999999999 999999999999999999999999999999999999999876432 111
Q ss_pred cchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcc
Q 043360 546 VASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDED 625 (1108)
Q Consensus 546 ~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~ 625 (1108)
+ +++..+++|+.. ....+||+|.||++++++.+.. ......+++++.+||+|.||||+++++.++|+
T Consensus 402 ------~---~ll~~a~l~~~~-~~~~~~P~e~Al~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~-- 468 (920)
T 1mhs_A 402 ------E---DLMLTACLAASR-KKKGIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGE-- 468 (920)
T ss_dssp ------T---HHHHHHHHSCCC-SSCSCCSHHHHHHHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSS--
T ss_pred ------H---HHHHHHHHhcCC-cccCCChHHHHHHHHHHhcccc-hhhccccceeEEeeccCCCCeEEEEEEeCCCc--
Confidence 1 233333333321 1112499999999999877642 22346789999999999999999999876665
Q ss_pred eeEEEEEeccHHHHHhhcccccccCCccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec-
Q 043360 626 KIMHMHWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL- 703 (1108)
Q Consensus 626 ~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i- 703 (1108)
.++|+|||||.|+++|+. ..++ ++.++.+.+.+++|+.+|+|++++|||. .|++++|+|++++
T Consensus 469 --~~~~~KGape~il~~c~~-------~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~------~e~~l~~lGli~i~ 533 (920)
T 1mhs_A 469 --RITCVKGAPLFVLKTVEE-------DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR------GEGSWEILGIMPCM 533 (920)
T ss_dssp --CEEEEEECHHHHHHHCCC-------SSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS------SSCSCCCCBBCCCC
T ss_pred --EEEEEeCCHHHHHHhccc-------cCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec------cccccEEEEEEEEe
Confidence 678999999999999974 1245 5667889999999999999999999985 3689999999999
Q ss_pred ---ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC--CCCccccchhhhhhcCHHHHHHHhcccceecccC
Q 043360 704 ---REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP--ESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL 778 (1108)
Q Consensus 704 ---r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~--~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~s 778 (1108)
|||++++|++|+++||+|+|+||||+.||.+||++|||... +...++++|. +.++++++.+.++++.||||++
T Consensus 534 Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~ 611 (920)
T 1mhs_A 534 DPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVF 611 (920)
T ss_dssp CCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCC
T ss_pred ccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhCeEEEEeC
Confidence 99999999999999999999999999999999999999742 1245677887 6778888999999999999999
Q ss_pred HhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhh
Q 043360 779 ADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQ 856 (1108)
Q Consensus 779 P~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~ 856 (1108)
|+||.++|+.+|++|++|+|+|| |+||+||||+|||||||| +|+++||++||+++. +|+.|++++++||++|+|++
T Consensus 612 P~~K~~iV~~Lq~~g~~Vam~GD-GvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~ 689 (920)
T 1mhs_A 612 PQHKYNVVEILQQRGYLVAMTGD-GVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMY 689 (920)
T ss_dssp STHHHHHHHHHHTTTCCCEECCC-CGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEEcC-CcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999999 899999999999998 99999999999999999999
Q ss_pred hhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHHHHHHH
Q 043360 857 KFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTA 936 (1108)
Q Consensus 857 k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i~ 936 (1108)
+++.|.++.|+....+..+...+.+. |+++.|++|+|+++|. |++++++|+++.+ ++|+.++.+ .+++.++
T Consensus 690 k~i~~~l~~n~~~~~~~~~~~~~~~~-~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~----~~~~~~~ 760 (920)
T 1mhs_A 690 AYVVYRIALSIHLEIFLGLWIAILNR-SLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLP----KLWGMSV 760 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCSC-CCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSS----SCSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchHH----HHHHHHH
Confidence 99999999999765444443334443 4899999999999997 8999999988654 677765542 2333334
Q ss_pred HHHHHHHHHHHHHHHhhhcC-----CCCCccccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHH
Q 043360 937 VQVLCQVGVFLIFQFAGQVI-----PGMNRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAA 1011 (1108)
Q Consensus 937 ~~~~~~~~v~~~~~~~~~~~-----~~~~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~ 1011 (1108)
..|++.++..++.++..... +.......+|++|++++++|+++.+++|+. .++|+++ .|+++++++++..++
T Consensus 761 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~--~~~~~~~-~~~~~~~~~~~~~~~ 837 (920)
T 1mhs_A 761 LLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRAN--GPFWSSI-PSWQLSGAIFLVDIL 837 (920)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCS--SSCSCCS-CTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHHhccc--hhhhcCc-hHHHHHHHHHHHHHH
Confidence 45555555443333221110 011234578999999999999999999984 3466654 788888888888777
Q ss_pred HHHHHHHhHhhhccccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 043360 1012 QVLVVEFATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNFIAD 1055 (1108)
Q Consensus 1012 ~~~~v~~~~~~f~~~~l~~~~wl~~i~~~~~~l~~~~i~k~~~~ 1055 (1108)
++++.++. +|++.|+++.+|+.+++++++.+++.++.|++.+
T Consensus 838 ~~~~~~~~--~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~ 879 (920)
T 1mhs_A 838 ATCFTIWG--WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQ 879 (920)
T ss_dssp HHHHHSSS--STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCC
T ss_pred HHHHHHhh--hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77666544 8999999999999999999999999999997543
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-113 Score=1087.25 Aligned_cols=786 Identities=17% Similarity=0.197 Sum_probs=625.0
Q ss_pred CCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCCCCCc
Q 043360 197 GGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGPKDGW 273 (1108)
Q Consensus 197 gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~~~~~ 273 (1108)
-.++++++.|+++ .+||+++|+++|+++ |++++++ +++|+.+++||.++++++|+++++++++++... +....|
T Consensus 17 ~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~-~~~~~~ 93 (885)
T 3b8c_A 17 IPIEEVFQQLKCS-REGLTTQEGEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGD-GRPPDW 93 (885)
T ss_dssp SSTTCCTTTSSSC-SSCSTHHHHHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCT-TSCSCC
T ss_pred CCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccccH
Confidence 4678889999998 689999999999999 9999887 677889999999999999999999999887533 334469
Q ss_pred chhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEec
Q 043360 274 HDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNS 353 (1108)
Q Consensus 274 ~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g 353 (1108)
.+++.|++++++..+++.+++++.++.+++|. +..+.+++|+|||++++|+++||||||+|.|++||+|||||+|++|
T Consensus 94 ~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~--~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g 171 (885)
T 3b8c_A 94 QDFVGIICLLVINSTISFIEENNAGNAAAALM--AGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEG 171 (885)
T ss_dssp TTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTT--TSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEc
Confidence 99998888888888999999999999999998 6778899999999999999999999999999999999999999999
Q ss_pred Cceeeeec-ccCCCCC---CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH---------------HHHH-HHHH
Q 043360 354 DGLMLDDV-LNSEIDP---DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN---------------LSLA-VTVL 413 (1108)
Q Consensus 354 ~~l~VdeS-LTGES~p---~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~---------------~~~~-~~~l 413 (1108)
++|.|||| |||||.| ..++.+|+||.+.+|.++++|++||.+|.+|++.+.+ ++.+ +..+
T Consensus 172 ~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~ 251 (885)
T 3b8c_A 172 DPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSI 251 (885)
T ss_dssp SCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHHHHHHHHHHH
T ss_pred CcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHHHHHHHHHHH
Confidence 99899999 9999999 6789999999999999999999999999999876544 3222 1111
Q ss_pred HHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhh
Q 043360 414 IALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDK 493 (1108)
Q Consensus 414 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~ 493 (1108)
++.+.+..+..... ...++...+..++++++++|||+||+++++++++++.+
T Consensus 252 ~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r 303 (885)
T 3b8c_A 252 AIGMVIEIIVMYPI----------------------------QRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303 (885)
T ss_dssp HHHHHHHSTTTTTT----------------------------TCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHH
T ss_pred HHHHHHHHHHHHHH----------------------------ccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 11111100000000 00123356788999999999999999999999999999
Q ss_pred hhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCC
Q 043360 494 LLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISL 573 (1108)
Q Consensus 494 m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g 573 (1108)
| +++|++||+++++|+||++|+||||||||||+|+|+|.+.++. .+... .+++ +++..+.+|+. ...+
T Consensus 304 ~-ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~~----~~~~--~ll~~aa~~~~---~~~~ 371 (885)
T 3b8c_A 304 L-SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCKG----VEKD--QVLLFAAMASR---VENQ 371 (885)
T ss_dssp H-TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCSS----TTHH--HHHHHHHHHCC---SSSC
T ss_pred H-HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCCC----CCHH--HHHHHHHHHhC---CCCC
Confidence 9 9999999999999999999999999999999999999754321 11110 1111 23333433442 2369
Q ss_pred ChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCcc
Q 043360 574 WPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKS 653 (1108)
Q Consensus 574 ~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~ 653 (1108)
||+|.|+++++.+ ....++.+++++.+||+|.||||+++++..+|+ +++|+|||||.|+++|+..
T Consensus 372 ~p~~~Al~~~~~~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~----~~~~~KGa~e~il~~c~~~------- 436 (885)
T 3b8c_A 372 DAIDAAMVGMLAD----PKEARAGIREVHFLPFNPVDKRTALTYIDGSGN----WHRVSKGAPEQILELAKAS------- 436 (885)
T ss_dssp CSHHHHHHHTTCC----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSC----BCBCCCCSGGGTSSSSCCC-------
T ss_pred CchHHHHHHHhhc----hhhHhhcCceeecccCCcccceEEEEEEecCCc----EEEEEeCCHHHHHHhccCc-------
Confidence 9999999998753 223445688899999999999999998765554 6789999999999999731
Q ss_pred ccchhhHHHHHHHHHHHHhCCCeEEEEEEecCc--chhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCC
Q 043360 654 FEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE--VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSED 727 (1108)
Q Consensus 654 ~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~--~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD 727 (1108)
++.++++.+.+++++++|+|++++|||+++ ..+..|+|++|+|++++ |||++++|++|+++||+|+|+|||
T Consensus 437 ---~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD 513 (885)
T 3b8c_A 437 ---NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 513 (885)
T ss_dssp ---STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESS
T ss_pred ---hhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCC
Confidence 122445778889999999999999999876 34456889999999999 999999999999999999999999
Q ss_pred cHHHHHHHHHHcCCCCCCCCccccchhhhhh-cCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCC
Q 043360 728 ELLAVTEVACELGNFRPESNDIALEGEQFRE-LNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRD 806 (1108)
Q Consensus 728 ~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~-l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND 806 (1108)
|..||.+||+++||..+.....+++|++++. ++++++++.++++.||||++|+||.++|+.+|++|++|+|+|| |+||
T Consensus 514 ~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GD-GvND 592 (885)
T 3b8c_A 514 QLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGD-GVND 592 (885)
T ss_dssp CHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCC-SSTT
T ss_pred ChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcC-Cchh
Confidence 9999999999999975322345788988887 7777888999999999999999999999999999999999999 9999
Q ss_pred HHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCc
Q 043360 807 TPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESP 884 (1108)
Q Consensus 807 ~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~p 884 (1108)
+||||+|||||||| +|+++||++||+++. +|+.|++++++||++|+||++++.|++++|+..++..++.. +..+.|
T Consensus 593 apaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~-~~~~~~ 670 (885)
T 3b8c_A 593 APALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA-LIWEFD 670 (885)
T ss_dssp HHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHH-SSCSSC
T ss_pred HHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCcC
Confidence 99999999999999 899999999999998 89999999999999999999999999999997554444333 345678
Q ss_pred hhHHHHHHHHHHHhHHHHHhhhcccCCCCCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhc------CCC
Q 043360 885 ITSIQLIWVYSIMYMLGGLIMRMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQV------IPG 958 (1108)
Q Consensus 885 l~~~qll~~nli~~~l~~l~la~e~~~~~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~~~~~------~~~ 958 (1108)
++++|++|+|+++|..+ +++++|++.+. ++|. ...+ +.++..++..|+++++..+++++++.. .++
T Consensus 671 l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p~---~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (885)
T 3b8c_A 671 FSAFMVLIIAILNDGTI-MTISKDRVKPS---PTPD---SWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFG 742 (885)
T ss_dssp SCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCCC---STTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCC
T ss_pred cCHHHHHHHHHHHHHHH-HhhcccccCcc---cCCc---chhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccC
Confidence 99999999999999875 88888776542 2332 2222 445555667777777777665544321 112
Q ss_pred CC-----ccccch-hhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHHHHHHHhHhhhccccCChhH
Q 043360 959 MN-----RDIRKA-MTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQ 1032 (1108)
Q Consensus 959 ~~-----~~~~~T-~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~~v~~~~~~f~~~~l~~~~ 1032 (1108)
.+ ....+| ++|..++++|+ +.+++|+.. .++|+.. .|++.+.+++..++++++.++....++++.|+++.+
T Consensus 743 ~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 819 (885)
T 3b8c_A 743 VRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRS-WSFVERP-GALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGW 819 (885)
T ss_dssp SSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCT-TTSTTST-TTTTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTT
T ss_pred cccccchHHHHHHHHHHHHHHHHHH-HHHHhccCC-CCcccCc-cHHHHHHHHHHHHHHHHHHHhccccccccCCchHHH
Confidence 21 122334 45556778886 789999843 3334322 444444444444455544444334456799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043360 1033 WGICFILAVLPWGIHRAVNFIADSFLD 1059 (1108)
Q Consensus 1033 wl~~i~~~~~~l~~~~i~k~~~~~~~~ 1059 (1108)
|+++++.+++.+++.++.|++.++.+.
T Consensus 820 ~~~~~~~~~~~~~~~e~~k~~~~~~~~ 846 (885)
T 3b8c_A 820 AGVIWLYSIVTYFPLDVFKFAIRYILS 846 (885)
T ss_dssp HHHHHHHTGGGTHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999889999999988665443
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-76 Score=733.63 Aligned_cols=523 Identities=18% Similarity=0.253 Sum_probs=426.4
Q ss_pred CCchHHHHHHHHhhhh---HHHHHHHHHHHhhccc--------ccc------CCCCCCcchhHHHH-HHHHHHhchhhHH
Q 043360 232 HAREFFLFLLKASNNF---NILLLLVAAALSFVTG--------TIE------QGPKDGWHDGAAIL-IAVFVLLTFPAVT 293 (1108)
Q Consensus 232 ~~~s~~~~l~~~~~~~---~~i~lli~ails~~~~--------~~~------~~~~~~~~~~~~il-~~vl~v~~v~~~~ 293 (1108)
.+.+|++..|+++++. +..+..++...+++++ +.+ .+....|+|+++++ +++++..+++.+.
T Consensus 129 ~g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~llg~~le~~a 208 (736)
T 3rfu_A 129 GGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLLGQVLELKA 208 (736)
T ss_dssp TTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999876 3333333333333322 111 11234688887665 4444445777777
Q ss_pred HHHHHHHHHHHHHHhhcCcEEEEEE-CCEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---
Q 043360 294 NFRRARKLEKKQWEEKNKLEVKVVR-SGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP--- 368 (1108)
Q Consensus 294 ~~~~~~~~~~l~~~~~~~~~v~ViR-dG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p--- 368 (1108)
+.+..+.+++|. ...+.+++|+| ||++++|+++||+|||+|.|++||+|||||+|++|++ .|||| |||||.|
T Consensus 209 ~~~~~~ai~~L~--~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~LTGES~Pv~K 285 (736)
T 3rfu_A 209 REQTGSAIRALL--KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGEPIPVAK 285 (736)
T ss_dssp HCCCSSHHHHHT--CCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSSSTTCSSCEEE
T ss_pred HHHHHHHHHHHH--hcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECce-EeeecccCCccccEEe
Confidence 777777888887 77888999988 9999999999999999999999999999999999997 99999 9999999
Q ss_pred CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHhccCCCC
Q 043360 369 DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN-----------------LSLAVTVLIALVALIRLLWRKHSGDD 431 (1108)
Q Consensus 369 ~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~-----------------~~~~~~~l~~i~l~~~~~~~~~~~~~ 431 (1108)
..++.+++||.+.+|.++++|++||.+|.+|++.+.+ ..+++.++++++++..+.|.... .
T Consensus 286 ~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~-~- 363 (736)
T 3rfu_A 286 EASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLG-P- 363 (736)
T ss_dssp CTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-S-
T ss_pred ccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C-
Confidence 7899999999999999999999999999999999877 22222222222222222222110 0
Q ss_pred CCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhhcc
Q 043360 432 HELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGATM 511 (1108)
Q Consensus 432 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E~L 511 (1108)
.+ .+...+..++++++++|||+|++++++++..++.++ +++|+++|+++++|+|
T Consensus 364 --~~-----------------------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~-a~~gilvk~~~alE~l 417 (736)
T 3rfu_A 364 --QP-----------------------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG-AQSGVLIKNAEALERM 417 (736)
T ss_dssp --SS-----------------------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH-HHTTEEESCHHHHHHH
T ss_pred --Cc-----------------------hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH-hhcceeechHHHHHHh
Confidence 00 244678999999999999999999999999999999 9999999999999999
Q ss_pred cCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCCCh
Q 043360 512 GIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSLNV 591 (1108)
Q Consensus 512 G~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~~~ 591 (1108)
|++|+||||||||||+|+|+|.+++..+. . .++.+.+.... ++.+.||++.|+++++++.+.+.
T Consensus 418 ~~v~~i~fDKTGTLT~g~~~v~~i~~~~~--~-------~~~~l~~aa~l-------e~~s~hPla~Aiv~~a~~~~~~~ 481 (736)
T 3rfu_A 418 EKVNTLVVDKTGTLTEGHPKLTRIVTDDF--V-------EDNALALAAAL-------EHQSEHPLANAIVHAAKEKGLSL 481 (736)
T ss_dssp TSCCEEEECCBTTTBCSSCEEEEEEESSS--C-------HHHHHHHHHHH-------HHSSCCHHHHHHHHHHHTTCCCC
T ss_pred cCCCEEEEeCCCCCcCCceEEEEEEecCC--C-------HHHHHHHHHHH-------hhcCCChHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999984331 1 12333332222 35689999999999998776543
Q ss_pred hhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHH
Q 043360 592 EFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDME 671 (1108)
Q Consensus 592 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a 671 (1108)
....+|++.+++ ++.... ++.. +.+|+++.+.+.+.. ...+.+..++++
T Consensus 482 ---------~~~~~f~~~~g~-gv~~~~-~g~~------~~~G~~~~~~~~~~~--------------~~~~~~~~~~~~ 530 (736)
T 3rfu_A 482 ---------GSVEAFEAPTGK-GVVGQV-DGHH------VAIGNARLMQEHGGD--------------NAPLFEKADELR 530 (736)
T ss_dssp ---------CCCSCCCCCTTT-EEEECS-SSSC------EEEESHHHHHHHCCC--------------CHHHHHHHHHHH
T ss_pred ---------cCcccccccCCc-eEEEEE-CCEE------EEEcCHHHHHHcCCC--------------hhHHHHHHHHHH
Confidence 234577777665 444433 4432 356999988664432 134567788999
Q ss_pred hCCCeEEEEEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCC
Q 043360 672 DSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESN 747 (1108)
Q Consensus 672 ~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~ 747 (1108)
.+|+|++++|+ |.+++|++++ |++++++|++|+++|++++|+|||+..+|.++|+++||..
T Consensus 531 ~~G~~vl~va~-----------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~---- 595 (736)
T 3rfu_A 531 GKGASVMFMAV-----------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK---- 595 (736)
T ss_dssp HTTCEEEEEEE-----------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC----
T ss_pred hcCCeEEEEEE-----------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE----
Confidence 99999999999 4599999999 9999999999999999999999999999999999999976
Q ss_pred ccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHH
Q 043360 748 DIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMA 827 (1108)
Q Consensus 748 ~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~a 827 (1108)
++++++|+||.++|+.+|++|+.|+|+|| |.||+|||++|||||||| +|+|++
T Consensus 596 -------------------------v~a~~~P~~K~~~v~~l~~~g~~V~~vGD-G~ND~paL~~AdvGIAmg-~g~d~a 648 (736)
T 3rfu_A 596 -------------------------VVAEIMPEDKSRIVSELKDKGLIVAMAGD-GVNDAPALAKADIGIAMG-TGTDVA 648 (736)
T ss_dssp -------------------------EECSCCHHHHHHHHHHHHHHSCCEEEEEC-SSTTHHHHHHSSEEEEES-SSCSHH
T ss_pred -------------------------EEEecCHHHHHHHHHHHHhcCCEEEEEEC-ChHhHHHHHhCCEEEEeC-CccHHH
Confidence 99999999999999999999999999999 999999999999999999 899999
Q ss_pred Hhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHH
Q 043360 828 RECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITL 874 (1108)
Q Consensus 828 k~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~ 874 (1108)
+++||+++. ++..|.+++++||++++||++++.|.+.||++.+.++.
T Consensus 649 ~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAa 697 (736)
T 3rfu_A 649 IESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAA 697 (736)
T ss_dssp HHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 99999999999999999999999999999999887764
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-74 Score=706.21 Aligned_cols=479 Identities=18% Similarity=0.252 Sum_probs=391.4
Q ss_pred cchhHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEE
Q 043360 273 WHDGAAILIAVFV-LLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVV 351 (1108)
Q Consensus 273 ~~~~~~il~~vl~-v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill 351 (1108)
|++..++++++++ ..+++.+.+.+.++..+++. ...+.+++|+|||++++|+++||+|||+|.|++||+|||||+++
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~--~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl 172 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLV--GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV 172 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH--HTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE
Confidence 6776655544433 33445555555555677777 77789999999999999999999999999999999999999999
Q ss_pred ecCceeeeec-ccCCCCC---CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH-----------------HHHHH
Q 043360 352 NSDGLMLDDV-LNSEIDP---DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN-----------------LSLAV 410 (1108)
Q Consensus 352 ~g~~l~VdeS-LTGES~p---~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~-----------------~~~~~ 410 (1108)
+|++ .|||| |||||.| +.++.+|+||.+.+|.++++|++||.+|.+|++.+.+ ..+++
T Consensus 173 ~G~~-~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 251 (645)
T 3j08_A 173 EGES-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 251 (645)
T ss_dssp ECCE-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHH
T ss_pred ECcE-EEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 9987 99999 9999999 8899999999999999999999999999999999887 22222
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 043360 411 TVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFW 490 (1108)
Q Consensus 411 ~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~ 490 (1108)
.++++++++....+... . .. ++...+..++++++++|||+|++++++++..+
T Consensus 252 ~~vl~~a~~~~~~~~~~--~---~~-----------------------~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~ 303 (645)
T 3j08_A 252 PTVLLVAISAFIYWYFI--A---HA-----------------------PLLFAFTTLIAVLVVACPCAFGLATPTALTVG 303 (645)
T ss_dssp HHHHHHHHHHHHCSSCC--C---SC-----------------------SCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--c---CC-----------------------cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 22222222222222111 0 00 12234667889999999999999999999999
Q ss_pred HhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccc
Q 043360 491 NDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPE 570 (1108)
Q Consensus 491 ~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 570 (1108)
+.++ +++|++||+++++|+||++|+||||||||||+|+|+|.+++..+.. .++.+.+.... +.
T Consensus 304 ~~~~-a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~---------~~~~l~~aa~~-------e~ 366 (645)
T 3j08_A 304 MGKG-AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD---------ERELLRLAAIA-------ER 366 (645)
T ss_dssp HHHH-HTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC---------HHHHHHHHHHH-------HT
T ss_pred HHHH-HHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC---------HHHHHHHHHHH-------hh
Confidence 9999 9999999999999999999999999999999999999999986421 12333333222 35
Q ss_pred cCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccC
Q 043360 571 ISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSE 650 (1108)
Q Consensus 571 ~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~ 650 (1108)
.+.||++.|+++++++.|.+....+ +|++... .++.. . .+.+|+++.+.+....
T Consensus 367 ~s~hPla~Aiv~~a~~~g~~~~~~~---------~~~~~~g-~g~~~-----~------~v~~g~~~~~~~~~~~----- 420 (645)
T 3j08_A 367 RSEHPIAEAIVKKALEHGIELGEPE---------KVEVIAG-EGVVA-----D------GILVGNKRLMEDFGVA----- 420 (645)
T ss_dssp TCCSHHHHHHHHHHHHTTCCCCSCC---------CCEEETT-TEEEE-----T------TEEEECHHHHHHTTCC-----
T ss_pred cCCChhHHHHHHHHHhcCCCcCCcc---------ceEEecC-CceEE-----E------EEEECCHHHHHhcCCC-----
Confidence 6899999999999998877543211 1221111 12211 1 2356998877543221
Q ss_pred CccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecC
Q 043360 651 GKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSE 726 (1108)
Q Consensus 651 g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTG 726 (1108)
..+.+.+..++++.+|+|++++|+ |++++|++++ ||+++++|++|+++|++++|+||
T Consensus 421 --------~~~~~~~~~~~~~~~g~~~l~va~-----------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TG 481 (645)
T 3j08_A 421 --------VSNEVELALEKLEREAKTAVIVAR-----------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITG 481 (645)
T ss_dssp --------CCHHHHHHHHHHHTTTCCCEEEEE-----------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECS
T ss_pred --------ccHHHHHHHHHHHhcCCeEEEEEE-----------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeC
Confidence 124567788899999999999998 5699999999 99999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCC
Q 043360 727 DELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRD 806 (1108)
Q Consensus 727 D~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND 806 (1108)
|+..+|.++|+++||.. +++|++|+||.++|+.+|++ +.|+|+|| |.||
T Consensus 482 d~~~~a~~ia~~lgi~~-----------------------------~~~~~~P~~K~~~v~~l~~~-~~v~~vGD-g~ND 530 (645)
T 3j08_A 482 DNWRSAEAISRELNLDL-----------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGD-GIND 530 (645)
T ss_dssp SCHHHHHHHHHHHTCSE-----------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEEC-SSSC
T ss_pred CCHHHHHHHHHHcCCCE-----------------------------EEEeCCHHhHHHHHHHHhhC-CeEEEEeC-CHhH
Confidence 99999999999999975 99999999999999999998 89999999 9999
Q ss_pred HHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHH
Q 043360 807 TPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVT 876 (1108)
Q Consensus 807 ~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~ 876 (1108)
+|||++|||||||| +|++.++++||+++. ++..+.+++++||++|+|+++++.|.+++|++.+.+++.+
T Consensus 531 ~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~ 601 (645)
T 3j08_A 531 APALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGL 601 (645)
T ss_dssp HHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 899999999999997 9999999999999999999999999999999977766543
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-73 Score=712.07 Aligned_cols=479 Identities=18% Similarity=0.252 Sum_probs=393.0
Q ss_pred cchhHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEE
Q 043360 273 WHDGAAILIAVFV-LLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVV 351 (1108)
Q Consensus 273 ~~~~~~il~~vl~-v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill 351 (1108)
|++..++++++++ ..+++.+.+.+.++.++++. ...+..++|+|||++++|+++||+|||+|.|++||+|||||+|+
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~--~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl 250 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLV--GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV 250 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHH--HTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE
Confidence 6776665544433 33555555555556677777 67789999999999999999999999999999999999999999
Q ss_pred ecCceeeeec-ccCCCCC---CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHH-----------------HHHHH
Q 043360 352 NSDGLMLDDV-LNSEIDP---DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN-----------------LSLAV 410 (1108)
Q Consensus 352 ~g~~l~VdeS-LTGES~p---~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~-----------------~~~~~ 410 (1108)
+|++ .|||| |||||.| +.++.+|+||.+.+|.++++|+++|.+|.+|++.+.+ ..+++
T Consensus 251 ~G~~-~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~ 329 (723)
T 3j09_A 251 EGES-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329 (723)
T ss_dssp ECCE-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHH
T ss_pred ECCe-EEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 9987 99999 9999999 8899999999999999999999999999999999887 22222
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 043360 411 TVLIALVALIRLLWRKHSGDDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFW 490 (1108)
Q Consensus 411 ~~l~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~ 490 (1108)
.++++++++...++... . ..++...+..++++++++|||+|++++++++..+
T Consensus 330 ~~vl~~a~~~~~~~~~~--~--------------------------~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~ 381 (723)
T 3j09_A 330 PTVLLVAISAFIYWYFI--A--------------------------HAPLLFAFTTLIAVLVVACPCAFGLATPTALTVG 381 (723)
T ss_dssp HHHHHHHHHHHTTSCSS--T--------------------------TCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--c--------------------------CCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 22222222222111111 0 0022345788999999999999999999999999
Q ss_pred HhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccc
Q 043360 491 NDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPE 570 (1108)
Q Consensus 491 ~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 570 (1108)
+.++ +++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.. .++.+.+.... +.
T Consensus 382 ~~~~-a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~---------~~~~l~~aa~~-------e~ 444 (723)
T 3j09_A 382 MGKG-AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD---------ERELLRLAAIA-------ER 444 (723)
T ss_dssp HHHH-HTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC---------HHHHHHHHHHH-------HT
T ss_pred HHHH-HHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC---------HHHHHHHHHHH-------hc
Confidence 9999 9999999999999999999999999999999999999999986421 12333333222 35
Q ss_pred cCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccC
Q 043360 571 ISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSE 650 (1108)
Q Consensus 571 ~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~ 650 (1108)
.+.||++.|+++++++.|.+..... +|++... .++.. . .+.+|+++.+.+....
T Consensus 445 ~s~hP~~~Ai~~~a~~~~~~~~~~~---------~~~~~~g-~g~~~-----~------~~~~g~~~~~~~~~~~----- 498 (723)
T 3j09_A 445 RSEHPIAEAIVKKALEHGIELGEPE---------KVEVIAG-EGVVA-----D------GILVGNKRLMEDFGVA----- 498 (723)
T ss_dssp TCCSHHHHHHHHHHHHTTCCCCSCC---------CCEEETT-TEEEE-----T------TEEEECHHHHHHTTCC-----
T ss_pred cCCCchhHHHHHHHHhcCCCcCCcc---------ceEEecC-CceEE-----E------EEEECCHHHHHhcCCC-----
Confidence 6899999999999998876543211 1221111 12211 1 2356998877553321
Q ss_pred CccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecC
Q 043360 651 GKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSE 726 (1108)
Q Consensus 651 g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTG 726 (1108)
..+.+.+.+++++.+|+|++++|+ |++++|++++ ||+++++|+.|+++|++++|+||
T Consensus 499 --------~~~~~~~~~~~~~~~g~~~~~va~-----------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TG 559 (723)
T 3j09_A 499 --------VSNEVELALEKLEREAKTAVIVAR-----------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITG 559 (723)
T ss_dssp --------CCHHHHHHHHHHHTTTCEEEEEEE-----------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECS
T ss_pred --------ccHHHHHHHHHHHhcCCeEEEEEE-----------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECC
Confidence 124577788999999999999998 5699999999 99999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCC
Q 043360 727 DELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRD 806 (1108)
Q Consensus 727 D~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND 806 (1108)
|+..+|.++|+++||.. +++|++|+||.++|+.+|++ +.|+|+|| |.||
T Consensus 560 d~~~~a~~ia~~lgi~~-----------------------------~~~~~~P~~K~~~v~~l~~~-~~v~~vGD-g~ND 608 (723)
T 3j09_A 560 DNWRSAEAISRELNLDL-----------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGD-GIND 608 (723)
T ss_dssp SCHHHHHHHHHHHTCSE-----------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEEC-SSTT
T ss_pred CCHHHHHHHHHHcCCcE-----------------------------EEccCCHHHHHHHHHHHhcC-CeEEEEEC-Chhh
Confidence 99999999999999975 99999999999999999988 89999999 9999
Q ss_pred HHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHH
Q 043360 807 TPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVT 876 (1108)
Q Consensus 807 ~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~ 876 (1108)
+|||++|||||||| +|++.++++||+++. ++..|.+++++||++|+|+++++.|.+++|++.+.+++.+
T Consensus 609 ~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~~ 679 (723)
T 3j09_A 609 APALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGL 679 (723)
T ss_dssp HHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 899999999999998 9999999999999999999999999999999987776544
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-29 Score=278.29 Aligned_cols=254 Identities=22% Similarity=0.291 Sum_probs=195.0
Q ss_pred HHHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccc
Q 043360 489 FWNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLV 568 (1108)
Q Consensus 489 ~~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 568 (1108)
.++.++ +++|+++|+.+++|.|+++++||||||||||+|+|.|.++. .. +++++++...
T Consensus 4 ~a~~~~-~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~------~~-------~~~l~~~~~~------- 62 (263)
T 2yj3_A 4 SLYEKM-LHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI------GD-------SLSLAYAASV------- 62 (263)
Confidence 356788 99999999999999999999999999999999999999885 11 1233332222
Q ss_pred cccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccc
Q 043360 569 PEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYD 648 (1108)
Q Consensus 569 ~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~ 648 (1108)
+..+.||...|+.+++++.|....... .|... ...++-... ++. .+.-|.++
T Consensus 63 e~~s~hp~a~ai~~~~~~~g~~~~~~~---------~~~~~-~G~g~~~~~-~~~------~~~~G~~~----------- 114 (263)
T 2yj3_A 63 EALSSHPIAKAIVKYAKEQGVKILEVK---------DFKEI-SGIGVRGKI-SDK------IIEVKKAE----------- 114 (263)
Confidence 356899999999999887665321110 00000 000100000 000 00011111
Q ss_pred cCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEe
Q 043360 649 SEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILV 724 (1108)
Q Consensus 649 ~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~ml 724 (1108)
+|.+ +.++++. .+.|.+.+ +|+++++++.|++.|+++.|+
T Consensus 115 ------------------------~~~~-~~~~~~~-----------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~ 158 (263)
T 2yj3_A 115 ------------------------NNND-IAVYING-----------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIIL 158 (263)
Confidence 2333 4444433 56777666 999999999999999999999
Q ss_pred cCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCC
Q 043360 725 SEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSST 804 (1108)
Q Consensus 725 TGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ 804 (1108)
|||+..++..+++++||.. +|+.+.|++|..+++.++..++.|+|+|| |.
T Consensus 159 T~~~~~~~~~~~~~~gl~~-----------------------------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD-~~ 208 (263)
T 2yj3_A 159 SGDKEDKVKELSKELNIQE-----------------------------YYSNLSPEDKVRIIEKLKQNGNKVLMIGD-GV 208 (263)
Confidence 9999999999999999965 67888899999999999998899999999 99
Q ss_pred CCHHHHhhCCccEecCCCccHHHHhccchhh--cccccHHHHHHhhhhhhhhhhhh
Q 043360 805 RDTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQKF 858 (1108)
Q Consensus 805 ND~~aLk~AdVGIamg~~gte~ak~aADivl--~~f~~I~~li~~GR~~~~~i~k~ 858 (1108)
||++|++.|++|+++| .+++.+++.||+++ .++..|..++..+|+++++|+++
T Consensus 209 ~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 209 NDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 9999999999999999 78999999999999 49999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=240.47 Aligned_cols=273 Identities=19% Similarity=0.265 Sum_probs=204.9
Q ss_pred HHhhhhhccccccCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhccccccc
Q 043360 490 WNDKLLINHHAKPQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVP 569 (1108)
Q Consensus 490 ~~~~m~~~~~ilvr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 569 (1108)
+.+++ +++|+++|+.+++|+|+++++||||||||||.+.+.+.+++..+. . .++++++.... +
T Consensus 9 ~~~~~-~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~-------~~~~l~~~~~~-------e 71 (287)
T 3a1c_A 9 GSRKG-AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D-------ERELLRLAAIA-------E 71 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C-------HHHHHHHHHHH-------T
T ss_pred hHHHH-HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C-------HHHHHHHHHHH-------h
Confidence 56788 999999999999999999999999999999999999999987653 1 13344433222 4
Q ss_pred ccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhccccccc
Q 043360 570 EISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDS 649 (1108)
Q Consensus 570 ~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~ 649 (1108)
..+.||++.|+.+++++.|++.... +.+ ..+ .++++.. . .+.+|+++.+.+.+..
T Consensus 72 ~~s~hp~~~a~~~~~~~~g~~~~~~-~~~---~~~------~G~~~~~-----~------~~~~g~~~~~~~~~~~---- 126 (287)
T 3a1c_A 72 RRSEHPIAEAIVKKALEHGIELGEP-EKV---EVI------AGEGVVA-----D------GILVGNKRLMEDFGVA---- 126 (287)
T ss_dssp TTCCSHHHHHHHHHHHHTTCCCCCC-SCE---EEE------TTTEEEE-----T------TEEEECHHHHHHTTCC----
T ss_pred hcCCCHHHHHHHHHHHhcCCCcccc-ccc---eee------cCCCeEE-----E------EEEECCHHHHHhcCCC----
Confidence 6689999999999999888653211 111 111 0111111 1 1245766654332211
Q ss_pred CCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEec
Q 043360 650 EGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVS 725 (1108)
Q Consensus 650 ~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlT 725 (1108)
+ .+.+.+..+.+..+|.+++++++.. .+.|.+.. +|++.++++.|+++|+++.++|
T Consensus 127 ------~---~~~~~~~~~~~~~~g~~~i~~~~d~-----------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T 186 (287)
T 3a1c_A 127 ------V---SNEVELALEKLEREAKTAVIVARNG-----------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT 186 (287)
T ss_dssp ------C---CHHHHHHHHHHHHTTCEEEEEEETT-----------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred ------c---cHHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEe
Confidence 0 1234556778888999999999843 78887655 9999999999999999999999
Q ss_pred CCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCC
Q 043360 726 EDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTR 805 (1108)
Q Consensus 726 GD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~N 805 (1108)
|++...+..+.+.+|+.. +|..+.|+.|...++.++.. +.++|+|| +.|
T Consensus 187 ~~~~~~~~~~l~~~gl~~-----------------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGD-s~~ 235 (287)
T 3a1c_A 187 GDNWRSAEAISRELNLDL-----------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGD-GIN 235 (287)
T ss_dssp SSCHHHHHHHHHHHTCSE-----------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEEC-TTT
T ss_pred CCCHHHHHHHHHHhCCce-----------------------------eeeecChHHHHHHHHHHhcC-CeEEEEEC-CHH
Confidence 999999999999999865 67778899999999999888 89999999 999
Q ss_pred CHHHHhhCCccEecCCCccHHHHhccchhh--cccccHHHHHHhhhhhhhhhh
Q 043360 806 DTPALKEADVGITEENKCTEMARECSDIVI--SAVGSLLPILKLGRCAYCNIQ 856 (1108)
Q Consensus 806 D~~aLk~AdVGIamg~~gte~ak~aADivl--~~f~~I~~li~~GR~~~~~i~ 856 (1108)
|++|++.|++|+++| ++.+..++.||+++ .++..+..++..+|.++++|+
T Consensus 236 Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 236 DAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp CHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 999999999999998 67776778899999 599999999999999999875
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-22 Score=221.52 Aligned_cols=270 Identities=21% Similarity=0.249 Sum_probs=199.8
Q ss_pred cCCCchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHH
Q 043360 502 PQNLSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLV 581 (1108)
Q Consensus 502 vr~~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl 581 (1108)
+|+.+++|.|++++.|||||+||||.|+|+|.++...+. . ..+.+.++... +....+|...++.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~--~-------~~~~~~~~~~~-------~~~s~~~~~~a~~ 64 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH--S-------EDELLQIAASL-------EARSEHPIAAAIV 64 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS--C-------HHHHHHHHHHH-------HTTCCSHHHHHHH
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC--C-------HHHHHHHHHHh-------hccCCCHHHHHHH
Confidence 588999999999999999999999999999999987654 1 13344444333 3557889999999
Q ss_pred HHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHH
Q 043360 582 SWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKR 661 (1108)
Q Consensus 582 ~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~ 661 (1108)
++++..|..... .+.+..++ .+.+...+ ++. .+..|.++.+.......
T Consensus 65 ~~~~~~g~~~~~----~~~~~~~~----g~~~~~~~---~~~------~~~~~~~~~~~~~~~~~--------------- 112 (280)
T 3skx_A 65 EEAEKRGFGLTE----VEEFRAIP----GKGVEGIV---NGR------RYMVVSPGYIRELGIKT--------------- 112 (280)
T ss_dssp HHHHHTTCCCCC----CEEEEEET----TTEEEEEE---TTE------EEEEECHHHHHHTTCCC---------------
T ss_pred HHHHhcCCCCCC----ccceeecC----CCEEEEEE---CCE------EEEEecHHHHHHcCCCc---------------
Confidence 999988765321 11122221 11122111 222 22347777765543321
Q ss_pred HHHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHH
Q 043360 662 RFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVAC 737 (1108)
Q Consensus 662 ~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~ 737 (1108)
.+...++..++.+.+.+++.. .++|.+.+ +|++.++++.|++.|+++.++||+....+..+++
T Consensus 113 --~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~ 179 (280)
T 3skx_A 113 --DESVEKLKQQGKTVVFILKNG-----------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAE 179 (280)
T ss_dssp --CTTHHHHHTTTCEEEEEEETT-----------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred --hHHHHHHHhCCCeEEEEEECC-----------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 123456778899999888743 77888776 9999999999999999999999999999999999
Q ss_pred HcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccE
Q 043360 738 ELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGI 817 (1108)
Q Consensus 738 ~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGI 817 (1108)
++|+.. .|..+.|.+|...++.+.+.. .++|+|| +.||++|++.|++|+
T Consensus 180 ~~gl~~-----------------------------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD-~~nDi~~~~~Ag~~v 228 (280)
T 3skx_A 180 ELGLDD-----------------------------YFAEVLPHEKAEKVKEVQQKY-VTAMVGD-GVNDAPALAQADVGI 228 (280)
T ss_dssp HHTCSE-----------------------------EECSCCGGGHHHHHHHHHTTS-CEEEEEC-TTTTHHHHHHSSEEE
T ss_pred HcCChh-----------------------------HhHhcCHHHHHHHHHHHHhcC-CEEEEeC-CchhHHHHHhCCceE
Confidence 999975 788899999999999998876 5699999 999999999999999
Q ss_pred ecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhhhhhhhhHhh
Q 043360 818 TEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNIQKFTKLQLT 864 (1108)
Q Consensus 818 amg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i~k~i~~~l~ 864 (1108)
+|| ++.+.+++.||+++. ++..+.+++..+|++++++++++.|.+.
T Consensus 229 a~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 229 AIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp ECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred Eec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999 788888899999985 9999999999999999999999988764
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=192.12 Aligned_cols=102 Identities=24% Similarity=0.411 Sum_probs=95.8
Q ss_pred HHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCCCC---CCCCeeee
Q 043360 301 LEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEIDP---DRNPFLFS 376 (1108)
Q Consensus 301 ~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES~p---~~~~~l~~ 376 (1108)
+++|. ...+..++|+|||++++|++++|+|||+|.|++||+|||||++++|+. .|||| |||||.| ..++.+|+
T Consensus 3 l~~L~--~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~~g~~v~a 79 (113)
T 2hc8_A 3 IKKLV--GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDEVFG 79 (113)
T ss_dssp HHHHH--HHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCEECT
T ss_pred HHHHh--cCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEECCCCEEEe
Confidence 45565 677999999999999999999999999999999999999999999985 99999 9999999 78899999
Q ss_pred cceEeeceEEEEEEEeccccHHHHHHHHH
Q 043360 377 GSKVMEGHGTMLLISVGGNIASGQVLRSN 405 (1108)
Q Consensus 377 Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~ 405 (1108)
||.+.+|.+.++|+++|.+|.+|++.+.+
T Consensus 80 Gt~~~~G~~~~~V~~~g~~T~~~~i~~lv 108 (113)
T 2hc8_A 80 ATINNTGVLKIRATRVGGETLLAQIVKLV 108 (113)
T ss_dssp TCEECSSCEEEEEEECGGGSHHHHHHHHH
T ss_pred CCEEeeceEEEEEEEecCcCHHHHHHHHH
Confidence 99999999999999999999999998764
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-21 Score=190.55 Aligned_cols=108 Identities=22% Similarity=0.394 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHhhcCcEEEEEECCE------EEEEEccccccCcEEEEcCCCccCcceEEEecCceeeeec-ccCCC
Q 043360 294 NFRRARKLEKKQWEEKNKLEVKVVRSGR------EQLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLMLDDV-LNSEI 366 (1108)
Q Consensus 294 ~~~~~~~~~~l~~~~~~~~~v~ViRdG~------~~~I~~~dLvvGDIV~l~~Gd~IPaDgill~g~~l~VdeS-LTGES 366 (1108)
+++..+.+++|. ...+..++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|++ .|||| |||||
T Consensus 2 ~~ka~~~l~~L~--~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs 78 (124)
T 2kij_A 2 SFTMSEALAKLI--SLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEA 78 (124)
T ss_dssp ----CCHHHHHH--HTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCS
T ss_pred hHHHHHHHHHHh--ccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCC
Confidence 356677788887 77899999999764 6899999999999999999999999999999998 99999 99999
Q ss_pred CC---CCCCeeeecceEeeceEEEEEEEeccccHHHHHHHH
Q 043360 367 DP---DRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRS 404 (1108)
Q Consensus 367 ~p---~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~ 404 (1108)
.| ..++.+|+||.+.+|.+.++|+++|.+|.+|++.++
T Consensus 79 ~pv~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~l 119 (124)
T 2kij_A 79 MPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKL 119 (124)
T ss_dssp SCEECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHH
T ss_pred ccEEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHH
Confidence 99 788999999999999999999999999999999875
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.8e-20 Score=189.34 Aligned_cols=126 Identities=16% Similarity=0.182 Sum_probs=109.8
Q ss_pred cCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccC
Q 043360 571 ISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSE 650 (1108)
Q Consensus 571 ~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~ 650 (1108)
..+||+|.||++++...+ ....++.|+++..+||||+||||+|+++.+++. +++|+|||||.|+++|+.+.. +
T Consensus 31 ~~~n~~d~Ail~~~~~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~----~~l~~KGApE~IL~~C~~~~~-~ 103 (170)
T 3gwi_A 31 GLKNLLDTAVLEGTDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEH----HQLVCKGALQEILNVCSQVRH-N 103 (170)
T ss_dssp SCCCHHHHHHHHTSCHHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSSE----EEEEEEECHHHHHTTEEEEEE-T
T ss_pred CCCChHHHHHHHHHHhcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCCC----EEEEEcCCcHHHHHHhHHHhc-C
Confidence 368999999999876433 234567899999999999999999999876554 889999999999999998764 8
Q ss_pred Cccccc-hhhHHHHHHHHHHHHhCCCeEEEEEEecCcc-----hhhhccCceeeEEEec
Q 043360 651 GKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEV-----SEIKENGLHLLALAGL 703 (1108)
Q Consensus 651 g~~~~l-~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~-----~~~~E~~l~llG~i~i 703 (1108)
|+.+|+ ++.++.+.+.+++|+.+|+|||++|||+++. ....|+||+|+|++|+
T Consensus 104 g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~ 162 (170)
T 3gwi_A 104 GEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAF 162 (170)
T ss_dssp TEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEE
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhcc
Confidence 889999 8899999999999999999999999999862 2357999999999998
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.2e-21 Score=214.38 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=110.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHh--cccceecccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL--DSMTLMGSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~--~~~~V~ar~sP~~ 781 (1108)
||+++++++.|+++|++|.|+|||+..++.++|+++|+..+ ...+.. ..+. ..++++...+ +.+.++++..|.+
T Consensus 143 ~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~--~~~i~~-n~l~-~~~~~~~~~~~~~~i~~~~k~~~~~ 218 (297)
T 4fe3_A 143 KEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS--NVKVVS-NFMD-FDENGVLKGFKGELIHVFNKHDGAL 218 (297)
T ss_dssp CBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCT--TEEEEE-ECEE-ECTTSBEEEECSSCCCTTCHHHHHH
T ss_pred CCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcc--cceEEe-eeEE-EcccceeEeccccccchhhcccHHH
Confidence 99999999999999999999999999999999999999764 111111 0000 1111111111 1234688899999
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHh---hCCccEecCC------CccHHHHhccchhhc--ccccHHHHHHh
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALK---EADVGITEEN------KCTEMARECSDIVIS--AVGSLLPILKL 847 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk---~AdVGIamg~------~gte~ak~aADivl~--~f~~I~~li~~ 847 (1108)
|...+..+++.++.|+|+|| |+||+||++ .||||||||. +|++.+++++||||+ ++..++++|.+
T Consensus 219 k~~~~~~~~~~~~~v~~vGD-GiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il~ 294 (297)
T 4fe3_A 219 KNTDYFSQLKDNSNIILLGD-SQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSILQ 294 (297)
T ss_dssp TCHHHHHHTTTCCEEEEEES-SGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHHH
T ss_pred HHHHHHHhhccCCEEEEEeC-cHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHHH
Confidence 99999999999999999999 999999955 9999999995 678888999999999 89999998653
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.9e-12 Score=135.29 Aligned_cols=124 Identities=17% Similarity=0.233 Sum_probs=108.1
Q ss_pred HHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHH
Q 043360 710 TVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSV 789 (1108)
Q Consensus 710 aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~l 789 (1108)
+++.|+++|+++.++||+....+..+++++|+.. +|... .+|.+.++.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~-----------------------------~f~~~--~~K~~~~~~~ 102 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH-----------------------------LFQGR--EDKLVVLDKL 102 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE-----------------------------EECSC--SCHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH-----------------------------HhcCc--CChHHHHHHH
Confidence 8999999999999999999999999999999975 44443 6777777777
Q ss_pred HhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhcc------cccHHHHHHhhhhhhhhhhhhh
Q 043360 790 KEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISA------VGSLLPILKLGRCAYCNIQKFT 859 (1108)
Q Consensus 790 q~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~~------f~~I~~li~~GR~~~~~i~k~i 859 (1108)
.++ .+.++|+|| +.||++|++.|++|++++ ++.+.+++.||+++.+ +..+.+.+...|..++++++++
T Consensus 103 ~~~~g~~~~~~~~vGD-~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~ 180 (189)
T 3mn1_A 103 LAELQLGYEQVAYLGD-DLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVY 180 (189)
T ss_dssp HHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTT
T ss_pred HHHcCCChhHEEEECC-CHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHH
Confidence 655 467999999 999999999999999999 7899999999999983 7888999999999999999999
Q ss_pred hhHhhcc
Q 043360 860 KLQLTGC 866 (1108)
Q Consensus 860 ~~~l~~n 866 (1108)
.|.+.+|
T Consensus 181 ~~~~~~~ 187 (189)
T 3mn1_A 181 LEGHHHH 187 (189)
T ss_dssp STTC---
T ss_pred hcccccc
Confidence 9999887
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.04 E-value=1.5e-10 Score=131.76 Aligned_cols=146 Identities=14% Similarity=0.152 Sum_probs=105.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCcc-ccchhhhhhcCHHHHHHHhccccee-cccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI-ALEGEQFRELNSTERMAKLDSMTLM-GSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~-vi~G~~l~~l~~~~~~~~~~~~~V~-ar~sP~~ 781 (1108)
+|++.+.++.|+++|+++.|+||+....+..+++++|+...-...+ +.+|. +.. .+. --..+..
T Consensus 180 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~-~tg-------------~~~~~~~~~kp 245 (335)
T 3n28_A 180 MPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGK-LTG-------------QVLGEVVSAQT 245 (335)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-EEE-------------EEESCCCCHHH
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCe-eee-------------eecccccChhh
Confidence 8999999999999999999999999999999999999963100000 00000 000 000 0012344
Q ss_pred HHHHHHHHHh----CCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhhh
Q 043360 782 KLLLVQSVKE----KGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCNI 855 (1108)
Q Consensus 782 K~~iV~~lq~----~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~i 855 (1108)
|.+.++.+.+ ..+.++|+|| |.||++|++.|++|++| ++.+..++.||+++. ++..+..++........++
T Consensus 246 k~~~~~~~~~~lgi~~~~~v~vGD-s~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~ 322 (335)
T 3n28_A 246 KADILLTLAQQYDVEIHNTVAVGD-GANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKL 322 (335)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHcCCChhhEEEEeC-CHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhh
Confidence 5555544433 3468999999 99999999999999999 689999999999988 9999999998888888899
Q ss_pred hhhhhhHhhcc
Q 043360 856 QKFTKLQLTGC 866 (1108)
Q Consensus 856 ~k~i~~~l~~n 866 (1108)
+.++.+.+.+|
T Consensus 323 ~~~~~~~~~~~ 333 (335)
T 3n28_A 323 SWKSKEGHHHH 333 (335)
T ss_dssp CCC--------
T ss_pred ccccccccccc
Confidence 99999998887
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=6e-10 Score=115.15 Aligned_cols=130 Identities=12% Similarity=0.116 Sum_probs=104.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.++..++|+.|+++|+++.++||++...+..+++++|+.. ++... ..|.
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~-----------------------------~~~~~--k~k~ 85 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-----------------------------FFLGK--LEKE 85 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-----------------------------EEESC--SCHH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce-----------------------------eecCC--CCcH
Confidence 5678899999999999999999999999999999999864 23222 4566
Q ss_pred HHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccc----cHHHHHHhhhhhhh
Q 043360 784 LLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVG----SLLPILKLGRCAYC 853 (1108)
Q Consensus 784 ~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~----~I~~li~~GR~~~~ 853 (1108)
..++.+.++ | +.|+|+|| +.||++|++.|+++++|+ ++.+.+++.||+++. +-. .+.+.+...|..++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~vGD-~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~ 163 (180)
T 1k1e_A 86 TACFDLMKQAGVTAEQTAYIGD-DSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSS 163 (180)
T ss_dssp HHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTH
T ss_pred HHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchh
Confidence 666655443 4 67999999 999999999999999998 788999999999998 233 34455566788888
Q ss_pred hhhhhhhhHhhcc
Q 043360 854 NIQKFTKLQLTGC 866 (1108)
Q Consensus 854 ~i~k~i~~~l~~n 866 (1108)
+++..+.|....+
T Consensus 164 ~~~~~~~~~~~~~ 176 (180)
T 1k1e_A 164 VFDTAQGFLKSVK 176 (180)
T ss_dssp HHHCHHHHHHHGG
T ss_pred hhhhccchhhhhc
Confidence 9888887776543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.8e-10 Score=118.51 Aligned_cols=113 Identities=18% Similarity=0.215 Sum_probs=92.7
Q ss_pred HHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHH
Q 043360 709 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQS 788 (1108)
Q Consensus 709 ~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~ 788 (1108)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-----------------------------~~~~~--k~k~~~~~~ 107 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL-----------------------------IYQGQ--DDKVQAYYD 107 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-----------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-----------------------------EeeCC--CCcHHHHHH
Confidence 35999999999999999999999999999999975 44444 456666666
Q ss_pred HHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--c----cccHHHHHHhhhhhhhh
Q 043360 789 VKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--A----VGSLLPILKLGRCAYCN 854 (1108)
Q Consensus 789 lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~----f~~I~~li~~GR~~~~~ 854 (1108)
+.+. .+.++|+|| +.||.+|++.|+++++|+ ++.+.+++.||+++. + +..+.+.+...|..+++
T Consensus 108 ~~~~~~~~~~~~~~vGD-~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~~~ 181 (195)
T 3n07_A 108 ICQKLAIAPEQTGYIGD-DLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNELDV 181 (195)
T ss_dssp HHHHHCCCGGGEEEEES-SGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSSCC
T ss_pred HHHHhCCCHHHEEEEcC-CHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccHHH
Confidence 6543 357999999 999999999999999999 799999999999998 2 45566666666665554
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.96 E-value=6.2e-10 Score=118.36 Aligned_cols=112 Identities=14% Similarity=0.214 Sum_probs=94.1
Q ss_pred HHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHH
Q 043360 710 TVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSV 789 (1108)
Q Consensus 710 aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~l 789 (1108)
+++.|+++|+++.++||+....+..+++++|+.. +|... .+|...++.+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~-----------------------------~f~~~--k~K~~~l~~~ 132 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH-----------------------------LYQGQ--SDKLVAYHEL 132 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------EECSC--SSHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------hhccc--CChHHHHHHH
Confidence 8999999999999999999999999999999975 55555 6678888777
Q ss_pred HhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc-c-----cccHHHHHHhhhhhhhh
Q 043360 790 KEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS-A-----VGSLLPILKLGRCAYCN 854 (1108)
Q Consensus 790 q~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~-~-----f~~I~~li~~GR~~~~~ 854 (1108)
.++ .+.|+|+|| +.||.+|++.|+++++++ ++.+.+++.||+++. . +..+.+.+...+..+.+
T Consensus 133 ~~~lg~~~~~~~~vGD-s~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~~~~~~~~ 205 (211)
T 3ij5_A 133 LATLQCQPEQVAYIGD-DLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRGAVREVCDLILLAQDKLEG 205 (211)
T ss_dssp HHHHTCCGGGEEEEEC-SGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTTCTTT
T ss_pred HHHcCcCcceEEEEcC-CHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCcHHHHHHHHHHHHcCcHHH
Confidence 665 578999999 999999999999999999 688889999999998 2 45666666655554443
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.91 E-value=2.5e-09 Score=111.83 Aligned_cols=122 Identities=14% Similarity=0.131 Sum_probs=99.5
Q ss_pred HHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceeccc--CHhhHHHHHH
Q 043360 710 TVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC--LADDKLLLVQ 787 (1108)
Q Consensus 710 aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~--sP~~K~~iV~ 787 (1108)
+|+.|+++|+++.++||+....+..+++++|+.. ++... .|+-...+++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-----------------------------~~~~~kpk~~~~~~~~~ 104 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-----------------------------YYKGQVDKRSAYQHLKK 104 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------EECSCSSCHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------ceeCCCChHHHHHHHHH
Confidence 6999999999999999999999999999999975 34433 3444444555
Q ss_pred HHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhcc------cccHHHHHHhhhhhhhhhhhhhhh
Q 043360 788 SVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISA------VGSLLPILKLGRCAYCNIQKFTKL 861 (1108)
Q Consensus 788 ~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~~------f~~I~~li~~GR~~~~~i~k~i~~ 861 (1108)
.+.-..+.++|+|| +.||.+|++.|+++++|+ ++.+.+++.||+++.+ +..+.+.+...|..+.++.+.+.+
T Consensus 105 ~~~~~~~~~~~vGD-~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~ 182 (191)
T 3n1u_A 105 TLGLNDDEFAYIGD-DLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLK 182 (191)
T ss_dssp HHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HhCCCHHHEEEECC-CHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHh
Confidence 54444567999999 999999999999999999 7889999999999983 666777778888888887776655
Q ss_pred H
Q 043360 862 Q 862 (1108)
Q Consensus 862 ~ 862 (1108)
+
T Consensus 183 ~ 183 (191)
T 3n1u_A 183 Q 183 (191)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.1e-09 Score=110.70 Aligned_cols=112 Identities=16% Similarity=0.214 Sum_probs=89.8
Q ss_pred HHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHH
Q 043360 710 TVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSV 789 (1108)
Q Consensus 710 aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~l 789 (1108)
+++.|+++|+++.++||+....+..+++++|+. +++.. ..|...++.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------~~~~~--~~k~~~l~~~ 94 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------VLHGI--DRKDLALKQW 94 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------EEESC--SCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------eEeCC--CChHHHHHHH
Confidence 899999999999999999999999999999985 12222 5677777766
Q ss_pred HhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhcc------cccHHHHHHhhhhhhhhh
Q 043360 790 KEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISA------VGSLLPILKLGRCAYCNI 855 (1108)
Q Consensus 790 q~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~~------f~~I~~li~~GR~~~~~i 855 (1108)
.++ .+.++|+|| +.||.+|++.|++|++|+ ++.+.+++.||+++.+ +..+.+.+...|..+.+.
T Consensus 95 ~~~~~~~~~~~~~vGD-~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~~~~~~~~~~ 168 (176)
T 3mmz_A 95 CEEQGIAPERVLYVGN-DVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREIASWILGPSLDSLDK 168 (176)
T ss_dssp HHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTTTTC----
T ss_pred HHHcCCCHHHEEEEcC-CHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCccccc
Confidence 554 367999999 999999999999999999 6899999999999984 666666666655555444
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.83 E-value=4e-09 Score=113.33 Aligned_cols=141 Identities=18% Similarity=0.216 Sum_probs=100.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC---CCCcccc--chhhh-hh-------------------
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIAL--EGEQF-RE------------------- 758 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~---~~~~~vi--~G~~l-~~------------------- 758 (1108)
.+++.++|++|+++|+++.++||+....+..+++++|+..+ .++..+. +|+.+ ..
T Consensus 24 ~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~~~ 103 (227)
T 1l6r_A 24 STKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMR 103 (227)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCB
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhcCC
Confidence 67899999999999999999999999999999999998542 1122222 23222 00
Q ss_pred ------------------cCHHHHHHHhc--cccee-----cccCH--hhHHHHHHHHHhC-C---CEEEEEeCCCCCCH
Q 043360 759 ------------------LNSTERMAKLD--SMTLM-----GSCLA--DDKLLLVQSVKEK-G---HVVAFFGGSSTRDT 807 (1108)
Q Consensus 759 ------------------l~~~~~~~~~~--~~~V~-----ar~sP--~~K~~iV~~lq~~-g---~~Va~iGD~G~ND~ 807 (1108)
..++++.++.+ .+.+. ....| .+|...++.+.+. | +.|+++|| +.||.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD-~~nD~ 182 (227)
T 1l6r_A 104 SILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGD-SNNDM 182 (227)
T ss_dssp CCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECC-SGGGH
T ss_pred ccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECC-cHHhH
Confidence 01122222211 12221 12334 5899988888765 3 56999999 99999
Q ss_pred HHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 808 PALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 808 ~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
+|++.|++|++|| ++.+..|+.||+++. +-..+.++++
T Consensus 183 ~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 183 PMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp HHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999 789999999999987 4456666654
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=5.1e-09 Score=106.02 Aligned_cols=116 Identities=16% Similarity=0.138 Sum_probs=90.5
Q ss_pred HHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHH
Q 043360 709 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQS 788 (1108)
Q Consensus 709 ~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~ 788 (1108)
.+++.|+++|+++.++||++...+..+++++|+.. ++... ..|...++.
T Consensus 38 ~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-----------------------------~~~~~--kpk~~~~~~ 86 (164)
T 3e8m_A 38 AGIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY-----------------------------LFQGV--VDKLSAAEE 86 (164)
T ss_dssp HHHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE-----------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE-----------------------------eeccc--CChHHHHHH
Confidence 38999999999999999999999999999999975 34333 345555555
Q ss_pred HHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--c----cccHHHHHHhhhhhhhhhhhh
Q 043360 789 VKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--A----VGSLLPILKLGRCAYCNIQKF 858 (1108)
Q Consensus 789 lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~----f~~I~~li~~GR~~~~~i~k~ 858 (1108)
+.++ .+.++|+|| +.||.+|++.|+++++++ ++.+.+++.||+++. + +..+.+.+. +..|..+.++
T Consensus 87 ~~~~~~~~~~~~~~vGD-~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll--~~~~~~~~~~ 162 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGD-DLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVEKVL--GINLEDFIAV 162 (164)
T ss_dssp HHHHHTCCGGGEEEECC-SGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT--TCCHHHHHHH
T ss_pred HHHHcCCCHHHEEEECC-CHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHHHHH--ccCchhhHHh
Confidence 4433 357999999 999999999999999998 799999999999998 3 555666654 3334444444
Q ss_pred h
Q 043360 859 T 859 (1108)
Q Consensus 859 i 859 (1108)
+
T Consensus 163 ~ 163 (164)
T 3e8m_A 163 I 163 (164)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.77 E-value=7.2e-09 Score=106.04 Aligned_cols=103 Identities=17% Similarity=0.237 Sum_probs=83.7
Q ss_pred eeeEEEecccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHH--HcCCCCCCCCccccchhhhhhcCHHHHHHHhcccce
Q 043360 696 HLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVAC--ELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTL 773 (1108)
Q Consensus 696 ~llG~i~ir~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~--~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V 773 (1108)
..++.+.+|++ .+|+.|+++|+++.|+||+ ..+..+++ .+|+. +
T Consensus 32 ~~~~~f~~~D~--~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------------~ 77 (168)
T 3ewi_A 32 KEIISYDVKDA--IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------------T 77 (168)
T ss_dssp CCEEEEEHHHH--HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC------------------------------E
T ss_pred CEEEEEecCcH--HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE------------------------------E
Confidence 45555555665 3899999999999999999 77888888 55653 1
Q ss_pred ecccCHhhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc
Q 043360 774 MGSCLADDKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 836 (1108)
Q Consensus 774 ~ar~sP~~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~ 836 (1108)
+. .+++|...++.+.++ .+.++|+|| +.||.+|++.|+++++|+ ++.+.+++.||+++.
T Consensus 78 ~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD-~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~ 140 (168)
T 3ewi_A 78 EV--SVSDKLATVDEWRKEMGLCWKEVAYLGN-EVSDEECLKRVGLSAVPA-DACSGAQKAVGYICK 140 (168)
T ss_dssp EC--SCSCHHHHHHHHHHHTTCCGGGEEEECC-SGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECS
T ss_pred EE--CCCChHHHHHHHHHHcCcChHHEEEEeC-CHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeC
Confidence 21 135788888777655 357999999 999999999999999999 899999999999998
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.68 E-value=2.1e-08 Score=113.92 Aligned_cols=159 Identities=14% Similarity=0.097 Sum_probs=107.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchh------------------hhhhcCHHHHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGE------------------QFRELNSTERM 765 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~------------------~l~~l~~~~~~ 765 (1108)
++++.+.++.|++ |+.+.++|||+...+..+.+.+++...- ....+..+ .+....++++
T Consensus 105 ~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~l- 181 (332)
T 1y8a_A 105 VPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGEL-HGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELF- 181 (332)
T ss_dssp CTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEE-EEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHH-
T ss_pred HHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhh-cccccchhhhccccccceeEEecCHHHHhhhhHHHH-
Confidence 8999999999999 9999999999977777888888874210 00001100 1110001122
Q ss_pred HHhccc------ceec----ccCHhhHHHHHHHHHhCC--CEEEEEeCCCCCCHHHHhhC----CccEecCCCccHHHHh
Q 043360 766 AKLDSM------TLMG----SCLADDKLLLVQSVKEKG--HVVAFFGGSSTRDTPALKEA----DVGITEENKCTEMARE 829 (1108)
Q Consensus 766 ~~~~~~------~V~a----r~sP~~K~~iV~~lq~~g--~~Va~iGD~G~ND~~aLk~A----dVGIamg~~gte~ak~ 829 (1108)
+.++++ ..+. -..+.+|...++.++... +.|+++|| |.||++|++.| ++|||| ++.+.+|+
T Consensus 182 ~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GD-s~NDi~ml~~A~~~~g~~vam--na~~~lk~ 258 (332)
T 1y8a_A 182 RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGD-SISDYKMFEAARGLGGVAIAF--NGNEYALK 258 (332)
T ss_dssp HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEEC-SGGGHHHHHHHHHTTCEEEEE--SCCHHHHT
T ss_pred HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeC-cHhHHHHHHHHhhcCCeEEEe--cCCHHHHh
Confidence 211110 0011 123567998888776543 56999999 99999999999 999999 68999999
Q ss_pred ccchhhc--cccc----HHHHHHhhhhhhhhhhh-------hhhhHhhcchhh
Q 043360 830 CSDIVIS--AVGS----LLPILKLGRCAYCNIQK-------FTKLQLTGCASG 869 (1108)
Q Consensus 830 aADivl~--~f~~----I~~li~~GR~~~~~i~k-------~i~~~l~~ni~~ 869 (1108)
+||+++. +... |.+.+..||..+ ++.+ ++.+....|.-.
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 310 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLSAVSIPETEIYIMENSDFGE 310 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGGGCCCTTCEEEEGGGSCHHH
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHHhhccCCCceEEecCCCHHH
Confidence 9999987 4533 444467899888 7666 666666655543
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.53 E-value=1.2e-07 Score=104.38 Aligned_cols=64 Identities=20% Similarity=0.296 Sum_probs=53.7
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
.|...++.+.++ | +.|+++|| +.||.+|++.|++|+||| ++.+.+|++||+++. +=..+.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD-~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGD-GYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIE 266 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECC-ChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHH
Confidence 688777777654 3 46999999 999999999999999999 899999999999988 5556666653
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.5e-07 Score=110.42 Aligned_cols=134 Identities=20% Similarity=0.213 Sum_probs=102.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCcc-ccchhhhhhcCHHHHHHHhcccceec-ccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI-ALEGEQFRELNSTERMAKLDSMTLMG-SCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~-vi~G~~l~~l~~~~~~~~~~~~~V~a-r~sP~~ 781 (1108)
.|++.+.++.|++.|+++.++||.....+..+++++|+...-...+ +.+|.--. .+.. -..++.
T Consensus 258 ~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg--------------~~~~~v~~~kp 323 (415)
T 3p96_A 258 MPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTG--------------RVVGPIIDRAG 323 (415)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEE--------------EECSSCCCHHH
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEe--------------eEccCCCCCcc
Confidence 8999999999999999999999999999999999999963100000 01110000 0111 123677
Q ss_pred HHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhhhhhhh
Q 043360 782 KLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGRCAYCN 854 (1108)
Q Consensus 782 K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR~~~~~ 854 (1108)
|.++++.+.++ | +.+.|+|| |.||.+|++.|++|+++ ++.+..++.||+++. ++..+..++..+|.-+..
T Consensus 324 k~~~~~~~~~~~gi~~~~~i~vGD-~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~~ 399 (415)
T 3p96_A 324 KATALREFAQRAGVPMAQTVAVGD-GANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGEIEA 399 (415)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHHH
T ss_pred hHHHHHHHHHHcCcChhhEEEEEC-CHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHHH
Confidence 88877776554 3 57999999 99999999999999999 578888899999988 999999999888776554
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.47 E-value=3.3e-07 Score=101.37 Aligned_cols=65 Identities=18% Similarity=0.193 Sum_probs=53.5
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 780 DDKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 780 ~~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
..|...++.+.++ | +.|+++|| +.||.+|++.|++|+||| ++.+..|++||++.. +=..+.++|+
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD-~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGH-QYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECC-chhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 3587777777655 3 46999999 999999999999999999 899999999999988 4445666654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.47 E-value=1.3e-07 Score=99.14 Aligned_cols=130 Identities=16% Similarity=0.121 Sum_probs=92.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecc-cCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS-CLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar-~sP~~K 782 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++...+- .+ ...+... .....|
T Consensus 77 ~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~----------~~-~~~~~~~~~~~k~k 143 (217)
T 3m1y_A 77 FEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAA--FSNTLIVEND----------AL-NGLVTGHMMFSHSK 143 (217)
T ss_dssp CBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEE--EEEEEEEETT----------EE-EEEEEESCCSTTHH
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchh--ccceeEEeCC----------EE-EeeeccCCCCCCCh
Confidence 89999999999999999999999999999999999998642 1111100000 00 0000000 123556
Q ss_pred HHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhhh
Q 043360 783 LLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLGR 849 (1108)
Q Consensus 783 ~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~GR 849 (1108)
...++.+.+. ...++++|| +.||.+|++.|+++++| ++.+..++.||+++. ++..+..++.|-+
T Consensus 144 ~~~~~~~~~~~g~~~~~~i~vGD-s~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~~ 213 (217)
T 3m1y_A 144 GEMLLVLQRLLNISKTNTLVVGD-GANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGHH 213 (217)
T ss_dssp HHHHHHHHHHHTCCSTTEEEEEC-SGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC-----
T ss_pred HHHHHHHHHHcCCCHhHEEEEeC-CHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcccc
Confidence 6666665544 356899999 99999999999999999 578888899999998 8888888876543
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.45 E-value=3.9e-07 Score=100.20 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=46.0
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPIL 845 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li 845 (1108)
+|...++.+.+. | +.|+++|| +.||.+|++.|++|+||| ++.+..|++||++.. +=..+.++|
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD-~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i 265 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGD-QGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAI 265 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC---CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECC-chhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHH
Confidence 488877777655 3 46999999 999999999999999999 899999999999987 555666665
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.43 E-value=2e-07 Score=105.16 Aligned_cols=128 Identities=14% Similarity=0.166 Sum_probs=92.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceec-ccCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG-SCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~a-r~sP~~K 782 (1108)
.|++.+.++.|+++|+++.++||.....+..+.+++|+...-...+..++..+.. .+.. -..++.|
T Consensus 181 ~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg-------------~i~~~~~~~kpk 247 (317)
T 4eze_A 181 SPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTD-------------NITLPIMNAANK 247 (317)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEE-------------EECSSCCCHHHH
T ss_pred CcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeee-------------eEecccCCCCCC
Confidence 8999999999999999999999999999999999999964200000000000000 0111 1234667
Q ss_pred HHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHh
Q 043360 783 LLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKL 847 (1108)
Q Consensus 783 ~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~ 847 (1108)
.++++.+.++ .+.+.|+|| +.||.+|++.|++|++++ +.+..++.||.++. ++..+..++.+
T Consensus 248 p~~~~~~~~~lgv~~~~~i~VGD-s~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~~ 315 (317)
T 4eze_A 248 KQTLVDLAARLNIATENIIACGD-GANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIED 315 (317)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTCS
T ss_pred HHHHHHHHHHcCCCcceEEEEeC-CHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHHh
Confidence 6766655443 357999999 999999999999999994 67777788888876 88887776643
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.4e-07 Score=99.15 Aligned_cols=65 Identities=20% Similarity=0.197 Sum_probs=52.6
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccch--hhc--ccccHHHHHH
Q 043360 780 DDKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI--VIS--AVGSLLPILK 846 (1108)
Q Consensus 780 ~~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADi--vl~--~f~~I~~li~ 846 (1108)
..|..-++.+.+. | +.|+++|| +.||.+|++.|++||||| ++.+..|++||+ +.. +=..+.++|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD-~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGD-GMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECC-cHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 3588877777655 3 46999999 999999999999999999 899999999995 443 5556666654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.40 E-value=4.8e-08 Score=100.88 Aligned_cols=117 Identities=21% Similarity=0.293 Sum_probs=89.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
+|++.+.++.|++.|+++.++|++....+..+ +.+|+... ..........+ --....|.+|.
T Consensus 81 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~----------------~~~~~~~~~k~ 142 (201)
T 4ap9_A 81 SPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFEDGKF----------------QGIRLRFRDKG 142 (201)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEETTEE----------------EEEECCSSCHH
T ss_pred ChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEeeCCce----------------ECCcCCccCHH
Confidence 89999999999999999999999999888888 88887431 00111011000 00244567899
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~~f~~I~~li~ 846 (1108)
..++.+ ..+.+.++|| +.||.+|++.|++|++|+ ++.+ .||+++.++..+.+++.
T Consensus 143 ~~l~~l--~~~~~i~iGD-~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~~~~el~~~l~ 197 (201)
T 4ap9_A 143 EFLKRF--RDGFILAMGD-GYADAKMFERADMGIAVG-REIP----GADLLVKDLKELVDFIK 197 (201)
T ss_dssp HHHGGG--TTSCEEEEEC-TTCCHHHHHHCSEEEEES-SCCT----TCSEEESSHHHHHHHHH
T ss_pred HHHHhc--CcCcEEEEeC-CHHHHHHHHhCCceEEEC-CCCc----cccEEEccHHHHHHHHH
Confidence 888888 5567889999 999999999999999999 5555 78999888877777664
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=4.6e-07 Score=94.09 Aligned_cols=96 Identities=16% Similarity=0.258 Sum_probs=79.1
Q ss_pred HHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHH
Q 043360 709 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQS 788 (1108)
Q Consensus 709 ~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~ 788 (1108)
.+++.|+++|+++.++||+....+..+++++|+.. ++... ..|...++.
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-----------------------------~~~~~--kpk~~~~~~ 108 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-----------------------------LYQGQ--SNKLIAFSD 108 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------EECSC--SCSHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-----------------------------eecCC--CCCHHHHHH
Confidence 48999999999999999999999999999999864 33333 334555555
Q ss_pred HHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhcc
Q 043360 789 VKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISA 837 (1108)
Q Consensus 789 lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~~ 837 (1108)
+.++ | +.++|+|| +.||.+|++.|+++++++ ++.+.+++.||+++.+
T Consensus 109 ~~~~~g~~~~~~~~iGD-~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~ 159 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGD-DLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRI 159 (188)
T ss_dssp HHHHHTCCGGGEEEEES-SGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSS
T ss_pred HHHHcCCCHHHEEEECC-CHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeC
Confidence 5433 4 57999999 999999999999999998 6777778889999983
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.37 E-value=3.1e-07 Score=97.67 Aligned_cols=127 Identities=13% Similarity=0.131 Sum_probs=92.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.++... ...-.|+--.
T Consensus 106 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 167 (237)
T 4ex6_A 106 YPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTR--LTVIAGDDSVE----------------RGKPHPDMAL 167 (237)
T ss_dssp CTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGT--CSEEECTTTSS----------------SCTTSSHHHH
T ss_pred CCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhh--eeeEEeCCCCC----------------CCCCCHHHHH
Confidence 89999999999999999999999999999999999998642 22233332110 1111223233
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc---cEecCCCccHHHHh-ccchhhcccccHHHHHHhhh
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADV---GITEENKCTEMARE-CSDIVISAVGSLLPILKLGR 849 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV---GIamg~~gte~ak~-aADivl~~f~~I~~li~~GR 849 (1108)
.+.+.+.-..+.++++|| +.||+.|++.|++ +|+||.+..+..++ .||+++.++..|.+++..|+
T Consensus 168 ~~~~~lg~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 168 HVARGLGIPPERCVVIGD-GVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHHHHC-
T ss_pred HHHHHcCCCHHHeEEEcC-CHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHHHccC
Confidence 344444333467999999 9999999999999 99998544344444 79999999999999887764
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=4.2e-07 Score=94.48 Aligned_cols=124 Identities=22% Similarity=0.280 Sum_probs=86.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecc-cCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS-CLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar-~sP~~K 782 (1108)
.|++.++++.|++.|+++.++||+....+..+.+.+|+...-......... .+ .-.+... ..+..|
T Consensus 78 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~~~~~~~~K 144 (211)
T 1l7m_A 78 TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG------------KL-TGDVEGEVLKENAK 144 (211)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT------------EE-EEEEECSSCSTTHH
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC------------EE-cCCcccCccCCccH
Confidence 689999999999999999999999999888888888874210000000000 00 0001111 224577
Q ss_pred HHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhcc--cccHHH
Q 043360 783 LLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISA--VGSLLP 843 (1108)
Q Consensus 783 ~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~~--f~~I~~ 843 (1108)
...++.+.++ | +.++++|| +.||.+|++.|+++++|+ +.+..+..||+++.+ +..+..
T Consensus 145 ~~~l~~~~~~lgi~~~~~~~iGD-~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 145 GEILEKIAKIEGINLEDTVAVGD-GANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred HHHHHHHHHHcCCCHHHEEEEec-ChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 6666555443 3 46999999 999999999999999998 556667889998874 776643
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.3e-06 Score=87.92 Aligned_cols=101 Identities=14% Similarity=0.200 Sum_probs=80.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.+++.++++.|+++|+++.++||.....+..+.+++|+.. .|.... .|.
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-----------------------------~~~~~k--p~~ 86 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-----------------------------IYTGSY--KKL 86 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE-----------------------------EEECC----CH
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh-----------------------------hccCCC--CCH
Confidence 6788999999999999999999999999999999999864 232222 233
Q ss_pred HHHH-HHHhC---CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhcc
Q 043360 784 LLVQ-SVKEK---GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISA 837 (1108)
Q Consensus 784 ~iV~-~lq~~---g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~~ 837 (1108)
..++ .+++. .+.++|+|| +.||.+|.+.|+++++++ ++.+..++.||+++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vGD-~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~ 142 (162)
T 2p9j_A 87 EIYEKIKEKYSLKDEEIGFIGD-DVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQR 142 (162)
T ss_dssp HHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSS
T ss_pred HHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecC
Confidence 3333 23333 357999999 999999999999999988 6788888899999883
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.8e-06 Score=92.54 Aligned_cols=141 Identities=16% Similarity=0.177 Sum_probs=95.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC---CCCccccc-hhh---------------hh-h-----
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALE-GEQ---------------FR-E----- 758 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~---~~~~~vi~-G~~---------------l~-~----- 758 (1108)
.+.+.+++++++++|+++.++||.....+..+.+.+|+..+ .++..+.+ |+. ++ .
T Consensus 22 ~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~ 101 (231)
T 1wr8_A 22 HEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNAR 101 (231)
T ss_dssp CHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTTCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCCce
Confidence 67789999999999999999999999999999999987532 01111111 110 00 0
Q ss_pred ------------------cCHHHHHHHhcc----ccee-----cccCH--hhHHHHHHHHHhC-C---CEEEEEeCCCCC
Q 043360 759 ------------------LNSTERMAKLDS----MTLM-----GSCLA--DDKLLLVQSVKEK-G---HVVAFFGGSSTR 805 (1108)
Q Consensus 759 ------------------l~~~~~~~~~~~----~~V~-----ar~sP--~~K~~iV~~lq~~-g---~~Va~iGD~G~N 805 (1108)
...+.+.++.++ +.+. ....| ..|...++.+.++ | +.|+++|| +.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD-~~n 180 (231)
T 1wr8_A 102 TSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD-GEN 180 (231)
T ss_dssp BCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC-SGG
T ss_pred EEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECC-CHH
Confidence 022222222221 2222 12223 3688888777654 3 56899999 999
Q ss_pred CHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 806 DTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 806 D~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
|.+|++.|++|++|+ ++.+..++.||+++. +-..+.++++
T Consensus 181 D~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 181 DLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 999999999999999 788888889999987 3334665554
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.1e-06 Score=97.28 Aligned_cols=64 Identities=16% Similarity=0.235 Sum_probs=54.2
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
.|...++.+.+. | +.|+++|| +.||.+|++.|++||||| ++.+..|++||++.. +=..+.++|+
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD-~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGD-NLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECC-CHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 588888877655 3 46999999 999999999999999999 899999999999987 5556766664
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=7.2e-07 Score=93.03 Aligned_cols=128 Identities=12% Similarity=0.007 Sum_probs=92.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-....++.++. ....-.|+--.
T Consensus 72 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-----------------~~~kp~~~~~~ 134 (205)
T 3m9l_A 72 APGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-----------------APPKPHPGGLL 134 (205)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-----------------SCCTTSSHHHH
T ss_pred CccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-----------------CCCCCCHHHHH
Confidence 8999999999999999999999999999999999999854200011221110 01111121112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-cEecCCCccHHHHhccchhhcccccHHHHHHhhhh
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADV-GITEENKCTEMARECSDIVISAVGSLLPILKLGRC 850 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV-GIamg~~gte~ak~aADivl~~f~~I~~li~~GR~ 850 (1108)
.+.+.+.-..+.++++|| +.||..|.+.|++ +|+|+ +|.+..++.||+++.++..|...+...|.
T Consensus 135 ~~~~~~g~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 135 KLAEAWDVSPSRMVMVGD-YRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHARDCAQLRDLLSAEGH 200 (205)
T ss_dssp HHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECSSHHHHHHHHHHTTC
T ss_pred HHHHHcCCCHHHEEEECC-CHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeCCHHHHHHHHHhccc
Confidence 222222222356999999 9999999999999 99999 66666678899999999999998876554
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=8.1e-06 Score=81.96 Aligned_cols=137 Identities=16% Similarity=0.200 Sum_probs=86.6
Q ss_pred ccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHc-CCChhhhcccce
Q 043360 521 VTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSR-SLNVEFVDQNLS 599 (1108)
Q Consensus 521 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~-g~~~~~~~~~~~ 599 (1108)
..||+|-|++++..+...+. +++ ++++++...+ +..+.||..+|++++|++. +.......+.
T Consensus 13 ~~~tit~gnr~vt~v~~~~g-~~e-------~elL~lAAs~-------E~~SeHPla~AIv~~A~~~~~l~~~~~~~~-- 75 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG-VDE-------KTLADAAQLA-------SLADETPEGRSIVILAKQRFNLRERDVQSL-- 75 (156)
T ss_dssp --------CEEEEEEEECTT-SCH-------HHHHHHHHHT-------TSSCCSHHHHHHHHHHHHHTTCCCCCHHHH--
T ss_pred CCCceecCCCeEEEEEecCC-CCH-------HHHHHHHHHH-------hCcCCCHHHHHHHHHHHHhcCCCccccccc--
Confidence 47999999999999976432 111 2344333222 4668999999999999976 6543221000
Q ss_pred eeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHHHHhCCCeEEE
Q 043360 600 VLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIA 679 (1108)
Q Consensus 600 il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~ 679 (1108)
..+..+|++..++.+|.+ +|. -+.||+++.|.+.+... |. .....+.+.+++++.+|.++++
T Consensus 76 ~~~~~~F~a~~G~~Gv~v---~G~------~v~vGn~~~i~~l~~~~----gi-----~~~~~~~~~~~~la~~G~T~v~ 137 (156)
T 1svj_A 76 HATFVPFTAQSRMSGINI---DNR------MIRKGSVDAIRRHVEAN----GG-----HFPTDVDQKVDQVARQGATPLV 137 (156)
T ss_dssp TCEEEEEETTTTEEEEEE---TTE------EEEEEEHHHHHHHHHHH----TC-----CCCHHHHHHHHHHHHTTCEEEE
T ss_pred ccceeeccccCCCCeEEE---CCE------EEEEeCcHHHHHHHHHc----CC-----CCcHHHHHHHHHHHhCCCCEEE
Confidence 123578999888888844 453 35789988776665421 11 0113477788899999999999
Q ss_pred EEEecCcchhhhccCceeeEEEec
Q 043360 680 FACGQTEVSEIKENGLHLLALAGL 703 (1108)
Q Consensus 680 ~A~k~l~~~~~~E~~l~llG~i~i 703 (1108)
+|. |..++|++++
T Consensus 138 VA~-----------d~~l~GvIal 150 (156)
T 1svj_A 138 VVE-----------GSRVLGVIAL 150 (156)
T ss_dssp EEE-----------TTEEEEEEEE
T ss_pred EEE-----------CCEEEEEEEE
Confidence 998 4589999998
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.23 E-value=4.7e-06 Score=86.81 Aligned_cols=123 Identities=20% Similarity=0.110 Sum_probs=92.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceec--ccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG--SCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~a--r~sP~~ 781 (1108)
.|++.+.++.|++. +++.++|+.....+..+.+.+|+... ....+..+.+. ..-. .-.|+.
T Consensus 71 ~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~-f~~~~~~~~~~---------------~~~~~~~p~p~~ 133 (206)
T 1rku_A 71 LEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDDSD---------------RVVGYQLRQKDP 133 (206)
T ss_dssp CTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCE-EEEEEEECTTS---------------CEEEEECCSSSH
T ss_pred CccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcce-ecceeEEcCCc---------------eEEeeecCCCch
Confidence 89999999999999 99999999999999999999998742 00111111110 0001 256788
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchh-hcccccHHHHH
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIV-ISAVGSLLPIL 845 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADiv-l~~f~~I~~li 845 (1108)
|...++.+......++|+|| +.||++|.+.|+++++++ ...+..+.+++++ +.++..+.+++
T Consensus 134 ~~~~l~~l~~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 134 KRQSVIAFKSLYYRVIAAGD-SYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp HHHHHHHHHHTTCEEEEEEC-SSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEECSHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEeC-ChhhHHHHHhcCccEEEC-CcHHHHHHHhhhccccchHHHHHHH
Confidence 99999999888889999999 999999999999999985 3334443445554 44888777765
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.20 E-value=4.3e-06 Score=90.84 Aligned_cols=180 Identities=13% Similarity=0.122 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEEecCcc----hhhhccCceeeE--------------EEec-ccchHHHHHHHHHcCCE
Q 043360 660 KRRFQKLIKDMEDSGLRPIAFACGQTEV----SEIKENGLHLLA--------------LAGL-REEIKSTVEALRNAGVR 720 (1108)
Q Consensus 660 ~~~~~~~i~~~a~~GlR~L~~A~k~l~~----~~~~E~~l~llG--------------~i~i-r~~v~~aI~~l~~aGI~ 720 (1108)
.+...+.++++.++|.++....=|.... .+.+.-+. +++ --.+ ++++.+.++.+++.|+.
T Consensus 22 ~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~-~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~ 100 (258)
T 2pq0_A 22 PLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDS-FVSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKNGHP 100 (258)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCC-EEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCE-EEECCCCEEEECCEEEEEecCCHHHHHHHHHHHHhCCCe
Confidence 3456677888888998765444343321 11111111 121 1122 78899999999999999
Q ss_pred EEEecCCcH-------HHHHHHHHHcCCCCCC----------CCccccchhhhhhcCHHHHHHHhcccceecccCH----
Q 043360 721 IILVSEDEL-------LAVTEVACELGNFRPE----------SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA---- 779 (1108)
Q Consensus 721 v~mlTGD~~-------~tA~~IA~~~GI~~~~----------~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP---- 779 (1108)
+.+.|+|.. ..........+..... ...+++.+++- ..+++.+.++++.+ .+..|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~e 176 (258)
T 2pq0_A 101 LVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAE---EEEPYVRNYPEFRF-VRWHDVSTD 176 (258)
T ss_dssp EEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHH---HHHHHHHHCTTEEE-EEEETTEEE
T ss_pred EEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHH---HHHHHHHhCCCeEE-EEeCCceEE
Confidence 988887761 1111222233321100 00011111100 01112222333321 12222
Q ss_pred -----hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 780 -----DDKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 780 -----~~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
..|..-++.+.+. .+.|+++|| +.||.+|++.|++|+||| ++.+..|+.||++.. +-..+.++++
T Consensus 177 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD-s~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 177 VLPAGGSKAEGIRMMIEKLGIDKKDVYAFGD-GLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp EEESSCCHHHHHHHHHHHHTCCGGGEEEECC-SGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred EEECCCChHHHHHHHHHHhCCCHHHEEEECC-cHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 2688878777654 356999999 999999999999999999 899999999999987 6667777765
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.18 E-value=1e-06 Score=98.49 Aligned_cols=65 Identities=14% Similarity=0.177 Sum_probs=54.3
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 780 DDKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 780 ~~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
..|...++.+.++ | +.|+++|| +.||.+|++.|++||||| ++.+..|++||+++. +=..+.++|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GD-s~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGD-GGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECC-CHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4688777777654 3 46999999 999999999999999999 899999999999988 4455776664
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.17 E-value=2e-06 Score=89.58 Aligned_cols=128 Identities=18% Similarity=0.122 Sum_probs=89.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCC--CccccchhhhhhcCHHHHHHHhcccceecccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~--~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~ 781 (1108)
+|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ...+..+... ... ......+|..
T Consensus 84 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~ 151 (219)
T 3kd3_A 84 TDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS-----------FKE-LDNSNGACDS 151 (219)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB-----------EEE-EECTTSTTTC
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc-----------eec-cCCCCCCccc
Confidence 8999999999999999999999999999999999999853100 0011101000 000 0123445666
Q ss_pred HHHHHHHH-HhCCCEEEEEeCCCCCCHHHHhh----CCccEecCCCccHHHHhccchhhcccccHHHHH
Q 043360 782 KLLLVQSV-KEKGHVVAFFGGSSTRDTPALKE----ADVGITEENKCTEMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 782 K~~iV~~l-q~~g~~Va~iGD~G~ND~~aLk~----AdVGIamg~~gte~ak~aADivl~~f~~I~~li 845 (1108)
|.+.+... .-..+.++|+|| +.||.+|++. +.||++++ +..+..+..||+++.++..+.+++
T Consensus 152 ~~~~l~~~~~~~~~~~~~vGD-~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 152 KLSAFDKAKGLIDGEVIAIGD-GYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHHHHHHGGGCCSEEEEEES-SHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEESSHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEEC-CHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeCCHHHHHHhh
Confidence 76666554 334678999999 9999999976 34445555 466777888999988887777654
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.13 E-value=2.7e-05 Score=84.86 Aligned_cols=181 Identities=14% Similarity=0.221 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccCcee------------------eEEEec-ccchHHHHHHHHHcCCE
Q 043360 660 KRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHL------------------LALAGL-REEIKSTVEALRNAGVR 720 (1108)
Q Consensus 660 ~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~l------------------lG~i~i-r~~v~~aI~~l~~aGI~ 720 (1108)
.+...+.++++..+|.++....-|.......++ ++.+ +--..+ ++.+.+.++.+++.++.
T Consensus 32 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~-~l~~~~~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 110 (268)
T 3r4c_A 32 SQSSIDALKKVHDSGIKIVIATGRAASDLHEID-AVPYDGVIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREFDFA 110 (268)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCTTCCGGGT-TSCCCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHhHHHH-hcCCCcEEEeCCcEEEEcCCeEEEEecCCHHHHHHHHHHHHHcCcE
Confidence 456778889999999987776656543111111 1111 111122 77889999999999999
Q ss_pred EEEecCCcH------HHHHHHHHHcCCCCCCCCccccchh-hhhh---------cCHHHHHHHh---cccce------ec
Q 043360 721 IILVSEDEL------LAVTEVACELGNFRPESNDIALEGE-QFRE---------LNSTERMAKL---DSMTL------MG 775 (1108)
Q Consensus 721 v~mlTGD~~------~tA~~IA~~~GI~~~~~~~~vi~G~-~l~~---------l~~~~~~~~~---~~~~V------~a 775 (1108)
+.+.+.|.. .......+..+..... +-+-. ++.. ..++...++. +.+.+ +.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (268)
T 3r4c_A 111 VALELNEGVFVNRLTPTVEQIAGIVEHPVPP----VVDIEEMFERKECCQLCFYFDEEAEQKVMPLLSGLSATRWHPLFA 186 (268)
T ss_dssp EEEEETTEEEESCCCHHHHHHHHHHTCCCCC----BCCHHHHHHHSCCCCEEEECCHHHHHHHGGGCTTEEEEEEETTEE
T ss_pred EEEEECCEEEEeCCcHHHHHHHHHcCCCCCc----ccchHHHhccCceEEEEEecChHHHHHHHHhCCCcEEEEecCCeE
Confidence 888887753 1233344555554320 00000 1000 0112222222 22221 12
Q ss_pred ccCH--hhHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHh
Q 043360 776 SCLA--DDKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKL 847 (1108)
Q Consensus 776 r~sP--~~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~ 847 (1108)
...| ..|..-++.+.++ | +.|+++|| +.||.+|++.|++|+||| ++.+.+|++||++.. +=..+.+++++
T Consensus 187 ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD-~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 187 DVNVAGTSKATGLSLFADYYRVKVSEIMACGD-GGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred EEeeCCCCHHHHHHHHHHHcCCCHHHEEEECC-cHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 2333 4788888877665 3 46999999 999999999999999999 899999999999988 55667777643
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.12 E-value=9e-06 Score=88.69 Aligned_cols=183 Identities=13% Similarity=0.088 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEEecCcch----hhhccCc-------------eeeEEEec-ccchHHHHHHHHHcCCEE
Q 043360 660 KRRFQKLIKDMEDSGLRPIAFACGQTEVS----EIKENGL-------------HLLALAGL-REEIKSTVEALRNAGVRI 721 (1108)
Q Consensus 660 ~~~~~~~i~~~a~~GlR~L~~A~k~l~~~----~~~E~~l-------------~llG~i~i-r~~v~~aI~~l~~aGI~v 721 (1108)
.+...+.++++..+|.++....-|..... +.+.-+. ..+---.+ ++.+.+.++.+++.++.+
T Consensus 24 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 103 (274)
T 3fzq_A 24 PESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREVAF 103 (274)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEEECCCCHHHHHHHHHHHHHHTCEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEEEcCCCHHHHHHHHHHHHHCCceE
Confidence 45677888888999988776655554311 1111110 11111122 778899999999999999
Q ss_pred EEecCCcHHHHHH----HHHHc---------------C-C--CC-------CCCCccccchhhhhhcCHHHHHHHhcccc
Q 043360 722 ILVSEDELLAVTE----VACEL---------------G-N--FR-------PESNDIALEGEQFRELNSTERMAKLDSMT 772 (1108)
Q Consensus 722 ~mlTGD~~~tA~~----IA~~~---------------G-I--~~-------~~~~~~vi~G~~l~~l~~~~~~~~~~~~~ 772 (1108)
.+.|.|...+... +.+.. . . .. .+...+++.... . .-+++.+.+...-
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~-~--~~~~~~~~l~~~~ 180 (274)
T 3fzq_A 104 SIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLWSNE-K--VFDEVKDILQDKM 180 (274)
T ss_dssp EEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSSCCCCEEEEECCH-H--HHHHHHHHHGGGE
T ss_pred EEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcccCeEEEEEEcCH-H--HHHHHHHHhhcce
Confidence 8888876322111 11100 0 0 00 000001111000 0 0112222222211
Q ss_pred eecc---------cCH--hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc-
Q 043360 773 LMGS---------CLA--DDKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS- 836 (1108)
Q Consensus 773 V~ar---------~sP--~~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~- 836 (1108)
.+.+ ..| ..|...++.+.++ .+.++++|| +.||.+|++.|++||||| ++.+..|++||++..
T Consensus 181 ~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD-~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~ 258 (274)
T 3fzq_A 181 ELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGD-GQNDIVMFQASDVTIAMK-NSHQQLKDIATSICED 258 (274)
T ss_dssp EEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECC-SGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECC
T ss_pred EEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECC-ChhHHHHHHhcCceEEec-CccHHHHHhhhheeCC
Confidence 1122 223 3588877777654 356999999 999999999999999999 899999999999988
Q ss_pred -ccccHHHHHHh
Q 043360 837 -AVGSLLPILKL 847 (1108)
Q Consensus 837 -~f~~I~~li~~ 847 (1108)
+=..+.++|++
T Consensus 259 ~~edGv~~~l~~ 270 (274)
T 3fzq_A 259 IFDNGIYKELKR 270 (274)
T ss_dssp GGGTHHHHHHHH
T ss_pred CchhHHHHHHHH
Confidence 55567777643
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.10 E-value=2.7e-06 Score=89.70 Aligned_cols=128 Identities=12% Similarity=-0.015 Sum_probs=90.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.+++.+.++.|++.|+++.++|+.....+..+.+..|+... ...++.+++.. ...-.|+--.
T Consensus 93 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 154 (233)
T 3s6j_A 93 LPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDIN--KINIVTRDDVS----------------YGKPDPDLFL 154 (233)
T ss_dssp CTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTT--SSCEECGGGSS----------------CCTTSTHHHH
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhh--hheeeccccCC----------------CCCCChHHHH
Confidence 89999999999999999999999999999999999998753 23333333211 0111122112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc---cEecCCCccHHHHhc-cchhhcccccHHHHHHhhhh
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADV---GITEENKCTEMAREC-SDIVISAVGSLLPILKLGRC 850 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV---GIamg~~gte~ak~a-ADivl~~f~~I~~li~~GR~ 850 (1108)
.+.+.+.-..+.++++|| +.||..|++.|++ +|++|.+..+..++. ||+++.++..|..++.....
T Consensus 155 ~~~~~l~~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 224 (233)
T 3s6j_A 155 AAAKKIGAPIDECLVIGD-AIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLDEIAS 224 (233)
T ss_dssp HHHHHTTCCGGGEEEEES-SHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGGGTCC
T ss_pred HHHHHhCCCHHHEEEEeC-CHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHHHHhh
Confidence 222222212356999999 9999999999999 777775555555554 99999999999988866533
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.09 E-value=4.6e-06 Score=92.22 Aligned_cols=64 Identities=17% Similarity=0.262 Sum_probs=53.0
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
.|...++.+.+. | ..++++|| +.||.+|++.|++|++|| ++.+..++.||+++. +-..+.++++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD-~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGD-QENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECC-cHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 688888877654 2 46999999 999999999999999999 788888899999987 4455666654
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.09 E-value=2.2e-06 Score=90.30 Aligned_cols=122 Identities=12% Similarity=0.126 Sum_probs=88.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.++.. .. ...|.
T Consensus 88 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~------------------~~--~kp~~ 145 (226)
T 3mc1_A 88 YDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFY--FDAIVGSSLD------------------GK--LSTKE 145 (226)
T ss_dssp CTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECTT------------------SS--SCSHH
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhh--eeeeeccCCC------------------CC--CCCCH
Confidence 89999999999999999999999999999999999998642 1222222111 11 11233
Q ss_pred HHHHHHHh----CCCEEEEEeCCCCCCHHHHhhCCc---cEecCCCccHH-HHhccchhhcccccHHHHHHhh
Q 043360 784 LLVQSVKE----KGHVVAFFGGSSTRDTPALKEADV---GITEENKCTEM-ARECSDIVISAVGSLLPILKLG 848 (1108)
Q Consensus 784 ~iV~~lq~----~g~~Va~iGD~G~ND~~aLk~AdV---GIamg~~gte~-ak~aADivl~~f~~I~~li~~G 848 (1108)
..++.+.+ ..+.++++|| +.||..|.+.|++ +|++|....+. .+..||+++.++..+.+++..-
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~~~ 217 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGD-REYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKILEL 217 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEES-SHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHHTC
T ss_pred HHHHHHHHHhCcCcccEEEECC-CHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHHHH
Confidence 33333322 2357999999 9999999999999 88888433333 3688999999888888887543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.00 E-value=8.4e-06 Score=88.38 Aligned_cols=126 Identities=14% Similarity=0.083 Sum_probs=86.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.+++.+.++.|++.|+++.++|++....+..+.+.+|+... ....++.++... ...-.|+--.
T Consensus 105 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~----------------~~kp~~~~~~ 167 (267)
T 1swv_A 105 INGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGY-KPDFLVTPDDVP----------------AGRPYPWMCY 167 (267)
T ss_dssp CTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTC-CCSCCBCGGGSS----------------CCTTSSHHHH
T ss_pred CccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCccc-ChHheecCCccC----------------CCCCCHHHHH
Confidence 78999999999999999999999999888888888876532 012233332210 1112233333
Q ss_pred HHHHHHHhCC-CEEEEEeCCCCCCHHHHhhCC---ccEecCCCc-----------------------cHHHHhc-cchhh
Q 043360 784 LLVQSVKEKG-HVVAFFGGSSTRDTPALKEAD---VGITEENKC-----------------------TEMAREC-SDIVI 835 (1108)
Q Consensus 784 ~iV~~lq~~g-~~Va~iGD~G~ND~~aLk~Ad---VGIamg~~g-----------------------te~ak~a-ADivl 835 (1108)
.+.+.+.-.. +.++++|| +.||..|++.|+ +++++|... .+..++. ||+++
T Consensus 168 ~~~~~lgi~~~~~~i~iGD-~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~ 246 (267)
T 1swv_A 168 KNAMELGVYPMNHMIKVGD-TVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI 246 (267)
T ss_dssp HHHHHHTCCSGGGEEEEES-SHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHhCCCCCcCEEEEeC-CHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceec
Confidence 3444443334 67999999 999999999999 678787321 2333344 99999
Q ss_pred cccccHHHHHHh
Q 043360 836 SAVGSLLPILKL 847 (1108)
Q Consensus 836 ~~f~~I~~li~~ 847 (1108)
.++..+..++..
T Consensus 247 ~~~~el~~~l~~ 258 (267)
T 1swv_A 247 ETMQELESVMEH 258 (267)
T ss_dssp SSGGGHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 888888887643
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.99 E-value=4.8e-06 Score=88.06 Aligned_cols=125 Identities=20% Similarity=0.161 Sum_probs=86.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccc--------cchhhhhhcCHHHHHHHhcccceec
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIA--------LEGEQFRELNSTERMAKLDSMTLMG 775 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~v--------i~G~~l~~l~~~~~~~~~~~~~V~a 775 (1108)
.|++.++++.|+++|+++.++|+.....+..+.+.+|+.....-..+ +.|.+. ...
T Consensus 88 ~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~----------------~~~ 151 (225)
T 1nnl_A 88 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDE----------------TQP 151 (225)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECT----------------TSG
T ss_pred CccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCC----------------CCc
Confidence 89999999999999999999999999999999999998631000000 011100 001
Q ss_pred ccCHhhHHHHHHHHHhC-C-CEEEEEeCCCCCCHHHHhhCCccEecCCCc-cHHHHhccchhhcccccHHHHH
Q 043360 776 SCLADDKLLLVQSVKEK-G-HVVAFFGGSSTRDTPALKEADVGITEENKC-TEMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 776 r~sP~~K~~iV~~lq~~-g-~~Va~iGD~G~ND~~aLk~AdVGIamg~~g-te~ak~aADivl~~f~~I~~li 845 (1108)
.+.+..|..+++.+.++ | ..++|+|| +.||..|.+.|+++|++|... .+.....+|+++.++..+..++
T Consensus 152 ~~~~~~Kp~~~~~~~~~~~~~~~~~vGD-s~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (225)
T 1nnl_A 152 TAESGGKGKVIKLLKEKFHFKKIIMIGD-GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223 (225)
T ss_dssp GGSTTHHHHHHHHHHHHHCCSCEEEEES-SHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC--
T ss_pred ccCCCchHHHHHHHHHHcCCCcEEEEeC-cHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHHH
Confidence 11234666666665443 4 57999999 999999999999988887432 2334456898888777765544
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.98 E-value=6.3e-06 Score=86.20 Aligned_cols=121 Identities=13% Similarity=0.049 Sum_probs=83.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.+++.+.++.|++.|+++.++|+.....+..+.+..|+... ...++.+.... ...-.|+--.
T Consensus 96 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~----------------~~kp~~~~~~ 157 (226)
T 1te2_A 96 LPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS--FDALASAEKLP----------------YSKPHPQVYL 157 (226)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEECTTSS----------------CCTTSTHHHH
T ss_pred CccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhh--CcEEEeccccC----------------CCCCChHHHH
Confidence 78999999999999999999999999888888888887531 11122211100 0011122223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEec----CCCccHHHHhccchhhcccccHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITE----ENKCTEMARECSDIVISAVGSLLPI 844 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIam----g~~gte~ak~aADivl~~f~~I~~l 844 (1108)
.+.+.+.-....++++|| +.||.+|++.|+++++| + ++.+..+..||+++.++..+..-
T Consensus 158 ~~~~~~~i~~~~~i~iGD-~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 158 DCAAKLGVDPLTCVALED-SVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp HHHHHHTSCGGGEEEEES-SHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSCGGGCCHH
T ss_pred HHHHHcCCCHHHeEEEeC-CHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECCHHHHhHH
Confidence 333433333457999999 99999999999999998 4 33444567899998877766554
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.95 E-value=2.5e-05 Score=82.77 Aligned_cols=102 Identities=18% Similarity=0.214 Sum_probs=74.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccc-cchhhhhhcCHHHHHHHhccccee-cccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIA-LEGEQFRELNSTERMAKLDSMTLM-GSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~v-i~G~~l~~l~~~~~~~~~~~~~V~-ar~sP~~ 781 (1108)
+|++.+.++.|++.|+++.++||.....+..+++.+|+..--..... -+|. +. -.+. ....+..
T Consensus 94 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~-------------g~~~~~~~~~~~ 159 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGR-YT-------------GRIEGTPSFREG 159 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTE-EE-------------EEEESSCSSTHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCE-Ee-------------eeecCCCCcchH
Confidence 89999999999999999999999999999999999998521000000 0110 00 0011 1223467
Q ss_pred HHHHHHHHH-hCC------CEEEEEeCCCCCCHHHHhhCCccEecC
Q 043360 782 KLLLVQSVK-EKG------HVVAFFGGSSTRDTPALKEADVGITEE 820 (1108)
Q Consensus 782 K~~iV~~lq-~~g------~~Va~iGD~G~ND~~aLk~AdVGIamg 820 (1108)
|...++.+. +.| +.+.++|| +.||.+|++.|++++++.
T Consensus 160 K~~~~~~~~~~~~~~~~~~~~~~~vGD-s~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 160 KVVRVNQWLAGMGLALGDFAESYFYSD-SVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp HHHHHHHHHHHTTCCGGGSSEEEEEEC-CGGGHHHHHHSSEEEEES
T ss_pred HHHHHHHHHHHcCCCcCchhheEEEeC-CHhhHHHHHhCCCeEEEC
Confidence 877776554 345 57999999 999999999999999986
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.93 E-value=2.2e-06 Score=99.02 Aligned_cols=115 Identities=17% Similarity=0.175 Sum_probs=74.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
+|++.+.|+.|+++|++|+|+||.....++.+|+++|+...-....|+ |.++....+..+...+.. ...-+..+.|.
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~dG~~tg~~~~--~~p~~~~~gK~ 299 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDEGKILPKFDK--DFPISIREGKV 299 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTTCCEEEEECT--TSCCCSTHHHH
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecCCceeeeecC--ccceeCCCchH
Confidence 899999999999999999999999999999999999874321112222 222211000000000000 00113457899
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhh-CCccEecCCC
Q 043360 784 LLVQSVKEK---GHVVAFFGGSSTRDTPALKE-ADVGITEENK 822 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~-AdVGIamg~~ 822 (1108)
..++.+.+. ...++++|| |.||.+||++ +|.|+++.++
T Consensus 300 ~~i~~~~~~~~~~~~i~a~GD-s~~D~~ML~~~~~~~~~liin 341 (385)
T 4gxt_A 300 QTINKLIKNDRNYGPIMVGGD-SDGDFAMLKEFDHTDLSLIIH 341 (385)
T ss_dssp HHHHHHTCCTTEECCSEEEEC-SGGGHHHHHHCTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCCcEEEEEC-CHhHHHHHhcCccCceEEEEc
Confidence 988876432 134777899 9999999996 7777775544
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.93 E-value=7.2e-06 Score=85.67 Aligned_cols=120 Identities=22% Similarity=0.243 Sum_probs=79.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH--hh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA--DD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP--~~ 781 (1108)
.+++.+.++.|++.|+++.++|++.......+.+.+|+... ...++.++.. ....| +-
T Consensus 91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------------------~~~k~~~~~ 150 (225)
T 3d6j_A 91 FPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDW--FDIIIGGEDV------------------THHKPDPEG 150 (225)
T ss_dssp CTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTC--CSEEECGGGC------------------SSCTTSTHH
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhh--eeeeeehhhc------------------CCCCCChHH
Confidence 78999999999999999999999999999988888887642 1222222211 11112 11
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEec----CCCccHHHHhc-cchhhcccccHHHHH
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITE----ENKCTEMAREC-SDIVISAVGSLLPIL 845 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIam----g~~gte~ak~a-ADivl~~f~~I~~li 845 (1108)
-..+.+.+.-..+.++++|| +.||.+|++.|+++++| + +..+..+.. ||+++.++..+...+
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD-~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGD-STVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIISTLGQLISVP 217 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEESSGGGGC---
T ss_pred HHHHHHHhCCChHHeEEEcC-CHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEECCHHHHHHhh
Confidence 12222222222346889999 99999999999998876 3 233333344 899988777766655
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.7e-05 Score=83.54 Aligned_cols=124 Identities=10% Similarity=0.037 Sum_probs=83.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCc---HHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDE---LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAD 780 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~---~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~ 780 (1108)
.|++.+.++.|++.|+++.++|+.. ...+..+.+.+|+... -..++.+.+... ..-.|+
T Consensus 101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~~----------------~kp~~~ 162 (235)
T 2om6_A 101 LEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEF--IDKTFFADEVLS----------------YKPRKE 162 (235)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGG--CSEEEEHHHHTC----------------CTTCHH
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHH--hhhheeccccCC----------------CCCCHH
Confidence 7999999999999999999999999 8888888888888642 122333322211 111122
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCccEecCC--CccHHHHhccchhhcccccHHHHHH
Q 043360 781 DKLLLVQSVKEKGHVVAFFGGSST-RDTPALKEADVGITEEN--KCTEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~g~~Va~iGD~G~-ND~~aLk~AdVGIamg~--~gte~ak~aADivl~~f~~I~~li~ 846 (1108)
--..+.+.+.-..+.++++|| +. ||..|++.|+++++|-. +..+..+..+|+++.++..+..++.
T Consensus 163 ~~~~~~~~lgi~~~~~~~iGD-~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 230 (235)
T 2om6_A 163 MFEKVLNSFEVKPEESLHIGD-TYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHTTCCGGGEEEEES-CTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHHH
T ss_pred HHHHHHHHcCCCccceEEECC-ChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHHH
Confidence 112222222212357999999 98 99999999999999822 2222233457888888888877663
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.90 E-value=6.7e-06 Score=88.45 Aligned_cols=120 Identities=18% Similarity=0.198 Sum_probs=83.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccC--Hhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL--ADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~s--P~~ 781 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++. .+.. |+-
T Consensus 116 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~------------------~~~Kp~~~~ 175 (243)
T 2hsz_A 116 YPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL--FSEMLGGQSL------------------PEIKPHPAP 175 (243)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTTS------------------SSCTTSSHH
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe--EEEEEecccC------------------CCCCcCHHH
Confidence 79999999999999999999999999999999999998642 1223333221 1122 223
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe-cC--CC-ccHHHHhccchhhcccccHHHH
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT-EE--NK-CTEMARECSDIVISAVGSLLPI 844 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa-mg--~~-gte~ak~aADivl~~f~~I~~l 844 (1108)
-..+.+.+.-..+.++++|| +.||+.|.+.|++++. +. .. +.+..+..+|+++.++..+.++
T Consensus 176 ~~~~~~~~~~~~~~~~~vGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 176 FYYLCGKFGLYPKQILFVGD-SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp HHHHHHHHTCCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHHHhCcChhhEEEEcC-CHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 33344444333467999999 9999999999998844 33 11 2344567789988877766543
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.86 E-value=1.1e-05 Score=86.08 Aligned_cols=123 Identities=14% Similarity=0.094 Sum_probs=85.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.++... ...-.|+--.
T Consensus 112 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 173 (240)
T 3sd7_A 112 YENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRY--FKYIAGSNLDG----------------TRVNKNEVIQ 173 (240)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECTTS----------------CCCCHHHHHH
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhh--EEEEEeccccC----------------CCCCCHHHHH
Confidence 89999999999999999999999999999999999998642 11222221110 0001111112
Q ss_pred HHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCc---cEecCCCccHH-HHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEK-GHVVAFFGGSSTRDTPALKEADV---GITEENKCTEM-ARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~-g~~Va~iGD~G~ND~~aLk~AdV---GIamg~~gte~-ak~aADivl~~f~~I~~li 845 (1108)
.+.+.+.-. .+.++++|| +.||..|.+.|++ ++++|....+. .+..+|+++.++..+.+++
T Consensus 174 ~~~~~~g~~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 174 YVLDLCNVKDKDKVIMVGD-RKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp HHHHHHTCCCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred HHHHHcCCCCCCcEEEECC-CHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 233333323 456899999 9999999999999 77777433232 3578999999998888765
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.85 E-value=3.1e-05 Score=81.64 Aligned_cols=122 Identities=12% Similarity=0.138 Sum_probs=88.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++. +++.++|+.....+..+.+.+|+... -..++.+.+.. ...-.|+--.
T Consensus 102 ~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 162 (234)
T 3u26_A 102 YPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDL--FDSITTSEEAG----------------FFKPHPRIFE 162 (234)
T ss_dssp CTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEHHHHT----------------BCTTSHHHHH
T ss_pred CcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHH--cceeEeccccC----------------CCCcCHHHHH
Confidence 79999999999999 99999999999999999999998642 12233332211 1111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCC---ccEecCCCccHHHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSST-RDTPALKEAD---VGITEENKCTEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~-ND~~aLk~Ad---VGIamg~~gte~ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-..+.++++|| +. ||..|.+.|+ +++++| ++.+..+..+|+++.++..+..++.
T Consensus 163 ~~~~~~~~~~~~~~~vGD-~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~~~~el~~~l~ 227 (234)
T 3u26_A 163 LALKKAGVKGEEAVYVGD-NPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVSDLREVIKIVD 227 (234)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEESSTHHHHHHHH
T ss_pred HHHHHcCCCchhEEEEcC-CcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeCCHHHHHHHHH
Confidence 333333323467999999 97 9999999999 678788 5666666789999998888887764
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.84 E-value=9.9e-06 Score=83.16 Aligned_cols=117 Identities=13% Similarity=0.092 Sum_probs=81.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
+|++.+.++.|++.|+++.++|++...... ..+.+|+... -..++.+.+.. ...-.|+--.
T Consensus 87 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 147 (207)
T 2go7_A 87 MPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY--FTEILTSQSGF----------------VRKPSPEAAT 147 (207)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG--EEEEECGGGCC----------------CCTTSSHHHH
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh--eeeEEecCcCC----------------CCCCCcHHHH
Confidence 899999999999999999999999988888 8788887531 11122221110 0011122223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-EecCCCccHHHHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG-Iamg~~gte~ak~aADivl~~f~~I~~li 845 (1108)
.+.+.+.-..+.++++|| +.||.+|++.|+++ ++|+ +|.+ .||+++.++..+.+++
T Consensus 148 ~~~~~~~i~~~~~~~iGD-~~nDi~~~~~aG~~~i~~~-~~~~----~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 148 YLLDKYQLNSDNTYYIGD-RTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQALADISRIF 204 (207)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHHTCEEEESS-CCSC----TTEEECSSTTHHHHHT
T ss_pred HHHHHhCCCcccEEEECC-CHHHHHHHHHCCCeEEEEe-cCCC----CCCEEeCCHHHHHHHH
Confidence 344444333456999999 99999999999998 8888 5552 6899888888877665
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.84 E-value=2.8e-05 Score=84.31 Aligned_cols=54 Identities=19% Similarity=0.079 Sum_probs=45.3
Q ss_pred hHHHHHHHHHhC-----CCEEEEEeCCCCCCHHHHhhCCccEecCCCcc-HHHHhccchhhc
Q 043360 781 DKLLLVQSVKEK-----GHVVAFFGGSSTRDTPALKEADVGITEENKCT-EMARECSDIVIS 836 (1108)
Q Consensus 781 ~K~~iV~~lq~~-----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gt-e~ak~aADivl~ 836 (1108)
.|..-++.+.+. ...|+++|| |.||.+||+.|++||||| ++. +..++.||+++.
T Consensus 179 sKg~al~~l~~~~~~~~~~~viafGD-~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 179 DKGKAAKILLDFYKRLGQIESYAVGD-SYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEEC-SGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHH
T ss_pred ChHHHHHHHHHHhccCCCceEEEECC-CcccHHHHHhCCcEEEeC-CCCccccchhceEEec
Confidence 588877777654 357999999 999999999999999999 677 667778998875
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.83 E-value=4.9e-05 Score=84.06 Aligned_cols=64 Identities=19% Similarity=0.220 Sum_probs=51.2
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
+|...++.+.+. | ..++++|| +.||.+|++.|++|++|| ++.+..++.||+++. +-.++.++|+
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD-~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGD-SLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEES-SGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcC-CHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHH
Confidence 466656666544 2 46899999 999999999999999999 788888999999987 5556666654
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.82 E-value=1e-05 Score=85.40 Aligned_cols=125 Identities=12% Similarity=0.025 Sum_probs=90.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+.+.. ...-.|+--.
T Consensus 101 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 162 (233)
T 3umb_A 101 FPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGL--FDHVLSVDAVR----------------LYKTAPAAYA 162 (233)
T ss_dssp CTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTT--CSEEEEGGGTT----------------CCTTSHHHHT
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhh--cCEEEEecccC----------------CCCcCHHHHH
Confidence 79999999999999999999999999999999999998753 22233332211 1111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEec----CCCccHHHHhccchhhcccccHHHHHHhh
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITE----ENKCTEMARECSDIVISAVGSLLPILKLG 848 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIam----g~~gte~ak~aADivl~~f~~I~~li~~G 848 (1108)
.+.+.+.-..+.++++|| +.||..|.+.|+++++| + +..+..+..+|+++.++..+..++...
T Consensus 163 ~~~~~~~~~~~~~~~vGD-~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~~~~el~~~l~~~ 229 (233)
T 3umb_A 163 LAPRAFGVPAAQILFVSS-NGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGHDMRDLLQFVQAR 229 (233)
T ss_dssp HHHHHHTSCGGGEEEEES-CHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEESSHHHHHHHHHC-
T ss_pred HHHHHhCCCcccEEEEeC-CHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEECCHHHHHHHHHHh
Confidence 333333323467999999 99999999999999998 4 444445667999999999998887653
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.81 E-value=5e-05 Score=82.63 Aligned_cols=177 Identities=16% Similarity=0.186 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEEecCcc----hhhhc----cCceeeE----------EE----ec-ccchHHHHHHHHH
Q 043360 660 KRRFQKLIKDMEDSGLRPIAFACGQTEV----SEIKE----NGLHLLA----------LA----GL-REEIKSTVEALRN 716 (1108)
Q Consensus 660 ~~~~~~~i~~~a~~GlR~L~~A~k~l~~----~~~~E----~~l~llG----------~i----~i-r~~v~~aI~~l~~ 716 (1108)
.+...+.++++.++|.++....=|. .. .+.+. -+ .+++ -. .+ ++++.+.++.+++
T Consensus 22 ~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~-~~i~~nGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~ 99 (261)
T 2rbk_A 22 PSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQDRNLID-GYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEK 99 (261)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHHHTTCCC-EEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhCcccccC-eEEEeCCEEEEECCEEEEecCCCHHHHHHHHHHHHH
Confidence 3556777888888998876655555 41 11111 11 1222 11 11 6888999999999
Q ss_pred cCCEEEEecCCcH------HHHH-HHHHHcCC-CCCC----------CCccccchhhhhhcCHHH---HHHHhcccceec
Q 043360 717 AGVRIILVSEDEL------LAVT-EVACELGN-FRPE----------SNDIALEGEQFRELNSTE---RMAKLDSMTLMG 775 (1108)
Q Consensus 717 aGI~v~mlTGD~~------~tA~-~IA~~~GI-~~~~----------~~~~vi~G~~l~~l~~~~---~~~~~~~~~V~a 775 (1108)
.|+.+.+.|+|.. .... ..-+.+++ .... ...+++.+ .+++ +.+.++++.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~~~~~~~~~~ 173 (261)
T 2rbk_A 100 KGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFI------TEEEEKEVLPSIPTCEIGR 173 (261)
T ss_dssp HTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECC------CHHHHHHHGGGSTTCEEEC
T ss_pred cCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEe------CHHHHHHHHHhcCCeEEEE
Confidence 9999888888764 1111 11122232 1000 00011111 1122 222222332211
Q ss_pred ------ccCH--hhHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhccccc--H
Q 043360 776 ------SCLA--DDKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISAVGS--L 841 (1108)
Q Consensus 776 ------r~sP--~~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~~f~~--I 841 (1108)
...| ..|...++.+.++ | ..++++|| +.||.+|++.|++|++|| ++.+..+..||+++.+... +
T Consensus 174 s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD-~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv 251 (261)
T 2rbk_A 174 WYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGD-GGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGI 251 (261)
T ss_dssp SSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHH
T ss_pred ecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhH
Confidence 1122 3677777776554 3 56899999 999999999999999999 7888888999999885555 7
Q ss_pred HHHHH
Q 043360 842 LPILK 846 (1108)
Q Consensus 842 ~~li~ 846 (1108)
.++++
T Consensus 252 ~~~l~ 256 (261)
T 2rbk_A 252 SKAMK 256 (261)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77764
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.81 E-value=1e-05 Score=83.75 Aligned_cols=121 Identities=16% Similarity=0.140 Sum_probs=84.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++.. ...-.|+--.
T Consensus 91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 152 (214)
T 3e58_A 91 FPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGF--FDIVLSGEEFK----------------ESKPNPEIYL 152 (214)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGCS----------------SCTTSSHHHH
T ss_pred CchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhh--eeeEeeccccc----------------CCCCChHHHH
Confidence 89999999999999999999999999999999999998642 22233332211 1111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCc-cHHHHhccchhhcccccHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKC-TEMARECSDIVISAVGSLLP 843 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~g-te~ak~aADivl~~f~~I~~ 843 (1108)
.+.+.+.-..+.++++|| +.||..|.+.|++++++...+ ....+..+|+++.++..+.+
T Consensus 153 ~~~~~~~~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 153 TALKQLNVQASRALIIED-SEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp HHHHHHTCCGGGEEEEEC-SHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGG
T ss_pred HHHHHcCCChHHeEEEec-cHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHh
Confidence 344444333467999999 999999999999998875433 33344678888887766654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.80 E-value=3.2e-05 Score=81.54 Aligned_cols=121 Identities=12% Similarity=0.101 Sum_probs=82.2
Q ss_pred ccchHHHHHHHHHc-CCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNA-GVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~a-GI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
.|++.+.++.|++. |+++.++|+.....+..+.+.+|+... -..++.+.+. ..+ |.-+
T Consensus 95 ~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~-----------------~~~--~k~~ 153 (234)
T 2hcf_A 95 LEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY--FPFGAFADDA-----------------LDR--NELP 153 (234)
T ss_dssp CTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT--CSCEECTTTC-----------------SSG--GGHH
T ss_pred CCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhh--cCcceecCCC-----------------cCc--cchH
Confidence 89999999999999 999999999999999999999998652 1122222211 111 1122
Q ss_pred HHHHHH-HHhCC-----CEEEEEeCCCCCCHHHHhhCC---ccEecCCCccHHHHh-ccchhhcccccHHHHHH
Q 043360 783 LLLVQS-VKEKG-----HVVAFFGGSSTRDTPALKEAD---VGITEENKCTEMARE-CSDIVISAVGSLLPILK 846 (1108)
Q Consensus 783 ~~iV~~-lq~~g-----~~Va~iGD~G~ND~~aLk~Ad---VGIamg~~gte~ak~-aADivl~~f~~I~~li~ 846 (1108)
..+.+. +++.| +.++++|| +.||..|.+.|+ |++++|....+..+. .+|+++.++..+.+++.
T Consensus 154 ~~~~~~~~~~lg~~~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l~ 226 (234)
T 2hcf_A 154 HIALERARRMTGANYSPSQIVIIGD-TEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLA 226 (234)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEES-SHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccEEEECC-CHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHHH
Confidence 222222 23323 57999999 999999999999 566666322222222 38999888888877653
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=3.6e-05 Score=83.69 Aligned_cols=61 Identities=13% Similarity=0.128 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHhC-C-----CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHH
Q 043360 780 DDKLLLVQSVKEK-G-----HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPIL 845 (1108)
Q Consensus 780 ~~K~~iV~~lq~~-g-----~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li 845 (1108)
.+|...++.+.++ | ..++++|| +.||.+|++.|++|++|| ++.+ . +++++.. +-..+.+++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD-~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~ 243 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGD-SLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAV 243 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEES-SGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeC-CHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHH
Confidence 5788888887665 3 67999999 999999999999999999 6777 3 6777766 333344443
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.79 E-value=2.4e-05 Score=85.74 Aligned_cols=65 Identities=15% Similarity=0.151 Sum_probs=53.7
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 780 DDKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 780 ~~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
..|...++.+.+. | ..++++|| +.||.+|++.|++|++|| ++.+..|+.||+++. +-..+.++++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD-~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGD-SGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECC-cHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 3788888777655 3 46999999 999999999999999999 788888999999987 4456766654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.78 E-value=3.4e-05 Score=84.45 Aligned_cols=64 Identities=25% Similarity=0.341 Sum_probs=53.1
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
.|...++.+.+. ...++++|| +.||.+|++.|++|++|| ++.+..++.||+++. +-..+.+++.
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD-~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGD-NENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEEC-SHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcC-chhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 688877777654 256899999 999999999999999999 788888889999987 4566777664
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.78 E-value=1.4e-05 Score=84.57 Aligned_cols=126 Identities=18% Similarity=0.127 Sum_probs=86.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+.+. ....-.|+-..
T Consensus 85 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~----------------~~~Kp~~~~~~ 146 (222)
T 2nyv_A 85 YPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY--FDLIVGGDTF----------------GEKKPSPTPVL 146 (222)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTSS----------------CTTCCTTHHHH
T ss_pred CCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH--heEEEecCcC----------------CCCCCChHHHH
Confidence 89999999999999999999999999999999999997531 1222222211 01122233334
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-EecCC-CccHHHHhccchhhcccccHHHHHHhhh
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG-ITEEN-KCTEMARECSDIVISAVGSLLPILKLGR 849 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG-Iamg~-~gte~ak~aADivl~~f~~I~~li~~GR 849 (1108)
.+.+.+.-....++++|| +.||..|.+.|++. |++.. .+.... ..+|+++.++..+.+++....
T Consensus 147 ~~~~~~~~~~~~~~~vGD-~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l~~~~ 212 (222)
T 2nyv_A 147 KTLEILGEEPEKALIVGD-TDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLMDNHI 212 (222)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHHHTTS
T ss_pred HHHHHhCCCchhEEEECC-CHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHHHHhh
Confidence 444444333457999999 99999999999987 55431 122212 568888889998888775443
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.77 E-value=7.9e-05 Score=81.95 Aligned_cols=40 Identities=23% Similarity=0.187 Sum_probs=36.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 743 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~ 743 (1108)
-+.+.++|++|+++|+++.++||.....+..+.+++|+..
T Consensus 28 ~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 67 (275)
T 1xvi_A 28 WQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 67 (275)
T ss_dssp CCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 4668999999999999999999999999999999998753
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.75 E-value=1.4e-05 Score=84.15 Aligned_cols=123 Identities=17% Similarity=0.178 Sum_probs=85.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++.. ...-.|+--.
T Consensus 98 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 159 (230)
T 3um9_A 98 FADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNS--FDHLISVDEVR----------------LFKPHQKVYE 159 (230)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGG--CSEEEEGGGTT----------------CCTTCHHHHH
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhh--cceeEehhhcc----------------cCCCChHHHH
Confidence 89999999999999999999999999999999999998642 12222222111 0111122222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCC---CccHHHHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEEN---KCTEMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~---~gte~ak~aADivl~~f~~I~~li 845 (1108)
.+.+.+.-....+.++|| +.||..|.+.|+++++|-. +..+..+..+|+++.++..+..++
T Consensus 160 ~~~~~~~~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 223 (230)
T 3um9_A 160 LAMDTLHLGESEILFVSC-NSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRF 223 (230)
T ss_dssp HHHHHHTCCGGGEEEEES-CHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTC
T ss_pred HHHHHhCCCcccEEEEeC-CHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHH
Confidence 333333322457999999 9999999999999999822 333444567899988888777654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.73 E-value=1.4e-05 Score=83.53 Aligned_cols=113 Identities=12% Similarity=0.005 Sum_probs=77.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH--hh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA--DD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP--~~ 781 (1108)
.+++.+.++.|++.|+++.++|++ ..+..+.+.+|+... ...++.+++. .+..| +-
T Consensus 93 ~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~--f~~~~~~~~~------------------~~~Kp~~~~ 150 (221)
T 2wf7_A 93 YPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGY--FDAIADPAEV------------------AASKPAPDI 150 (221)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGG--CSEECCTTTS------------------SSCTTSSHH
T ss_pred CCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHH--cceEeccccC------------------CCCCCChHH
Confidence 799999999999999999999998 445667777887532 1222222211 11122 22
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhcccccH
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISAVGSL 841 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~~f~~I 841 (1108)
-..+.+.+.-..+.++++|| +.||..|++.|+++++|+ ++.+..+ .||+++.++..+
T Consensus 151 ~~~~~~~lgi~~~~~i~iGD-~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 151 FIAAAHAVGVAPSESIGLED-SQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHY 207 (221)
T ss_dssp HHHHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGC
T ss_pred HHHHHHHcCCChhHeEEEeC-CHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhC
Confidence 22233333222456999999 999999999999999998 5666666 899988755443
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=1.6e-05 Score=87.31 Aligned_cols=124 Identities=13% Similarity=0.023 Sum_probs=85.4
Q ss_pred ccchHHHHHHHHHcCC--EEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhh
Q 043360 704 REEIKSTVEALRNAGV--RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI--~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~ 781 (1108)
.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+... -..++.++.... ... .+.-
T Consensus 144 ~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~--fd~v~~~~~~~~--------------~~~--~~Kp 205 (282)
T 3nuq_A 144 DIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADL--FDGLTYCDYSRT--------------DTL--VCKP 205 (282)
T ss_dssp CHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTS--CSEEECCCCSSC--------------SSC--CCTT
T ss_pred ChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccc--cceEEEeccCCC--------------ccc--CCCc
Confidence 7999999999999999 9999999999999999999998653 122222211000 001 1122
Q ss_pred HHHHHHHHH----hCC-CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHH-----HhccchhhcccccHHHHHH
Q 043360 782 KLLLVQSVK----EKG-HVVAFFGGSSTRDTPALKEADVGITEENKCTEMA-----RECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 782 K~~iV~~lq----~~g-~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~a-----k~aADivl~~f~~I~~li~ 846 (1108)
|...++.+. -.. +.+.++|| +.||..|.+.|++|.+|+..+.+.. ...||+++.++..+.+++.
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~ 279 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDD-SGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVS 279 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEES-CHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTSG
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcC-CHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhh
Confidence 333333332 224 67999999 9999999999999999874333211 2378898888887776553
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=3.1e-05 Score=83.72 Aligned_cols=64 Identities=13% Similarity=0.135 Sum_probs=51.2
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhc-------cchhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMAREC-------SDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~a-------ADivl~--~f~~I~~li~ 846 (1108)
.|...++.+.+. | ..|+++|| +.||.+|++.|++|++|| ++.+..|+. ||++.. +-..+.++++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD-~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGD-SGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECC-chhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 688877777654 3 46899999 999999999999999999 788888885 788887 4455666554
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.71 E-value=4e-05 Score=83.09 Aligned_cols=126 Identities=10% Similarity=0.012 Sum_probs=86.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.++... ...-.|+--.
T Consensus 113 ~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~----------------~~kp~~~~~~ 175 (277)
T 3iru_A 113 IPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT-PASTVFATDVV----------------RGRPFPDMAL 175 (277)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC-CSEEECGGGSS----------------SCTTSSHHHH
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC-CceEecHHhcC----------------CCCCCHHHHH
Confidence 789999999999999999999999999999999888875420 12233222210 0111122223
Q ss_pred HHHHHHHhCC-CEEEEEeCCCCCCHHHHhhCC---ccEecCCC-----------------------ccHH-HHhccchhh
Q 043360 784 LLVQSVKEKG-HVVAFFGGSSTRDTPALKEAD---VGITEENK-----------------------CTEM-ARECSDIVI 835 (1108)
Q Consensus 784 ~iV~~lq~~g-~~Va~iGD~G~ND~~aLk~Ad---VGIamg~~-----------------------gte~-ak~aADivl 835 (1108)
.+.+.+.-.. +.++|+|| +.||..|.+.|+ |+|++|.. ..+. ....+|+++
T Consensus 176 ~~~~~lgi~~~~~~i~vGD-~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~ 254 (277)
T 3iru_A 176 KVALELEVGHVNGCIKVDD-TLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVI 254 (277)
T ss_dssp HHHHHHTCSCGGGEEEEES-SHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHcCCCCCccEEEEcC-CHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEe
Confidence 3334443334 67999999 999999999999 56777732 1222 334489999
Q ss_pred cccccHHHHHHh
Q 043360 836 SAVGSLLPILKL 847 (1108)
Q Consensus 836 ~~f~~I~~li~~ 847 (1108)
.++..|..++..
T Consensus 255 ~~~~el~~~l~~ 266 (277)
T 3iru_A 255 DSVADLETVITD 266 (277)
T ss_dssp SSGGGTHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 999988888753
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.71 E-value=3.5e-05 Score=82.42 Aligned_cols=136 Identities=13% Similarity=0.065 Sum_probs=90.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHH--HhcccceecccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMA--KLDSMTLMGSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~--~~~~~~V~ar~sP~~ 781 (1108)
.|++.+.++.|+++|+++.++|+.....+..+.+ |+... ..++.++.... +..+.. .-++-..+.+....+
T Consensus 79 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~---~~v~~~~~~~~--~~~~~~~~~kp~p~~~~~~~~~~ 151 (236)
T 2fea_A 79 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK---DRIYCNHASFD--NDYIHIDWPHSCKGTCSNQCGCC 151 (236)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG---GGEEEEEEECS--SSBCEEECTTCCCTTCCSCCSSC
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC---CeEEeeeeEEc--CCceEEecCCCCccccccccCCc
Confidence 8999999999999999999999999998888887 76431 23333322110 000000 001111111113457
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhc--cchhhcccccHHHHHHhh
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAREC--SDIVISAVGSLLPILKLG 848 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~a--ADivl~~f~~I~~li~~G 848 (1108)
|..+++.+.-..+.++|+|| +.||+.|.+.|++.++.+ ...+..+.. +|+++.++..+..++...
T Consensus 152 K~~~~~~~~~~~~~~~~vGD-s~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 218 (236)
T 2fea_A 152 KPSVIHELSEPNQYIIMIGD-SVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQDFYEIRKEIENV 218 (236)
T ss_dssp HHHHHHHHCCTTCEEEEEEC-CGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCSSHHHHHHHHHTS
T ss_pred HHHHHHHHhccCCeEEEEeC-ChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecCCHHHHHHHHHHh
Confidence 88888888766788999999 999999999999988743 112223233 788888888888877543
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.70 E-value=3e-05 Score=81.95 Aligned_cols=120 Identities=11% Similarity=0.034 Sum_probs=81.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+.+.. ...-.|+--.
T Consensus 105 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~----------------~~Kp~~~~~~ 166 (231)
T 3kzx_A 105 NDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHY--FDSIIGSGDTG----------------TIKPSPEPVL 166 (231)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEETSSS----------------CCTTSSHHHH
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhh--eeeEEcccccC----------------CCCCChHHHH
Confidence 89999999999999999999999999999999999998642 12222222110 0111222223
Q ss_pred HHHHHHHhCCC-EEEEEeCCCCCCHHHHhhCCc-cEecCCCccHHHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGH-VVAFFGGSSTRDTPALKEADV-GITEENKCTEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~-~Va~iGD~G~ND~~aLk~AdV-GIamg~~gte~ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-... .++++|| +.||..|.+.|++ +|.++ ++.+ ..+|+++.++..+.+++.
T Consensus 167 ~~~~~lgi~~~~~~v~vGD-~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~~~~el~~~l~ 226 (231)
T 3kzx_A 167 AALTNINIEPSKEVFFIGD-SISDIQSAIEAGCLPIKYG-STNI---IKDILSFKNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHTCCCSTTEEEEES-SHHHHHHHHHTTCEEEEEC-C--------CCEEESSHHHHHHHHH
T ss_pred HHHHHcCCCcccCEEEEcC-CHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeCCHHHHHHHHH
Confidence 33444433344 7999999 9999999999997 67677 4443 356777778888877654
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.70 E-value=2.8e-05 Score=85.91 Aligned_cols=127 Identities=17% Similarity=0.181 Sum_probs=81.4
Q ss_pred ccchHHHHHHHHHc-CCEEEEecCC---------------------cHHHHHHHHHHcCCCCCCCCccccchhhhhhcCH
Q 043360 704 REEIKSTVEALRNA-GVRIILVSED---------------------ELLAVTEVACELGNFRPESNDIALEGEQFRELNS 761 (1108)
Q Consensus 704 r~~v~~aI~~l~~a-GI~v~mlTGD---------------------~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~ 761 (1108)
++++.+.++.+++. |+++.+.|.. ....+..+.++.|+... +........-
T Consensus 124 ~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-----~~~~~~~~~~-- 196 (289)
T 3gyg_A 124 KEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN-----INRCNPLAGD-- 196 (289)
T ss_dssp HHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE-----EEECCGGGTC--
T ss_pred HHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE-----EEEccccccC--
Confidence 78999999999998 9999888876 23333334444443210 0000000000
Q ss_pred HHHHHHhcccceecccCH--hhHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhh
Q 043360 762 TERMAKLDSMTLMGSCLA--DDKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI 835 (1108)
Q Consensus 762 ~~~~~~~~~~~V~ar~sP--~~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl 835 (1108)
+.-..+....| ..|...++.+.++ | ..++++|| +.||.+|++.|++|++|| ++.+..++.||+++
T Consensus 197 -------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GD-s~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~ 267 (289)
T 3gyg_A 197 -------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGD-SGNDVRMLQTVGNGYLLK-NATQEAKNLHNLIT 267 (289)
T ss_dssp -------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBC
T ss_pred -------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcC-CHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEc
Confidence 00001222233 3577777766554 3 46999999 999999999999999999 78888999999998
Q ss_pred c--ccccHHHHHH
Q 043360 836 S--AVGSLLPILK 846 (1108)
Q Consensus 836 ~--~f~~I~~li~ 846 (1108)
. +-..+.+++.
T Consensus 268 ~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 268 DSEYSKGITNTLK 280 (289)
T ss_dssp SSCHHHHHHHHHH
T ss_pred CCCCcCHHHHHHH
Confidence 7 3344666554
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00012 Score=81.67 Aligned_cols=64 Identities=19% Similarity=0.271 Sum_probs=51.9
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc-c--cccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS-A--VGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~-~--f~~I~~li~ 846 (1108)
.|...++.+.+. | ..|+++|| +.||.+|++.|++|++|| ++.+..++.||+++. + -..+.++|.
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD-~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGD-AENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 687777777654 3 46899999 999999999999999999 788888899999886 3 445666654
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.67 E-value=4.8e-05 Score=80.36 Aligned_cols=116 Identities=15% Similarity=0.072 Sum_probs=74.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+... +..+.+.+|+... -..++.+++.. ...-.|+--.
T Consensus 94 ~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~--f~~i~~~~~~~----------------~~Kp~~~~~~ 153 (233)
T 3nas_A 94 LPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDD--FHAIVDPTTLA----------------KGKPDPDIFL 153 (233)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTT--CSEECCC-------------------------CCHHH
T ss_pred CcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhh--cCEEeeHhhCC----------------CCCCChHHHH
Confidence 79999999999999999999999754 7778888998652 22333332211 0011111113
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhcccccHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISAVGSLL 842 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~~f~~I~ 842 (1108)
.+.+.+.-..+.++|+|| +.||+.|.+.|+++++|. ++.+..+ .||+++.++..+.
T Consensus 154 ~~~~~lgi~~~~~i~vGD-s~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 154 TAAAMLDVSPADCAAIED-AEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLT 209 (233)
T ss_dssp HHHHHHTSCGGGEEEEEC-SHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCC
T ss_pred HHHHHcCCCHHHEEEEeC-CHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCC
Confidence 333444333467999999 999999999999999998 4555554 8999988655554
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00021 Score=76.07 Aligned_cols=123 Identities=14% Similarity=0.059 Sum_probs=83.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... -..++.+++.. ...-.|+-=.
T Consensus 96 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 157 (241)
T 2hoq_A 96 VPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDF--FEHVIISDFEG----------------VKKPHPKIFK 157 (241)
T ss_dssp CTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGG--CSEEEEGGGGT----------------CCTTCHHHHH
T ss_pred CccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhh--ccEEEEeCCCC----------------CCCCCHHHHH
Confidence 79999999999999999999999999989999999997542 12233222111 0111122112
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCccEec---CCCccHHHHh---ccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSST-RDTPALKEADVGITE---ENKCTEMARE---CSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~-ND~~aLk~AdVGIam---g~~gte~ak~---aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-..+.++++|| +. ||..|.+.|+++.+. | .+...... .+|+++.++..+..++.
T Consensus 158 ~~~~~~g~~~~~~i~iGD-~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~~~~el~~~l~ 225 (241)
T 2hoq_A 158 KALKAFNVKPEEALMVGD-RLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEIDNLESLLEVLA 225 (241)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEESSTTHHHHHHH
T ss_pred HHHHHcCCCcccEEEECC-CchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEECCHHHHHHHHH
Confidence 223333222456999999 98 999999999997553 4 23333332 68988888888887764
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=5.7e-05 Score=80.45 Aligned_cols=122 Identities=13% Similarity=0.114 Sum_probs=83.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++.. ...-.|+--.
T Consensus 107 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 168 (240)
T 2no4_A 107 YPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRV--LDSCLSADDLK----------------IYKPDPRIYQ 168 (240)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGTT----------------CCTTSHHHHH
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHH--cCEEEEccccC----------------CCCCCHHHHH
Confidence 79999999999999999999999999999999999998642 12233332211 1111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc---EecCCCccHHHHhcc-chhhcccccHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG---ITEENKCTEMARECS-DIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG---Iamg~~gte~ak~aA-Divl~~f~~I~~li 845 (1108)
.+.+.+.-..+.++++|| +.||..|.+.|++. +..|. +.+..+..+ |+++.++..+..++
T Consensus 169 ~~~~~~~~~~~~~~~iGD-~~~Di~~a~~aG~~~~~v~~~~-~~~~~~~~~~~~~~~~~~el~~~l 232 (240)
T 2no4_A 169 FACDRLGVNPNEVCFVSS-NAWDLGGAGKFGFNTVRINRQG-NPPEYEFAPLKHQVNSLSELWPLL 232 (240)
T ss_dssp HHHHHHTCCGGGEEEEES-CHHHHHHHHHHTCEEEEECTTC-CCCCCTTSCCSEEESSGGGHHHHH
T ss_pred HHHHHcCCCcccEEEEeC-CHHHHHHHHHCCCEEEEECCCC-CCCcccCCCCceeeCCHHHHHHHH
Confidence 333333323456889999 99999999999954 44552 233233456 88888888887765
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.56 E-value=6.1e-05 Score=76.69 Aligned_cols=123 Identities=11% Similarity=-0.026 Sum_probs=79.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcH---------------HHHHHHHHHcC--CCCCCCCccccchhhhhhcCHHHHHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDEL---------------LAVTEVACELG--NFRPESNDIALEGEQFRELNSTERMA 766 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~~IA~~~G--I~~~~~~~~vi~G~~l~~l~~~~~~~ 766 (1108)
.|++.++++.|+++|+++.++|+... ..+..+.+++| +..- ......+.+
T Consensus 29 ~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~~~~~~~~----------- 95 (179)
T 3l8h_A 29 LPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAI--FMCPHGPDD----------- 95 (179)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEE--EEECCCTTS-----------
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEE--EEcCCCCCC-----------
Confidence 79999999999999999999999875 45566666777 2210 000000000
Q ss_pred HhcccceecccCH--hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc---cEecCCCccHHHH----hccchhhcc
Q 043360 767 KLDSMTLMGSCLA--DDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADV---GITEENKCTEMAR----ECSDIVISA 837 (1108)
Q Consensus 767 ~~~~~~V~ar~sP--~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV---GIamg~~gte~ak----~aADivl~~ 837 (1108)
-+....| +-=..+.+.+.-..+.+.|+|| +.||..|.+.|++ +|++| .+..... ..+|+++.+
T Consensus 96 ------~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD-~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v~~~ 167 (179)
T 3l8h_A 96 ------GCACRKPLPGMYRDIARRYDVDLAGVPAVGD-SLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRVCED 167 (179)
T ss_dssp ------CCSSSTTSSHHHHHHHHHHTCCCTTCEEEES-SHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEEESS
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEEecC
Confidence 0111122 1112233333323467999999 9999999999995 77777 4444433 457999989
Q ss_pred cccHHHHHHh
Q 043360 838 VGSLLPILKL 847 (1108)
Q Consensus 838 f~~I~~li~~ 847 (1108)
+..+.+++..
T Consensus 168 l~el~~~l~~ 177 (179)
T 3l8h_A 168 LAAVAEQLLQ 177 (179)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888887643
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.56 E-value=4.3e-05 Score=82.45 Aligned_cols=126 Identities=17% Similarity=-0.001 Sum_probs=85.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCcc-ccchhhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI-ALEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~-vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+..|+... -.. ++.+++.. ....-.|+--
T Consensus 112 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~i~~~~~~~---------------~~~Kp~~~~~ 174 (259)
T 4eek_A 112 IEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL--AGEHIYDPSWVG---------------GRGKPHPDLY 174 (259)
T ss_dssp CTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH--HCSCEECGGGGT---------------TCCTTSSHHH
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh--ccceEEeHhhcC---------------cCCCCChHHH
Confidence 89999999999999999999999999999999999987531 111 22222211 0111112211
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-EecCCCc-------c-HHHHhccchhhcccccHHHHHHhh
Q 043360 783 LLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKC-------T-EMARECSDIVISAVGSLLPILKLG 848 (1108)
Q Consensus 783 ~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG-Iamg~~g-------t-e~ak~aADivl~~f~~I~~li~~G 848 (1108)
..+.+.+.-..+.++++|| +.||+.|.+.|+++ |.+. .| . +..+..+|+++.++..+.+++...
T Consensus 175 ~~~~~~lgi~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~~~ 247 (259)
T 4eek_A 175 TFAAQQLGILPERCVVIED-SVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLTSHAELRAALAEA 247 (259)
T ss_dssp HHHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHEEEEcC-CHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhCCHHHHHHHHHhc
Confidence 2222222222357999999 99999999999998 4443 22 2 233355899999999998887653
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.56 E-value=6.5e-05 Score=79.90 Aligned_cols=124 Identities=7% Similarity=0.021 Sum_probs=79.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+....+. |+...-....++.+.+.. ...-.|+--.
T Consensus 110 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~----------------~~kp~~~~~~ 172 (247)
T 3dv9_A 110 MPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK----------------YGKPNPEPYL 172 (247)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS----------------SCTTSSHHHH
T ss_pred CCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC----------------CCCCCCHHHH
Confidence 79999999999999999999999988877777777 876420003334333211 1112222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-EecCCCccHH----HHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEM----ARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG-Iamg~~gte~----ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-..+.++++|| +.||..|.+.|+++ +.+. .|... .+..||+++.++..+..++.
T Consensus 173 ~~~~~lg~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~~~~el~~~l~ 238 (247)
T 3dv9_A 173 MALKKGGFKPNEALVIEN-APLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFHSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHTCCGGGEEEEEC-SHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEESSHHHHHHHHH
T ss_pred HHHHHcCCChhheEEEeC-CHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEECCHHHHHHHHH
Confidence 333443333456999999 99999999999965 3333 23222 22379999988888777664
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.55 E-value=3.5e-05 Score=81.44 Aligned_cols=123 Identities=12% Similarity=0.133 Sum_probs=83.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++.. ...-.|+--.
T Consensus 97 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 158 (232)
T 1zrn_A 97 FSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG--FDHLLSVDPVQ----------------VYKPDNRVYE 158 (232)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEESGGGT----------------CCTTSHHHHH
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhh--hheEEEecccC----------------CCCCCHHHHH
Confidence 79999999999999999999999999999999999998542 12222222111 1122232333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCc---cHHHHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKC---TEMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~g---te~ak~aADivl~~f~~I~~li 845 (1108)
.+.+.+.-..+.++++|| +.||..|.+.|++++++-..+ .+..+..+|+++.++..+..++
T Consensus 159 ~~~~~~~~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 222 (232)
T 1zrn_A 159 LAEQALGLDRSAILFVAS-NAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELF 222 (232)
T ss_dssp HHHHHHTSCGGGEEEEES-CHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC
T ss_pred HHHHHcCCCcccEEEEeC-CHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHH
Confidence 344444323456889999 999999999999998873222 2233456788877766665544
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.50 E-value=6.1e-05 Score=80.38 Aligned_cols=124 Identities=9% Similarity=0.046 Sum_probs=81.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+....+. |+...-....++.+++.. ...-.|+--.
T Consensus 111 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~----------------~~kp~~~~~~ 173 (243)
T 3qxg_A 111 MPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK----------------YGKPNPEPYL 173 (243)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS----------------SCTTSSHHHH
T ss_pred CCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC----------------CCCCChHHHH
Confidence 79999999999999999999999987777777777 776420003334433211 1111222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccE-ecCCCccHH----HHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGI-TEENKCTEM----ARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGI-amg~~gte~----ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-..+.++++|| +.||..|.+.|+++. .+. .|... .+..||+++.++..|..++.
T Consensus 174 ~~~~~lg~~~~~~i~vGD-~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~s~~el~~~l~ 239 (243)
T 3qxg_A 174 MALKKGGLKADEAVVIEN-APLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFPSMQTLCDSWD 239 (243)
T ss_dssp HHHHHTTCCGGGEEEEEC-SHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEESCHHHHHHHHH
T ss_pred HHHHHcCCCHHHeEEEeC-CHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEECCHHHHHHHHH
Confidence 222322222356999999 999999999999954 444 34322 23469999988888877664
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00013 Score=76.93 Aligned_cols=118 Identities=12% Similarity=0.016 Sum_probs=83.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|+ .|+++.++|+.....+..+.+.+|+... -..++.+++.. ...| |.
T Consensus 109 ~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~------------------~~kp--~~ 165 (240)
T 3qnm_A 109 MPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRY--FKKIILSEDLG------------------VLKP--RP 165 (240)
T ss_dssp STTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGTT------------------CCTT--SH
T ss_pred CccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhh--ceeEEEeccCC------------------CCCC--CH
Confidence 799999999999 9999999999999999999999988642 12222222211 1111 22
Q ss_pred HHH-HHHHhC---CCEEEEEeCCCC-CCHHHHhhCCccEecCCCccH-HHHhccchhhcccccHHHHH
Q 043360 784 LLV-QSVKEK---GHVVAFFGGSST-RDTPALKEADVGITEENKCTE-MARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV-~~lq~~---g~~Va~iGD~G~-ND~~aLk~AdVGIamg~~gte-~ak~aADivl~~f~~I~~li 845 (1108)
.++ +.+++. .+.++++|| +. ||..|.+.|+++++|...+.. ..+..+|+++.++..+..+.
T Consensus 166 ~~~~~~~~~lgi~~~~~~~iGD-~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~~ 232 (240)
T 3qnm_A 166 EIFHFALSATQSELRESLMIGD-SWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLL 232 (240)
T ss_dssp HHHHHHHHHTTCCGGGEEEEES-CTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHHT
T ss_pred HHHHHHHHHcCCCcccEEEECC-CchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHHH
Confidence 222 233333 357999999 95 999999999999998755542 34567899988877776653
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00015 Score=75.90 Aligned_cols=113 Identities=12% Similarity=0.049 Sum_probs=80.7
Q ss_pred ccchHHHHHHHHHcC-CEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNAG-VRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aG-I~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
.|++.+.++.|++.| +++.++|+.....+..+.+.+|+... ... +++...| |
T Consensus 107 ~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~--f~~-----------------------~~~~~kp--k 159 (234)
T 3ddh_A 107 LPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPY--FDH-----------------------IEVMSDK--T 159 (234)
T ss_dssp CTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGG--CSE-----------------------EEEESCC--S
T ss_pred CccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhh--hhe-----------------------eeecCCC--C
Confidence 799999999999999 99999999998888899999988541 011 2333333 4
Q ss_pred HHHHHHHHhC----CCEEEEEeCCCC-CCHHHHhhCCccEec-------CCCccHHHHhc-cchhhcccccHHHHH
Q 043360 783 LLLVQSVKEK----GHVVAFFGGSST-RDTPALKEADVGITE-------ENKCTEMAREC-SDIVISAVGSLLPIL 845 (1108)
Q Consensus 783 ~~iV~~lq~~----g~~Va~iGD~G~-ND~~aLk~AdVGIam-------g~~gte~ak~a-ADivl~~f~~I~~li 845 (1108)
...++.+.++ .+.++++|| +. ||..|.+.|++++++ | .+.+..+.. +|+++.++..+..++
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD-~~~~Di~~a~~aG~~~v~v~~~~~~g-~~~~~~~~~~~d~v~~~l~el~~~l 233 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGN-SFKSDIQPVLSLGGYGVHIPFEVMWK-HEVTETFAHERLKQVKRLDDLLSLL 233 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEES-CCCCCCHHHHHHTCEEEECCCCTTCC-CC---CCCCTTEEECSSGGGHHHHC
T ss_pred HHHHHHHHHHhCCCcceEEEECC-CcHHHhHHHHHCCCeEEEecCCcccc-cCCcccccCCCceecccHHHHHHhc
Confidence 4444443332 357999999 96 999999999999885 2 222222333 489888888887654
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00015 Score=76.50 Aligned_cols=119 Identities=11% Similarity=0.020 Sum_probs=84.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++. +++.++|+.....+..+.+.+|+... ...++.+.+.. ...| |.
T Consensus 105 ~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~------------------~~kp--~~ 161 (238)
T 3ed5_A 105 IDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPF--FKDIFVSEDTG------------------FQKP--MK 161 (238)
T ss_dssp CTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGG--CSEEEEGGGTT------------------SCTT--CH
T ss_pred CccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhh--hheEEEecccC------------------CCCC--Ch
Confidence 79999999999999 99999999999999999999988642 12222222211 1111 12
Q ss_pred HHHH-HHHhCC----CEEEEEeCCCC-CCHHHHhhCCccEe-cCCCc--cHHHHhccchhhcccccHHHHHHh
Q 043360 784 LLVQ-SVKEKG----HVVAFFGGSST-RDTPALKEADVGIT-EENKC--TEMARECSDIVISAVGSLLPILKL 847 (1108)
Q Consensus 784 ~iV~-~lq~~g----~~Va~iGD~G~-ND~~aLk~AdVGIa-mg~~g--te~ak~aADivl~~f~~I~~li~~ 847 (1108)
..++ .+++.| +.++++|| +. ||..|.+.|+++.. ++ .| .+..+..+|+++.++..+.+++..
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD-~~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~ad~v~~~~~el~~~l~~ 232 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGD-SLTADIKGGQLAGLDTCWMN-PDMKPNVPEIIPTYEIRKLEELYHILNI 232 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEES-CTTTTHHHHHHTTCEEEEEC-TTCCCCTTCCCCSEEESSGGGHHHHHTC
T ss_pred HHHHHHHHHcCCCChhHeEEECC-CcHHHHHHHHHCCCEEEEEC-CCCCCCcccCCCCeEECCHHHHHHHHHh
Confidence 2232 333334 57999999 98 99999999999643 33 33 444567789999999999988764
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.42 E-value=2.7e-05 Score=83.59 Aligned_cols=118 Identities=12% Similarity=0.103 Sum_probs=77.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHH-HHcCCCCCCCCccccchh--hhhhcCHHHHHHHhcccceecccCHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVA-CELGNFRPESNDIALEGE--QFRELNSTERMAKLDSMTLMGSCLAD 780 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA-~~~GI~~~~~~~~vi~G~--~l~~l~~~~~~~~~~~~~V~ar~sP~ 780 (1108)
.|++.+.++.|++.|+++.++|+.....+...- +..|+... -..++.++ +. .+..|
T Consensus 114 ~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~--f~~~~~~~~~~~------------------~~~Kp- 172 (250)
T 3l5k_A 114 MPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL--FSHIVLGDDPEV------------------QHGKP- 172 (250)
T ss_dssp CTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT--SSCEECTTCTTC------------------CSCTT-
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh--eeeEEecchhhc------------------cCCCC-
Confidence 899999999999999999999999866554432 22233221 11122221 10 11112
Q ss_pred hHHHHHH-HHHhCC-----CEEEEEeCCCCCCHHHHhhCC---ccEecCCCccHHHHhccchhhcccccHHHHH
Q 043360 781 DKLLLVQ-SVKEKG-----HVVAFFGGSSTRDTPALKEAD---VGITEENKCTEMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 781 ~K~~iV~-~lq~~g-----~~Va~iGD~G~ND~~aLk~Ad---VGIamg~~gte~ak~aADivl~~f~~I~~li 845 (1108)
|.++++ .+++.| +.++++|| +.||..|.+.|+ |++++| ++.+..+..||+++.++..+...+
T Consensus 173 -~~~~~~~~~~~lgi~~~~~~~i~iGD-~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~sl~el~~~l 243 (250)
T 3l5k_A 173 -DPDIFLACAKRFSPPPAMEKCLVFED-APNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLNSLQDFQPEL 243 (250)
T ss_dssp -STHHHHHHHHTSSSCCCGGGEEEEES-SHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECSCGGGCCGGG
T ss_pred -ChHHHHHHHHHcCCCCCcceEEEEeC-CHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeecCHHHhhHHH
Confidence 122333 333333 67999999 999999999999 677777 555667788999998777765543
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00017 Score=76.93 Aligned_cols=122 Identities=16% Similarity=0.148 Sum_probs=80.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|+.....+..+-+.+|+. . -..++.+++.. ...-.|+-=.
T Consensus 112 ~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~--f~~~~~~~~~~----------------~~Kp~p~~~~ 172 (240)
T 2hi0_A 112 FPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S--FDFALGEKSGI----------------RRKPAPDMTS 172 (240)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T--CSEEEEECTTS----------------CCTTSSHHHH
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c--eeEEEecCCCC----------------CCCCCHHHHH
Confidence 789999999999999999999999988888888899875 2 22333332210 0011111111
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc---EecCCCccHH-HHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG---ITEENKCTEM-ARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG---Iamg~~gte~-ak~aADivl~~f~~I~~li 845 (1108)
.+.+.+.-..+.++|+|| +.||+.|.+.|++. +++|....+. .+..+|+++.++..+...+
T Consensus 173 ~~~~~l~~~~~~~~~vGD-s~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 173 ECVKVLGVPRDKCVYIGD-SEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAI 237 (240)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHHHH
T ss_pred HHHHHcCCCHHHeEEEcC-CHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHHHh
Confidence 222222222356999999 99999999999994 5555222133 3346898888877776654
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00026 Score=74.54 Aligned_cols=135 Identities=12% Similarity=0.057 Sum_probs=81.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCc---------------HHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDE---------------LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 768 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~---------------~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~ 768 (1108)
.|++.++++.|+++|+++.++|+.. ...+..+.+++|+.- ...+..+...+....+ .
T Consensus 52 ~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---~~~~~~~~~~~~~~~~-----~ 123 (211)
T 2gmw_A 52 IDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL---DGIYYCPHHPQGSVEE-----F 123 (211)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC---SEEEEECCBTTCSSGG-----G
T ss_pred CcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce---EEEEECCcCCCCcccc-----c
Confidence 7999999999999999999999998 467777888888741 1111111000000000 0
Q ss_pred cccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc----cEecCCCccHHHHhccchhhcccccHHHH
Q 043360 769 DSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADV----GITEENKCTEMARECSDIVISAVGSLLPI 844 (1108)
Q Consensus 769 ~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV----GIamg~~gte~ak~aADivl~~f~~I~~l 844 (1108)
.....+..-.|+--..+.+.+.-..+.++|+|| +.||..+.+.|++ ++..|....+.....+|+++.++..+.++
T Consensus 124 ~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD-~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 124 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGD-KLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEES-SHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred CccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcC-CHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 000011112232223333333323456899999 9999999999995 44444322333345689998888888877
Q ss_pred HHh
Q 043360 845 LKL 847 (1108)
Q Consensus 845 i~~ 847 (1108)
+..
T Consensus 203 l~~ 205 (211)
T 2gmw_A 203 IKK 205 (211)
T ss_dssp HHC
T ss_pred HHh
Confidence 643
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00015 Score=75.04 Aligned_cols=120 Identities=12% Similarity=0.077 Sum_probs=82.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+ ++.|++. +++.++|+.....+..+.+.+|+... -..++.+.+.. ...-.|+--.
T Consensus 76 ~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 135 (201)
T 2w43_A 76 YEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRY--FKGIFSAESVK----------------EYKPSPKVYK 135 (201)
T ss_dssp CGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGGT----------------CCTTCHHHHH
T ss_pred CCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHh--CcEEEehhhcC----------------CCCCCHHHHH
Confidence 789999 9999999 99999999999999999999998642 12233332211 1111233333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCC---CccHHHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEEN---KCTEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~---~gte~ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+. ...++|+|| +.||..|.+.|+++.++-. ++.+..+..+|+++.++..+..++.
T Consensus 136 ~~~~~~~--~~~~~~vGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 198 (201)
T 2w43_A 136 YFLDSIG--AKEAFLVSS-NAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWIL 198 (201)
T ss_dssp HHHHHHT--CSCCEEEES-CHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHH
T ss_pred HHHHhcC--CCcEEEEeC-CHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHH
Confidence 4444444 467899999 9999999999999977511 2222223468888878777776653
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00012 Score=80.20 Aligned_cols=118 Identities=13% Similarity=0.038 Sum_probs=79.7
Q ss_pred ccchHHHHHHHHHc-CCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNA-GVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~a-GI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
.+++.+.++.|++. |+++.++|+.....+..+.+.+|+.. ...++.+++... ..-.|+--
T Consensus 116 ~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~---f~~i~~~~~~~~----------------~kp~~~~~ 176 (275)
T 2qlt_A 116 VPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR---PEYFITANDVKQ----------------GKPHPEPY 176 (275)
T ss_dssp CTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC---CSSEECGGGCSS----------------CTTSSHHH
T ss_pred CcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc---cCEEEEcccCCC----------------CCCChHHH
Confidence 79999999999999 99999999999999999999998853 234444443211 01112222
Q ss_pred HHHHHHHHh-------CCCEEEEEeCCCCCCHHHHhhCCccEec---CCCccHHHHhccchhhcccccH
Q 043360 783 LLLVQSVKE-------KGHVVAFFGGSSTRDTPALKEADVGITE---ENKCTEMARECSDIVISAVGSL 841 (1108)
Q Consensus 783 ~~iV~~lq~-------~g~~Va~iGD~G~ND~~aLk~AdVGIam---g~~gte~ak~aADivl~~f~~I 841 (1108)
..+.+.+.- ..+.++++|| +.||..|++.|++++++ |.+..+..+..||+++.++..+
T Consensus 177 ~~~~~~lgi~~~~~~~~~~~~i~~GD-s~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el 244 (275)
T 2qlt_A 177 LKGRNGLGFPINEQDPSKSKVVVFED-APAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESI 244 (275)
T ss_dssp HHHHHHTTCCCCSSCGGGSCEEEEES-SHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGE
T ss_pred HHHHHHcCCCccccCCCcceEEEEeC-CHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHc
Confidence 233333332 3346999999 99999999999966554 5332333334589988755544
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00018 Score=78.15 Aligned_cols=123 Identities=15% Similarity=0.100 Sum_probs=86.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.++++.|++.|+++.++|+.... +..+.+.+|+... -..++.+.+.. ...-.|+--.
T Consensus 108 ~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 168 (263)
T 3k1z_A 108 LDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREH--FDFVLTSEAAG----------------WPKPDPRIFQ 168 (263)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGG--CSCEEEHHHHS----------------SCTTSHHHHH
T ss_pred CcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHh--hhEEEeecccC----------------CCCCCHHHHH
Confidence 799999999999999999999987664 5788888998542 22333333221 1222333333
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCccEecCCCccHH-----HHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSST-RDTPALKEADVGITEENKCTEM-----ARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~-ND~~aLk~AdVGIamg~~gte~-----ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-....++|+|| +. ||+.|.+.|++++++...+... ....+|+++.++..+..++.
T Consensus 169 ~~~~~~g~~~~~~~~vGD-~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~ 236 (263)
T 3k1z_A 169 EALRLAHMEPVVAAHVGD-NYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALD 236 (263)
T ss_dssp HHHHHHTCCGGGEEEEES-CHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHH
T ss_pred HHHHHcCCCHHHEEEECC-CcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHH
Confidence 444444333467999999 97 9999999999999987544322 22368999998888888764
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.32 E-value=3.7e-05 Score=79.94 Aligned_cols=117 Identities=13% Similarity=0.057 Sum_probs=78.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccC--Hhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL--ADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~s--P~~ 781 (1108)
.|++.+.++.|++. +++.++|+.....+..+.+.+|+... -..++.+.+. .... |+-
T Consensus 85 ~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~------------------~~~KP~~~~ 143 (209)
T 2hdo_A 85 YPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR--MAVTISADDT------------------PKRKPDPLP 143 (209)
T ss_dssp CTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG--EEEEECGGGS------------------SCCTTSSHH
T ss_pred CCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh--ccEEEecCcC------------------CCCCCCcHH
Confidence 89999999999999 99999999999988888888887531 1122222211 1112 222
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCC---ccHHHHhccchhhcccccHHH
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENK---CTEMARECSDIVISAVGSLLP 843 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~---gte~ak~aADivl~~f~~I~~ 843 (1108)
-..+.+.+.-....++++|| +.||..|.+.|++++++... ..+..++ +|+++.++..+.+
T Consensus 144 ~~~~~~~~~~~~~~~i~vGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~ 206 (209)
T 2hdo_A 144 LLTALEKVNVAPQNALFIGD-SVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDILE 206 (209)
T ss_dssp HHHHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGGG
T ss_pred HHHHHHHcCCCcccEEEECC-ChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHHH
Confidence 22333333222457999999 99999999999999986421 2333434 8988877666654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00023 Score=76.07 Aligned_cols=121 Identities=15% Similarity=0.033 Sum_probs=84.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++. +++.++|+.....+..+.+.+|+.- ..++.++... ...-.|+--.
T Consensus 122 ~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f----~~~~~~~~~~----------------~~kp~~~~~~ 180 (254)
T 3umc_A 122 WPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW----DMLLCADLFG----------------HYKPDPQVYL 180 (254)
T ss_dssp CTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC----SEECCHHHHT----------------CCTTSHHHHH
T ss_pred CccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc----ceEEeecccc----------------cCCCCHHHHH
Confidence 78999999999985 9999999999999999999999852 2333332211 1111222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCC----CccH---H--HHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEEN----KCTE---M--ARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~----~gte---~--ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-..+.++++|| +.||..|.+.|+++++|.. .|.. . .+..+|+++.++..|..++.
T Consensus 181 ~~~~~lgi~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 181 GACRLLDLPPQEVMLCAA-HNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHTCCGGGEEEEES-CHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHHH
T ss_pred HHHHHcCCChHHEEEEcC-chHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHhc
Confidence 233333222457999999 9999999999999999874 2321 1 25678999988888887764
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00023 Score=74.55 Aligned_cols=119 Identities=12% Similarity=0.052 Sum_probs=79.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCC-ccccchhhhhhcCHHHHHHHhcccceec--ccCHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESN-DIALEGEQFRELNSTERMAKLDSMTLMG--SCLAD 780 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~-~~vi~G~~l~~l~~~~~~~~~~~~~V~a--r~sP~ 780 (1108)
.+++.+.++.++. ++.++|+........+.+++|+... - ..++.++... .. .-.|+
T Consensus 89 ~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~----------------~~~~kpk~~ 147 (229)
T 2fdr_A 89 IDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPY--FAPHIYSAKDLG----------------ADRVKPKPD 147 (229)
T ss_dssp CTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGG--TTTCEEEHHHHC----------------TTCCTTSSH
T ss_pred CcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHh--ccceEEeccccc----------------cCCCCcCHH
Confidence 6788888887764 9999999999999999999988642 1 2233332210 00 11122
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-EecCCCccH-------HHHhc-cchhhcccccHHHHH
Q 043360 781 DKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTE-------MAREC-SDIVISAVGSLLPIL 845 (1108)
Q Consensus 781 ~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG-Iamg~~gte-------~ak~a-ADivl~~f~~I~~li 845 (1108)
--..+.+.+.-..+.++++|| +.||..|++.|+++ ++++ ++.+ ..++. ||+++.++..+..++
T Consensus 148 ~~~~~~~~l~~~~~~~i~iGD-~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 148 IFLHGAAQFGVSPDRVVVVED-SVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp HHHHHHHHHTCCGGGEEEEES-SHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred HHHHHHHHcCCChhHeEEEcC-CHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 222233333322457899999 99999999999998 6676 4443 25555 999988888887765
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00021 Score=76.96 Aligned_cols=122 Identities=15% Similarity=0.162 Sum_probs=84.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|+ |+++.++|+.....+..+.+.+|+... ...++.+++.. ...-.|+--.
T Consensus 95 ~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 154 (253)
T 1qq5_A 95 YPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS--FDAVISVDAKR----------------VFKPHPDSYA 154 (253)
T ss_dssp CTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGGT----------------CCTTSHHHHH
T ss_pred CccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhh--ccEEEEccccC----------------CCCCCHHHHH
Confidence 799999999999 999999999999999999999998542 12222222211 1112222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCC-----------------------c---cHHHHhccchhhcc
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENK-----------------------C---TEMARECSDIVISA 837 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~-----------------------g---te~ak~aADivl~~ 837 (1108)
.+.+.+.-..+.++|+|| +.||..|.+.|+++.++... + .+..+..+|+++.+
T Consensus 155 ~~~~~~~~~~~~~~~vGD-~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (253)
T 1qq5_A 155 LVEEVLGVTPAEVLFVSS-NGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPA 233 (253)
T ss_dssp HHHHHHCCCGGGEEEEES-CHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESS
T ss_pred HHHHHcCCCHHHEEEEeC-ChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCC
Confidence 333333222356899999 99999999999999887633 1 12233568888888
Q ss_pred cccHHHHHH
Q 043360 838 VGSLLPILK 846 (1108)
Q Consensus 838 f~~I~~li~ 846 (1108)
+..+.+++.
T Consensus 234 ~~el~~~l~ 242 (253)
T 1qq5_A 234 LGDLPRLVR 242 (253)
T ss_dssp GGGHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887764
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00028 Score=74.98 Aligned_cols=118 Identities=13% Similarity=0.065 Sum_probs=85.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++. +++.++|+.....+..+.+.+|+.- ..++.++... ...|. .
T Consensus 118 ~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f----~~~~~~~~~~------------------~~kp~--~ 172 (254)
T 3umg_A 118 WPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW----DVIIGSDINR------------------KYKPD--P 172 (254)
T ss_dssp CTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC----SCCCCHHHHT------------------CCTTS--H
T ss_pred CcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe----eEEEEcCcCC------------------CCCCC--H
Confidence 79999999999997 9999999999999999999999852 2333333221 12222 2
Q ss_pred HHHH-HHHhC---CCEEEEEeCCCCCCHHHHhhCCccEecCCC----ccH----H-HHhccchhhcccccHHHHHHh
Q 043360 784 LLVQ-SVKEK---GHVVAFFGGSSTRDTPALKEADVGITEENK----CTE----M-ARECSDIVISAVGSLLPILKL 847 (1108)
Q Consensus 784 ~iV~-~lq~~---g~~Va~iGD~G~ND~~aLk~AdVGIamg~~----gte----~-ak~aADivl~~f~~I~~li~~ 847 (1108)
..++ .+++. .+.++++|| +.||..|.+.|+++++|... |.. . .+..+|+++.++..+..++..
T Consensus 173 ~~~~~~~~~lgi~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 173 QAYLRTAQVLGLHPGEVMLAAA-HNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHTTCCGGGEEEEES-CHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEeC-ChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 2222 33333 357999999 99999999999999998742 211 1 256789999999999888754
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00026 Score=74.42 Aligned_cols=121 Identities=9% Similarity=0.061 Sum_probs=84.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++ |+++.++|+.....+..+.+.++-. -..++.+.++. ...-.|+-..
T Consensus 101 ~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~----fd~i~~~~~~~----------------~~KP~~~~~~ 159 (240)
T 3smv_A 101 FPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE----FDHIITAQDVG----------------SYKPNPNNFT 159 (240)
T ss_dssp CTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC----CSEEEEHHHHT----------------SCTTSHHHHH
T ss_pred CCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc----cCEEEEccccC----------------CCCCCHHHHH
Confidence 7999999999999 8999999999888777776654421 23344443321 1223444434
Q ss_pred HHHHHHHhC---CCEEEEEeCCCC-CCHHHHhhCCccEecCCCc----------cHHHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEK---GHVVAFFGGSST-RDTPALKEADVGITEENKC----------TEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~-ND~~aLk~AdVGIamg~~g----------te~ak~aADivl~~f~~I~~li~ 846 (1108)
..++.+++. .+.++++|| +. ||..|.+.|+++++|...+ .+..+..+|+++.++..+.+++.
T Consensus 160 ~~l~~~~~lgi~~~~~~~vGD-~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l~ 235 (240)
T 3smv_A 160 YMIDALAKAGIEKKDILHTAE-SLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAHK 235 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEES-CTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHHH
T ss_pred HHHHHHHhcCCCchhEEEECC-CchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHHH
Confidence 444434444 357999999 96 9999999999999985322 12344778999988888877764
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00038 Score=70.82 Aligned_cols=104 Identities=15% Similarity=-0.008 Sum_probs=68.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|++.. .+..+.+.+|+... -..++.+.+ +.+..| |.
T Consensus 84 ~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~--f~~~~~~~~------------------~~~~kp--~~ 140 (190)
T 2fi1_A 84 FEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAY--FTEVVTSSS------------------GFKRKP--NP 140 (190)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGG--EEEEECGGG------------------CCCCTT--SC
T ss_pred CcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhh--eeeeeeccc------------------cCCCCC--CH
Confidence 79999999999999999999998764 56777788887531 112222221 111122 12
Q ss_pred HHHH-HHHhCCC-EEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccc
Q 043360 784 LLVQ-SVKEKGH-VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD 832 (1108)
Q Consensus 784 ~iV~-~lq~~g~-~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aAD 832 (1108)
..++ .+++.|- .++++|| +.||..|++.|++++++-.. ....++..+
T Consensus 141 ~~~~~~~~~~~~~~~~~iGD-~~~Di~~a~~aG~~~~~~~~-~~~~~~~l~ 189 (190)
T 2fi1_A 141 ESMLYLREKYQISSGLVIGD-RPIDIEAGQAAGLDTHLFTS-IVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHHTTCSSEEEEES-SHHHHHHHHHTTCEEEECSC-HHHHHHHHT
T ss_pred HHHHHHHHHcCCCeEEEEcC-CHHHHHHHHHcCCeEEEECC-CCChhhccC
Confidence 2222 2333332 6899999 99999999999999887633 344444443
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0059 Score=62.92 Aligned_cols=51 Identities=10% Similarity=0.094 Sum_probs=35.8
Q ss_pred CcccccceEEEEEEECCc--ccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHc
Q 043360 523 GGLVCNRVDVSKFCIGEK--DVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSR 587 (1108)
Q Consensus 523 GTLT~n~m~v~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~ 587 (1108)
||||+|+++|..+..... .+. ..+++.+...+ +..+.||+.+|+++++++.
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~-------~~~lL~laaa~-------E~~SeHPlA~AIv~~a~~~ 53 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRIS-------HHKILAIVGTA-------ESNSEHPLGTAITKYCKQE 53 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSC-------HHHHHHHHHHG-------GGSSSCHHHHHHHHHHHHH
T ss_pred CCCcCCcEEEEEEEecCCcCCCC-------HHHHHHHHHHH-------HccCCCHHHHHHHHHHHhh
Confidence 899999999999976431 111 12344443333 5778999999999999754
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00036 Score=72.92 Aligned_cols=115 Identities=14% Similarity=0.061 Sum_probs=80.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++ |+++.++|+.....+..+-+.+|+... ...+ +.+.-.+.-|.
T Consensus 86 ~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~--f~~i----------------------~~~~~~~Kp~p 140 (210)
T 2ah5_A 86 FPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHF--FDGI----------------------YGSSPEAPHKA 140 (210)
T ss_dssp CTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGG--CSEE----------------------EEECSSCCSHH
T ss_pred CCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhh--eeee----------------------ecCCCCCCCCh
Confidence 7999999999999 999999999998888888899998642 1111 11111112234
Q ss_pred HHHHH-HHhCC---CEEEEEeCCCCCCHHHHhhCCc---cEecCCCccHHHH-hccchhhcccccHHHH
Q 043360 784 LLVQS-VKEKG---HVVAFFGGSSTRDTPALKEADV---GITEENKCTEMAR-ECSDIVISAVGSLLPI 844 (1108)
Q Consensus 784 ~iV~~-lq~~g---~~Va~iGD~G~ND~~aLk~AdV---GIamg~~gte~ak-~aADivl~~f~~I~~l 844 (1108)
++.+. +++.| +.++|+|| +.||+.|.++|++ |+++|....+..+ ..+|+++.++..+..+
T Consensus 141 ~~~~~~~~~lg~~p~~~~~vgD-s~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 141 DVIHQALQTHQLAPEQAIIIGD-TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECC-CHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 44433 33333 46999999 9999999999999 7777732233333 3589988877776654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0002 Score=77.06 Aligned_cols=57 Identities=14% Similarity=0.238 Sum_probs=47.4
Q ss_pred hHHHHHHHHHhC-CCEEEEEeCCCCCCHHHHhhC--CccEecCCCccHHHHhccchhhcc---cccHHHHH
Q 043360 781 DKLLLVQSVKEK-GHVVAFFGGSSTRDTPALKEA--DVGITEENKCTEMARECSDIVISA---VGSLLPIL 845 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g~~Va~iGD~G~ND~~aLk~A--dVGIamg~~gte~ak~aADivl~~---f~~I~~li 845 (1108)
+|..-++.|.+. | |+++|| +.||.+||+.| ++||||| ++ ++.||+++.+ -..+.++|
T Consensus 160 ~Kg~al~~l~~~~g--via~GD-~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l 222 (239)
T 1u02_A 160 NKGSAIRSVRGERP--AIIAGD-DATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFI 222 (239)
T ss_dssp CHHHHHHHHHTTSC--EEEEES-SHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCC--eEEEeC-CCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHH
Confidence 799999999877 6 999999 99999999999 9999999 55 5778887764 44455544
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0014 Score=70.11 Aligned_cols=116 Identities=9% Similarity=0.045 Sum_probs=79.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH--hh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA--DD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP--~~ 781 (1108)
.|++.+.++.|+ .|+++.++|+.....+....+.+|+... ... +++...| +-
T Consensus 114 ~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~--f~~-----------------------i~~~~kp~~~~ 167 (251)
T 2pke_A 114 IAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDL--FPR-----------------------IEVVSEKDPQT 167 (251)
T ss_dssp CTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGT--CCC-----------------------EEEESCCSHHH
T ss_pred CccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHh--Cce-----------------------eeeeCCCCHHH
Confidence 799999999999 9999999999998888888888887532 011 2222222 22
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCccEecCCCccH--------HHHhccch-hhcccccHHHHHH
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSST-RDTPALKEADVGITEENKCTE--------MARECSDI-VISAVGSLLPILK 846 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~-ND~~aLk~AdVGIamg~~gte--------~ak~aADi-vl~~f~~I~~li~ 846 (1108)
-..+.+.+.-..+.++++|| +. ||..|.+.|++++++=..|.. .....+|+ ++.++..+..++.
T Consensus 168 ~~~~~~~l~~~~~~~i~iGD-~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 241 (251)
T 2pke_A 168 YARVLSEFDLPAERFVMIGN-SLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHTCCGGGEEEEES-CCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHHH
T ss_pred HHHHHHHhCcCchhEEEECC-CchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHHH
Confidence 23333333323457999999 99 999999999999774323321 11245787 7778888877653
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00062 Score=69.99 Aligned_cols=87 Identities=14% Similarity=0.142 Sum_probs=63.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCc-HHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDE-LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~-~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
.|++.++++.|++.|+++.++||.. ...+..+.+.+|+... -. .+.++ +..|
T Consensus 70 ~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~--f~---------------------~~~~~----~~~k 122 (187)
T 2wm8_A 70 YPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRY--FV---------------------HREIY----PGSK 122 (187)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTT--EE---------------------EEEES----SSCH
T ss_pred chhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhh--cc---------------------eeEEE----eCch
Confidence 8999999999999999999999998 7999999999998652 00 00011 1223
Q ss_pred HHHHH-HHHhC---CCEEEEEeCCCCCCHHHHhhCCccEe
Q 043360 783 LLLVQ-SVKEK---GHVVAFFGGSSTRDTPALKEADVGIT 818 (1108)
Q Consensus 783 ~~iV~-~lq~~---g~~Va~iGD~G~ND~~aLk~AdVGIa 818 (1108)
....+ .+++. .+.++++|| +.||+.+.++|++...
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~igD-~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 123 ITHFERLQQKTGIPFSQMIFFDD-ERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEES-CHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHcCCChHHEEEEeC-CccChHHHHHcCCEEE
Confidence 33332 33333 356899999 9999999999987643
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0024 Score=66.43 Aligned_cols=124 Identities=16% Similarity=0.202 Sum_probs=82.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.++++.|++.|+++.++|+.....+..+-+.+|+... -+.++.+.+.. ...-.|+-=.
T Consensus 86 ~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~--fd~~~~~~~~~----------------~~KP~p~~~~ 147 (216)
T 3kbb_A 86 NPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKY--FDVMVFGDQVK----------------NGKPDPEIYL 147 (216)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECGGGSS----------------SCTTSTHHHH
T ss_pred CccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcc--ccccccccccC----------------CCcccHHHHH
Confidence 79999999999999999999999999999999999998752 22333333221 1111222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc----EecCCCccHHHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG----ITEENKCTEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG----Iamg~~gte~ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-.-+.++|||| ..+|+.+-++|++. +.-|.+..+.-+++.+..+.+...+.+.++
T Consensus 148 ~a~~~lg~~p~e~l~VgD-s~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli~~l~ 213 (216)
T 3kbb_A 148 LVLERLNVVPEKVVVFED-SKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLK 213 (216)
T ss_dssp HHHHHHTCCGGGEEEEEC-SHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHHHHHH
T ss_pred HHHHhhCCCccceEEEec-CHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHHHHHH
Confidence 233333323456999999 99999999999974 334444445555555555556666666553
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0013 Score=67.60 Aligned_cols=102 Identities=7% Similarity=-0.058 Sum_probs=71.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.| ++.++|+.....+..+.+.+|+... -..++.+.+.. ...-.|+--.
T Consensus 88 ~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~--f~~~~~~~~~~----------------~~Kp~~~~~~ 148 (200)
T 3cnh_A 88 RPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEF--LLAFFTSSALG----------------VMKPNPAMYR 148 (200)
T ss_dssp CHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGT--CSCEEEHHHHS----------------CCTTCHHHHH
T ss_pred CccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHh--cceEEeecccC----------------CCCCCHHHHH
Confidence 799999999999999 9999999999999999999997542 12233333211 1122233223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTE 825 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte 825 (1108)
.+.+.+.-..+.++++|| +.||..|.+.|++...+-..|..
T Consensus 149 ~~~~~~~~~~~~~~~vgD-~~~Di~~a~~aG~~~~~~~~~~~ 189 (200)
T 3cnh_A 149 LGLTLAQVRPEEAVMVDD-RLQNVQAARAVGMHAVQCVDAAQ 189 (200)
T ss_dssp HHHHHHTCCGGGEEEEES-CHHHHHHHHHTTCEEEECSCHHH
T ss_pred HHHHHcCCCHHHeEEeCC-CHHHHHHHHHCCCEEEEECCchh
Confidence 333444333457999999 99999999999998876534433
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0021 Score=69.67 Aligned_cols=40 Identities=25% Similarity=0.182 Sum_probs=33.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecC---CcHHHHHHHHHHcCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSE---DELLAVTEVACELGNFR 743 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTG---D~~~tA~~IA~~~GI~~ 743 (1108)
-|+++++|++++++|+++.++|| ..........+++|+..
T Consensus 26 ~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 26 IPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 46799999999999999999999 66777777778888853
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0026 Score=65.43 Aligned_cols=131 Identities=13% Similarity=0.097 Sum_probs=85.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcH---HHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDEL---LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAD 780 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~---~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~ 780 (1108)
.|++.++++.|+++|+++.++|+-.. ..+..+.+.+|+... -..++.+.+... ..-...-.|+
T Consensus 36 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~~------------~~~~~KP~p~ 101 (189)
T 3ib6_A 36 RKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDY--FDFIYASNSELQ------------PGKMEKPDKT 101 (189)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGG--EEEEEECCTTSS------------TTCCCTTSHH
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhh--eEEEEEcccccc------------ccCCCCcCHH
Confidence 89999999999999999999998765 888999999998642 111221111000 0001112233
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCC-CCCHHHHhhCCccEe-cCCCccHH------HHhccchhhc--ccccHHHHHHhhhh
Q 043360 781 DKLLLVQSVKEKGHVVAFFGGSS-TRDTPALKEADVGIT-EENKCTEM------ARECSDIVIS--AVGSLLPILKLGRC 850 (1108)
Q Consensus 781 ~K~~iV~~lq~~g~~Va~iGD~G-~ND~~aLk~AdVGIa-mg~~gte~------ak~aADivl~--~f~~I~~li~~GR~ 850 (1108)
--..+.+.+.-....++|||| . .+|+.+-++|++... +. .+... ....+|+++. ++..+..++...+.
T Consensus 102 ~~~~~~~~~~~~~~~~l~VGD-~~~~Di~~A~~aG~~~i~v~-~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~~ 179 (189)
T 3ib6_A 102 IFDFTLNALQIDKTEAVMVGN-TFESDIIGANRAGIHAIWLQ-NPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLKK 179 (189)
T ss_dssp HHHHHHHHHTCCGGGEEEEES-BTTTTHHHHHHTTCEEEEEC-CTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECC-CcHHHHHHHHHCCCeEEEEC-CccccccccccccCCCcceeccccHHhHHHHHHHHHH
Confidence 333344444333467999999 9 799999999998754 33 22211 1126799998 99999988765443
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.00081 Score=70.90 Aligned_cols=128 Identities=16% Similarity=0.053 Sum_probs=76.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcH---------------HHHHHHHHHcCCCCCCCCccc--cchhhhhhcCHHHHHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDEL---------------LAVTEVACELGNFRPESNDIA--LEGEQFRELNSTERMA 766 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~~IA~~~GI~~~~~~~~v--i~G~~l~~l~~~~~~~ 766 (1108)
.|++.++++.|+++|+++.++|+... ..+..+.+++|+.-. ... ..+.. ..+. +
T Consensus 58 ~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---~~~~~~~~~~-g~~~-----~ 128 (218)
T 2o2x_A 58 RPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD---MVLACAYHEA-GVGP-----L 128 (218)
T ss_dssp CGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCCTT-CCST-----T
T ss_pred CcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee---eEEEeecCCC-Ccee-----e
Confidence 79999999999999999999999987 677788888887411 100 00000 0000 0
Q ss_pred HhcccceecccCHhhHHHHHH-HHHhC---CCEEEEEeCCCCCCHHHHhhCCccE-e-c--CCCccHHHHhccchhhccc
Q 043360 767 KLDSMTLMGSCLADDKLLLVQ-SVKEK---GHVVAFFGGSSTRDTPALKEADVGI-T-E--ENKCTEMARECSDIVISAV 838 (1108)
Q Consensus 767 ~~~~~~V~ar~sP~~K~~iV~-~lq~~---g~~Va~iGD~G~ND~~aLk~AdVGI-a-m--g~~gte~ak~aADivl~~f 838 (1108)
.. .-...-.| |..+.+ .+++. .+.++|||| +.||..+.+.|++.. . + |....+.....+|+++.++
T Consensus 129 ~~---~~~~~~KP--~~~~~~~~~~~~~i~~~~~~~VGD-~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l 202 (218)
T 2o2x_A 129 AI---PDHPMRKP--NPGMLVEAGKRLALDLQRSLIVGD-KLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSEL 202 (218)
T ss_dssp CC---SSCTTSTT--SCHHHHHHHHHHTCCGGGCEEEES-SHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHH
T ss_pred cc---cCCccCCC--CHHHHHHHHHHcCCCHHHEEEEeC-CHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccH
Confidence 00 00001112 112222 22222 356899999 999999999999764 3 2 3111112224578888888
Q ss_pred ccHHHHHH
Q 043360 839 GSLLPILK 846 (1108)
Q Consensus 839 ~~I~~li~ 846 (1108)
..+..++.
T Consensus 203 ~el~~~l~ 210 (218)
T 2o2x_A 203 GDLLAAIE 210 (218)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777654
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.001 Score=68.87 Aligned_cols=101 Identities=12% Similarity=0.010 Sum_probs=67.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHH------cCCCCCCCCccccchhhhhhcCHHHHHHHhcccceeccc
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE------LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 777 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~------~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~ 777 (1108)
.|++.+.++.|++ |+++.++|+.....+..+.+. .|+... -..++.+.+.. ...-
T Consensus 91 ~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~--f~~~~~~~~~~----------------~~Kp 151 (211)
T 2i6x_A 91 SAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF--FDKVYASCQMG----------------KYKP 151 (211)
T ss_dssp CHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG--SSEEEEHHHHT----------------CCTT
T ss_pred ChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH--cCeEEeecccC----------------CCCC
Confidence 7999999999999 999999999888887777766 565431 12222222111 1112
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCcc
Q 043360 778 LADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCT 824 (1108)
Q Consensus 778 sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gt 824 (1108)
.|+--..+.+.+.-..+.++++|| +.||..|.+.|+++.++...+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~igD-~~~Di~~a~~aG~~~~~~~~~~ 197 (211)
T 2i6x_A 152 NEDIFLEMIADSGMKPEETLFIDD-GPANVATAERLGFHTYCPDNGE 197 (211)
T ss_dssp SHHHHHHHHHHHCCCGGGEEEECS-CHHHHHHHHHTTCEEECCCTTC
T ss_pred CHHHHHHHHHHhCCChHHeEEeCC-CHHHHHHHHHcCCEEEEECCHH
Confidence 222223333333323457999999 9999999999999998874443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0012 Score=63.41 Aligned_cols=94 Identities=13% Similarity=0.035 Sum_probs=63.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.++++.|++.|+++.++|+.....+..+.+.+|+... -..++.+.+.. ...-.|+--.
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~----------------~~Kp~~~~~~ 81 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGV--VDKVLLSGELG----------------VEKPEEAAFQ 81 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTS--SSEEEEHHHHS----------------CCTTSHHHHH
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhh--ccEEEEeccCC----------------CCCCCHHHHH
Confidence 78999999999999999999999998888888888887542 22233222211 1112222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
.+.+.+.-..+.+.|+|| +.+|..+.++|++-
T Consensus 82 ~~~~~~~~~~~~~~~vgD-~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 82 AAADAIDLPMRDCVLVDD-SILNVRGAVEAGLV 113 (137)
T ss_dssp HHHHHTTCCGGGEEEEES-CHHHHHHHHHHTCE
T ss_pred HHHHHcCCCcccEEEEcC-CHHHHHHHHHCCCE
Confidence 222222222346899999 99999999999874
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0027 Score=66.49 Aligned_cols=117 Identities=17% Similarity=0.169 Sum_probs=74.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++. +++.++|+.... -+.+|+... -..++.+.+.. ...-.|+--.
T Consensus 107 ~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~--f~~~~~~~~~~----------------~~kp~~~~~~ 162 (230)
T 3vay_A 107 FPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY--FAFALCAEDLG----------------IGKPDPAPFL 162 (230)
T ss_dssp CTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG--CSEEEEHHHHT----------------CCTTSHHHHH
T ss_pred CcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH--eeeeEEccccC----------------CCCcCHHHHH
Confidence 79999999999998 999999987654 234454321 11222222110 1111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCccEec---CCCccHHHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSST-RDTPALKEADVGITE---ENKCTEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~-ND~~aLk~AdVGIam---g~~gte~ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-....++++|| +. ||+.|.+.|+++.++ |....+. +..+|+++.++..+.+++.
T Consensus 163 ~~~~~~~~~~~~~~~vGD-~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~l~el~~~l~ 227 (230)
T 3vay_A 163 EALRRAKVDASAAVHVGD-HPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESSGGGHHHHHH
T ss_pred HHHHHhCCCchheEEEeC-ChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECCHHHHHHHHH
Confidence 333333323457999999 97 999999999998775 2122222 5678999999999888764
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0036 Score=67.75 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=37.7
Q ss_pred CEEEEEeCCC-CCCHHHHhhCCccEecCCC---ccHHHHh---ccchhhcccccHHHHHH
Q 043360 794 HVVAFFGGSS-TRDTPALKEADVGITEENK---CTEMARE---CSDIVISAVGSLLPILK 846 (1108)
Q Consensus 794 ~~Va~iGD~G-~ND~~aLk~AdVGIamg~~---gte~ak~---aADivl~~f~~I~~li~ 846 (1108)
+.++|+|| + .||..|++.|+++.++... +.+..++ .+|+++.++..+..-+.
T Consensus 201 ~~~~~iGD-~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~ 259 (266)
T 3pdw_A 201 SETLMVGD-NYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIE 259 (266)
T ss_dssp GGEEEEES-CTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHHH
T ss_pred hhEEEECC-CcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhh
Confidence 57999999 9 7999999999987664322 3333444 49999988888877653
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0026 Score=68.62 Aligned_cols=40 Identities=18% Similarity=0.353 Sum_probs=33.5
Q ss_pred CEEEEEeCC---CCCCHHHHhhCC-ccEecCCCccHHHHhccchh
Q 043360 794 HVVAFFGGS---STRDTPALKEAD-VGITEENKCTEMARECSDIV 834 (1108)
Q Consensus 794 ~~Va~iGD~---G~ND~~aLk~Ad-VGIamg~~gte~ak~aADiv 834 (1108)
+.|+++||. |.||.+||+.|+ +|++|+ ++.|..|..+++.
T Consensus 200 ~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~~ 243 (246)
T 3f9r_A 200 EEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKII 243 (246)
T ss_dssp SEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHHH
T ss_pred ccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHHh
Confidence 568999994 499999999996 899999 7888887766654
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0046 Score=66.96 Aligned_cols=123 Identities=13% Similarity=0.103 Sum_probs=82.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.++++.|++ ++++.++|+.....+..+.+.+|+... -..++.+.+.. ...-.|+--.
T Consensus 123 ~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~----------------~~KP~p~~~~ 183 (260)
T 2gfh_A 123 ADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY--FDAIVIGGEQK----------------EEKPAPSIFY 183 (260)
T ss_dssp CHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGSS----------------SCTTCHHHHH
T ss_pred CcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhh--hheEEecCCCC----------------CCCCCHHHHH
Confidence 7999999999998 699999999999999999999998642 12223332211 1111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCC-CCCHHHHhhCCc--cEecCCCccH--HHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSS-TRDTPALKEADV--GITEENKCTE--MARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G-~ND~~aLk~AdV--GIamg~~gte--~ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-....++|+|| . .||+.+-+.|++ .|.++..+.+ .....+|+++.++..+..++.
T Consensus 184 ~~~~~~~~~~~~~~~vGD-s~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 250 (260)
T 2gfh_A 184 HCCDLLGVQPGDCVMVGD-TLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQ 250 (260)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHH
T ss_pred HHHHHcCCChhhEEEECC-CchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHHH
Confidence 333333322457999999 8 899999999999 5766532221 123457888888888877653
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.11 E-value=0.00083 Score=69.20 Aligned_cols=103 Identities=17% Similarity=0.101 Sum_probs=61.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHH-cCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE-LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~-~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
.|++.+.++.|++.|+++.++|+.....+..+.+. .|+... -..++.+.+. -...-.|+--
T Consensus 93 ~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~--f~~~~~~~~~----------------~~~Kp~~~~~ 154 (206)
T 2b0c_A 93 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYLSQDL----------------GMRKPEARIY 154 (206)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH--CSEEEEHHHH----------------TCCTTCHHHH
T ss_pred CccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh--eeeEEEeccc----------------CCCCCCHHHH
Confidence 89999999999999999999998654433222222 222110 0011111110 0111123233
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccH
Q 043360 783 LLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTE 825 (1108)
Q Consensus 783 ~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte 825 (1108)
..+.+.+.-..+.++++|| +.||..|.+.|++...+...+.+
T Consensus 155 ~~~~~~~~~~~~~~~~vgD-~~~Di~~a~~aG~~~~~~~~~~~ 196 (206)
T 2b0c_A 155 QHVLQAEGFSPSDTVFFDD-NADNIEGANQLGITSILVKDKTT 196 (206)
T ss_dssp HHHHHHHTCCGGGEEEEES-CHHHHHHHHTTTCEEEECCSTTH
T ss_pred HHHHHHcCCCHHHeEEeCC-CHHHHHHHHHcCCeEEEecCCch
Confidence 3344444333467999999 99999999999998877644444
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.024 Score=60.66 Aligned_cols=40 Identities=10% Similarity=0.053 Sum_probs=34.9
Q ss_pred ccchHHHHHHHHHcCCEEEEec---CCcHHHHHHHHHHcCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVS---EDELLAVTEVACELGNFR 743 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlT---GD~~~tA~~IA~~~GI~~ 743 (1108)
-++..++++.+++.|+++.++| |..........+++|+..
T Consensus 34 ~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 34 IAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp CTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 4678889999999999999999 999888888888888753
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.67 E-value=0.0089 Score=68.75 Aligned_cols=131 Identities=16% Similarity=0.153 Sum_probs=84.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCc--cccchhhhhhcCHHHHHHHhcccceecccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESND--IALEGEQFRELNSTERMAKLDSMTLMGSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~--~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~ 781 (1108)
.||+.++++.|+++|+++.++|+.....+..+-+..|+... -. .++.+++.... .+..+...-...-.|+-
T Consensus 217 ~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~--Fd~~~Ivs~ddv~~~-----~~~~~~~kp~~KP~P~~ 289 (384)
T 1qyi_A 217 VDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY--FEADFIATASDVLEA-----ENMYPQARPLGKPNPFS 289 (384)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG--SCGGGEECHHHHHHH-----HHHSTTSCCCCTTSTHH
T ss_pred CcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh--cCCCEEEeccccccc-----ccccccccCCCCCCHHH
Confidence 89999999999999999999999999999999999998652 22 55666544210 00000000001111111
Q ss_pred HHHHHHHHHhC-----------------CCEEEEEeCCCCCCHHHHhhCCcc-EecCCCcc-------HHHHhccchhhc
Q 043360 782 KLLLVQSVKEK-----------------GHVVAFFGGSSTRDTPALKEADVG-ITEENKCT-------EMARECSDIVIS 836 (1108)
Q Consensus 782 K~~iV~~lq~~-----------------g~~Va~iGD~G~ND~~aLk~AdVG-Iamg~~gt-------e~ak~aADivl~ 836 (1108)
....+++. ...++|+|| +.+|+.|-++|++. |++. .|. +.....+|+++.
T Consensus 290 ---~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGD-s~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~ 364 (384)
T 1qyi_A 290 ---YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGD-SLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVIN 364 (384)
T ss_dssp ---HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEES-SHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEES
T ss_pred ---HHHHHHHcCCccccccccccccCCCCcCeEEEcC-CHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEEC
Confidence 11222222 357999999 99999999999975 3333 221 222346899988
Q ss_pred ccccHHHHHH
Q 043360 837 AVGSLLPILK 846 (1108)
Q Consensus 837 ~f~~I~~li~ 846 (1108)
++..+..++.
T Consensus 365 sl~eL~~~l~ 374 (384)
T 1qyi_A 365 HLGELRGVLD 374 (384)
T ss_dssp SGGGHHHHHS
T ss_pred CHHHHHHHHH
Confidence 8888887763
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.0066 Score=65.90 Aligned_cols=54 Identities=20% Similarity=0.402 Sum_probs=46.7
Q ss_pred hHHHHHHHHHhC--CCEEEEEeCC---CCCCHHHHhhCC-ccEecCCCccHHHHhccchhhc
Q 043360 781 DKLLLVQSVKEK--GHVVAFFGGS---STRDTPALKEAD-VGITEENKCTEMARECSDIVIS 836 (1108)
Q Consensus 781 ~K~~iV~~lq~~--g~~Va~iGD~---G~ND~~aLk~Ad-VGIamg~~gte~ak~aADivl~ 836 (1108)
.|..-++.| .. .+.|+++||+ |.||.+||+.|+ +|++|| ++.+..|+.||++..
T Consensus 197 sKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~ 256 (262)
T 2fue_A 197 DKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFP 256 (262)
T ss_dssp STTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCT
T ss_pred CHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCC
Confidence 688888888 22 4689999995 699999999999 599998 899999999999875
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.53 E-value=0.016 Score=62.70 Aligned_cols=39 Identities=18% Similarity=0.185 Sum_probs=35.1
Q ss_pred cchHHHHHHHHHcCCEEEEec---CCcHHHHHHHHHHcCCCC
Q 043360 705 EEIKSTVEALRNAGVRIILVS---EDELLAVTEVACELGNFR 743 (1108)
Q Consensus 705 ~~v~~aI~~l~~aGI~v~mlT---GD~~~tA~~IA~~~GI~~ 743 (1108)
|+++++|++++++|++|+++| |..........+++|+..
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 789999999999999999999 888888888888899864
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.37 E-value=0.0065 Score=63.88 Aligned_cols=101 Identities=9% Similarity=-0.032 Sum_probs=66.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHH------cCCCCCCCCccccchhhhhhcCHHHHHHHhcccceeccc
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE------LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 777 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~------~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~ 777 (1108)
.|++.+.++.|++. +++.++|+.....+..+.+. .|+... -..++.+.+.. ...-
T Consensus 114 ~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~--fd~i~~~~~~~----------------~~KP 174 (229)
T 4dcc_A 114 PTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY--FEKTYLSYEMK----------------MAKP 174 (229)
T ss_dssp CHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH--CSEEEEHHHHT----------------CCTT
T ss_pred cHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh--CCEEEeecccC----------------CCCC
Confidence 68999999999998 99999999998888877643 444211 11122222110 1122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCcc
Q 043360 778 LADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCT 824 (1108)
Q Consensus 778 sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gt 824 (1108)
.|+--..+.+.+.-..+.++++|| +.||+.|.+.|+++.++...+.
T Consensus 175 ~~~~~~~~~~~~g~~~~~~~~vGD-~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 175 EPEIFKAVTEDAGIDPKETFFIDD-SEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEECS-CHHHHHHHHHTTCEEECCCTTC
T ss_pred CHHHHHHHHHHcCCCHHHeEEECC-CHHHHHHHHHcCCEEEEECCHH
Confidence 233333344444333467999999 9999999999999988774443
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.33 E-value=0.023 Score=58.91 Aligned_cols=115 Identities=17% Similarity=0.134 Sum_probs=73.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.++++.|+++|+++.++||.....+..+.. .. ...++.+.+. .+..|. ..
T Consensus 38 ~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~----~d~v~~~~~~------------------~~~KP~-p~ 91 (196)
T 2oda_A 38 TPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV----NDWMIAAPRP------------------TAGWPQ-PD 91 (196)
T ss_dssp CTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT----TTTCEECCCC------------------SSCTTS-TH
T ss_pred CcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc----CCEEEECCcC------------------CCCCCC-hH
Confidence 7999999999999999999999998877755443 11 1122222211 111221 12
Q ss_pred HHHHHHHhCC----CEEEEEeCCCCCCHHHHhhCCcc-EecCCCcc---------------------------HHHHhcc
Q 043360 784 LLVQSVKEKG----HVVAFFGGSSTRDTPALKEADVG-ITEENKCT---------------------------EMARECS 831 (1108)
Q Consensus 784 ~iV~~lq~~g----~~Va~iGD~G~ND~~aLk~AdVG-Iamg~~gt---------------------------e~ak~aA 831 (1108)
-+.+.+++.| +.+.|||| ..+|+.+-+.|++- |++. .|. +.....+
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGD-s~~Di~aA~~aG~~~i~v~-~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~ 169 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISG-DPRLLQSGLNAGLWTIGLA-SCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGV 169 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEES-CHHHHHHHHHHTCEEEEES-SSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCccEEEEeC-CHHHHHHHHHCCCEEEEEc-cCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCC
Confidence 2333444432 46899999 99999999999963 4333 121 0112357
Q ss_pred chhhcccccHHHHHH
Q 043360 832 DIVISAVGSLLPILK 846 (1108)
Q Consensus 832 Divl~~f~~I~~li~ 846 (1108)
|+++.++..|..++.
T Consensus 170 d~vi~~~~eL~~~l~ 184 (196)
T 2oda_A 170 HSVIDHLGELESCLA 184 (196)
T ss_dssp SEEESSGGGHHHHHH
T ss_pred CEEeCCHHHHHHHHH
Confidence 888888888887663
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=95.19 E-value=0.15 Score=51.39 Aligned_cols=49 Identities=12% Similarity=-0.002 Sum_probs=33.7
Q ss_pred ccccceEEEEEEECCcc--cCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHc
Q 043360 525 LVCNRVDVSKFCIGEKD--VNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSR 587 (1108)
Q Consensus 525 LT~n~m~v~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~ 587 (1108)
||+|+|+|.++...... ++ ..+++.+...+ +..+.||+.+|+++++++.
T Consensus 1 LT~G~p~V~~v~~~~~~~~~~-------~~~lL~laasl-------E~~SeHPlA~AIv~~a~~~ 51 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVATLP-------LRKVLAVVGTA-------EASSEHPLGVAVTKYCKEE 51 (165)
T ss_dssp CCCCCCCEEEEEECCCTTTSC-------HHHHHHHHHHH-------HTTSCSTTHHHHHHHHHHH
T ss_pred CCCceeEEEEEEeeCCcCCCC-------HHHHHHHHHHH-------HccCCChHHHHHHHHHHHh
Confidence 89999999998764311 11 12344444333 5678999999999999754
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=95.18 E-value=0.023 Score=61.40 Aligned_cols=40 Identities=10% Similarity=0.027 Sum_probs=35.4
Q ss_pred ccchHHHHHHHHHcCCEEEEec---CCcHHHHHHHHHHcCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVS---EDELLAVTEVACELGNFR 743 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlT---GD~~~tA~~IA~~~GI~~ 743 (1108)
-+++.++|+.|++.|+++.++| |..........+++|+..
T Consensus 35 ~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 35 LPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5788999999999999999999 888888888888888853
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.026 Score=60.43 Aligned_cols=114 Identities=12% Similarity=0.168 Sum_probs=75.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+... -..++.+++... ..-.|+-=.
T Consensus 118 ~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~--Fd~i~~~~~~~~----------------~KP~p~~~~ 177 (250)
T 4gib_A 118 LPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDK--FDFIADAGKCKN----------------NKPHPEIFL 177 (250)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGG--CSEECCGGGCCS----------------CTTSSHHHH
T ss_pred chhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccc--cceeecccccCC----------------CCCcHHHHH
Confidence 7899999999999999998877653 45667788898753 334444443221 112222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-cEecCCCccHHHHhccchhhcccccH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADV-GITEENKCTEMARECSDIVISAVGSL 841 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV-GIamg~~gte~ak~aADivl~~f~~I 841 (1108)
.+.+.+.-..+.++|||| ..+|+.|-++|++ .|+++ +..+. ..||+++.++..|
T Consensus 178 ~a~~~lg~~p~e~l~VGD-s~~Di~aA~~aG~~~i~v~-~~~~~--~~ad~vi~~l~eL 232 (250)
T 4gib_A 178 MSAKGLNVNPQNCIGIED-ASAGIDAINSANMFSVGVG-NYENL--KKANLVVDSTNQL 232 (250)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHTTCEEEEES-CTTTT--TTSSEEESSGGGC
T ss_pred HHHHHhCCChHHeEEECC-CHHHHHHHHHcCCEEEEEC-ChhHh--ccCCEEECChHhC
Confidence 333333333456999999 9999999999997 35554 22222 4589998877665
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=94.88 E-value=0.011 Score=63.23 Aligned_cols=52 Identities=21% Similarity=0.365 Sum_probs=42.9
Q ss_pred hHHHHHHHHHhC--CCEEEEEeCC---CCCCHHHHhhCCc-cEecCCCccHHHHhccchh
Q 043360 781 DKLLLVQSVKEK--GHVVAFFGGS---STRDTPALKEADV-GITEENKCTEMARECSDIV 834 (1108)
Q Consensus 781 ~K~~iV~~lq~~--g~~Va~iGD~---G~ND~~aLk~AdV-GIamg~~gte~ak~aADiv 834 (1108)
+|..-++.| .. .+.|+++||. |.||.+||+.|+. |++|| ++.+..|+.||+|
T Consensus 188 ~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred chHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 677777777 22 4689999996 7899999999987 99999 8999999999987
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.85 E-value=0.02 Score=59.86 Aligned_cols=116 Identities=12% Similarity=0.071 Sum_probs=68.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|+++|+++.++|+... .+..+.+.+|+... -+.++.+.+. ....|.- .
T Consensus 97 ~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~--f~~~~~~~~~------------------~~~Kp~~-~ 154 (220)
T 2zg6_A 97 YDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKY--FDALALSYEI------------------KAVKPNP-K 154 (220)
T ss_dssp CTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGG--CSEEC-----------------------------C-C
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhH--eeEEEecccc------------------CCCCCCH-H
Confidence 89999999999999999999999876 47788888998642 1222222211 0111211 1
Q ss_pred HHHHHHHhCCCEEEEEeCCCCC-CHHHHhhCCccEe-cCCCccHHHHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTR-DTPALKEADVGIT-EENKCTEMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~N-D~~aLk~AdVGIa-mg~~gte~ak~aADivl~~f~~I~~li 845 (1108)
-+-+.+++.|..-+|+|| +.+ |+.+-+.|++... +...+.. . +. |.++.++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~vgD-~~~~Di~~a~~aG~~~i~v~~~~~~-~-~~-~~~i~~l~el~~~l 214 (220)
T 2zg6_A 155 IFGFALAKVGYPAVHVGD-IYELDYIGAKRSYVDPILLDRYDFY-P-DV-RDRVKNLREALQKI 214 (220)
T ss_dssp HHHHHHHHHCSSEEEEES-SCCCCCCCSSSCSEEEEEBCTTSCC-T-TC-CSCBSSHHHHHHHH
T ss_pred HHHHHHHHcCCCeEEEcC-CchHhHHHHHHCCCeEEEECCCCCC-C-Cc-ceEECCHHHHHHHH
Confidence 122233333322299999 998 9999999998755 3311211 1 11 44555666666554
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=94.37 E-value=0.036 Score=60.02 Aligned_cols=81 Identities=15% Similarity=0.106 Sum_probs=61.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcH----HHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDEL----LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~----~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP 779 (1108)
.|++.+.++.|+++|+++.++||... +.+..-.+++||....... ++-|...
T Consensus 103 ~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~------------------------Lilr~~~ 158 (260)
T 3pct_A 103 IPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKT------------------------LLLKKDK 158 (260)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTT------------------------EEEESSC
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccce------------------------eEecCCC
Confidence 79999999999999999999999865 4667777888997521101 3333334
Q ss_pred hhHHHHHHHHHhC-CCEEEEEeCCCCCCHHH
Q 043360 780 DDKLLLVQSVKEK-GHVVAFFGGSSTRDTPA 809 (1108)
Q Consensus 780 ~~K~~iV~~lq~~-g~~Va~iGD~G~ND~~a 809 (1108)
.+|....+.+++. -.+|+++|| -.+|.++
T Consensus 159 ~~K~~~r~~L~~~gy~iv~~iGD-~~~Dl~~ 188 (260)
T 3pct_A 159 SNKSVRFKQVEDMGYDIVLFVGD-NLNDFGD 188 (260)
T ss_dssp SSSHHHHHHHHTTTCEEEEEEES-SGGGGCG
T ss_pred CChHHHHHHHHhcCCCEEEEECC-ChHHcCc
Confidence 6788888888875 457999999 8888875
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.24 E-value=0.05 Score=57.01 Aligned_cols=59 Identities=10% Similarity=0.081 Sum_probs=38.7
Q ss_pred HHHHHHHHHhC----CCEEEEEeCCC-CCCHHHHhhCCccEe---cCCCccHHHH---hccchhhcccccH
Q 043360 782 KLLLVQSVKEK----GHVVAFFGGSS-TRDTPALKEADVGIT---EENKCTEMAR---ECSDIVISAVGSL 841 (1108)
Q Consensus 782 K~~iV~~lq~~----g~~Va~iGD~G-~ND~~aLk~AdVGIa---mg~~gte~ak---~aADivl~~f~~I 841 (1108)
|...++.+.++ .+.++++|| + .||..|++.|+++++ +|....+..+ ..+|+++.++..+
T Consensus 178 k~~~~~~~~~~lgi~~~~~i~iGD-~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el 247 (250)
T 2c4n_A 178 SPWIIRAALNKMQAHSEETVIVGD-NLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEES-CTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred CHHHHHHHHHHcCCCcceEEEECC-CchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence 44445444333 357999999 9 799999999998854 5632223333 3688887755543
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.85 E-value=0.038 Score=58.21 Aligned_cols=113 Identities=13% Similarity=0.169 Sum_probs=71.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.| ++.++|+-....+..+.+.+|+... +++ . +... ..|.
T Consensus 98 ~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~------f~~-----------------~-~~~~---~~K~ 149 (231)
T 2p11_A 98 YPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE------VEG-----------------R-VLIY---IHKE 149 (231)
T ss_dssp CTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH------TTT-----------------C-EEEE---SSGG
T ss_pred CccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh------cCe-----------------e-EEec---CChH
Confidence 899999999999999 9999999998889999998887421 000 0 1111 1222
Q ss_pred HHHHHHHh--CCCEEEEEeCCCCC---CHHHHhhCCcc---EecCCC--ccHHHHh--ccchhhcccccHHHHH
Q 043360 784 LLVQSVKE--KGHVVAFFGGSSTR---DTPALKEADVG---ITEENK--CTEMARE--CSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~--~g~~Va~iGD~G~N---D~~aLk~AdVG---Iamg~~--gte~ak~--aADivl~~f~~I~~li 845 (1108)
.+.+.+.+ ..+.++|+|| +.| |..+-+.|++- +.-|.. ..+..++ .+|+++.++..+..++
T Consensus 150 ~~~~~~~~~~~~~~~~~vgD-s~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l 222 (231)
T 2p11_A 150 LMLDQVMECYPARHYVMVDD-KLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMD 222 (231)
T ss_dssp GCHHHHHHHSCCSEEEEECS-CHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGCG
T ss_pred HHHHHHHhcCCCceEEEEcC-ccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHHH
Confidence 23333332 3468999999 999 55555667643 322311 1122233 2888888777766554
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=93.15 E-value=0.05 Score=58.99 Aligned_cols=81 Identities=11% Similarity=0.078 Sum_probs=60.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcH----HHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDEL----LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~----~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP 779 (1108)
.|++.+.++.|+++|+++.++||... +.+..-.+++||..-+... ++-|..-
T Consensus 103 ~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~------------------------Lilr~~~ 158 (262)
T 3ocu_A 103 VPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESA------------------------FYLKKDK 158 (262)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGG------------------------EEEESSC
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccc------------------------eeccCCC
Confidence 79999999999999999999999865 4666667788997420001 3334333
Q ss_pred hhHHHHHHHHHhCC-CEEEEEeCCCCCCHHH
Q 043360 780 DDKLLLVQSVKEKG-HVVAFFGGSSTRDTPA 809 (1108)
Q Consensus 780 ~~K~~iV~~lq~~g-~~Va~iGD~G~ND~~a 809 (1108)
..|....+.+.+.| .+|+++|| -.+|.++
T Consensus 159 ~~K~~~r~~l~~~Gy~iv~~vGD-~~~Dl~~ 188 (262)
T 3ocu_A 159 SAKAARFAEIEKQGYEIVLYVGD-NLDDFGN 188 (262)
T ss_dssp SCCHHHHHHHHHTTEEEEEEEES-SGGGGCS
T ss_pred CChHHHHHHHHhcCCCEEEEECC-ChHHhcc
Confidence 56777777887774 57999999 8888865
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=92.43 E-value=0.11 Score=58.21 Aligned_cols=117 Identities=11% Similarity=0.051 Sum_probs=72.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHc----CCCCCCCCccccchhhhh--------hcCH-HHHHH----
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL----GNFRPESNDIALEGEQFR--------ELNS-TERMA---- 766 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~----GI~~~~~~~~vi~G~~l~--------~l~~-~~~~~---- 766 (1108)
.|++.+.++.|+++|++|+++||-....++.+|..+ ||..+ .|+ |..+. .... .+..+
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e----~Vi-G~~~~~~~~~~~~~~~~~~~~~dg~y~ 219 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPE----NVI-GVTTLLKNRKTGELTTARKQIAEGKYD 219 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGG----GEE-EECEEEECTTTCCEECHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHH----HeE-eeeeeeecccccccccccccccccccc
Confidence 899999999999999999999999999999999985 56542 111 11100 0000 00000
Q ss_pred --Hhcccceec-----ccCHhhHHHHHHHHHhC-CCEEEEEeCCC-CCCHHHHhh--CCccEecCCCccHH
Q 043360 767 --KLDSMTLMG-----SCLADDKLLLVQSVKEK-GHVVAFFGGSS-TRDTPALKE--ADVGITEENKCTEM 826 (1108)
Q Consensus 767 --~~~~~~V~a-----r~sP~~K~~iV~~lq~~-g~~Va~iGD~G-~ND~~aLk~--AdVGIamg~~gte~ 826 (1108)
...+..+-. .+--+.|..-++...+. ..-+++.|| + ..|.+||+. ++.|+++-++-.+.
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gn-s~dgD~~ML~~~~~~~~~~L~in~~~~ 289 (327)
T 4as2_A 220 PKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGD-TPDSDGYMLFNGTAENGVHLWVNRKAK 289 (327)
T ss_dssp GGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEES-CHHHHHHHHHHTSCTTCEEEEECCCHH
T ss_pred ccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecC-CCCCCHHHHhccccCCCeEEEEecCCc
Confidence 000111111 12235687777766544 356889999 8 469999965 66677655444443
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=92.29 E-value=0.35 Score=51.17 Aligned_cols=40 Identities=15% Similarity=0.100 Sum_probs=30.6
Q ss_pred ccchHHHHHHHHHcCCEEEEec---CCcHHHHHHHHHHcCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVS---EDELLAVTEVACELGNFR 743 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlT---GD~~~tA~~IA~~~GI~~ 743 (1108)
-+++.++++.+++.|+++.++| |.........-++.|+..
T Consensus 25 ~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 25 VPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp CTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 3567889999999999999999 555555555556677754
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=91.92 E-value=0.089 Score=55.99 Aligned_cols=92 Identities=11% Similarity=0.034 Sum_probs=61.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.+.++.|++.|+++.++|.... +..+-+.+|+... ...++.+.+... ..-.|+-=.
T Consensus 97 ~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~--fd~i~~~~~~~~----------------~KP~p~~~~ 156 (243)
T 4g9b_A 97 LPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREF--FTFCADASQLKN----------------SKPDPEIFL 156 (243)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGG--CSEECCGGGCSS----------------CTTSTHHHH
T ss_pred cccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccc--cccccccccccC----------------CCCcHHHHH
Confidence 79999999999999999999997643 4566778888653 334444443321 111222212
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
...+.+.-..+.++|||| ..+|+.|-++|++-
T Consensus 157 ~a~~~lg~~p~e~l~VgD-s~~di~aA~~aG~~ 188 (243)
T 4g9b_A 157 AACAGLGVPPQACIGIED-AQAGIDAINASGMR 188 (243)
T ss_dssp HHHHHHTSCGGGEEEEES-SHHHHHHHHHHTCE
T ss_pred HHHHHcCCChHHEEEEcC-CHHHHHHHHHcCCE
Confidence 223333323457999999 99999999999863
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=91.53 E-value=0.042 Score=55.73 Aligned_cols=95 Identities=6% Similarity=0.102 Sum_probs=60.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCC---------------cHHHHHHHHHHcCCCCCCCCccccch----hhhhhcCHHHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSED---------------ELLAVTEVACELGNFRPESNDIALEG----EQFRELNSTER 764 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD---------------~~~tA~~IA~~~GI~~~~~~~~vi~G----~~l~~l~~~~~ 764 (1108)
.|++.++++.|++.|+++.++|+- ....+..+.+..|+.- ..+++.+ .+..
T Consensus 44 ~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d~v~~s~~~~~~~~~------- 113 (176)
T 2fpr_A 44 EPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF---DEVLICPHLPADECD------- 113 (176)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE---EEEEEECCCGGGCCS-------
T ss_pred CccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe---eEEEEcCCCCccccc-------
Confidence 899999999999999999999997 5677788888888851 2222221 1110
Q ss_pred HHHhcccceecccCHhh--HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-EecC
Q 043360 765 MAKLDSMTLMGSCLADD--KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE 820 (1108)
Q Consensus 765 ~~~~~~~~V~ar~sP~~--K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG-Iamg 820 (1108)
...|.- =..+.+.+.-....++|||| ..+|+.+-+.|++- |.+.
T Consensus 114 -----------~~KP~p~~~~~~~~~~gi~~~~~l~VGD-~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 114 -----------CRKPKVKLVERYLAEQAMDRANSYVIGD-RATDIQLAENMGINGLRYD 160 (176)
T ss_dssp -----------SSTTSCGGGGGGC----CCGGGCEEEES-SHHHHHHHHHHTSEEEECB
T ss_pred -----------ccCCCHHHHHHHHHHcCCCHHHEEEEcC-CHHHHHHHHHcCCeEEEEc
Confidence 011110 00111122212345889999 99999999999886 4344
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=90.79 E-value=0.14 Score=56.46 Aligned_cols=91 Identities=12% Similarity=-0.094 Sum_probs=62.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHH---HHHHHH--------cCCCCCCCCccccchhhhhhcCHHHHHHHhcccc
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAV---TEVACE--------LGNFRPESNDIALEGEQFRELNSTERMAKLDSMT 772 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA---~~IA~~--------~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~ 772 (1108)
.|++.++++.|+++|+++.++||-....+ ...-+. .|+.- ..++..+..
T Consensus 190 ~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~----------------- 249 (301)
T 1ltq_A 190 NPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL---VMQCQREQG----------------- 249 (301)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC---SEEEECCTT-----------------
T ss_pred ChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc---hheeeccCC-----------------
Confidence 79999999999999999999999875433 333334 67721 222221211
Q ss_pred eecccCHhhHHHHHHHHHhCC-CEEEEEeCCCCCCHHHHhhCCcc
Q 043360 773 LMGSCLADDKLLLVQSVKEKG-HVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 773 V~ar~sP~~K~~iV~~lq~~g-~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
-.+-.|+-|..+.+.+.... ..++|+|| ..+|+.|-++|++-
T Consensus 250 -~~kp~p~~~~~~~~~~~~~~~~~~~~vgD-~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 250 -DTRKDDVVKEEIFWKHIAPHFDVKLAIDD-RTQVVEMWRRIGVE 292 (301)
T ss_dssp -CCSCHHHHHHHHHHHHTTTTCEEEEEEEC-CHHHHHHHHHTTCC
T ss_pred -CCcHHHHHHHHHHHHHhccccceEEEeCC-cHHHHHHHHHcCCe
Confidence 11334666777777764333 34689999 99999999999875
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=90.05 E-value=0.39 Score=51.74 Aligned_cols=116 Identities=15% Similarity=0.146 Sum_probs=70.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHc---CCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL---GNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAD 780 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~---GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~ 780 (1108)
.|++.++++.|+++|+++.++|.-....+..+-+.+ |+... -..++.+ +. -..-.|+
T Consensus 132 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~--fd~i~~~-~~-----------------~~KP~p~ 191 (261)
T 1yns_A 132 FADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL--VDGHFDT-KI-----------------GHKVESE 191 (261)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG--CSEEECG-GG-----------------CCTTCHH
T ss_pred CcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh--ccEEEec-CC-----------------CCCCCHH
Confidence 899999999999999999999999888887776644 45431 1112222 11 1111122
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccE-ecCCCcc---HHHHhccchhhccccc
Q 043360 781 DKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGI-TEENKCT---EMARECSDIVISAVGS 840 (1108)
Q Consensus 781 ~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGI-amg~~gt---e~ak~aADivl~~f~~ 840 (1108)
-=..+.+.+.-..+.++|||| ..+|+.+-++|++-. .+...+. +.....+|.++.++..
T Consensus 192 ~~~~~~~~lg~~p~~~l~VgD-s~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~e 254 (261)
T 1yns_A 192 SYRKIADSIGCSTNNILFLTD-VTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSE 254 (261)
T ss_dssp HHHHHHHHHTSCGGGEEEEES-CHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGG
T ss_pred HHHHHHHHhCcCcccEEEEcC-CHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHH
Confidence 112233333323457999999 899999999999753 3322221 1122346777665543
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=89.94 E-value=0.21 Score=54.04 Aligned_cols=39 Identities=18% Similarity=0.111 Sum_probs=32.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCc---HHHHHHHHHHcCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDE---LLAVTEVACELGNF 742 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~---~~tA~~IA~~~GI~ 742 (1108)
-|++.++|+.|++.|+++.++||.. .......-+.+|+.
T Consensus 103 ~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 103 LPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 7999999999999999999999987 34444555777886
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=84.70 E-value=0.24 Score=51.80 Aligned_cols=87 Identities=14% Similarity=0.138 Sum_probs=53.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHH----cCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE----LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~----~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP 779 (1108)
.+++.+.++.|+++|+++.++|+-....+..+.+. .+... .|... ..+.+..|
T Consensus 90 ~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~---------------~~~~~~KP 146 (211)
T 2b82_A 90 KEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP---------------VIFAGDKP 146 (211)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC---------------CEECCCCT
T ss_pred cHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch---------------hhhcCCCC
Confidence 67899999999999999999999864433222222 22210 00000 01112222
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 780 DDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 780 ~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
.- ..+.+.+++.|- ++|+|| ..+|+.+-+.|++-
T Consensus 147 ~p-~~~~~~~~~~g~-~l~VGD-s~~Di~aA~~aG~~ 180 (211)
T 2b82_A 147 GQ-NTKSQWLQDKNI-RIFYGD-SDNDITAARDVGAR 180 (211)
T ss_dssp TC-CCSHHHHHHTTE-EEEEES-SHHHHHHHHHTTCE
T ss_pred CH-HHHHHHHHHCCC-EEEEEC-CHHHHHHHHHCCCe
Confidence 11 122334455554 999999 99999999999875
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=83.66 E-value=0.79 Score=50.38 Aligned_cols=52 Identities=12% Similarity=0.023 Sum_probs=37.1
Q ss_pred CEEEEEeCCCC-CCHHHHhhCCccEec---CCCccHHHH---------hccchhhcccccHHHHHH
Q 043360 794 HVVAFFGGSST-RDTPALKEADVGITE---ENKCTEMAR---------ECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 794 ~~Va~iGD~G~-ND~~aLk~AdVGIam---g~~gte~ak---------~aADivl~~f~~I~~li~ 846 (1108)
+.++|+|| +. ||..|.+.|++...+ |....+..+ ..+|+++.++..+..+++
T Consensus 233 ~e~l~vGD-~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 233 ARTLMVGD-RLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp GGEEEEES-CTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred HHEEEECC-CchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence 56999999 96 999999999998764 322212221 357888888888877753
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=81.53 E-value=0.59 Score=54.92 Aligned_cols=95 Identities=12% Similarity=0.068 Sum_probs=58.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCC------cHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceeccc
Q 043360 704 REEIKSTVEALRNAGVRIILVSED------ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 777 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD------~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~ 777 (1108)
.|++.++++.|+++|+++.++|+- ......... .|+... -+.++.+++... ..-
T Consensus 102 ~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~--fd~i~~~~~~~~----------------~KP 161 (555)
T 3i28_A 102 NRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH--FDFLIESCQVGM----------------VKP 161 (555)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT--SSEEEEHHHHTC----------------CTT
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh--eeEEEeccccCC----------------CCC
Confidence 799999999999999999999985 222221111 133221 233444444321 111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEec
Q 043360 778 LADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITE 819 (1108)
Q Consensus 778 sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIam 819 (1108)
.|+-=..+.+.+.-..+.++|+|| ..||+.+.+.|++....
T Consensus 162 ~p~~~~~~~~~lg~~p~~~~~v~D-~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 162 EPQIYKFLLDTLKASPSEVVFLDD-IGANLKPARDLGMVTIL 202 (555)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEES-CHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHcCCChhHEEEECC-cHHHHHHHHHcCCEEEE
Confidence 222222333333323456889999 99999999999998654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1108 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-15 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 6e-14 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-09 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 4e-12 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 8e-10 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 8e-09 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-08 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-05 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-04 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 73.3 bits (179), Expect = 2e-15
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 703 LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG--NFRPESNDIALEGEQFRELN 760
R+E+ +++ R+AG+R+I+++ D + +G E D A G +F +L
Sbjct: 21 PRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLP 80
Query: 761 STERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEE 820
E+ K +V+ ++ + A G D PALK+A++GI
Sbjct: 81 LAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMT-GDGVNDAPALKKAEIGIA-M 138
Query: 821 NKCTEMARECSDIVI 835
T +A+ S++V+
Sbjct: 139 GSGTAVAKTASEMVL 153
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 73.2 bits (179), Expect = 6e-14
Identities = 28/247 (11%), Positives = 77/247 (31%), Gaps = 34/247 (13%)
Query: 846 KLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIM 905
LGR Y N+++F + ++ ++ +T + + +QL+WV + L +
Sbjct: 226 TLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATAL 285
Query: 906 RMEFKDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGMNRDIR- 964
D + + PP + L+ ++ + + +
Sbjct: 286 GFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTY 345
Query: 965 -----------------------------KAMTFNSFTLCQVFNQFDAMRLLKKAVLPVV 995
M + ++ N ++++ +
Sbjct: 346 HQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNAL-NSLSENQSLMRMP 404
Query: 996 LKK---FNVLMVFLIVIAAQVLVVEFATSLAGYQRLNGMQWGICFILAVLPWGIHRAVNF 1052
+ + + +L V+ + + L+ QW + +++ G+ + F
Sbjct: 405 PWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKF 464
Query: 1053 IADSFLD 1059
IA ++L+
Sbjct: 465 IARNYLE 471
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 59.3 bits (143), Expect = 1e-09
Identities = 46/302 (15%), Positives = 99/302 (32%), Gaps = 42/302 (13%)
Query: 198 GPEKVASAFGSHLEHGIQGDQLPQPQI---WNTIKPNHAREFFLFLLKASNNFNILLLLV 254
E+ + FG G+ DQ+ + N + + + +++ + + +LL+
Sbjct: 8 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 67
Query: 255 AAALSFVTGTIEQGP--KDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKL 312
AA +SFV E+G + + IL+ + +E + E
Sbjct: 68 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAAT 127
Query: 313 EVKVVRSGREQLIAVSNLLKGDVVRLAK-GDRVPGDGLVVNSDGLMLDDVLNSEIDPDRN 371
E +L + G+++ ++ +++ ++
Sbjct: 128 EQDKT---------------PLQQKLDEFGEQLSKVISLICVAVWLINIGHFND------ 166
Query: 372 PFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSNLSLAVTVLIALVALIRLLWRKHSGDD 431
G + G I+V +A+ L +T +AL R+ K +
Sbjct: 167 --PVHGGSWIRGAIYYFKIAVALAVAAIPEG---LPAVITTCLALGT-RRMA--KKNAIV 218
Query: 432 HELPELKGNVSVGTV-MKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFW 490
LP ++ MK F R+L+ S V + + + G+P + W
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLI------SSNVGEVVCIFLTAALGLPEALIPVQLLW 272
Query: 491 ND 492
+
Sbjct: 273 VN 274
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 67.1 bits (163), Expect = 4e-12
Identities = 36/366 (9%), Positives = 92/366 (25%), Gaps = 45/366 (12%)
Query: 505 LSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAV-LQALERGIG 563
L +G+ S I + + F +K +N + +N + + I
Sbjct: 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIF-QKDKILNKLKSLGLNSNWDMLFIVFSIH 88
Query: 564 ASVLVPEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGD 623
++ ++S ++ + + V
Sbjct: 89 LIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNV-----KVG 143
Query: 624 EDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFAC- 682
++ I + + + + + + +
Sbjct: 144 KNNIYAALEEFATTELHVSDA--------------TLFSLKGALWTLAQEVYQEWYLGSK 189
Query: 683 ------GQTEVSEIKENGLHLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVA 736
+ + K ++ + +E+K + L+ AG + + +
Sbjct: 190 LYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPF 249
Query: 737 CELGNFRPESNDIALEGEQFRELNSTERMAK---------LDSMTLMGSCLADDKLLLVQ 787
LG D E + A+ + + + + Q
Sbjct: 250 ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQ 309
Query: 788 SVKEKGHVVAFFGGSSTRDTPALKEADV-------GITEENKCTEMARECSDIVISAVGS 840
V G S D + ++ G+ ++ E+ +D VI+ +G
Sbjct: 310 DNIVNKDDVFIV-GDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE 368
Query: 841 LLPILK 846
L +L
Sbjct: 369 LRGVLD 374
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 55.9 bits (134), Expect = 8e-10
Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 32/133 (24%)
Query: 703 LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNST 762
L+E K V+ L+ G+++ +++ D ++
Sbjct: 22 LKESAKPAVQELKRMGIKVGMITGDN-----------------------------WRSAE 52
Query: 763 ERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENK 822
+L+ ++ L K V+ ++ VVAF G D PAL +AD+GI +
Sbjct: 53 AISRELNLDLVIAEVLPHQKSEEVKKLQ-AKEVVAFVG-DGINDAPALAQADLGIAVGS- 109
Query: 823 CTEMARECSDIVI 835
+++A E DIV+
Sbjct: 110 GSDVAVESGDIVL 122
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 52.4 bits (125), Expect = 8e-09
Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 21/112 (18%)
Query: 314 VKVVRSGRE--QLIAVSNLLKGDVVRLAKGDRVPGDGLVVNSDGLML------------- 358
KV R+ R+ Q I +++ GD+V +A GD+VP D +++ L
Sbjct: 3 GKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVS 62
Query: 359 ------DDVLNSEIDPDRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRS 404
++ D+ LFSG+ + G ++ + G + G++
Sbjct: 63 VIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQ 114
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 54.5 bits (130), Expect = 1e-08
Identities = 19/137 (13%), Positives = 38/137 (27%), Gaps = 15/137 (10%)
Query: 580 LVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTI 639
L+ + +V + + +S NK + + + + G I
Sbjct: 72 LLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQS--HVLVMKGAPERI 129
Query: 640 LNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFAC-------------GQTE 686
L+ CS + K + FQ ++ G R + F T+
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTD 189
Query: 687 VSEIKENGLHLLALAGL 703
L + L +
Sbjct: 190 ELNFPTEKLCFVGLMSM 206
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 45.0 bits (105), Expect = 2e-05
Identities = 16/156 (10%), Positives = 42/156 (26%), Gaps = 7/156 (4%)
Query: 703 LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNST 762
+RE + V + + ++S V + + D + +
Sbjct: 76 IREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK-----DRIYCNHASFDNDYI 130
Query: 763 ERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENK 822
+ K ++ + E + G S D A K +D+ +
Sbjct: 131 HIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIG-DSVTDVEAAKLSDLCFARDYL 189
Query: 823 CTEMARECSD-IVISAVGSLLPILKLGRCAYCNIQK 857
E + + + + ++ + +Q
Sbjct: 190 LNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (95), Expect = 3e-04
Identities = 25/141 (17%), Positives = 43/141 (30%), Gaps = 8/141 (5%)
Query: 703 LREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNST 762
L I+ V L+ V++ L+S V VA +L L+ E
Sbjct: 83 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGF 142
Query: 763 ERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGI-TEEN 821
+ S + L++ ++ G D A AD I N
Sbjct: 143 DET-----QPTAESGGKGKVIKLLKEKFHFKKIIMI--GDGATDMEACPPADAFIGFGGN 195
Query: 822 KCTEMARECSDIVISAVGSLL 842
+ ++ + I+ LL
Sbjct: 196 VIRQQVKDNAKWYITDFVELL 216
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1108 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.94 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.92 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.92 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.87 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.87 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.02 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.85 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.84 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.76 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.73 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.71 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.69 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.65 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.64 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.51 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.45 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.41 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.33 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.31 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.17 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.11 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.62 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.48 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.24 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.12 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.0 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.83 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.82 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.45 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.09 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 95.99 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.81 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 95.78 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.32 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.04 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 94.68 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.52 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 93.66 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 93.43 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 93.17 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 92.47 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 92.0 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 91.92 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 91.6 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 91.45 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 90.55 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 89.72 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 89.52 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 89.18 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 87.62 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 86.94 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 84.72 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 83.1 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 82.5 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=4e-43 Score=416.97 Aligned_cols=429 Identities=15% Similarity=0.197 Sum_probs=342.3
Q ss_pred hhCCHHHHHHHhCCCCCCCCChhhhhchhhc---CCCCCCCCchHHHHHHHHhhhhHHHHHHHHHHHhhccccccCCC--
Q 043360 195 EIGGPEKVASAFGSHLEHGIQGDQLPQPQIW---NTIKPNHAREFFLFLLKASNNFNILLLLVAAALSFVTGTIEQGP-- 269 (1108)
Q Consensus 195 ~~gg~~~l~~~L~t~~~~GLs~~e~~~R~~~---N~~~~~~~~s~~~~l~~~~~~~~~i~lli~ails~~~~~~~~~~-- 269 (1108)
|-.++|++++.|+||+++|||++|+++|+++ |++++++++++|+.+++||+++++++|+++++++++.+....+.
T Consensus 5 h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~ 84 (472)
T d1wpga4 5 HSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEET 84 (472)
T ss_dssp GGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTST
T ss_pred hhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccccc
Confidence 3458999999999999999999999999999 99999999999999999999999999999999999998765443
Q ss_pred CCCcchhHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhhcCcEEEEEECCEEEEEEccccccCcEEEEcCCCccCcceE
Q 043360 270 KDGWHDGAAILIAVFVLLTFPAVTNFRRARKLEKKQWEEKNKLEVKVVRSGREQLIAVSNLLKGDVVRLAKGDRVPGDGL 349 (1108)
Q Consensus 270 ~~~~~~~~~il~~vl~v~~v~~~~~~~~~~~~~~l~~~~~~~~~v~ViRdG~~~~I~~~dLvvGDIV~l~~Gd~IPaDgi 349 (1108)
...|+|++.|+++++++..++.++|++.++..++++ ...+.. ..||++|+|.+
T Consensus 85 ~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~--~~~~~~-------------------------~~~~~~P~d~~ 137 (472)
T d1wpga4 85 ITAFVEPFVILLILIANAIVGVWQERNAENAIEALK--EYEPAA-------------------------TEQDKTPLQQK 137 (472)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHG--GGSCCC-------------------------CCCCCCHHHHH
T ss_pred chhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHh--hhcccc-------------------------ccccCchHHHH
Confidence 237999999999999999999999999999999988 433322 35888999876
Q ss_pred EEecCceeeeecccCCCCCCCCCeeeecceEeeceEEEEEEEeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 043360 350 VVNSDGLMLDDVLNSEIDPDRNPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSNLSLAVTVLIALVALIRLLWRKHSG 429 (1108)
Q Consensus 350 ll~g~~l~VdeSLTGES~p~~~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~~~~~~~~l~~i~l~~~~~~~~~~~ 429 (1108)
+.+. |+... ....+++...... ..+...
T Consensus 138 l~~~---------------------------------------------g~~i~----~~~~~~~~~~~~~--~~~~~~- 165 (472)
T d1wpga4 138 LDEF---------------------------------------------GEQLS----KVISLICVAVWLI--NIGHFN- 165 (472)
T ss_dssp HHHH---------------------------------------------HHHHH----HHHHHHHHHHHHH--CCTTSS-
T ss_pred HHHH---------------------------------------------HHHHH----HHHHHHHHHHHHH--HHHHHH-
Confidence 5331 11111 1111111111111 011110
Q ss_pred CCCCCccccccccccchhhhhhhhccCcccHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHhhhhhccccccCCCchhh
Q 043360 430 DDHELPELKGNVSVGTVMKIFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWNDKLLINHHAKPQNLSAGA 509 (1108)
Q Consensus 430 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~Lpl~vti~l~~~~~~m~~~~~ilvr~~~~~E 509 (1108)
..-.... ..+.+.+.+..+++++++++|||||+++|++++++++|| +|+|++||++++||
T Consensus 166 ~~~~~~~-------------------~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rm-ak~~~lVr~L~avE 225 (472)
T d1wpga4 166 DPVHGGS-------------------WIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM-AKKNAIVRSLPSVE 225 (472)
T ss_dssp SCCSSSC-------------------SSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH-HTTTEEESCTTHHH
T ss_pred HHHhhhh-------------------hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH-HhccchhhhHHHHH
Confidence 0000111 123566788999999999999999999999999999999 99999999999988
Q ss_pred cccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhcccccccccCCChhHHHHHHHHHHcCC
Q 043360 510 TMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISLWPTTDWLVSWAKSRSL 589 (1108)
Q Consensus 510 ~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~e~ALl~~a~~~g~ 589 (1108)
++|+..++|+|
T Consensus 226 ~~g~~~~~~~~--------------------------------------------------------------------- 236 (472)
T d1wpga4 226 TLGRAIYNNMK--------------------------------------------------------------------- 236 (472)
T ss_dssp HHTHHHHHHHH---------------------------------------------------------------------
T ss_pred HHHHHHHHHhH---------------------------------------------------------------------
Confidence 76655554444
Q ss_pred ChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHHHHHHHH
Q 043360 590 NVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKD 669 (1108)
Q Consensus 590 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~~~~i~~ 669 (1108)
T Consensus 237 -------------------------------------------------------------------------------- 236 (472)
T d1wpga4 237 -------------------------------------------------------------------------------- 236 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhCCCeEEEEEEecCcchhhhccCceeeEEEecccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCcc
Q 043360 670 MEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI 749 (1108)
Q Consensus 670 ~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~ir~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~ 749 (1108)
T Consensus 237 -------------------------------------------------------------------------------- 236 (472)
T d1wpga4 237 -------------------------------------------------------------------------------- 236 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHh
Q 043360 750 ALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARE 829 (1108)
Q Consensus 750 vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~ 829 (1108)
T Consensus 237 -------------------------------------------------------------------------------- 236 (472)
T d1wpga4 237 -------------------------------------------------------------------------------- 236 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchhhcccccHHHHHHhhhhhhhhhhhhhhhHhhcchhhHHHHHHHHHhcCCCchhHHHHHHHHHHHhHHHHHhhhccc
Q 043360 830 CSDIVISAVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYSIMYMLGGLIMRMEF 909 (1108)
Q Consensus 830 aADivl~~f~~I~~li~~GR~~~~~i~k~i~~~l~~ni~~i~~~~~~~~~~~~~pl~~~qll~~nli~~~l~~l~la~e~ 909 (1108)
|+++|+++.|+..++..+++.++..+.|++++|+||+|+++|.+|+++|++||
T Consensus 237 ---------------------------k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep 289 (472)
T d1wpga4 237 ---------------------------QFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNP 289 (472)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCC
T ss_pred ---------------------------HhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCC
Confidence 44455555555566667777788889999999999999999999999999999
Q ss_pred CCCCCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC------------------------------
Q 043360 910 KDQEPVTNPPARRTKSLLDKVMWKHTAVQVLCQVGVFLIFQFAGQVIPGM------------------------------ 959 (1108)
Q Consensus 910 ~~~~l~~~~P~~~~~~lis~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~~------------------------------ 959 (1108)
|++++|++||++++++++++.+++.++.++++..+..+.++++...+...
T Consensus 290 ~d~~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (472)
T d1wpga4 290 PDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIF 369 (472)
T ss_dssp CCSGGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGG
T ss_pred CchhhhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhh
Confidence 99999999999999999999999999999999988776665543322110
Q ss_pred CccccchhhhHHHHHHHHHHHhhhhhcccccccccccchhHHHHHHHHHHHHHHHHHH--HhHhhhccccCChhHHHHHH
Q 043360 960 NRDIRKAMTFNSFTLCQVFNQFDAMRLLKKAVLPVVLKKFNVLMVFLIVIAAQVLVVE--FATSLAGYQRLNGMQWGICF 1037 (1108)
Q Consensus 960 ~~~~~~T~~F~~~v~~q~~~~~~~r~~~~~~~f~~~~~n~~~~~~i~~~~~~~~~~v~--~~~~~f~~~~l~~~~wl~~i 1037 (1108)
...+.+|++|++++++|+++.+++|+.++..+.+++++|+++++++++++++|+++++ +++.+|++.||++.+|++++
T Consensus 370 ~~~~a~T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l 449 (472)
T d1wpga4 370 EAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVL 449 (472)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHH
Confidence 1234579999999999999999999865433445889999999999999999988865 47889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 043360 1038 ILAVLPWGIHRAVNFIADSFL 1058 (1108)
Q Consensus 1038 ~~~~~~l~~~~i~k~~~~~~~ 1058 (1108)
+++++.+++.++.|++.|+|.
T Consensus 450 ~~~~~~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 450 KISLPVIGLDEILKFIARNYL 470 (472)
T ss_dssp HHHTHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999988775
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=7.8e-32 Score=273.85 Aligned_cols=143 Identities=23% Similarity=0.430 Sum_probs=136.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCC--CccccchhhhhhcCHHHHHHHhcccceecccCHhh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGSCLADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~--~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~ 781 (1108)
|++++++|+.||++||+|||+|||+..||++||++|||..++. ....++|.+++.+...++.+.+++..+|||++|+|
T Consensus 22 R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~p~~ 101 (168)
T d1wpga2 22 RKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSH 101 (168)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCCHHH
T ss_pred chhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccchhH
Confidence 9999999999999999999999999999999999999987532 34578999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHhh
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKLG 848 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~G 848 (1108)
|..+|+.+|++|++|+|+|| |+||+|||++|||||+|| +|+++|+++||++++ +|+.|.++|+||
T Consensus 102 K~~lv~~l~~~g~~Va~vGD-G~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 102 KSKIVEYLQSYDEITAMTGD-GVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-SGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHhcccceeEEec-CCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999 999999999999999999 899999999999999 899999999998
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.94 E-value=3.9e-32 Score=313.19 Aligned_cols=320 Identities=11% Similarity=-0.003 Sum_probs=228.7
Q ss_pred CchhhcccCceEEEEcccCcccccceEEEEEEECCcccCCCcchhhhHHHHHHHHHHhccccc-ccccCCChhHHHHHHH
Q 043360 505 LSAGATMGIASVICIDVTGGLVCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVL-VPEISLWPTTDWLVSW 583 (1108)
Q Consensus 505 ~~~~E~LG~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~g~p~e~ALl~~ 583 (1108)
+.+.|+||..+++|+|||||+|.|+|++..+..+...... ....++.+ ++++....+|+.. .....++|++.+++..
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~-k~~g~n~~-~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKL-KSLGLNSN-WDMLFIVFSIHLIDILKKLSHDEIEAFMYQ 107 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHH-HHTTCCCH-HHHHHHHHHHHHHHHHTTSCHHHHHHHHHC
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchhhhHhh-hhcCCChh-HHHHHHHHHHHHHHHHhhcCCCcHHHHHHH
Confidence 4567999999999999999999999987554322111000 00001111 1222222222211 1245788999999887
Q ss_pred HHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccchhhHHHH
Q 043360 584 AKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEIKGEKRRF 663 (1108)
Q Consensus 584 a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l~~~~~~~ 663 (1108)
.+..+......++.+.....+||++.+|+|+++....++. +..+.||+++.+... ++.+..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~----~~~~~~~a~~~~~~~--------------~~~~~~~ 169 (380)
T d1qyia_ 108 DEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNI----YAALEEFATTELHVS--------------DATLFSL 169 (380)
T ss_dssp SSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHH----HHHHHHHHHHHTTCS--------------CCGGGST
T ss_pred HhhccchHHHHHHhccccccCCcchHHHHHhhhcccccch----hHhhhhccHhhcCCc--------------HHHHHHH
Confidence 7666566667778888888999999999998875533332 445566776654211 2334556
Q ss_pred HHHHHHHHhCCCeEEEEEEecCcc-hhhhccCceeeEEEec------ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHH
Q 043360 664 QKLIKDMEDSGLRPIAFACGQTEV-SEIKENGLHLLALAGL------REEIKSTVEALRNAGVRIILVSEDELLAVTEVA 736 (1108)
Q Consensus 664 ~~~i~~~a~~GlR~L~~A~k~l~~-~~~~E~~l~llG~i~i------r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA 736 (1108)
++.+.+++.+|+|++++|++.++. ......+....|+++. |+|++++++.|+++|++++|+|||+..+|+.++
T Consensus 170 ~~~~~~~a~~~~r~l~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il 249 (380)
T d1qyia_ 170 KGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPF 249 (380)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHCSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHhhhcccccccccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH
Confidence 678889999999999999987652 2222334445566555 569999999999999999999999999999999
Q ss_pred HHcCCCCCCCCccccchhhhhhcCHHH---------HHHHhcccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCH
Q 043360 737 CELGNFRPESNDIALEGEQFRELNSTE---------RMAKLDSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDT 807 (1108)
Q Consensus 737 ~~~GI~~~~~~~~vi~G~~l~~l~~~~---------~~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~ 807 (1108)
+++||...-+...+++|.+........ -.+.+..+.+++|++|++|..+|+.++..++.|+|||| |.||+
T Consensus 250 ~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD-~~~D~ 328 (380)
T d1qyia_ 250 ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGD-SLADL 328 (380)
T ss_dssp HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEES-SHHHH
T ss_pred HHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECC-CHHHH
Confidence 999997532244566666543221100 01223334478999999999999999999999999999 99999
Q ss_pred HHHhhCC---ccEecCCCccHHHHh----ccchhhcccccHHHHH
Q 043360 808 PALKEAD---VGITEENKCTEMARE----CSDIVISAVGSLLPIL 845 (1108)
Q Consensus 808 ~aLk~Ad---VGIamg~~gte~ak~----aADivl~~f~~I~~li 845 (1108)
+|+|+|| |||+||..|++++++ .||+++.++..|.+++
T Consensus 329 ~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 329 LSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp HHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred HHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence 9999999 999999999987654 8999999999887765
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.92 E-value=6.5e-26 Score=221.09 Aligned_cols=119 Identities=26% Similarity=0.415 Sum_probs=102.7
Q ss_pred eeeEEEec----ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhccc
Q 043360 696 HLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSM 771 (1108)
Q Consensus 696 ~llG~i~i----r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~ 771 (1108)
+..+.+++ |++++++|+.|+++||+++|+|||+..+|.++|++|||..
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~---------------------------- 62 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------- 62 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh----------------------------
Confidence 44445666 9999999999999999999999999999999999999965
Q ss_pred ceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 772 TLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 772 ~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
++++++|++|.++|+.+|+. ++|+|+|| |.||+|||++|||||+|| +|+++++++||++++ +|+.|+++|+
T Consensus 63 -v~~~~~p~~k~~~v~~~q~~-~~v~~vGD-g~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 -VIAEVLPHQKSEEVKKLQAK-EVVAFVGD-GINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp -EECSCCHHHHHHHHHHHTTT-SCEEEEEC-SSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred -hccccchhHHHHHHHHHHcC-CEEEEEeC-CCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 99999999999999999865 69999999 999999999999999999 899999999999999 8999998874
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.92 E-value=5.7e-25 Score=232.79 Aligned_cols=171 Identities=13% Similarity=0.093 Sum_probs=133.5
Q ss_pred eEEEEEEECCcccCCCc--------chhhhHHHHHHHHHHhccccc------------ccccCCChhHHHHHHHHHHcCC
Q 043360 530 VDVSKFCIGEKDVNNDV--------ASEINQAVLQALERGIGASVL------------VPEISLWPTTDWLVSWAKSRSL 589 (1108)
Q Consensus 530 m~v~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~~~------------~~~~~g~p~e~ALl~~a~~~g~ 589 (1108)
|+|+++|++++.+..+. ....++....++..+++|+.. .....|||+|.||+.++.+.|.
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~ 81 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG 81 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHS
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCC
Confidence 99999999887654321 112233444454444445432 1245899999999999999999
Q ss_pred ChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccccCCccccc-hhhHHHHHHHHH
Q 043360 590 NVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIK 668 (1108)
Q Consensus 590 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~~~g~~~~l-~~~~~~~~~~i~ 668 (1108)
+....+++++++..+||+|+||+|+++++.++++. .+++|+|||||.|+++|++++. +|..++| ++.++.+.+.++
T Consensus 82 ~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~--~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~ 158 (214)
T d1q3ia_ 82 SVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQ--SHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYL 158 (214)
T ss_dssp CHHHHHHTSCEEEEEC------CEEEEEECSSCTT--SEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHH
T ss_pred CHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCC--ceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHH
Confidence 99999999999999999999999999998764321 1889999999999999999886 8899999 999999999999
Q ss_pred HHHhCCCeEEEEEEecCc-------------chhhhccCceeeEEEec
Q 043360 669 DMEDSGLRPIAFACGQTE-------------VSEIKENGLHLLALAGL 703 (1108)
Q Consensus 669 ~~a~~GlR~L~~A~k~l~-------------~~~~~E~~l~llG~i~i 703 (1108)
+||.+|+||||+|||+++ ..+..|+||+|+|++||
T Consensus 159 ~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi 206 (214)
T d1q3ia_ 159 ELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSM 206 (214)
T ss_dssp HHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEE
T ss_pred HHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEE
Confidence 999999999999999985 12445789999999999
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.87 E-value=3.1e-22 Score=215.26 Aligned_cols=184 Identities=16% Similarity=0.116 Sum_probs=138.2
Q ss_pred EEEEcccCcccccceEEEEEEECCcccCCCc---------chhhhHHHHHHHHHHhccccc---------ccccCCChhH
Q 043360 516 VICIDVTGGLVCNRVDVSKFCIGEKDVNNDV---------ASEINQAVLQALERGIGASVL---------VPEISLWPTT 577 (1108)
Q Consensus 516 ~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~~~~~~~~---------~~~~~g~p~e 577 (1108)
..+.||++..| +.+.++.+.|..|.+.. .....+.+.+++..+++||.. .+...|+|+|
T Consensus 6 m~v~~~~~~~~---~~~~~~~VtG~~y~p~G~i~~~~~~v~~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE 82 (239)
T d1wpga3 6 MFIIDKVDGDF---CSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATE 82 (239)
T ss_dssp EEEEEEEETTE---EEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHH
T ss_pred EEEEeeecCCc---ccceEEEEEeEeeCCceEEEECCcCcCccccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCc
Confidence 45667764443 34445555555554321 112234555666655556543 2346799999
Q ss_pred HHHHHHHHHcCCChhhh----------------cccceeeeeecCCCCCCeEEEEEEEcCCCc-ceeEEEEEeccHHHHH
Q 043360 578 DWLVSWAKSRSLNVEFV----------------DQNLSVLEHRKLSSNNKVCGVLVKINGGDE-DKIMHMHWSGTASTIL 640 (1108)
Q Consensus 578 ~ALl~~a~~~g~~~~~~----------------~~~~~il~~~~F~s~rkrmsviv~~~~~~~-~~~~~l~~KGA~e~Il 640 (1108)
.||+.++.+.|++.... ++.|++++.+||||+||||+|+++.++++. ...+++|+|||||.||
T Consensus 83 ~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL 162 (239)
T d1wpga3 83 TALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVI 162 (239)
T ss_dssp HHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHH
T ss_pred HHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHH
Confidence 99999999998865432 467899999999999999999999876531 0126899999999999
Q ss_pred hhcccccccCCccccc-hhhHHHHHHHHHHH--HhCCCeEEEEEEecCc------------chhhhccCceeeEEEec
Q 043360 641 NMCSYYYDSEGKSFEI-KGEKRRFQKLIKDM--EDSGLRPIAFACGQTE------------VSEIKENGLHLLALAGL 703 (1108)
Q Consensus 641 ~~c~~~~~~~g~~~~l-~~~~~~~~~~i~~~--a~~GlR~L~~A~k~l~------------~~~~~E~~l~llG~i~i 703 (1108)
++|+.++. +|+.+++ ++.++.+.+.++++ |++|+|||++|||+++ ..+.+|+||+|+|++||
T Consensus 163 ~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 163 DRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp HTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred Hhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 99998876 6778899 99999999999987 6799999999999996 23567999999999996
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.87 E-value=1.5e-22 Score=190.87 Aligned_cols=94 Identities=30% Similarity=0.474 Sum_probs=85.9
Q ss_pred cEEEEEECCEE--EEEEccccccCcEEEEcCCCccCcceEEEe--cCceeeeec-ccCCCCC----------------CC
Q 043360 312 LEVKVVRSGRE--QLIAVSNLLKGDVVRLAKGDRVPGDGLVVN--SDGLMLDDV-LNSEIDP----------------DR 370 (1108)
Q Consensus 312 ~~v~ViRdG~~--~~I~~~dLvvGDIV~l~~Gd~IPaDgill~--g~~l~VdeS-LTGES~p----------------~~ 370 (1108)
+.++|+|+|++ ++|+++||||||||.|++||+|||||+|++ +.+|.|||| |||||.| +.
T Consensus 1 e~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~ 80 (115)
T d1wpga1 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDK 80 (115)
T ss_dssp SEEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGC
T ss_pred CceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeecccccccccccccc
Confidence 36899999984 789999999999999999999999999986 445899999 9999999 35
Q ss_pred CCeeeecceEeeceEEEEEEEeccccHHHHHHHHH
Q 043360 371 NPFLFSGSKVMEGHGTMLLISVGGNIASGQVLRSN 405 (1108)
Q Consensus 371 ~~~l~~Gt~v~~G~~~~~Vv~tG~~T~~g~i~~~~ 405 (1108)
.|++|+||.|.+|+++++|++||.+|.+|++.+.+
T Consensus 81 ~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 81 KNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred cceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 68999999999999999999999999999998764
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.02 E-value=1.9e-10 Score=119.76 Aligned_cols=139 Identities=16% Similarity=0.166 Sum_probs=99.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhh----------------------h----
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQF----------------------R---- 757 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l----------------------~---- 757 (1108)
.+++.++|++|+++|++|+++||+....+..+++.+++..+ .+.-.|..+ .
T Consensus 21 ~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~---~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (230)
T d1wr8a_ 21 HEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP---VVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 97 (230)
T ss_dssp CHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC---EEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcc---cccccceeeeccccccccccccHHHHHHHHHHHhcc
Confidence 67889999999999999999999999999999999988653 000001000 0
Q ss_pred --------------------hcCHHHHHHHhcccc-----------eecccCHhhHHHHHHHHHhC----CCEEEEEeCC
Q 043360 758 --------------------ELNSTERMAKLDSMT-----------LMGSCLADDKLLLVQSVKEK----GHVVAFFGGS 802 (1108)
Q Consensus 758 --------------------~l~~~~~~~~~~~~~-----------V~ar~sP~~K~~iV~~lq~~----g~~Va~iGD~ 802 (1108)
....+.+.++..+.. +-.......|...++.+.++ .+.|+++||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD- 176 (230)
T d1wr8a_ 98 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD- 176 (230)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC-
T ss_pred cccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeec-
Confidence 001122333322221 11122335788888777654 457999999
Q ss_pred CCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHh
Q 043360 803 STRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKL 847 (1108)
Q Consensus 803 G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~ 847 (1108)
|.||.+||+.|++||||| ++.+.+|++||+|+. +...+.+++.+
T Consensus 177 ~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~ 222 (230)
T d1wr8a_ 177 GENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 222 (230)
T ss_dssp SGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred CccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 999999999999999999 899999999999997 66677777654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.85 E-value=2.2e-09 Score=112.15 Aligned_cols=142 Identities=18% Similarity=0.229 Sum_probs=98.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC---CCCccccchh----------hhhh------------
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALEGE----------QFRE------------ 758 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~---~~~~~vi~G~----------~l~~------------ 758 (1108)
.+++.++++.|++.|++++++||.+...+..+++..|+..+ .++..+.+.. ....
T Consensus 22 ~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (225)
T d1l6ra_ 22 STKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMR 101 (225)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCB
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhcCcc
Confidence 67899999999999999999999999999999999998653 0000000000 0000
Q ss_pred ---------------cCH---HHHHHHhcc--cce-----ecccCH--hhHHHHHHHHHhC----CCEEEEEeCCCCCCH
Q 043360 759 ---------------LNS---TERMAKLDS--MTL-----MGSCLA--DDKLLLVQSVKEK----GHVVAFFGGSSTRDT 807 (1108)
Q Consensus 759 ---------------l~~---~~~~~~~~~--~~V-----~ar~sP--~~K~~iV~~lq~~----g~~Va~iGD~G~ND~ 807 (1108)
... +.+.+.... ..+ +....| .+|...++.+.+. ...|+++|| |.||.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GD-s~nD~ 180 (225)
T d1l6ra_ 102 SILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGD-SNNDM 180 (225)
T ss_dssp CCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECC-SGGGH
T ss_pred eeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecC-CcchH
Confidence 000 111111111 111 112223 4788888877654 245888999 99999
Q ss_pred HHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHh
Q 043360 808 PALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKL 847 (1108)
Q Consensus 808 ~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~ 847 (1108)
+|++.|++||||+ ++.+.+|+.||++.. +...|.+++++
T Consensus 181 ~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 181 PMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp HHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999 899999999999887 66777777654
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.84 E-value=1.4e-09 Score=113.40 Aligned_cols=125 Identities=19% Similarity=0.152 Sum_probs=93.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCC----CCccccchhhhhhcCHHHHHHHhcccceecccCH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE----SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~----~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP 779 (1108)
+|++.+.|+.||+.|++++++||.....+..+++.+|+.... .-....+|..... ........+
T Consensus 84 ~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~------------~~~~p~~~~ 151 (217)
T d1nnla_ 84 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGF------------DETQPTAES 151 (217)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEE------------CTTSGGGST
T ss_pred CHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccc------------eeeeeeecc
Confidence 899999999999999999999999999999999999996420 0001112221000 001112456
Q ss_pred hhHHHHHHHHHhC--CCEEEEEeCCCCCCHHHHhhCCccEecCCC-ccHHHHhccchhhcccccH
Q 043360 780 DDKLLLVQSVKEK--GHVVAFFGGSSTRDTPALKEADVGITEENK-CTEMARECSDIVISAVGSL 841 (1108)
Q Consensus 780 ~~K~~iV~~lq~~--g~~Va~iGD~G~ND~~aLk~AdVGIamg~~-gte~ak~aADivl~~f~~I 841 (1108)
..|.++++.++++ -..+.++|| |.||.+|++.|++|||+|.+ ..+..++.||+++.+|..|
T Consensus 152 ~~K~~~v~~~~~~~~~~~~~~vGD-s~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 152 GGKGKVIKLLKEKFHFKKIIMIGD-GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp THHHHHHHHHHHHHCCSCEEEEES-SHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred chHHHHHHHHHhccCccccEEEEe-CHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 7899999999865 246899999 99999999999999999733 4456668899988877654
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.76 E-value=5.6e-09 Score=105.16 Aligned_cols=109 Identities=15% Similarity=0.213 Sum_probs=88.1
Q ss_pred HHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHHHHHHH
Q 043360 709 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKLLLVQS 788 (1108)
Q Consensus 709 ~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~~iV~~ 788 (1108)
.+|+.+++.|+.+.++||+....+...++++++.. ++... .+|...++.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~-----------------------------~~~~~--~~K~~~l~~ 87 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-----------------------------FFLGK--LEKETACFD 87 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-----------------------------EEESC--SCHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc-----------------------------ccccc--ccHHHHHHH
Confidence 47999999999999999999999999999999875 33333 345555554
Q ss_pred HHh-C---CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc------ccccHHHHHH--hhhh
Q 043360 789 VKE-K---GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS------AVGSLLPILK--LGRC 850 (1108)
Q Consensus 789 lq~-~---g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~------~f~~I~~li~--~GR~ 850 (1108)
+.+ . ...|+++|| |.||.+||+.|++|+||+ ++.+.+|+.||+|+. -++.+.+.|. .||+
T Consensus 88 ~~~~~~i~~~~v~~vGD-d~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~ 159 (177)
T d1k1ea_ 88 LMKQAGVTAEQTAYIGD-DSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKS 159 (177)
T ss_dssp HHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCT
T ss_pred HHHHhcCCcceeEEecC-CccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHHHHHHHHCCCh
Confidence 433 3 378999999 999999999999999999 899999999999998 2555666643 3554
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.73 E-value=6.2e-09 Score=111.41 Aligned_cols=64 Identities=16% Similarity=0.219 Sum_probs=53.8
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
+|...|+.+.+. ...++++|| |.||.+||+.|+.|+||+ ++.+..|+.||++.. +=..+.++++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD-~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGD-QENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CcccccceehhhcccchhcEEEEeC-cHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 699999988775 345899999 999999999999999999 899999999999987 3344665553
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.71 E-value=8e-09 Score=111.27 Aligned_cols=64 Identities=19% Similarity=0.220 Sum_probs=55.2
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 781 DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
.|..-++.+.+. | +.|+++|| |.||.+||+.|+.||||+ ++.+.+|+.||++.. +-.++.++|+
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD-~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGD-SLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEES-SGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeC-CHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 799998888765 3 46999999 999999999999999999 899999999999988 5556666654
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.69 E-value=4.8e-09 Score=109.16 Aligned_cols=145 Identities=10% Similarity=0.030 Sum_probs=104.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCC-CCccccchhhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~-~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
+|++.+.++.|++.|+++.++|+-....+..+.+++|+...- ......++...... .........++..|+.|
T Consensus 77 ~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~------~~~~~~~~~~~~k~~~~ 150 (226)
T d2feaa1 77 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID------WPHSCKGTCSNQCGCCK 150 (226)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE------CTTCCCTTCCSCCSSCH
T ss_pred hHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec------cccccccccccCCHHHH
Confidence 899999999999999999999999999999999999876420 00111111111000 00011124567789999
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc-ccccHHHHHHhhhhhhhhh
Q 043360 783 LLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS-AVGSLLPILKLGRCAYCNI 855 (1108)
Q Consensus 783 ~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~-~f~~I~~li~~GR~~~~~i 855 (1108)
..+++.++..++.|+|+|| +.||.+|+++||+++|++..+..+.++..++..- +|+.|...+.+-....+.+
T Consensus 151 ~~~~~~~~~~~~~~i~iGD-s~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~~~ 223 (226)
T d2feaa1 151 PSVIHELSEPNQYIIMIGD-SVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWL 223 (226)
T ss_dssp HHHHHHHCCTTCEEEEEEC-CGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHH
T ss_pred HHHHHHhcCCCceEEEEeC-chhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHHHHHh
Confidence 9999999988999999999 9999999999999999984344444444444333 8888888887655554433
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.65 E-value=2.6e-08 Score=101.10 Aligned_cols=127 Identities=19% Similarity=0.100 Sum_probs=95.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.++....++.+ +.+.++..+++.............++............. ..........+..+.
T Consensus 71 ~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~~~~~~ 135 (206)
T d1rkua_ 71 LEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS--------------DRVVGYQLRQKDPKR 135 (206)
T ss_dssp CTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT--------------SCEEEEECCSSSHHH
T ss_pred cchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecc--------------cccccccccchhhHH
Confidence 56666666655 578999999999999999999999987531011100000 001123344556667
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc-ccccHHHHHHh
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS-AVGSLLPILKL 847 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~-~f~~I~~li~~ 847 (1108)
..++.++-..+.|+++|| |.||.+||+.|++||||+ ++.++.++++|++.. ++..+.++|..
T Consensus 136 ~~~~~~~i~~~eviaiGD-g~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~~~~~d~~~~~~~ 198 (206)
T d1rkua_ 136 QSVIAFKSLYYRVIAAGD-SYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHTTCEEEEEEC-SSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEECSHHHHHHHHHH
T ss_pred HHHHHhcccccceEEecC-CccCHHHHHhCCccEEEC-CCHHHHHhCCCceeecCHHHHHHHHHH
Confidence 778888888899999999 999999999999999997 778888899999987 99999988654
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.64 E-value=8.4e-09 Score=110.29 Aligned_cols=69 Identities=14% Similarity=0.163 Sum_probs=56.6
Q ss_pred ccCHh--hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 776 SCLAD--DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 776 r~sP~--~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
.++|. +|..-++.|.++ | ..|.++|| |.||.+||+.|+.|+||+ ++.+..|+.||+++. +=.++.+.|+
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD-~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGD-SGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcC-CcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 34454 599999888765 3 45899999 999999999999999999 899999999999988 5555665554
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.51 E-value=2e-08 Score=107.06 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=55.5
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHHh
Q 043360 781 DKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILKL 847 (1108)
Q Consensus 781 ~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~~ 847 (1108)
.|..-++.|.++ ...++++|| |.||.+||+.|+.||||+ +|++.+|+.||+|.. +=..+.++|++
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD-~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGD-GGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEEC-SGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecC-CcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 699888888664 356888999 999999999999999999 899999999999877 55677777654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.45 E-value=9.2e-08 Score=102.28 Aligned_cols=54 Identities=17% Similarity=0.233 Sum_probs=47.4
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc
Q 043360 781 DKLLLVQSVKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 836 (1108)
Q Consensus 781 ~K~~iV~~lq~~----g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~ 836 (1108)
.|...++.+.+. ...|+++|| |.||.+||+.|++|+||+ ++.+.+|+.||+++.
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD-~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~ 264 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGD-AENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLP 264 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEEC-SGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECS
T ss_pred hhHHHHHHHhhhcccccceEEEecC-ChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEEC
Confidence 577777766554 357999999 999999999999999999 899999999999986
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.41 E-value=1.4e-07 Score=100.65 Aligned_cols=68 Identities=24% Similarity=0.336 Sum_probs=55.9
Q ss_pred cCHh--hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHHH
Q 043360 777 CLAD--DKLLLVQSVKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPILK 846 (1108)
Q Consensus 777 ~sP~--~K~~iV~~lq~~-g---~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li~ 846 (1108)
++|. .|...|+.+.++ | ..|+++|| |.||.+||+.|++||||| ++.+.+|+.||+++. +-.++..+++
T Consensus 184 i~~~~~~K~~ai~~l~~~~~i~~~~vva~GD-~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 184 IVPKNVDKGKALRFLRERMNWKKEEIVVFGD-NENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EECTTCCHHHHHHHHHHHHTCCGGGEEEEEC-SHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ecCCCCchhHHHHHHHHhhccCcccEEEEcC-CcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 4453 698888887665 2 35888899 999999999999999999 899999999999988 5556666553
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.33 E-value=2.5e-07 Score=96.42 Aligned_cols=41 Identities=24% Similarity=0.262 Sum_probs=37.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 744 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~ 744 (1108)
.+.++++|++|+++|++++++||.....+..+.+++|+..+
T Consensus 19 ~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~ 59 (243)
T d1wzca1 19 PDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETP 59 (243)
T ss_dssp SGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccccc
Confidence 56789999999999999999999999999999999998653
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.31 E-value=2.4e-07 Score=93.92 Aligned_cols=127 Identities=19% Similarity=0.148 Sum_probs=87.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.+++.+.++.++..|..+.++||.....+....++.++... ....+....... .... ...-..+..|.
T Consensus 77 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------~~~~--~~~~~~~~~~~ 144 (210)
T d1j97a_ 77 TEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA--FANRLIVKDGKL--------TGDV--EGEVLKENAKG 144 (210)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEE--EEEEEEEETTEE--------EEEE--ECSSCSTTHHH
T ss_pred hhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhh--hhhhhccccccc--------cccc--ccccccccccc
Confidence 78899999999999999999999999999999999887642 000011000000 0000 00011122333
Q ss_pred HHHHHH----HhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhc--ccccHHHHH
Q 043360 784 LLVQSV----KEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--AVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~l----q~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~--~f~~I~~li 845 (1108)
..++.+ +-..+.+.++|| |.||.+|++.|++|||| ++.+..++.||+++. ++..|.+.|
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGD-s~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGD-GANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEES-SGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred chhhhHHHHhcccccceEEecC-CcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 333333 223456899999 99999999999999999 588999999999998 777776554
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.17 E-value=9.3e-07 Score=92.59 Aligned_cols=127 Identities=11% Similarity=0.059 Sum_probs=84.4
Q ss_pred hHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCC-----CCccccchhhhh--------h-cC------------
Q 043360 707 IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-----SNDIALEGEQFR--------E-LN------------ 760 (1108)
Q Consensus 707 v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~-----~~~~vi~G~~l~--------~-l~------------ 760 (1108)
..+++.++++.|+.+.++||.....+..+.++.++..++ .+..+...+... . ..
T Consensus 23 ~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (244)
T d1s2oa1 23 HLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFE 102 (244)
T ss_dssp HHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTCT
T ss_pred HHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhcc
Confidence 344566678889999999999999999999999987541 111111111000 0 00
Q ss_pred ------------------------H---HHHHHHhccc----ce------eccc--CHhhHHHHHHHHHhC-C---CEEE
Q 043360 761 ------------------------S---TERMAKLDSM----TL------MGSC--LADDKLLLVQSVKEK-G---HVVA 797 (1108)
Q Consensus 761 ------------------------~---~~~~~~~~~~----~V------~ar~--sP~~K~~iV~~lq~~-g---~~Va 797 (1108)
+ +++.+..... .. +..+ ...+|...++.+.+. | ..|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v 182 (244)
T d1s2oa1 103 ALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTL 182 (244)
T ss_dssp TEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred cccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhEE
Confidence 0 1222222111 10 1112 234799988888776 2 4588
Q ss_pred EEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhh
Q 043360 798 FFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVI 835 (1108)
Q Consensus 798 ~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl 835 (1108)
++|| |.||.+||+.|+.|++|| ++.+..|+.||.+.
T Consensus 183 ~~GD-~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~ 218 (244)
T d1s2oa1 183 VCGD-SGNDIGLFETSARGVIVR-NAQPELLHWYDQWG 218 (244)
T ss_dssp EEEC-SGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHC
T ss_pred EEcC-CCCCHHHHhhCCcEEEeC-CCCHHHHHHhhccc
Confidence 8999 999999999999999999 89999999998653
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.11 E-value=3.5e-06 Score=86.53 Aligned_cols=40 Identities=23% Similarity=0.187 Sum_probs=37.4
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 743 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~ 743 (1108)
-+.+.++|++|+++|+.++++||.....+..+.+++|+..
T Consensus 23 ~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 23 WQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 5788999999999999999999999999999999999853
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.62 E-value=1.1e-05 Score=82.74 Aligned_cols=55 Identities=20% Similarity=0.386 Sum_probs=47.3
Q ss_pred hHHHHHHHHHhC-CCEEEEEeCC---CCCCHHHHhhCC-ccEecCCCccHHHHhccchhhc
Q 043360 781 DKLLLVQSVKEK-GHVVAFFGGS---STRDTPALKEAD-VGITEENKCTEMARECSDIVIS 836 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g~~Va~iGD~---G~ND~~aLk~Ad-VGIamg~~gte~ak~aADivl~ 836 (1108)
.|..-++.|.+. ...|.++||. |.||.+||+.|+ .|+||+ ++.|.+|..+||+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFP 244 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcCC
Confidence 688888888765 5689999992 359999999997 699999 899999999999874
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.48 E-value=8.1e-05 Score=76.33 Aligned_cols=123 Identities=14% Similarity=0.118 Sum_probs=84.7
Q ss_pred ccchHHHHHHHHHcC-CEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceeccc-CHhh
Q 043360 704 REEIKSTVEALRNAG-VRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC-LADD 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aG-I~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~-sP~~ 781 (1108)
-||+.+.+++|++.| +++.++|+.....+..+.+..|+... -+.++.+.+ +..+- .|+-
T Consensus 93 ~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~--fd~i~~~~~-----------------~~~~k~~p~~ 153 (228)
T d2hcfa1 93 LEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY--FPFGAFADD-----------------ALDRNELPHI 153 (228)
T ss_dssp CTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT--CSCEECTTT-----------------CSSGGGHHHH
T ss_pred cCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccc--ccccccccc-----------------cccccchhHH
Confidence 689999999999987 89999999999999999999999753 222222221 11111 1111
Q ss_pred HHHHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCC---ccEecCCCccH-HHHhccchhhcccccHHHHHH
Q 043360 782 KLLLVQSVKEK---GHVVAFFGGSSTRDTPALKEAD---VGITEENKCTE-MARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 782 K~~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~Ad---VGIamg~~gte-~ak~aADivl~~f~~I~~li~ 846 (1108)
-...++.+... .+.++|||| +.+|..|-+.|+ |||+.|....+ ..+..+|+++.+++.|.+++.
T Consensus 154 ~~~~~~~~~~~~~~p~~~l~VGD-~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~ 224 (228)
T d2hcfa1 154 ALERARRMTGANYSPSQIVIIGD-TEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHCCCCCGGGEEEEES-SHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHH
T ss_pred HHHHhhhhcccCCChhHheeecC-ChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHH
Confidence 12223333322 357999999 999999999999 45555643333 244468999999999988764
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.24 E-value=3.5e-05 Score=78.51 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=42.5
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccchhhcccccHHH
Q 043360 781 DKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISAVGSLLP 843 (1108)
Q Consensus 781 ~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADivl~~f~~I~~ 843 (1108)
+|..-++.|.++. .++++|| +.||.+||+.|+-|+||+ .|. ++.+|++.+.+...+..
T Consensus 159 ~Kg~al~~l~~~~-~~i~~GD-s~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~~~~ev~~ 216 (229)
T d1u02a_ 159 NKGSAIRSVRGER-PAIIAGD-DATDEAAFEANDDALTIK-VGE--GETHAKFHVADYIEMRK 216 (229)
T ss_dssp CHHHHHHHHHTTS-CEEEEES-SHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEESSHHHHHH
T ss_pred CHHHHHHHHhccc-cceeecC-CCChHHHHhccCCeEEEE-eCC--CCccCeEEcCCHHHHHH
Confidence 6999999998775 4678899 999999999997776654 232 24577888774444333
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.12 E-value=0.00013 Score=74.08 Aligned_cols=123 Identities=20% Similarity=0.186 Sum_probs=85.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++++.++.|++.|+++.++|+.....+..+.+++||... -..++.+.+. -...-.|+--.
T Consensus 97 ~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~--f~~~~~~~~~----------------~~~kp~p~~~~ 158 (224)
T d2hsza1 97 YPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL--FSEMLGGQSL----------------PEIKPHPAPFY 158 (224)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG--CSEEECTTTS----------------SSCTTSSHHHH
T ss_pred HHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhh--cccccccccc----------------ccccccchhhH
Confidence 79999999999999999999999999999999999998642 1112222111 01122333333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc---cEecCCC-ccHHHHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADV---GITEENK-CTEMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV---GIamg~~-gte~ak~aADivl~~f~~I~~li 845 (1108)
.+.+.++-....++|+|| ..+|..+-+.|++ ++..|.. ..+.....+|+++.+++.|.+++
T Consensus 159 ~~~~~~~~~~~~~~~igD-~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii 223 (224)
T d2hsza1 159 YLCGKFGLYPKQILFVGD-SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 223 (224)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred HHHHHhhhhhhccchhcC-cHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence 444444444678999999 9999999999987 3333322 22345556899988888887654
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.00 E-value=0.00029 Score=71.29 Aligned_cols=119 Identities=13% Similarity=0.049 Sum_probs=80.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.++++.|+++|+++.++|+.....+..+.+..|+... -..++.+++.. .++-.|+-=.
T Consensus 90 ~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~--F~~i~~~~~~~----------------~~Kp~~~~~~ 151 (218)
T d1te2a_ 90 LPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS--FDALASAEKLP----------------YSKPHPQVYL 151 (218)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEECTTSS----------------CCTTSTHHHH
T ss_pred cchHHHHHHHhhhcccccccccccccccccccccccccccc--ccccccccccc----------------cchhhHHHHH
Confidence 69999999999999999999999999999999999999642 22233333211 1112222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe-c--CCCccHHHHhccchhhcccccH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT-E--ENKCTEMARECSDIVISAVGSL 841 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa-m--g~~gte~ak~aADivl~~f~~I 841 (1108)
.+++.+.-..+.++|+|| ..+|..|-+.|++... + +....+.....||+++.+|..|
T Consensus 152 ~~~~~l~~~~~~~l~igD-~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 152 DCAAKLGVDPLTCVALED-SVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp HHHHHHTSCGGGEEEEES-SHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred HHHHHcCCCchhcEEEee-CHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence 344444333567999999 9999999999997532 2 1111222234578887777654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.83 E-value=0.00083 Score=69.76 Aligned_cols=125 Identities=14% Similarity=0.107 Sum_probs=86.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.++++.|++.|+++.++||.....+..+-+..|+... ..+.++.+++.. ...-.|+.=.
T Consensus 101 ~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~-f~d~~~~~d~~~----------------~~KP~p~~~~ 163 (257)
T d1swva_ 101 INGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGY-KPDFLVTPDDVP----------------AGRPYPWMCY 163 (257)
T ss_dssp CTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTC-CCSCCBCGGGSS----------------CCTTSSHHHH
T ss_pred CCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccc-cccccccccccc----------------ccccChHHHH
Confidence 79999999999999999999999999999999999998652 123344444321 1122333334
Q ss_pred HHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCc---cEecCCCc---cH---------------------HHHhccchhh
Q 043360 784 LLVQSVKEK-GHVVAFFGGSSTRDTPALKEADV---GITEENKC---TE---------------------MARECSDIVI 835 (1108)
Q Consensus 784 ~iV~~lq~~-g~~Va~iGD~G~ND~~aLk~AdV---GIamg~~g---te---------------------~ak~aADivl 835 (1108)
...+.+.-. .+.++|||| ..+|+.+=+.|++ ||+-|.+- ++ ..+..||+++
T Consensus 164 ~~~~~l~~~p~~~~v~VgD-s~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi 242 (257)
T d1swva_ 164 KNAMELGVYPMNHMIKVGD-TVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI 242 (257)
T ss_dssp HHHHHHTCCSGGGEEEEES-SHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHhCCCCcceEEEEeC-ChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 444444322 357999999 9999999999986 44333110 00 0112389999
Q ss_pred cccccHHHHHH
Q 043360 836 SAVGSLLPILK 846 (1108)
Q Consensus 836 ~~f~~I~~li~ 846 (1108)
.++..|..+|.
T Consensus 243 ~~l~eL~~ii~ 253 (257)
T d1swva_ 243 ETMQELESVME 253 (257)
T ss_dssp SSGGGHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 98888888774
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.82 E-value=0.0027 Score=59.65 Aligned_cols=108 Identities=16% Similarity=0.182 Sum_probs=73.0
Q ss_pred cccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccc
Q 043360 569 PEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYD 648 (1108)
Q Consensus 569 ~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~ 648 (1108)
+..+.||+.+|++++|++.+.... ......-....||....+..++.+ +|. .+.+|++..+.+.+...
T Consensus 26 E~~SeHPlakAIv~~Ak~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~---~g~------~v~~G~~~~~~~~~~~~-- 93 (136)
T d2a29a1 26 SLADETPEGRSIVILAKQRFNLRE-RDVQSLHATFVPFTAQSRMSGINI---DNR------MIRKGSVDAIRRHVEAN-- 93 (136)
T ss_dssp HHTCCSHHHHHHHHHHHHHHCCCC-CCTTTTTCEEEEEETTTTEEEEEE---TTE------EEEEECHHHHHHHHHHH--
T ss_pred hCCCCchHHHHHHHHHHHhcCCCc-cccccccccccccccccceEEEEE---CCE------EEEecHHHHHHHHHHHc--
Confidence 356899999999999996643221 112233345567777766555543 443 45679998876544321
Q ss_pred cCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEecccc
Q 043360 649 SEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREE 706 (1108)
Q Consensus 649 ~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~ir~~ 706 (1108)
|. .....+.+.+++++.+|..++.+|. |-.++|++++.+.
T Consensus 94 --g~-----~~~~~~~~~~~~~~~~G~Tvv~Va~-----------d~~~~G~i~l~D~ 133 (136)
T d2a29a1 94 --GG-----HFPTDVDQKVDQVARQGATPLVVVE-----------GSRVLGVIALKDI 133 (136)
T ss_dssp --TC-----CCCHHHHHHHHHHHHTTSEEEEEEE-----------TTEEEEEEEEEES
T ss_pred --CC-----CCcHHHHHHHHHHHHCCCeEEEEEE-----------CCEEEEEEEEEee
Confidence 10 1246778889999999999999998 4499999998444
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.45 E-value=0.00066 Score=68.08 Aligned_cols=120 Identities=13% Similarity=0.039 Sum_probs=80.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.+++.+.++.+++.+ ++.++|+.....+..+.+..|+... -+.++.+.+ .....|+-..
T Consensus 86 ~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~--fd~v~~~~~------------------~~~~~p~~~~ 144 (210)
T d2ah5a1 86 FPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHF--FDGIYGSSP------------------EAPHKADVIH 144 (210)
T ss_dssp CTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGG--CSEEEEECS------------------SCCSHHHHHH
T ss_pred hhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccc--ccccccccc------------------cccccccccc
Confidence 789999999999775 8999999999999999999998753 222222221 1122233222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc---cEecCCCccHH-HHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADV---GITEENKCTEM-ARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV---GIamg~~gte~-ak~aADivl~~f~~I~~li 845 (1108)
.+.+.++-..+.++|||| +.||..|-+.|++ +|..|....+. ....+|+++.++..|...+
T Consensus 145 ~~~~~~~~~~~~~v~VGD-s~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~l 209 (210)
T d2ah5a1 145 QALQTHQLAPEQAIIIGD-TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYF 209 (210)
T ss_dssp HHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHHT
T ss_pred hhhhhhhcccccceeecC-CHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHHh
Confidence 233332222457999999 9999999999997 45445333332 3345899987887776543
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.09 E-value=0.0071 Score=61.29 Aligned_cols=123 Identities=13% Similarity=0.130 Sum_probs=80.6
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.++++.|+ +|+++.++|+........+.+.+|+... -..++.+.+.. ...-.|+-=.
T Consensus 102 ~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~~----------------~~KP~~~~~~ 162 (230)
T d1x42a1 102 YPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDL--FDSITTSEEAG----------------FFKPHPRIFE 162 (230)
T ss_dssp CTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGG--CSEEEEHHHHT----------------BCTTSHHHHH
T ss_pred cccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccc--ccccccccccc----------------ccchhhHHHH
Confidence 799999999996 5899999999999999999999998642 22333332221 1111121112
Q ss_pred HHHHHHHhCCCEEEEEeCCC-CCCHHHHhhCCccEe-cCCCc-cHHHHhccchhhcccccHHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSS-TRDTPALKEADVGIT-EENKC-TEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G-~ND~~aLk~AdVGIa-mg~~g-te~ak~aADivl~~f~~I~~li~ 846 (1108)
.+.+.+.-....++|+|| . .+|+.+-++|++-.. +...+ .......+|+++.+++.|.++++
T Consensus 163 ~~~~~l~~~p~~~l~vgD-~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~ 227 (230)
T d1x42a1 163 LALKKAGVKGEEAVYVGD-NPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVD 227 (230)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHH
T ss_pred HHHhhhcccccccceeec-CcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHHH
Confidence 222333222456999999 7 589999898887532 22112 22244578999889999988875
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.99 E-value=0.0033 Score=66.87 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=38.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCC
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 743 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~ 743 (1108)
|+|+++.++.|++.|+.+.++||--......++++.|+..
T Consensus 137 r~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~ 176 (291)
T d2bdua1 137 KEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYH 176 (291)
T ss_dssp CBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCB
T ss_pred ccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999999999999999875
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.81 E-value=0.0034 Score=62.42 Aligned_cols=117 Identities=10% Similarity=0.077 Sum_probs=74.8
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.++++.|++.|+++.++|+... .+..+-+..|+... -..++.+++. ....-.|+--.
T Consensus 84 ~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~--f~~i~~s~~~----------------~~~Kp~~~~~~ 144 (204)
T d2go7a1 84 MPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY--FTEILTSQSG----------------FVRKPSPEAAT 144 (204)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG--EEEEECGGGC----------------CCCTTSSHHHH
T ss_pred cchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc--cccccccccc----------------cccchhHHHHH
Confidence 79999999999999999999998554 56678888998752 1222222211 11122333333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccE-ecCCCccHHHHhccchhhcccccHHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGI-TEENKCTEMARECSDIVISAVGSLLPIL 845 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGI-amg~~gte~ak~aADivl~~f~~I~~li 845 (1108)
.+.+.+.-....++|||| +.+|..+-+.|++.. ++. .|. ..+|..+.++..|.+++
T Consensus 145 ~~~~~~~~~p~~~l~VgD-~~~Di~~A~~~G~~~i~v~-~~~----~~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 145 YLLDKYQLNSDNTYYIGD-RTLDVEFAQNSGIQSINFL-EST----YEGNHRIQALADISRIF 201 (204)
T ss_dssp HHHHHHTCCGGGEEEEES-SHHHHHHHHHHTCEEEESS-CCS----CTTEEECSSTTHHHHHT
T ss_pred HHHHHhCCCCceEEEEeC-CHHHHHHHHHcCCeEEEEc-CCC----CCcCeecCCHHHHHHHh
Confidence 344444333468999999 999999999999853 344 332 23455555666555543
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=95.78 E-value=0.0099 Score=58.40 Aligned_cols=134 Identities=13% Similarity=0.108 Sum_probs=74.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHH---------------HHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHh
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLA---------------VTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 768 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~t---------------A~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~ 768 (1108)
-|++.++++.|+++|+++.++|...... ........|+... ...+.... .+... ...
T Consensus 29 ~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~cp~~----p~~~~-~~~ 100 (182)
T d2gmwa1 29 IDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD---GIYYCPHH----PQGSV-EEF 100 (182)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS---EEEEECCB----TTCSS-GGG
T ss_pred CCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc---ceeecccc----ccccc-ccc
Confidence 5899999999999999999999865211 0111111222110 00000000 00000 000
Q ss_pred cccceecccCHhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc--Eec--CCCccHHHHhccchhhcccccHHHH
Q 043360 769 DSMTLMGSCLADDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG--ITE--ENKCTEMARECSDIVISAVGSLLPI 844 (1108)
Q Consensus 769 ~~~~V~ar~sP~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG--Iam--g~~gte~ak~aADivl~~f~~I~~l 844 (1108)
.+-..+..=.|.-=..+.+.+.-.-+.+.|||| ..+|..|=+.|+++ +.+ |..-.+.....||+++.++..++++
T Consensus 101 ~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGD-s~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 101 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGD-KLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEES-SHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred cccccccCCccccccchhhhcccccccccccCC-CHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 000011122233333444444333456899999 99999999999985 332 3222445666799999999999988
Q ss_pred HH
Q 043360 845 LK 846 (1108)
Q Consensus 845 i~ 846 (1108)
|+
T Consensus 180 ik 181 (182)
T d2gmwa1 180 IK 181 (182)
T ss_dssp HH
T ss_pred hc
Confidence 76
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.32 E-value=0.012 Score=59.41 Aligned_cols=119 Identities=14% Similarity=0.099 Sum_probs=76.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.+.+++|++.|+++.++|+..........+.+|+..-. ...+...++. ...+-.|+-=.
T Consensus 129 ~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~----------------~~~KP~p~~~~ 191 (253)
T d1zs9a1 129 FADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELVDGHFDTK----------------IGHKVESESYR 191 (253)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGCSEEECGG----------------GCCTTCHHHHH
T ss_pred CCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhh-hhcceeeccc----------------cccCCCcHHHH
Confidence 799999999999999999999999999999999999976420 0000000000 11122222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEec----CCCccHHHHhccchhhccccc
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITE----ENKCTEMARECSDIVISAVGS 840 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIam----g~~gte~ak~aADivl~~f~~ 840 (1108)
...+.+.-.-+.++|+|| ..+|+.+-++|++-... |.....-....++.++.+|..
T Consensus 192 ~~~~~~~~~p~~~l~vgD-~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~E 251 (253)
T d1zs9a1 192 KIADSIGCSTNNILFLTD-VTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSE 251 (253)
T ss_dssp HHHHHHTSCGGGEEEEES-CHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGG
T ss_pred HHHHHhCCCcCcEEEEeC-CHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHH
Confidence 333333333567999999 89999999999986442 322232333555666655543
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.04 E-value=0.0022 Score=64.06 Aligned_cols=119 Identities=13% Similarity=0.052 Sum_probs=77.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+.+.++.|+ +++++.++|+-....+..+.++.|+... -..++.+.+.. ...-.|+--.
T Consensus 84 ~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~----------------~~KP~p~~~~ 144 (207)
T d2hdoa1 84 YPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMR--MAVTISADDTP----------------KRKPDPLPLL 144 (207)
T ss_dssp CTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGG--EEEEECGGGSS----------------CCTTSSHHHH
T ss_pred ccchhhhhhhhc-cccccccccccccccccccccccccccc--ccccccccccc----------------cchhhhhhhc
Confidence 799999999997 4799999999999999999999998652 12222222110 1111223223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEec---CCCccHHHHhccchhhcccccHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITE---ENKCTEMARECSDIVISAVGSLLP 843 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIam---g~~gte~ak~aADivl~~f~~I~~ 843 (1108)
.+++.++-..+.++|||| ..+|..+-++|++.... | .......+.+|.++.++..|.+
T Consensus 145 ~~~~~~~~~~~~~l~VgD-s~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~~l~dll~ 205 (207)
T d2hdoa1 145 TALEKVNVAPQNALFIGD-SVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQKPLDILE 205 (207)
T ss_dssp HHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEESSGGGGGG
T ss_pred ccccceeeeccceeEecC-CHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeCCHHHHHh
Confidence 333333322357899999 99999999999887552 3 2233344567777766666543
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.68 E-value=0.0051 Score=62.14 Aligned_cols=51 Identities=18% Similarity=0.356 Sum_probs=35.1
Q ss_pred hHHHHHHHHHhC-CCEEEEEeCC---CCCCHHHHhhCC-ccEecCCCccHHHHhccch
Q 043360 781 DKLLLVQSVKEK-GHVVAFFGGS---STRDTPALKEAD-VGITEENKCTEMARECSDI 833 (1108)
Q Consensus 781 ~K~~iV~~lq~~-g~~Va~iGD~---G~ND~~aLk~Ad-VGIamg~~gte~ak~aADi 833 (1108)
+|..-++.|.+. .+.|+++||. |.||.+||+.|+ .|++++ +..|+ |+.+|-
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~~-~~~~~~ 240 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDT-RRICEL 240 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHH-HHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CHHHH-HHHHHH
Confidence 577666666543 5789999992 449999999997 688887 55544 344443
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.52 E-value=0.023 Score=57.79 Aligned_cols=124 Identities=13% Similarity=0.086 Sum_probs=79.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.|++.++++.|++ |+++.++|+.........-+.+|+... -..++.+.+.. .+.-.|+==.
T Consensus 111 ~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~~----------------~~KP~p~~~~ 171 (247)
T d2gfha1 111 ADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY--FDAIVIGGEQK----------------EEKPAPSIFY 171 (247)
T ss_dssp CHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG--CSEEEEGGGSS----------------SCTTCHHHHH
T ss_pred CccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccc--ccccccccccc----------------cchhhhhhHH
Confidence 7899999999985 899999999999999999999998642 12223222211 0111111112
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCcc-Eec-CCCcc--HHHHhccchhhcccccHHHHHHh
Q 043360 784 LLVQSVKEKGHVVAFFGGSST-RDTPALKEADVG-ITE-ENKCT--EMARECSDIVISAVGSLLPILKL 847 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~-ND~~aLk~AdVG-Iam-g~~gt--e~ak~aADivl~~f~~I~~li~~ 847 (1108)
.+.+.+.-..+.++|||| .. +|+.+-+.|++. +.. ...+. +.....+|+++.++..|.++++.
T Consensus 172 ~~~~~~~~~~~~~l~iGD-~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~~ 239 (247)
T d2gfha1 172 HCCDLLGVQPGDCVMVGD-TLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQS 239 (247)
T ss_dssp HHHHHHTCCGGGEEEEES-CTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHHH
T ss_pred HHHHHhhcCHHhcceecc-ChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHHH
Confidence 222223222356999999 85 899999999986 432 11111 11224478888888888888753
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.66 E-value=0.029 Score=53.79 Aligned_cols=87 Identities=11% Similarity=-0.002 Sum_probs=59.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCc-HHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDE-LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDK 782 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~-~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K 782 (1108)
.|++.++++.|++.|+++.++|.-+ ...+..+-+..++... .. .+.+.-.|.-+
T Consensus 48 ~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~--~~-----------------------~~~~~~kp~~~ 102 (164)
T d1u7pa_ 48 YPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKY--FI-----------------------QREIYPGSKVT 102 (164)
T ss_dssp CTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGG--CS-----------------------EEEESSSCHHH
T ss_pred chHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccc--ce-----------------------eeecccCCChH
Confidence 8999999999999999999999654 4566666677666431 00 02223333332
Q ss_pred --HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 783 --LLLVQSVKEKGHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 783 --~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
..+.+.+.-..+.++|+|| ..+|+.+-++|++-
T Consensus 103 ~~~~~~~~~~~~~~~~l~igD-~~~di~aA~~aG~~ 137 (164)
T d1u7pa_ 103 HFERLHHKTGVPFSQMVFFDD-ENRNIIDVGRLGVT 137 (164)
T ss_dssp HHHHHHHHHCCCGGGEEEEES-CHHHHHHHHTTTCE
T ss_pred HHHHHHHHhCCChHHEEEEcC-CHHHHHHHHHcCCE
Confidence 2333333333568999999 99999999999873
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=93.43 E-value=0.028 Score=57.82 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=28.7
Q ss_pred cchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHc
Q 043360 705 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL 739 (1108)
Q Consensus 705 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~ 739 (1108)
|++.++|+.|+++|++++.+|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 57889999999999999999987766666665543
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.17 E-value=0.28 Score=43.81 Aligned_cols=90 Identities=12% Similarity=0.145 Sum_probs=61.6
Q ss_pred cccCCChhHHHHHHHHHHcCCChhhhcccceeeeeecCCCCCCeEEEEEEEcCCCcceeEEEEEeccHHHHHhhcccccc
Q 043360 569 PEISLWPTTDWLVSWAKSRSLNVEFVDQNLSVLEHRKLSSNNKVCGVLVKINGGDEDKIMHMHWSGTASTILNMCSYYYD 648 (1108)
Q Consensus 569 ~~~~g~p~e~ALl~~a~~~g~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~~~~l~~KGA~e~Il~~c~~~~~ 648 (1108)
+..+.||..+|+++++++.+.+..... + .... ...++-. +. +++ |+++.+-+....
T Consensus 23 E~~S~HPlA~AIv~~a~~~~~~~~~~~-~---~~~~------~G~Gi~g-----~~---v~v---G~~~~~~~~~~~--- 78 (113)
T d2b8ea2 23 ERRSEHPIAEAIVKKALEHGIELGEPE-K---VEVI------AGEGVVA-----DG---ILV---GNKRLMEDFGVA--- 78 (113)
T ss_dssp TTTCCSHHHHHHHHHHHTTTCCCCCCS-C---EEEE------TTTEEEE-----TT---EEE---ECHHHHHHTTCC---
T ss_pred HCcCCCchHHHHHHHHHHhcCCCCccc-c---ceee------ccceEEe-----EE---EEE---CcHHHHHhcCCC---
Confidence 677999999999999998776543221 1 1111 1223322 22 544 999998654322
Q ss_pred cCCccccchhhHHHHHHHHHHHHhCCCeEEEEEEecCcchhhhccCceeeEEEec
Q 043360 649 SEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL 703 (1108)
Q Consensus 649 ~~g~~~~l~~~~~~~~~~i~~~a~~GlR~L~~A~k~l~~~~~~E~~l~llG~i~i 703 (1108)
..+.+.+.++++..+|..++.++... .++|++++
T Consensus 79 ----------~~~~~~~~~~~~~~~G~T~v~va~d~-----------~~~G~ial 112 (113)
T d2b8ea2 79 ----------VSNEVELALEKLEREAKTAVIVARNG-----------RVEGIIAV 112 (113)
T ss_dssp ----------CCHHHHHHHHHHHTTTCEEEEEEETT-----------EEEEEEEE
T ss_pred ----------CCHHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEEEE
Confidence 13567788999999999999999844 89999875
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=92.47 E-value=0.088 Score=51.05 Aligned_cols=107 Identities=17% Similarity=0.046 Sum_probs=67.7
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.||+++.++.|++.|+++.++|+-.... ..+-+..|+... -..++.+++... ..-.|+--.
T Consensus 81 ~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~--fd~i~~~~~~~~----------------~KP~p~~~~ 141 (187)
T d2fi1a1 81 FEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAAY--FTEVVTSSSGFK----------------RKPNPESML 141 (187)
T ss_dssp CTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGGG--EEEEECGGGCCC----------------CTTSCHHHH
T ss_pred cchhHHHHHHHHhhhccccccccCccch-hhhhhhhccccc--cccccccccccc----------------cCCCHHHHH
Confidence 7999999999999999999999876655 456778887642 122222222110 011122222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEecCCCccHHHHhccch
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI 833 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIamg~~gte~ak~aADi 833 (1108)
.+.+.+. -+.+.|+|| ..+|..+-++|++=.. +.++.+-.++.-||
T Consensus 142 ~~~~~~~--~~~~l~vgD-s~~Di~aA~~aG~~~i-~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 142 YLREKYQ--ISSGLVIGD-RPIDIEAGQAAGLDTH-LFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHTT--CSSEEEEES-SHHHHHHHHHTTCEEE-ECSCHHHHHHHHTC
T ss_pred HHHHHcC--CCCeEEEeC-CHHHHHHHHHcCCEEE-EECCCCChHhhcCC
Confidence 2222221 234899999 9999999999987643 23566666666654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=92.00 E-value=0.12 Score=52.94 Aligned_cols=52 Identities=21% Similarity=0.237 Sum_probs=36.2
Q ss_pred CCEEEEEeCCCC-CCHHHHhhCCc-cEec--CCCccHHHHh---ccchhhcccccHHHHH
Q 043360 793 GHVVAFFGGSST-RDTPALKEADV-GITE--ENKCTEMARE---CSDIVISAVGSLLPIL 845 (1108)
Q Consensus 793 g~~Va~iGD~G~-ND~~aLk~AdV-GIam--g~~gte~ak~---aADivl~~f~~I~~li 845 (1108)
.+.++|||| .. ||+.+-+.|++ +|.+ |....+-... .+|+++.++..|.++|
T Consensus 202 ~~~~lmVGD-~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l 260 (261)
T d1vjra_ 202 KERMAMVGD-RLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 260 (261)
T ss_dssp GGGEEEEES-CHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred chhcceecC-ChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 568999999 95 69999999996 4444 3222222222 2488988888888776
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.92 E-value=0.2 Score=50.12 Aligned_cols=124 Identities=19% Similarity=0.232 Sum_probs=84.0
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhh--------------------hcCHHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFR--------------------ELNSTE 763 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~--------------------~l~~~~ 763 (1108)
=||+.++++.++++ ....++|---.+-++++|+..|+..+ ..-+--+++ ..+.++
T Consensus 83 vpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e----~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~ee 157 (308)
T d1y8aa1 83 VPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE----LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 157 (308)
T ss_dssp CTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE----EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred cCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce----eecccccccccCCChHHHHHHHHHhhhccCccHHH
Confidence 68999999999876 67888888888999999999999631 111111111 111122
Q ss_pred HH-------------HHhcccceecccCHhhHHHHHHHHHhC-C-CEEEEEeCCCCCCHHHHhhCCc--cEecCCCccHH
Q 043360 764 RM-------------AKLDSMTLMGSCLADDKLLLVQSVKEK-G-HVVAFFGGSSTRDTPALKEADV--GITEENKCTEM 826 (1108)
Q Consensus 764 ~~-------------~~~~~~~V~ar~sP~~K~~iV~~lq~~-g-~~Va~iGD~G~ND~~aLk~AdV--GIamg~~gte~ 826 (1108)
+. +++++++... -..|..+++..-+. + ..-+++|| .+.|+.||+.|.= |+|+.-+|.+-
T Consensus 158 l~e~~d~~f~~~e~~~i~e~Vk~VG---gg~k~~i~~~~~~~~~~~~~~~VGD-SITDve~Lr~~r~~gGlaIsFNGN~Y 233 (308)
T d1y8aa1 158 LFRKLDELFSRSEVRKIVESVKAVG---AGEKAKIMRGYCESKGIDFPVVVGD-SISDYKMFEAARGLGGVAIAFNGNEY 233 (308)
T ss_dssp HHHHHHHHHHSHHHHHHHHTCBCCC---HHHHHHHHHHHHHHHTCSSCEEEEC-SGGGHHHHHHHHHTTCEEEEESCCHH
T ss_pred HHHHHHHHhccchHhhHHhhhcccC---CchhHHHHHhhcccccCCcceeccC-ccccHHHHHHHhcCCCeeEEecCccc
Confidence 22 2223333222 25677777655433 2 23488999 9999999998754 77777789999
Q ss_pred HHhccchhhc
Q 043360 827 ARECSDIVIS 836 (1108)
Q Consensus 827 ak~aADivl~ 836 (1108)
|-..||+++.
T Consensus 234 al~eA~Vaii 243 (308)
T d1y8aa1 234 ALKHADVVII 243 (308)
T ss_dssp HHTTCSEEEE
T ss_pred cccccceEEe
Confidence 9999999988
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=91.60 E-value=0.086 Score=52.44 Aligned_cols=84 Identities=17% Similarity=0.247 Sum_probs=61.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCc----HHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDE----LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~----~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP 779 (1108)
-|++.+.++.+++.|++|+.+||.. ..|++++-+.+|+...+...+ ++.+-.|
T Consensus 88 ~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~v-----------------------ll~~~~~ 144 (209)
T d2b82a1 88 KEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPV-----------------------IFAGDKP 144 (209)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCC-----------------------EECCCCT
T ss_pred chhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccce-----------------------EeeCCCC
Confidence 5799999999999999999999974 467788888899875322222 2322222
Q ss_pred --hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc
Q 043360 780 --DDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADV 815 (1108)
Q Consensus 780 --~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV 815 (1108)
..|.+.|+ ++ .+++++|| -.+|..+-++|++
T Consensus 145 ~K~~rr~~Ik---~y-~I~l~~GD-~l~Df~aA~eagi 177 (209)
T d2b82a1 145 GQNTKSQWLQ---DK-NIRIFYGD-SDNDITAARDVGA 177 (209)
T ss_dssp TCCCSHHHHH---HT-TEEEEEES-SHHHHHHHHHTTC
T ss_pred CchHHHHHHH---Hc-CeEEEecC-CHHHHhHHHHcCC
Confidence 33555443 33 58999999 9999999888875
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=91.45 E-value=0.055 Score=53.55 Aligned_cols=122 Identities=11% Similarity=0.129 Sum_probs=79.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.+++.++++.+++.|+++.++|.-....+..+-+..++... -+.++...+.. ...-.|+-=.
T Consensus 95 ~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~--fd~~~~s~~~~----------------~~KP~p~~~~ 156 (220)
T d1zrna_ 95 FSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG--FDHLLSVDPVQ----------------VYKPDNRVYE 156 (220)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEESGGGT----------------CCTTSHHHHH
T ss_pred cchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccc--ccceeeeeeee----------------ccccHHHHHH
Confidence 78999999999999999999999999999999888887753 22333332221 1112222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe-cCCCcc--HHHHhccchhhcccccHHHH
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT-EENKCT--EMARECSDIVISAVGSLLPI 844 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa-mg~~gt--e~ak~aADivl~~f~~I~~l 844 (1108)
.+.+.+.-.-+.++|||| ..+|+-+-++|++--. +...+. +-....+|+++.++..|.++
T Consensus 157 ~~~~~~g~~p~e~l~VgD-~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 157 LAEQALGLDRSAILFVAS-NAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp HHHHHHTSCGGGEEEEES-CHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHHHHhCCCCceEEEEec-ChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence 233333323457999999 8899999999987744 321111 11224578887777766543
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=90.55 E-value=0.0076 Score=56.73 Aligned_cols=94 Identities=11% Similarity=-0.091 Sum_probs=55.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHh--cccceec------
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL--DSMTLMG------ 775 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~--~~~~V~a------ 775 (1108)
.|++.+.++.|+++|+++.++||.....+..+.+. +... ...+.+.. +....+.
T Consensus 38 ~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~-----------------l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 99 (149)
T d1ltqa1 38 NPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKY-----------------YRMT-RKWVEDIAGVPLVMQCQREQGDT 99 (149)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHH-----------------HHHH-HHHHHHTTCCCCSEEEECCTTCC
T ss_pred CHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHH-----------------HHHH-hhhhhhcCCCcEEEeeccccccc
Confidence 79999999999999999999999753211100000 0000 00000000 0001111
Q ss_pred ccCHhhHHHHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCcc
Q 043360 776 SCLADDKLLLVQSVKEK-GHVVAFFGGSSTRDTPALKEADVG 816 (1108)
Q Consensus 776 r~sP~~K~~iV~~lq~~-g~~Va~iGD~G~ND~~aLk~AdVG 816 (1108)
|-.+.-|..+.+.+... ..+++|+|| -..|+.|.+++++=
T Consensus 100 ~~d~~~k~~~l~~~~~~~~~i~~~igD-~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 100 RKDDVVKEEIFWKHIAPHFDVKLAIDD-RTQVVEMWRRIGVE 140 (149)
T ss_dssp SCHHHHHHHHHHHHTTTTCEEEEEEEC-CHHHHHHHHHTTCC
T ss_pred CCchHHHHHHHHHhccCCCceEEEEcC-CHHHHHHHHHCCCc
Confidence 22345677777666554 456788999 99999999998764
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.72 E-value=0.24 Score=48.62 Aligned_cols=104 Identities=14% Similarity=0.089 Sum_probs=66.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecC----CcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH
Q 043360 704 REEIKSTVEALRNAGVRIILVSE----DELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTG----D~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP 779 (1108)
+|++.+.++.|+++|+++.++|+ .............|+... -+.++.+.+.. ...-.|
T Consensus 99 ~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~--fd~i~~s~~~~----------------~~KP~p 160 (222)
T d1cr6a1 99 NRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH--FDFLIESCQVG----------------MIKPEP 160 (222)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG--CSEEEEHHHHS----------------CCTTCH
T ss_pred CccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh--hceeeehhhcc----------------CCCCCh
Confidence 89999999999999999999995 233344445555565431 12233332221 122344
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-cEecCCCccHHH
Q 043360 780 DDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADV-GITEENKCTEMA 827 (1108)
Q Consensus 780 ~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV-GIamg~~gte~a 827 (1108)
+--....+.++-.-+.++|||| ..+|+.+-+.|++ +|-+. ++.+..
T Consensus 161 ~~~~~~~~~~~v~p~~~l~IgD-~~~Di~~A~~aG~~ti~V~-~~~~~~ 207 (222)
T d1cr6a1 161 QIYNFLLDTLKAKPNEVVFLDD-FGSNLKPARDMGMVTILVH-NTASAL 207 (222)
T ss_dssp HHHHHHHHHHTSCTTSEEEEES-SSTTTHHHHHHTCEEEECC-SSSHHH
T ss_pred HHHHHHHHHhCCCcceEEEEEC-CHHHHHHHHHcCCEEEEEC-CcchHH
Confidence 4444555555544567899999 8999999999987 45444 455544
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=89.52 E-value=0.11 Score=51.51 Aligned_cols=93 Identities=12% Similarity=0.066 Sum_probs=62.3
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
-||+.+.++.|++.|+++.++|+... +..+-+..|+... -..++.+.+.. ...|+-+
T Consensus 93 ~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~--f~~i~~~~~~~------------------~~KP~~~- 149 (221)
T d1o08a_ 93 YPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGY--FDAIADPAEVA------------------ASKPAPD- 149 (221)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGG--CSEECCTTTSS------------------SCTTSTH-
T ss_pred cCCceeccccccccccceEEEeecch--hhHHHHhhccccc--ccccccccccc------------------ccccChH-
Confidence 78999999999999999999999754 5677788888753 22333333211 1222211
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCc-cEecC
Q 043360 784 LLVQSVKEK---GHVVAFFGGSSTRDTPALKEADV-GITEE 820 (1108)
Q Consensus 784 ~iV~~lq~~---g~~Va~iGD~G~ND~~aLk~AdV-GIamg 820 (1108)
-+-+.+++. .+.++|||| ..+|+.|-+.|++ .|+++
T Consensus 150 ~~~~~l~~~~i~~~~~l~VgD-~~~di~~A~~aG~~~i~v~ 189 (221)
T d1o08a_ 150 IFIAAAHAVGVAPSESIGLED-SQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEES-SHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHcCCCCceEEEEec-CHHHHHHHHHcCCEEEEEC
Confidence 122333333 456899999 9999999999987 34444
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=89.18 E-value=0.31 Score=49.41 Aligned_cols=39 Identities=8% Similarity=0.081 Sum_probs=28.8
Q ss_pred cchHHHHHHHHHcCCEEEEecCCc---HHHHHHHHHHcCCCC
Q 043360 705 EEIKSTVEALRNAGVRIILVSEDE---LLAVTEVACELGNFR 743 (1108)
Q Consensus 705 ~~v~~aI~~l~~aGI~v~mlTGD~---~~tA~~IA~~~GI~~ 743 (1108)
|++.++|+.|+++|++++.+|+.. .....+.-+++|+..
T Consensus 22 ~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccc
Confidence 578999999999999999999544 333434345678754
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=87.62 E-value=0.46 Score=48.14 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=25.4
Q ss_pred cchHHHHHHHHHcCCEEEEecCCcHHHHHHHHH
Q 043360 705 EEIKSTVEALRNAGVRIILVSEDELLAVTEVAC 737 (1108)
Q Consensus 705 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~ 737 (1108)
|++.++|+.|+++|++++.+|.....+...+++
T Consensus 21 ~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~ 53 (253)
T d1wvia_ 21 PAGEDFVKRLQERQLPYILVTNNTTRTPEMVQE 53 (253)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHH
Confidence 678999999999999999999754444444443
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=86.94 E-value=0.48 Score=47.07 Aligned_cols=122 Identities=15% Similarity=0.164 Sum_probs=77.2
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhhHH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADDKL 783 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~K~ 783 (1108)
.+++.+++++|+ ++++.++|..+...+...-+..|+... -..++.+.+.... .=.|+-=.
T Consensus 95 ~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~--fd~v~~s~~~~~~----------------KP~p~~f~ 154 (245)
T d1qq5a_ 95 YPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS--FDAVISVDAKRVF----------------KPHPDSYA 154 (245)
T ss_dssp CTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG--CSEEEEGGGGTCC----------------TTSHHHHH
T ss_pred chhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccc--ccccccccccccc----------------CccHHHHH
Confidence 678888888775 788999999999999998888888753 3344444443211 11121112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccEe-cCCCccHH-------------------------HHhccchhhcc
Q 043360 784 LLVQSVKEKGHVVAFFGGSSTRDTPALKEADVGIT-EENKCTEM-------------------------ARECSDIVISA 837 (1108)
Q Consensus 784 ~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdVGIa-mg~~gte~-------------------------ak~aADivl~~ 837 (1108)
.+++.+.-.-+.++|||| ..+|+.+=++|++--. +...|.+. .....|+++.+
T Consensus 155 ~a~~~lg~~p~e~l~VgD-~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~ 233 (245)
T d1qq5a_ 155 LVEEVLGVTPAEVLFVSS-NGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPA 233 (245)
T ss_dssp HHHHHHCCCGGGEEEEES-CHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESS
T ss_pred HHHHHhCCChhhEEEEeC-CHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECC
Confidence 222333222346999999 8999999888886422 22112111 01247899889
Q ss_pred cccHHHHHH
Q 043360 838 VGSLLPILK 846 (1108)
Q Consensus 838 f~~I~~li~ 846 (1108)
+..|+.+|+
T Consensus 234 l~el~~lv~ 242 (245)
T d1qq5a_ 234 LGDLPRLVR 242 (245)
T ss_dssp GGGHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=84.72 E-value=0.63 Score=45.55 Aligned_cols=122 Identities=11% Similarity=0.087 Sum_probs=75.5
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHHHHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCHhh--
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLADD-- 781 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP~~-- 781 (1108)
.|++.+.++.|+ .+..++|+-....+..+-+.+|+... ....+..+.... ..+..|.-
T Consensus 87 ~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~-f~~~~~~~~~~~----------------~~~~KP~~~~ 146 (222)
T d2fdra1 87 IDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPY-FAPHIYSAKDLG----------------ADRVKPKPDI 146 (222)
T ss_dssp CTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGG-TTTCEEEHHHHC----------------TTCCTTSSHH
T ss_pred hhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccc-cceeeccccccc----------------ccccccCHHH
Confidence 678777777665 45678999999999999999999753 112222222211 11223322
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc---cEecCCCc-----cHHHHhccchhhcccccHHHHHH
Q 043360 782 KLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADV---GITEENKC-----TEMARECSDIVISAVGSLLPILK 846 (1108)
Q Consensus 782 K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV---GIamg~~g-----te~ak~aADivl~~f~~I~~li~ 846 (1108)
=....+.+.-..+.++|||| ..+|+.+-+.|++ |++-|... .+....-+|+++.+++.|..++.
T Consensus 147 ~~~~~~~l~~~p~~~l~vgD-s~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll~ 218 (222)
T d2fdra1 147 FLHGAAQFGVSPDRVVVVED-SVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHTCCGGGEEEEES-SHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHHH
T ss_pred HHHHHHhhCCCCceEEEEcC-CHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHHH
Confidence 12233333323467999999 9999999999996 34323111 11123348999998888877663
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=83.10 E-value=0.4 Score=47.63 Aligned_cols=23 Identities=17% Similarity=0.514 Sum_probs=21.9
Q ss_pred ccchHHHHHHHHHcCCEEEEecC
Q 043360 704 REEIKSTVEALRNAGVRIILVSE 726 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTG 726 (1108)
-|++.++++.|+++|+++.++|-
T Consensus 50 ~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 50 RPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CGGGHHHHHHHHHHTCCEEEEEE
T ss_pred cccHHHHHHHHHhhCCeEEEecc
Confidence 79999999999999999999994
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.50 E-value=0.59 Score=45.22 Aligned_cols=98 Identities=13% Similarity=0.065 Sum_probs=57.1
Q ss_pred ccchHHHHHHHHHcCCEEEEecCCcHHHHH----HHHHHcCCCCCCCCccccchhhhhhcCHHHHHHHhcccceecccCH
Q 043360 704 REEIKSTVEALRNAGVRIILVSEDELLAVT----EVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 779 (1108)
Q Consensus 704 r~~v~~aI~~l~~aGI~v~mlTGD~~~tA~----~IA~~~GI~~~~~~~~vi~G~~l~~l~~~~~~~~~~~~~V~ar~sP 779 (1108)
.+++.+.++.|++.|+++.++|......+. ..-...++... -+.++.+.+.. ...-.|
T Consensus 101 ~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~--fd~i~~s~~~~----------------~~KP~~ 162 (225)
T d1zd3a1 101 NRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH--FDFLIESCQVG----------------MVKPEP 162 (225)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT--SSEEEEHHHHT----------------CCTTCH
T ss_pred CccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh--ccEEEeccccc----------------cchhHH
Confidence 899999999999999999999975433222 22222333221 12223322211 111122
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-cEecC
Q 043360 780 DDKLLLVQSVKEKGHVVAFFGGSSTRDTPALKEADV-GITEE 820 (1108)
Q Consensus 780 ~~K~~iV~~lq~~g~~Va~iGD~G~ND~~aLk~AdV-GIamg 820 (1108)
+-=..+++.+.-....++|||| ...|+.+-++|++ +|.+.
T Consensus 163 ~~~~~~~~~~~~~p~e~l~VgD-~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 163 QIYKFLLDTLKASPSEVVFLDD-IGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp HHHHHHHHHHTCCGGGEEEEES-CHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHhhhcccCccceeEEec-CHHHHHHHHHcCCEEEEEC
Confidence 2222333333323356889999 8999999999998 55554
|