Citrus Sinensis ID: 043385
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 405 | 2.2.26 [Sep-21-2011] | |||||||
| Q8H124 | 280 | Uncharacterized protein A | no | no | 0.367 | 0.532 | 0.308 | 4e-08 | |
| P48279 | 321 | Uncharacterized protein y | N/A | no | 0.543 | 0.685 | 0.223 | 4e-07 | |
| Q8H0U5 | 641 | Protein TIC 62, chloropla | no | no | 0.432 | 0.273 | 0.29 | 4e-07 | |
| Q8SKU2 | 534 | Protein TIC 62, chloropla | N/A | no | 0.540 | 0.410 | 0.271 | 2e-06 | |
| P49534 | 319 | Uncharacterized protein y | N/A | no | 0.560 | 0.711 | 0.224 | 3e-05 | |
| P52579 | 310 | Isoflavone reductase homo | N/A | no | 0.2 | 0.261 | 0.329 | 8e-05 | |
| Q9P5L2 | 242 | Protein fmp-52, mitochond | N/A | no | 0.461 | 0.772 | 0.239 | 0.0001 | |
| P52577 | 310 | Isoflavone reductase homo | no | no | 0.190 | 0.248 | 0.344 | 0.0002 | |
| Q54L85 | 328 | Sterol-4-alpha-carboxylat | yes | no | 0.217 | 0.268 | 0.262 | 0.0005 | |
| P51238 | 319 | Uncharacterized protein y | N/A | no | 0.535 | 0.680 | 0.202 | 0.0009 |
| >sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 29/178 (16%)
Query: 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS 143
K + V G+TG GK +VE+L+SRGF V K+G+R + + + +
Sbjct: 45 KTKKVFVAGATGQTGKRIVEQLLSRGFAV------KAGVRDVEKAKTSFKDDPSLQIVRA 98
Query: 144 DVTNLESLEKSLENLGTSIDVVVSCLASRSG-GVKDSWKIDYEANRNSLVAGRNCGASHF 202
DVT E +K E +G V+ R G + WK+D N + A R G F
Sbjct: 99 DVT--EGPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKF 156
Query: 203 VLLSAICVQ--------KPLLEFQR-------AKLKFEAEMMKVAEEDSGFTYSIVRP 245
VL+S+I V P F AKL+ E + K SG Y+IVRP
Sbjct: 157 VLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKK-----SGINYTIVRP 209
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Arabidopsis thaliana (taxid: 3702) |
| >sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
++ILV+G+TG +G+ +V + G+ V + RN ++ + GA + + D+
Sbjct: 1 MSILVIGATGTLGRQIVRSALDEGYQVRCLV--------RNLRKAAFLKEWGAKLIWGDL 52
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205
+ ESL +L T I V++ SR +++D + + + A + F+
Sbjct: 53 SQPESLLPAL----TGIRVIIDTSTSRPTDPAGVYQVDLKGKKALIDAAKAMKIEKFIFF 108
Query: 206 SAICVQK----PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVEL-VK 260
S + +K PL+ + E++K +SG Y+I + FF+ L GQ + +
Sbjct: 109 SILNSEKYSQVPLMRIKTVT----EELLK----ESGLNYTIFKLCGFFQGLIGQYAVPIL 160
Query: 261 EGKPYVMFGDGKLCAY-------------CVLSEDKINQILPIGGPGKALTPLEQGEILF 307
+ + + + AY VL E N++ P+ G ++ + ++
Sbjct: 161 DQQTVWITTESTSIAYMDTIDIARFTLRSLVLKETN-NRVFPLVGT-RSWNSADIIQLCE 218
Query: 308 RLLGKEPKFLKVPIGIMDFA 327
RL G+ K +VPI ++ A
Sbjct: 219 RLSGQNAKVTRVPIAFLELA 238
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Cyanophora paradoxa (taxid: 2762) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 25/200 (12%)
Query: 64 PITASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR--EKSG 121
PI AS+ V + + N +D+ + V G+TG +G V EL+ GF V A R +++G
Sbjct: 61 PIRASSVVTEASPTNLNSKEEDL-VFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAG 119
Query: 122 IRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLEN-------LGTSIDVVVSCLASRSG 174
++ KE +LQ V LE +E LE LG + V++ C+ +
Sbjct: 120 SLVQSVKE---MKLQNTDEGTQPVEKLEIVECDLEKKDSIQPALGNA-SVIICCIGASEK 175
Query: 175 GVKD---SWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMM-- 229
+ D ++IDY A +N + A + ++F+L++++ K F A L ++
Sbjct: 176 EISDITGPYRIDYLATKNLVDAATSAKVNNFILVTSLGTNK--FGFPAAILNLFWGVLCW 233
Query: 230 -KVAEE---DSGFTYSIVRP 245
+ AEE +SG Y+IVRP
Sbjct: 234 KRKAEEALIESGLNYAIVRP 253
|
Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 112/265 (42%), Gaps = 46/265 (17%)
Query: 84 KDINIL-VVGSTGYIGKFVVEELVSRGFNVIAIAR--EKSGIRGRNDKEETLNQLQGASV 140
KD N++ V G+TG +G V EL+ GF V A R +K+G ++ K+ +L GAS
Sbjct: 86 KDDNLVFVAGATGKVGSRTVRELIKLGFKVRAGVRNAQKAGALVQSVKQL---KLDGASG 142
Query: 141 CFSDVTNLESLEKSLEN-------LGTSIDVVVSCLASRSG--GVKDSWKIDYEANRNSL 191
V LE +E LE LG + V+ + AS + +IDY A +N +
Sbjct: 143 GGEAVEKLEIVECDLEKADQIGSALGNASTVICAIGASEKEIFDITGPCRIDYRATKNLV 202
Query: 192 VAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEED----SGFTYSIV---- 243
A +HF+L++++ K L L + + K E+ SG Y+IV
Sbjct: 203 DAATVAKVNHFILVTSLGTNKFGLPAAILNLFWGVLIWKRKAEEALLASGIPYTIVRPGG 262
Query: 244 --RPTAFFKS------------LGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILP 289
RPT +K GGQV ++ + + +YC + E P
Sbjct: 263 MERPTDAYKETHNVTLSTEDTLFGGQVSNLQVAELMAIMAKNPDLSYCKIVEVIAETTAP 322
Query: 290 IGGPGKALTPLEQGEILFRLLGKEP 314
LTP E+ +L R+ + P
Sbjct: 323 -------LTPAEK--LLTRIPSQRP 338
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Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids. Pisum sativum (taxid: 3888) |
| >sp|P49534|YCF39_ODOSI Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 40/267 (14%)
Query: 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
+++L++G TG +G+ VV + +++G+ V + R R N +E GA + + D+
Sbjct: 1 MSLLIIGGTGTLGRQVVLQALTKGYQVRCLVR---NFRKANFLKE-----WGAELIYGDL 52
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205
+ E++ L+ + ID SR + ++D++ + A + HFV
Sbjct: 53 SRPETIPPCLQGITAVIDTS----TSRPSDLDTLKQVDWDGKCALIEAAQAANVKHFVFC 108
Query: 206 SAICVQK----PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVEL-VK 260
S+ V++ PL+E +KF E + S Y++ R F++ L Q + V
Sbjct: 109 SSQNVEQFLNIPLME-----MKFGIE---TKLQQSNIPYTVFRLAGFYQGLIEQYAIPVL 160
Query: 261 EGKPYVMFGDGKLCAY---------CV----LSEDKINQILPIGGPGKALTPLEQGEILF 307
E P ++ + +Y C+ L E K N+ +GG K E +
Sbjct: 161 ENLPILVTNENTCVSYMDTQDIAKFCLRSLQLPETK-NRTFVLGGQ-KGWVSSEIINLCE 218
Query: 308 RLLGKEPKFLKVPIGIMDFAIGVLDFL 334
+L G+ K K+P+ ++ + F
Sbjct: 219 QLAGQSAKVNKIPLFLLKLVSQIFGFF 245
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Odontella sinensis (taxid: 2839) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1 | Back alignment and function description |
|---|
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
IL++G TGYIGK++VE G A+ RE + K + G ++ F D++N
Sbjct: 9 ILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFGDISN 68
Query: 148 LESLEKSLENLGTSIDVVVSCLASR 172
ESL K+++ +DVV+S + +
Sbjct: 69 QESLLKAIKQ----VDVVISTVGGQ 89
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Nicotiana tabacum (taxid: 4097) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q9P5L2|FMP52_NEUCR Protein fmp-52, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fmp-52 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 43/230 (18%)
Query: 90 VVGSTGYIGKFVVEELVSR---GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
++GSTG +G ++ L++ V I+R R T N + + +D +
Sbjct: 11 LIGSTGLVGSHILSTLLTSPTTSSQVQTISR-------RAPANPT-NSSRLSPTVNADTS 62
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
+L SL L T++ + +GG+ + WKID++ N + A + G +FV +S
Sbjct: 63 TWPTLLSSLVPLPTTVISSLGTTRVAAGGIANQWKIDHDLNVDLAKAAKQAGVKNFVFIS 122
Query: 207 ------AICVQKPLLEFQRA------KLKFE-----------AEMMKVAEEDSGFTYSIV 243
A+ + P + +R L FE E K G Y +V
Sbjct: 123 SAGTRGALSTKVPYSQMKRGVEDTIQSLDFEHGIILRPGLILGEREKAQHAGQGLLYGLV 182
Query: 244 RPTAFFKSLGGQVELVKEG--------KPYVMFGDGKLCA-YCVLSEDKI 284
R + SLG Q +E K M +GK + VL +D+I
Sbjct: 183 RGLGRWVSLGVQDRFAQEAEVIARAAVKAAKMAEEGKAPGKWWVLEQDEI 232
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Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110) |
| >sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS---GIRGRNDKEETLNQLQGASVCFSD 144
ILV+G TGYIGKF+VE G + A+ RE + ++G+ ++ L G ++ D
Sbjct: 8 ILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKT--VQSFKDL-GVTILHGD 64
Query: 145 VTNLESLEKSLENLGTSIDVVVSCLAS 171
+ + ESL K+++ +DVV+S + S
Sbjct: 65 LNDHESLVKAIKQ----VDVVISTVGS 87
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q54L85|NSDHL_DICDI Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating OS=Dictyostelium discoideum GN=nsdhl PE=3 SV=1 | Back alignment and function description |
|---|
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 60/103 (58%), Gaps = 15/103 (14%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
N+ + G +G++GK+++EEL+S G+ V A++R ++ + L+Q+ GA+ S +
Sbjct: 3 NVFLTGGSGFLGKYIIEELISNGYKVFALSRSETS-------NKVLSQM-GATPVMSSLH 54
Query: 147 NLESLEKSLENLGTSIDVVVSC---LASRSGGVKDSWKIDYEA 186
+ + L ++++ D+V+ C L + S V++ +K + +A
Sbjct: 55 DEQGLTEAIK----GCDIVIHCAAKLETNSESVQELYKDNIDA 93
|
Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 0 |
| >sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 108/257 (42%), Gaps = 40/257 (15%)
Query: 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
+ +LV+G+TG +G+ +V + G+NV + RN ++ + GA + + D+
Sbjct: 1 MTLLVIGATGTLGRQIVRRALDEGYNVKCMV--------RNLRKSAFLKEWGAELVYGDL 52
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205
ES+ +S + V+ SR ++ +ID + + A + F+
Sbjct: 53 KLPESILQSF----CGVTAVIDASTSRPSDPYNTEQIDLDGKIALIEAAKAAKVQRFIFF 108
Query: 206 SAICVQK----PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQ------ 255
S + + PL+ + + + + S +Y++ FF+ L Q
Sbjct: 109 SILNADQYPKVPLMNLKSQVVNY--------LQKSSISYTVFSLGGFFQGLISQYAIPIL 160
Query: 256 ----VELVKEGKPYVMFGDGKLCAYCVLSEDKI----NQILPIGGPGKALTPLEQGEILF 307
V + E P + + D + A V+ + N+ILP+ G KA T E +
Sbjct: 161 DKKSVWVTGESTP-IAYIDTQDAAKLVIKSLGVPSTENRILPLVG-NKAWTSAEIITLCE 218
Query: 308 RLLGKEPKFLKVPIGIM 324
+L G++ + ++P+ ++
Sbjct: 219 KLSGQKTQISQIPLSLL 235
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Porphyra purpurea (taxid: 2787) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 405 | ||||||
| 224100353 | 418 | predicted protein [Populus trichocarpa] | 0.992 | 0.961 | 0.781 | 0.0 | |
| 225432378 | 456 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.881 | 0.761 | 1e-177 | |
| 449432799 | 419 | PREDICTED: uncharacterized protein LOC10 | 0.970 | 0.937 | 0.752 | 1e-172 | |
| 356549063 | 412 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.961 | 0.743 | 1e-172 | |
| 449495391 | 467 | PREDICTED: uncharacterized LOC101218189 | 0.970 | 0.841 | 0.752 | 1e-171 | |
| 356555557 | 412 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.961 | 0.738 | 1e-171 | |
| 297812049 | 417 | pale-green and chlorophyll B reduced 2 [ | 0.980 | 0.952 | 0.723 | 1e-169 | |
| 15239530 | 417 | Rossmann-fold NAD(P)-binding domain-cont | 0.980 | 0.952 | 0.719 | 1e-168 | |
| 21553818 | 417 | unknown [Arabidopsis thaliana] | 0.980 | 0.952 | 0.716 | 1e-167 | |
| 26449404 | 417 | unknown protein [Arabidopsis thaliana] | 0.980 | 0.952 | 0.716 | 1e-167 |
| >gi|224100353|ref|XP_002311844.1| predicted protein [Populus trichocarpa] gi|222851664|gb|EEE89211.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/421 (78%), Positives = 359/421 (85%), Gaps = 19/421 (4%)
Query: 1 MSLGFSFNMFSIQSPKSQILSRTRLSSQFINQTQVKSAPYTLSDYHVNSSQPFKLSTSSK 60
MSL FS N+ S+ SPK Q + SQFINQ QV S ++L + +NSS PFK S K
Sbjct: 1 MSLCFSCNVSSLNSPKYQS-HKAHFYSQFINQIQVNSLSHSLPSFPLNSSLPFKFSV--K 57
Query: 61 RFNPITASTA--VEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE 118
R NPI +STA VEAT SSFRNKNPKDINILV GSTGYIGKFVV+ELV+RGFNVIA+ARE
Sbjct: 58 RINPIRSSTATSVEATQSSFRNKNPKDINILVAGSTGYIGKFVVKELVNRGFNVIAVARE 117
Query: 119 KSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKD 178
KSGIRG+N +EETLNQLQGA+VCFSDVT LE+LEKSL + G S+DVVVSCLASR+GGVKD
Sbjct: 118 KSGIRGKNSEEETLNQLQGANVCFSDVTKLETLEKSLNDFGVSVDVVVSCLASRTGGVKD 177
Query: 179 SWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGF 238
SWKIDYEA +NSLVAG+ GA HFVLLSAICVQKPLLEFQRAKLKFE+E+M+ E DSGF
Sbjct: 178 SWKIDYEATKNSLVAGKKLGAKHFVLLSAICVQKPLLEFQRAKLKFESELMRETEMDSGF 237
Query: 239 TYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAY--------------CVLSEDKI 284
TYSIVRPTAFFKSLGGQVELVK+GKPYVMFGDG LCA CVL EDKI
Sbjct: 238 TYSIVRPTAFFKSLGGQVELVKDGKPYVMFGDGNLCACKPISEEDLASFIADCVLGEDKI 297
Query: 285 NQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDA 344
NQILPIGGPGKALTPLEQGE+LFRLLGKEP FLKVPIGIMDFAIGVLDFLVKIFPS+EDA
Sbjct: 298 NQILPIGGPGKALTPLEQGEMLFRLLGKEPNFLKVPIGIMDFAIGVLDFLVKIFPSMEDA 357
Query: 345 AEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQTI 404
AEFGKIGRYYAAESML+LDPETGEYSAE+TPSYG+DTLE FFE+VLREGMAGQELGEQ I
Sbjct: 358 AEFGKIGRYYAAESMLVLDPETGEYSAERTPSYGEDTLEVFFEKVLREGMAGQELGEQAI 417
Query: 405 F 405
F
Sbjct: 418 F 418
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432378|ref|XP_002276628.1| PREDICTED: uncharacterized protein LOC100244223 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 320/420 (76%), Positives = 353/420 (84%), Gaps = 18/420 (4%)
Query: 1 MSLGFSFNMFSIQSPKSQILSRTRLSSQFINQTQVKSAPYTLSDYHVNSSQPFKLSTSSK 60
MSL S N+ ++ SPK++ R +SQFINQ QV APY ++ ++ SQ K S +
Sbjct: 40 MSLYLSSNVLTLHSPKTRSF-RNCSASQFINQNQVTPAPYAITRLPLSLSQSPKFS--RE 96
Query: 61 RFNPITAS-TAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK 119
RF PITAS T SSFR KN +IN++VVGSTGYIGKFVV+ELVSRGFNVIAIARE+
Sbjct: 97 RFLPITASITPTVEPPSSFRGKNASEINVVVVGSTGYIGKFVVKELVSRGFNVIAIARER 156
Query: 120 SGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDS 179
SGIRGRN KE+TL +L GA+V FSDVT+L+ LEKSLENLG IDVVVSCLASR+GGVKDS
Sbjct: 157 SGIRGRNRKEDTLTELNGANVWFSDVTSLDVLEKSLENLGLPIDVVVSCLASRTGGVKDS 216
Query: 180 WKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFT 239
WKIDYEA +NSLVAGR GASHFVLLSA+CVQKPLLEFQRAKLKFEAE+MK AEED GFT
Sbjct: 217 WKIDYEATKNSLVAGRKRGASHFVLLSAVCVQKPLLEFQRAKLKFEAELMKEAEEDDGFT 276
Query: 240 YSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAY--------------CVLSEDKIN 285
YSIVRPTAFFKSLGGQVELVK+GKPYVMFGDGKLCA CVL +DKIN
Sbjct: 277 YSIVRPTAFFKSLGGQVELVKDGKPYVMFGDGKLCACKPISEQDLASFIADCVLEKDKIN 336
Query: 286 QILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAA 345
Q+LPIGGPGKALTPLEQGE+LFRL G++P FLKVPIGIMDFAIG LDFLVKIFPS+EDAA
Sbjct: 337 QVLPIGGPGKALTPLEQGEMLFRLAGRKPNFLKVPIGIMDFAIGFLDFLVKIFPSMEDAA 396
Query: 346 EFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQTIF 405
EFGKIGRYYAAESML+LDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQTIF
Sbjct: 397 EFGKIGRYYAAESMLVLDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQTIF 456
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449432799|ref|XP_004134186.1| PREDICTED: uncharacterized protein LOC101218189 [Cucumis sativus] gi|404160691|gb|AFR53113.1| divinyl reductase [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 310/412 (75%), Positives = 346/412 (83%), Gaps = 19/412 (4%)
Query: 10 FSIQSPKSQILSRTRLSSQFINQTQVKSAPYTLSDYHVNSSQPFKLSTSSKRFNPITAST 69
++ SP + S TRLSS F++Q V S ++ + SQ K S +R NPI S+
Sbjct: 11 LNLHSPANATNS-TRLSSNFVHQIPVSSFSFSFQSSSLRLSQTPKFS--RQRRNPIVVSS 67
Query: 70 A--VEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRND 127
VE+T SSFR KNPKD NILVVGSTGYIG FVV+ELVSRGFNVIAIAREKSGI+GRN
Sbjct: 68 TPVVESTKSSFRAKNPKDTNILVVGSTGYIGNFVVKELVSRGFNVIAIAREKSGIKGRNS 127
Query: 128 KEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEAN 187
KE+ +QL+GA+VCFSDV++L+ LEKSL +L IDVVVSCLASR+GG+KDSWKIDYEA
Sbjct: 128 KEQASDQLKGANVCFSDVSHLDVLEKSLGDLDVPIDVVVSCLASRTGGIKDSWKIDYEAT 187
Query: 188 RNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTA 247
+NSLVAGRN GASHFVLLSAICVQKPLLEFQRAKLKFEAE+M+ A+EDSGFTYSIVRPTA
Sbjct: 188 KNSLVAGRNRGASHFVLLSAICVQKPLLEFQRAKLKFEAELMEAAKEDSGFTYSIVRPTA 247
Query: 248 FFKSLGGQVELVKEGKPYVMFGDGKLCAY--------------CVLSEDKINQILPIGGP 293
FFKSLGGQVELVK+GKPYVMFGDGKLCA CVLSEDKINQ+LPIGGP
Sbjct: 248 FFKSLGGQVELVKDGKPYVMFGDGKLCACKPISEQDLASFIADCVLSEDKINQVLPIGGP 307
Query: 294 GKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRY 353
GKALTPLEQGEILFRLLGKEP F KVPIGIMDFAIGVLDFLVK FP++EDAAE+GKIGRY
Sbjct: 308 GKALTPLEQGEILFRLLGKEPNFFKVPIGIMDFAIGVLDFLVKFFPAMEDAAEYGKIGRY 367
Query: 354 YAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQTIF 405
YAAESMLILDPETGEYSA+KTPSYGKDTLE+FFERVL EGMAGQELGEQ++F
Sbjct: 368 YAAESMLILDPETGEYSADKTPSYGKDTLEDFFERVLSEGMAGQELGEQSVF 419
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356549063|ref|XP_003542917.1| PREDICTED: uncharacterized protein LOC100780482 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 313/421 (74%), Positives = 343/421 (81%), Gaps = 25/421 (5%)
Query: 1 MSLGFSFNMFSIQSPKSQILSRTRLSS-QFINQTQVKSAPYTLSDYHVNSSQPFKLSTSS 59
MSL ++ N S+ KS L+ + SS FIN VK P K +
Sbjct: 1 MSLCYTSNFISLNHKKSLSLTFSSESSPHFINLFPVKPK---------KPHHPIKFTAER 51
Query: 60 -KRFNPITASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE 118
K F +T S VE T SS+R K+PKD+N+LVVGSTGYIGKFVV ELV RGF+V AIARE
Sbjct: 52 FKLFASLTPSPPVETTPSSYRCKSPKDVNVLVVGSTGYIGKFVVRELVKRGFDVTAIARE 111
Query: 119 KSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKD 178
+SGI+G DK++TLNQL+GA+VCFSDVTNL++ E+SL +LG S DVVVSCLASR+GGVKD
Sbjct: 112 RSGIKGSVDKDQTLNQLRGANVCFSDVTNLDAFEESLNSLGKSFDVVVSCLASRNGGVKD 171
Query: 179 SWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGF 238
SWKIDYEA RNSLVAGR GASHFVLLSAICVQKPLLEFQRAKLKFEAE+MK+AEED GF
Sbjct: 172 SWKIDYEATRNSLVAGRKRGASHFVLLSAICVQKPLLEFQRAKLKFEAELMKLAEEDDGF 231
Query: 239 TYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAY--------------CVLSEDKI 284
TYSIVRPTAFFKSLGGQVELVK+GKPYVMFGDGKLCA CVLSEDKI
Sbjct: 232 TYSIVRPTAFFKSLGGQVELVKDGKPYVMFGDGKLCACKPMSESDLASFIVNCVLSEDKI 291
Query: 285 NQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDA 344
NQ+LPIGGPGKALTPLEQGE+LFRLLGKEPKFLKVPI IMDFAIGVLDFLVK+FPSLEDA
Sbjct: 292 NQVLPIGGPGKALTPLEQGEMLFRLLGKEPKFLKVPIEIMDFAIGVLDFLVKVFPSLEDA 351
Query: 345 AEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQTI 404
AEFGKIGRYYAAESML+LDPETGEYSAEKTPSYG DTLEEFF RVLREGMAGQELGEQTI
Sbjct: 352 AEFGKIGRYYAAESMLLLDPETGEYSAEKTPSYGNDTLEEFFARVLREGMAGQELGEQTI 411
Query: 405 F 405
F
Sbjct: 412 F 412
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449495391|ref|XP_004159826.1| PREDICTED: uncharacterized LOC101218189 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 310/412 (75%), Positives = 346/412 (83%), Gaps = 19/412 (4%)
Query: 10 FSIQSPKSQILSRTRLSSQFINQTQVKSAPYTLSDYHVNSSQPFKLSTSSKRFNPITAST 69
++ SP + S TRLSS F++Q V S ++ + SQ K S +R NPI S+
Sbjct: 11 LNLHSPANATNS-TRLSSNFVHQIPVSSFSFSFQSSSLRLSQTPKFS--RQRRNPIVVSS 67
Query: 70 A--VEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRND 127
VE+T SSFR KNPKD NILVVGSTGYIG FVV+ELVSRGFNVIAIAREKSGI+GRN
Sbjct: 68 TPVVESTKSSFRAKNPKDTNILVVGSTGYIGNFVVKELVSRGFNVIAIAREKSGIKGRNS 127
Query: 128 KEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEAN 187
KE+ +QL+GA+VCFSDV++L+ LEKSL +L IDVVVSCLASR+GG+KDSWKIDYEA
Sbjct: 128 KEQASDQLKGANVCFSDVSHLDVLEKSLGDLDVPIDVVVSCLASRTGGIKDSWKIDYEAT 187
Query: 188 RNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTA 247
+NSLVAGRN GASHFVLLSAICVQKPLLEFQRAKLKFEAE+M+ A+EDSGFTYSIVRPTA
Sbjct: 188 KNSLVAGRNRGASHFVLLSAICVQKPLLEFQRAKLKFEAELMEAAKEDSGFTYSIVRPTA 247
Query: 248 FFKSLGGQVELVKEGKPYVMFGDGKLCAY--------------CVLSEDKINQILPIGGP 293
FFKSLGGQVELVK+GKPYVMFGDGKLCA CVLSEDKINQ+LPIGGP
Sbjct: 248 FFKSLGGQVELVKDGKPYVMFGDGKLCACKPISEQDLASFIADCVLSEDKINQVLPIGGP 307
Query: 294 GKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRY 353
GKALTPLEQGEILFRLLGKEP F KVPIGIMDFAIGVLDFLVK FP++EDAAE+GKIGRY
Sbjct: 308 GKALTPLEQGEILFRLLGKEPNFFKVPIGIMDFAIGVLDFLVKFFPAMEDAAEYGKIGRY 367
Query: 354 YAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQTIF 405
YAAESMLILDPETGEYSA+KTPSYGKDTLE+FFERVL EGMAGQELGEQ++F
Sbjct: 368 YAAESMLILDPETGEYSADKTPSYGKDTLEDFFERVLSEGMAGQELGEQSVF 419
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555557|ref|XP_003546097.1| PREDICTED: uncharacterized protein LOC100813325 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 605 bits (1561), Expect = e-171, Method: Compositional matrix adjust.
Identities = 311/421 (73%), Positives = 343/421 (81%), Gaps = 25/421 (5%)
Query: 1 MSLGFSFNMFSIQSPKSQILSRTRLSS-QFINQTQVKSAPYTLSDYHVNSSQPFKLSTSS 59
MSL ++ N S+ KS L+ + SS FIN VK P K +
Sbjct: 1 MSLCYTSNFISLNHQKSFSLTFSSESSPHFINLFPVKPQ---------KPHHPIKFTAER 51
Query: 60 -KRFNPITASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE 118
K F +T+S +VE + SS+R+K+PKD+N+LVVGSTGYIGKFVV ELV RGFNV AIARE
Sbjct: 52 FKLFASLTSSPSVETSPSSYRSKSPKDVNVLVVGSTGYIGKFVVRELVKRGFNVTAIARE 111
Query: 119 KSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKD 178
+SGI+G DK++TL QL+GA+VCFSDVTNL+ E+SL LG S DVVVSCLASR+GGVKD
Sbjct: 112 RSGIKGSVDKDQTLGQLRGANVCFSDVTNLDVFEESLNRLGKSFDVVVSCLASRNGGVKD 171
Query: 179 SWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGF 238
SWKIDYEA RNSLVAGR GASHFVLLSAICVQKPLLEFQRAKLKFE E++K+AEED GF
Sbjct: 172 SWKIDYEATRNSLVAGRKRGASHFVLLSAICVQKPLLEFQRAKLKFEDELVKLAEEDGGF 231
Query: 239 TYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAY--------------CVLSEDKI 284
TYSIVRPTAFFKSLGGQVELVK+GKPYVMFGDGKLCA CVLSEDKI
Sbjct: 232 TYSIVRPTAFFKSLGGQVELVKDGKPYVMFGDGKLCACKPISESDLASFIVDCVLSEDKI 291
Query: 285 NQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDA 344
NQ+LPIGGPGKALTPLEQGE+LFRLLGKEPKFLKVPIGIMDFAIGVLDFLVK+FPSLEDA
Sbjct: 292 NQVLPIGGPGKALTPLEQGEMLFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKVFPSLEDA 351
Query: 345 AEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQTI 404
AEFGKIGRYYAAESML+LDPETGEYSAEKTPSYG DTLEEFF RVLREGMAGQELGEQTI
Sbjct: 352 AEFGKIGRYYAAESMLLLDPETGEYSAEKTPSYGNDTLEEFFARVLREGMAGQELGEQTI 411
Query: 405 F 405
F
Sbjct: 412 F 412
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297812049|ref|XP_002873908.1| pale-green and chlorophyll B reduced 2 [Arabidopsis lyrata subsp. lyrata] gi|297319745|gb|EFH50167.1| pale-green and chlorophyll B reduced 2 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 304/420 (72%), Positives = 348/420 (82%), Gaps = 23/420 (5%)
Query: 1 MSLGFSFNMFSIQSPKSQILSRTRLSSQFINQTQVKSAPYTLSDYHVNSSQPFKLSTSSK 60
MSL SFN+F+ SPK + + + S+FI+Q QVKS+P + SS+ K +
Sbjct: 1 MSLCSSFNVFASYSPKPKTIFK---DSKFISQFQVKSSPLASTFKTHESSETLKFKRA-- 55
Query: 61 RFNPITA---STAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR 117
R PI++ + AT+SSFRNK+PKDIN+LVVGSTGYIG+FVV+E++ RGFNVIA+AR
Sbjct: 56 RLKPISSLDSGISEIATSSSFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGFNVIAVAR 115
Query: 118 EKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVK 177
EKSGIRG+NDKEETL QLQGA+VCFSDVT L+ LEKS+ENLG IDVVVSCLASR+GG+K
Sbjct: 116 EKSGIRGKNDKEETLKQLQGANVCFSDVTELDVLEKSIENLGFGIDVVVSCLASRNGGIK 175
Query: 178 DSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEE-DS 236
DSWKIDYEA +NSLVAG+ GA HFVLLSAICVQKPLLEFQRAKLKFEAE+M +AEE DS
Sbjct: 176 DSWKIDYEATKNSLVAGKKFGAKHFVLLSAICVQKPLLEFQRAKLKFEAELMDLAEEQDS 235
Query: 237 GFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAY--------------CVLSED 282
FTYSIVRPTAFFKSLGGQVE+VK+GKPYVMFGDGKLCA CVL E+
Sbjct: 236 SFTYSIVRPTAFFKSLGGQVEIVKDGKPYVMFGDGKLCACKPISEQDLAAFIADCVLEEN 295
Query: 283 KINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLE 342
KINQ+LPIGGPGKALTPLEQGEILFR+LG+EPKFLKVPI IMDF IGVLD + KIFPS+
Sbjct: 296 KINQVLPIGGPGKALTPLEQGEILFRILGREPKFLKVPIEIMDFVIGVLDSIAKIFPSVG 355
Query: 343 DAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQ 402
+AAEFGKIGRYYAAESMLILDPETGEYS EKTPSYGKDTLE+FF +V+REGMAGQELGEQ
Sbjct: 356 EAAEFGKIGRYYAAESMLILDPETGEYSEEKTPSYGKDTLEDFFAKVIREGMAGQELGEQ 415
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15239530|ref|NP_197367.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|98961123|gb|ABF59045.1| At5g18660 [Arabidopsis thaliana] gi|332005212|gb|AED92595.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 302/420 (71%), Positives = 347/420 (82%), Gaps = 23/420 (5%)
Query: 1 MSLGFSFNMFSIQSPKSQILSRTRLSSQFINQTQVKSAPYTLSDYHVNSSQPFKLSTSSK 60
MSL SFN+F+ SPK + + + S+FI+Q QVKS+P S +H N S L
Sbjct: 1 MSLCSSFNVFASYSPKPKTIFK---DSKFISQFQVKSSPLA-STFHTNESST-SLKYKRA 55
Query: 61 RFNPITA---STAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR 117
R PI++ + AT+ SFRNK+PKDIN+LVVGSTGYIG+FVV+E++ RGFNVIA+AR
Sbjct: 56 RLKPISSLDSGISEIATSPSFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGFNVIAVAR 115
Query: 118 EKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVK 177
EKSGIRG+NDKEETL QLQGA+VCFSDVT L+ LEKS+ENLG +DVVVSCLASR+GG+K
Sbjct: 116 EKSGIRGKNDKEETLKQLQGANVCFSDVTELDVLEKSIENLGFGVDVVVSCLASRNGGIK 175
Query: 178 DSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAE-EDS 236
DSWKIDYEA +NSLVAG+ GA HFVLLSAICVQKPLLEFQRAKLKFEAE+M +AE +DS
Sbjct: 176 DSWKIDYEATKNSLVAGKKFGAKHFVLLSAICVQKPLLEFQRAKLKFEAELMDLAEQQDS 235
Query: 237 GFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAY--------------CVLSED 282
FTYSIVRPTAFFKSLGGQVE+VK+GKPYVMFGDGKLCA CVL E+
Sbjct: 236 SFTYSIVRPTAFFKSLGGQVEIVKDGKPYVMFGDGKLCACKPISEQDLAAFIADCVLEEN 295
Query: 283 KINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLE 342
KINQ+LPIGGPGKALTPLEQGEILF++LG+EPKFLKVPI IMDF IGVLD + KIFPS+
Sbjct: 296 KINQVLPIGGPGKALTPLEQGEILFKILGREPKFLKVPIEIMDFVIGVLDSIAKIFPSVG 355
Query: 343 DAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQ 402
+AAEFGKIGRYYAAESMLILDPETGEYS EKTPSYGKDTLE+FF +V+REGMAGQELGEQ
Sbjct: 356 EAAEFGKIGRYYAAESMLILDPETGEYSEEKTPSYGKDTLEDFFAKVIREGMAGQELGEQ 415
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21553818|gb|AAM62911.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 301/420 (71%), Positives = 346/420 (82%), Gaps = 23/420 (5%)
Query: 1 MSLGFSFNMFSIQSPKSQILSRTRLSSQFINQTQVKSAPYTLSDYHVNSSQPFKLSTSSK 60
MSL SFN+F+ SPK + + + S+FI+Q QVKS+P S +H N S L
Sbjct: 1 MSLCSSFNVFASYSPKPKTIFK---DSKFISQFQVKSSPLA-STFHTNESST-SLKYKRA 55
Query: 61 RFNPITA---STAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR 117
R PI++ + AT+ SFRNK+PKDIN+LVVGSTGYIG+FVV+E++ RGFNVIA+AR
Sbjct: 56 RLKPISSLDSGISEIATSPSFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGFNVIAVAR 115
Query: 118 EKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVK 177
EKSGIRG+NDKEETL QLQGA+VCFSDVT L+ LEKS+ENLG +DVVVSCLASR+GG+K
Sbjct: 116 EKSGIRGKNDKEETLKQLQGANVCFSDVTELDVLEKSIENLGFGVDVVVSCLASRNGGIK 175
Query: 178 DSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAE-EDS 236
DSWKIDYEA +NSLVAG+ GA HFVLLSAICVQKPLLEFQRAKLKFEAE+M +AE +DS
Sbjct: 176 DSWKIDYEATKNSLVAGKKFGAKHFVLLSAICVQKPLLEFQRAKLKFEAELMDLAEQQDS 235
Query: 237 GFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAY--------------CVLSED 282
FTYSIVRPTAFFKSLGGQVE+VK+GKPYVMFGDGKLCA CVL E+
Sbjct: 236 SFTYSIVRPTAFFKSLGGQVEIVKDGKPYVMFGDGKLCACKPISEQDLAAFIADCVLEEN 295
Query: 283 KINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLE 342
KINQ+LPIGGPGKALTPLEQGEILF++LG+EPKFLKVPI IMDF IGVLD + KIFPS+
Sbjct: 296 KINQVLPIGGPGKALTPLEQGEILFKILGREPKFLKVPIEIMDFVIGVLDSIAKIFPSVG 355
Query: 343 DAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQ 402
+AAEFGKIGRYYAAESMLILDPET EYS EKTPSYGKDTLE+FF +V+REGMAGQELGEQ
Sbjct: 356 EAAEFGKIGRYYAAESMLILDPETEEYSEEKTPSYGKDTLEDFFAKVIREGMAGQELGEQ 415
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|26449404|dbj|BAC41829.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 301/420 (71%), Positives = 346/420 (82%), Gaps = 23/420 (5%)
Query: 1 MSLGFSFNMFSIQSPKSQILSRTRLSSQFINQTQVKSAPYTLSDYHVNSSQPFKLSTSSK 60
MSL SFN+F+ SPK + + + S+FI+Q QVKS+P S +H N S L
Sbjct: 1 MSLCSSFNVFASYSPKPKTIFK---DSKFISQFQVKSSPLA-STFHTNESST-SLKYKRA 55
Query: 61 RFNPITA---STAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR 117
R PI++ + AT+ SFRNK+PKDIN+LVVGSTGYIG+FVV+E++ RGFNVIA+AR
Sbjct: 56 RLKPISSLDSGISEIATSPSFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGFNVIAVAR 115
Query: 118 EKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVK 177
EKSGIRG+NDKEETL QLQGA+VCFSDVT L+ LEKS+ENLG +DVVVSCLASR+GG+K
Sbjct: 116 EKSGIRGKNDKEETLKQLQGANVCFSDVTELDVLEKSIENLGFGVDVVVSCLASRNGGIK 175
Query: 178 DSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAE-EDS 236
DSWKIDYEA +NSLVAG+ GA HFVLLSAICVQKPLLEFQRAKLKFEAE+M +AE +DS
Sbjct: 176 DSWKIDYEATKNSLVAGKKFGAKHFVLLSAICVQKPLLEFQRAKLKFEAELMDLAEQQDS 235
Query: 237 GFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAY--------------CVLSED 282
FTYSIVRPTAFFKSLGGQVE+VK+GKPYVMFGDGKLCA CVL E+
Sbjct: 236 SFTYSIVRPTAFFKSLGGQVEIVKDGKPYVMFGDGKLCACKPISEQDLAAFIADCVLEEN 295
Query: 283 KINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLE 342
KINQ+LPIGGPGKALTPLEQGEILF++LG+EPKFLKVPI IMDF IGVLD + KIFPS+
Sbjct: 296 KINQVLPIGGPGKALTPLEQGEILFKILGREPKFLKVPIEIMDFVIGVLDSIAKIFPSVG 355
Query: 343 DAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQ 402
+AAEFGKIGRYYAAESMLILDPETG YS EKTPSYGKDTLE+FF +V+REGMAGQELGEQ
Sbjct: 356 EAAEFGKIGRYYAAESMLILDPETGGYSEEKTPSYGKDTLEDFFAKVIREGMAGQELGEQ 415
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 405 | ||||||
| TAIR|locus:2180019 | 417 | PCB2 "PALE-GREEN AND CHLOROPHY | 0.980 | 0.952 | 0.692 | 3.5e-146 | |
| UNIPROTKB|Q3Z6W4 | 302 | DET1324 "Putative uncharacteri | 0.540 | 0.725 | 0.226 | 0.00017 | |
| TIGR_CMR|DET_1324 | 302 | DET_1324 "conserved hypothetic | 0.540 | 0.725 | 0.226 | 0.00017 | |
| TAIR|locus:2040854 | 280 | AT2G34460 [Arabidopsis thalian | 0.380 | 0.55 | 0.283 | 0.00018 | |
| TIGR_CMR|GSU_0385 | 294 | GSU_0385 "NADH dehydrogenase s | 0.585 | 0.806 | 0.243 | 0.00034 | |
| TAIR|locus:2087901 | 641 | Tic62 "translocon at the inner | 0.471 | 0.297 | 0.252 | 0.00044 |
| TAIR|locus:2180019 PCB2 "PALE-GREEN AND CHLOROPHYLL B REDUCED 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1428 (507.7 bits), Expect = 3.5e-146, P = 3.5e-146
Identities = 291/420 (69%), Positives = 330/420 (78%)
Query: 1 MSLGFSFNMFSIQSPKSQILSRTRLSSQFINQTQVKSAPYTLSDYHVNSSQPFKLSTSSK 60
MSL SFN+F+ SPK + + + S+FI+Q QVKS+P S +H N S L
Sbjct: 1 MSLCSSFNVFASYSPKPKTIFK---DSKFISQFQVKSSPLA-STFHTNESST-SLKYKRA 55
Query: 61 RFNPIXXXXXXXXXXXX---FRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR 117
R PI FRNK+PKDIN+LVVGSTGYIG+FVV+E++ RGFNVIA+AR
Sbjct: 56 RLKPISSLDSGISEIATSPSFRNKSPKDINVLVVGSTGYIGRFVVKEMIKRGFNVIAVAR 115
Query: 118 EKSGIRGRNDKEETLNQLQGASVCFSDVTXXXXXXXXXXXXGTSIDVVVSCLASRSGGVK 177
EKSGIRG+NDKEETL QLQGA+VCFSDVT G +DVVVSCLASR+GG+K
Sbjct: 116 EKSGIRGKNDKEETLKQLQGANVCFSDVTELDVLEKSIENLGFGVDVVVSCLASRNGGIK 175
Query: 178 DSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEE-DS 236
DSWKIDYEA +NSLVAG+ GA HFVLLSAICVQKPLLEFQRAKLKFEAE+M +AE+ DS
Sbjct: 176 DSWKIDYEATKNSLVAGKKFGAKHFVLLSAICVQKPLLEFQRAKLKFEAELMDLAEQQDS 235
Query: 237 GFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAY--------------CVLSED 282
FTYSIVRPTAFFKSLGGQVE+VK+GKPYVMFGDGKLCA CVL E+
Sbjct: 236 SFTYSIVRPTAFFKSLGGQVEIVKDGKPYVMFGDGKLCACKPISEQDLAAFIADCVLEEN 295
Query: 283 KINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLE 342
KINQ+LPIGGPGKALTPLEQGEILF++LG+EPKFLKVPI IMDF IGVLD + KIFPS+
Sbjct: 296 KINQVLPIGGPGKALTPLEQGEILFKILGREPKFLKVPIEIMDFVIGVLDSIAKIFPSVG 355
Query: 343 DAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQELGEQ 402
+AAEFGKIGRYYAAESMLILDPETGEYS EKTPSYGKDTLE+FF +V+REGMAGQELGEQ
Sbjct: 356 EAAEFGKIGRYYAAESMLILDPETGEYSEEKTPSYGKDTLEDFFAKVIREGMAGQELGEQ 415
|
|
| UNIPROTKB|Q3Z6W4 DET1324 "Putative uncharacterized protein" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 58/256 (22%), Positives = 102/256 (39%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTX 147
+ V G +G++G ++ L GF + + N+ E + G + V
Sbjct: 5 VFVSGGSGFVGGHLLPRLAENGFKIRLLVM--------NEAEAKRVKTPGVEFVYGTVND 56
Query: 148 XXXXXXXXXXXGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207
I +V ++ + K++ E +N L A G F+ +
Sbjct: 57 LPVLMESMKDIFAVIHLVAILRENKDITFE---KVNIEGTKNMLAAADQNGVKRFIHMGI 113
Query: 208 ICVQK-PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVE-LVKEGKPY 265
+ P + +K E + K SG YSI++P+ F G + L++ KPY
Sbjct: 114 LGASADPRFTYLHSKYLAEEAVSK-----SGLDYSILKPSVMFGQGAGFITALIRSFKPY 168
Query: 266 VMF----GDGKL------------CAYCVLSEDKINQILPIGGPGKALTPLEQGEILFRL 309
+ G+GK C +L +KI+Q + IGGP + T E + +
Sbjct: 169 PLLAPVAGNGKTRLQPIWVEDVVSCLLKMLDGEKIHQSVQIGGP-RIFTYDEVLLAVMQA 227
Query: 310 LG-KEPKFLKVPIGIM 324
+G K+P+ L VP+G+M
Sbjct: 228 MGVKKPR-LHVPVGLM 242
|
|
| TIGR_CMR|DET_1324 DET_1324 "conserved hypothetical protein" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 58/256 (22%), Positives = 102/256 (39%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTX 147
+ V G +G++G ++ L GF + + N+ E + G + V
Sbjct: 5 VFVSGGSGFVGGHLLPRLAENGFKIRLLVM--------NEAEAKRVKTPGVEFVYGTVND 56
Query: 148 XXXXXXXXXXXGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207
I +V ++ + K++ E +N L A G F+ +
Sbjct: 57 LPVLMESMKDIFAVIHLVAILRENKDITFE---KVNIEGTKNMLAAADQNGVKRFIHMGI 113
Query: 208 ICVQK-PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVE-LVKEGKPY 265
+ P + +K E + K SG YSI++P+ F G + L++ KPY
Sbjct: 114 LGASADPRFTYLHSKYLAEEAVSK-----SGLDYSILKPSVMFGQGAGFITALIRSFKPY 168
Query: 266 VMF----GDGKL------------CAYCVLSEDKINQILPIGGPGKALTPLEQGEILFRL 309
+ G+GK C +L +KI+Q + IGGP + T E + +
Sbjct: 169 PLLAPVAGNGKTRLQPIWVEDVVSCLLKMLDGEKIHQSVQIGGP-RIFTYDEVLLAVMQA 227
Query: 310 LG-KEPKFLKVPIGIM 324
+G K+P+ L VP+G+M
Sbjct: 228 MGVKKPR-LHVPVGLM 242
|
|
| TAIR|locus:2040854 AT2G34460 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 49/173 (28%), Positives = 70/173 (40%)
Query: 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS 143
K + V G+TG GK +VE+L+SRGF V K+G+R + + + +
Sbjct: 45 KTKKVFVAGATGQTGKRIVEQLLSRGFAV------KAGVRDVEKAKTSFKDDPSLQIVRA 98
Query: 144 DVTXXXXXXXXXXXXGTSIDVVVSCLASRSG-GVKDSWKIDYEANRNSLVAGRNCGASHF 202
DVT G V+ R G + WK+D N + A R G F
Sbjct: 99 DVTEGPDKLAEVI--GDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKF 156
Query: 203 VLLSAICVQ--------KPLLEFQRA-KLKFEAEMMKVAE-EDSGFTYSIVRP 245
VL+S+I V P F L A++ + SG Y+IVRP
Sbjct: 157 VLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRP 209
|
|
| TIGR_CMR|GSU_0385 GSU_0385 "NADH dehydrogenase subunit, putative" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 116 (45.9 bits), Expect = 0.00034, P = 0.00034
Identities = 68/279 (24%), Positives = 120/279 (43%)
Query: 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS-GIRGRNDKEETLNQLQGASVCFSD 144
+ I V G TG++G V L+ RG ++ + ++S G+ E + Q++G D
Sbjct: 1 MKIFVTGGTGFVGGHVRRALLERGHSLRLLVHQRSEGV------EAGIEQVEG------D 48
Query: 145 VTXXXXXXXXXXXXGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204
VT ++++V G+ K+ EA RN + A R G +
Sbjct: 49 VTRPDTFAGAVAGCDATVNLVGIIREFPGRGITFE-KLHVEATRNVVEAARAAGIRRHLQ 107
Query: 205 LSAICVQKPLLE-FQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVEL----V 259
+SA+ + + R K + E E+++ +E D ++I RP+ F G V++ V
Sbjct: 108 MSALATRPDATAAYHRTKWRAE-EVVRQSELD----WTIFRPSLIFGPKGAFVDMLAGFV 162
Query: 260 KEGKPYVMFGDG--KL-------CAYC-VLSEDK---INQILPIGGPGKALTPLEQGEIL 306
+ + GDG +L A C L+ D Q + GP + LT E +I+
Sbjct: 163 RRFPAVPVVGDGTYRLQPVSVDDVARCFALALDMPETFGQTYELCGPDR-LTYNEVLDII 221
Query: 307 FRLLGKEPKFLKVP--IGIMDFAIGVLDFLVKIFPSLED 343
R+LGK +K+P +G++ + ++ FP D
Sbjct: 222 GRVLGKG-HVVKIPQPLGLLKLVVPIMQGF-SFFPLTMD 258
|
|
| TAIR|locus:2087901 Tic62 "translocon at the inner envelope membrane of chloroplasts 62" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 53/210 (25%), Positives = 90/210 (42%)
Query: 50 SQPFKLSTSSKRFNPIXXXXXXXXXXXXFRNKNPKDINILVVGSTGYIGKFVVEELVSRG 109
S+ F LS + PI N +D+ + V G+TG +G V EL+ G
Sbjct: 49 SRSFDLSLRAS--GPIRASSVVTEASPTNLNSKEEDL-VFVAGATGKVGSRTVRELLKLG 105
Query: 110 FNVIAIAR--EKSGIRGRNDKEETL-NQLQGASVC--FSDVTXXXXXXXXXXXXGTSIDV 164
F V A R +++G ++ KE L N +G V + V
Sbjct: 106 FRVRAGVRSAQRAGSLVQSVKEMKLQNTDEGTQPVEKLEIVECDLEKKDSIQPALGNASV 165
Query: 165 VVSCLASRSGGVKD---SWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAK 221
++ C+ + + D ++IDY A +N + A + ++F+L++++ K F A
Sbjct: 166 IICCIGASEKEISDITGPYRIDYLATKNLVDAATSAKVNNFILVTSLGTNK--FGFPAAI 223
Query: 222 LKFEAEMM---KVAEE---DSGFTYSIVRP 245
L ++ + AEE +SG Y+IVRP
Sbjct: 224 LNLFWGVLCWKRKAEEALIESGLNYAIVRP 253
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 405 381 0.00090 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 604 (64 KB)
Total size of DFA: 215 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.51u 0.10s 27.61t Elapsed: 00:00:01
Total cpu time: 27.52u 0.10s 27.62t Elapsed: 00:00:01
Start: Fri May 10 00:22:29 2013 End: Fri May 10 00:22:30 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 405 | |||
| PLN02657 | 390 | PLN02657, PLN02657, 3,8-divinyl protochlorophyllid | 0.0 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 4e-55 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 3e-25 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 4e-17 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 9e-14 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 9e-14 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 2e-13 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 3e-13 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 3e-13 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 1e-12 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 1e-11 | |
| PLN00141 | 251 | PLN00141, PLN00141, Tic62-NAD(P)-related group II | 1e-11 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 1e-10 | |
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 2e-10 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 1e-09 | |
| CHL00194 | 317 | CHL00194, ycf39, Ycf39; Provisional | 1e-09 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 3e-08 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 5e-08 | |
| cd05250 | 214 | cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical | 6e-08 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 9e-08 | |
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 1e-07 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 6e-07 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 1e-06 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 3e-06 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 5e-06 | |
| cd05245 | 293 | cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | 6e-06 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 7e-06 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 1e-05 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 2e-05 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 4e-05 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 4e-05 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 5e-05 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 9e-05 | |
| COG2910 | 211 | COG2910, COG2910, Putative NADH-flavin reductase [ | 1e-04 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 2e-04 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 5e-04 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 5e-04 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 7e-04 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 7e-04 | |
| cd05253 | 332 | cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera | 7e-04 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 8e-04 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 0.001 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 0.001 | |
| cd05280 | 325 | cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ | 0.001 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 0.002 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.002 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 0.002 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 0.003 | |
| cd11731 | 198 | cd11731, Lin1944_like_SDR_c, Lin1944 and related p | 0.003 | |
| pfam03435 | 380 | pfam03435, Saccharop_dh, Saccharopine dehydrogenas | 0.003 |
| >gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Score = 622 bits (1607), Expect = 0.0
Identities = 270/393 (68%), Positives = 306/393 (77%), Gaps = 18/393 (4%)
Query: 26 SSQFINQTQVKSAPYTLSDYHVNSSQPFKLSTSSKRFNPITASTAVEATTSSFRNKNPKD 85
S + + +A + + +S L + + + +TA A SFR+K PKD
Sbjct: 2 LSSSLFSLRAAAAASSSPSNRLAASLGGALVRRAAAASRGSRATAAAAA-QSFRSKEPKD 60
Query: 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
+ +LVVG+TGYIGKFVV ELV RG+NV+A+AREKSGIRG+N KE+T +L GA V F DV
Sbjct: 61 VTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDV 120
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205
T+ +SL K L + G +DVVVSCLASR+GGVKDSWKIDY+A +NSL AGR GA HFVLL
Sbjct: 121 TDADSLRKVLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLL 180
Query: 206 SAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPY 265
SAICVQKPLLEFQRAKLKFEAE+ DS FTYSIVRPTAFFKSLGGQVE+VK+G PY
Sbjct: 181 SAICVQKPLLEFQRAKLKFEAELQ---ALDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPY 237
Query: 266 VMFGDGKLCAY--------------CVLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311
VMFGDGKLCA CVL E KIN++LPIGGPGKALTPLEQGE+LFR+LG
Sbjct: 238 VMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILG 297
Query: 312 KEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSA 371
KEPKF KVPI IMDFAIGVLDFL KIFPSLEDAAEFGKIGRYYAAESML+LDPETGEYSA
Sbjct: 298 KEPKFFKVPIQIMDFAIGVLDFLAKIFPSLEDAAEFGKIGRYYAAESMLVLDPETGEYSA 357
Query: 372 EKTPSYGKDTLEEFFERVLREGMAGQELGEQTI 404
EKTPSYGKDTLEEFFERV REGMAGQELGEQ +
Sbjct: 358 EKTPSYGKDTLEEFFERVAREGMAGQELGEQAV 390
|
Length = 390 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 4e-55
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 29/220 (13%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+LVVG+TG +G+ VV EL+ RG+ V A+ R+ S + GA V D+T
Sbjct: 1 KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKL--------EAAGAEVVVGDLT 52
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
+ ESL +LE ID V+S S G + +DY+ N N + A + G FVL+S
Sbjct: 53 DAESLAAALEG----IDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVS 108
Query: 207 AICVQKP------LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG--GQVEL 258
+I KP L + AK K E + SG Y+IVRP G+V L
Sbjct: 109 SIGADKPSHPLEALGPYLDAKRKAEDYL-----RASGLDYTIVRPGGLTDDPAGTGRVVL 163
Query: 259 VKEGKP---YVMFGD-GKLCAYCVLSEDKINQILPIGGPG 294
+G + D ++ A + + I + +GG
Sbjct: 164 GGDGTRLDGPISRADVAEVLAEALDTPAAIGKTFELGGGD 203
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 3e-25
Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 30/184 (16%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
I V+G+TG G+ +V+EL++RG V A++R S + +Q D+ +
Sbjct: 1 IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAP-----APGVTPVQK------DLFD 49
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207
L L ++L +D VV +R D + ++ L A G V++SA
Sbjct: 50 LADLAEALAG----VDAVVDAFGARPD--------DSDGVKHLLDAAARAGVRRIVVVSA 97
Query: 208 ICV----QKPLLEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFFKSLGGQVELVK 260
+ A AEE SG ++IVRP A F G E+
Sbjct: 98 AGLYRDEPGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIVRPGALFDEEGETYEIGT 157
Query: 261 EGKP 264
EG P
Sbjct: 158 EGDP 161
|
Length = 182 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 4e-17
Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 44/249 (17%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAR--EKSGIRGRNDKEETLNQLQGASVCFSDV 145
ILV G+TG +G VVE L+++ +V+A+ R EK+ G V D
Sbjct: 1 ILVTGATGKLGTAVVELLLAKVASVVALVRNPEKAK----------AFAADGVEVRQGDY 50
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205
+ E+LE++ E +D ++ L S S +I +N + A + G H V L
Sbjct: 51 DDPETLERAFEG----VDRLL--LISPSDLED---RIQQH--KNFIDAAKQAGVKHIVYL 99
Query: 206 SAICVQKPLLEFQRAKLKFEAEMMKVAE--EDSGFTYSIVRPTAFFKSLGGQVELVKE-G 262
SA + + + + E SG Y+I+RP F +L + + E G
Sbjct: 100 SASGAD------EDSPFLLARDHGATEKYLEASGIPYTILRPGWFMDNLLEFLPSILEEG 153
Query: 263 KPYVMFGDGKL-----------CAYCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311
Y GDGK+ A + ++ + GP +AL+ E IL LG
Sbjct: 154 TIYGPAGDGKVAFVDRRDIAEAAAAALTEPGHEGKVYNLTGP-EALSYAELAAILSEALG 212
Query: 312 KEPKFLKVP 320
K +++ V
Sbjct: 213 KPVRYVPVS 221
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 9e-14
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 26/174 (14%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
I ++G+TG G +V E ++RG V A+ R+ + + + E L +QG DV
Sbjct: 1 KIAIIGATGRTGSAIVREALARGHEVTALVRDPAKL---PAEHEKLKVVQG------DVL 51
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
+LE ++++LE D V+S L +R+ + E RN + A + G +++
Sbjct: 52 DLEDVKEALEG----QDAVISALGTRND--LSPTTLHSEGTRNIVSAMKAAGVKRLIVVG 105
Query: 207 AICV--QKPLLEFQRAKLKFEAEMMKVAEE---------DSGFTYSIVRPTAFF 249
+P + L F + +VAE+ +SG ++ VRP A F
Sbjct: 106 GAGSLDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRPPALF 159
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 9e-14
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 47/211 (22%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
IL++G+TG+IG+ + EL+ +G V + R + +Q A V D+ +
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNT-------KRLSKEDQEPVAVVE-GDLRD 52
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207
L+SL +++ +DVV+ + +D ++D E RN L A + G HF+ +S+
Sbjct: 53 LDSLSDAVQG----VDVVIHLAGA-PRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISS 107
Query: 208 ICVQKPLLEFQ---------RAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVEL 258
+ L E K K EA + ++ Y+IVRP
Sbjct: 108 LGAYGDLHEETEPSPSSPYLAVKAKTEAVL-----REASLPYTIVRPG------------ 150
Query: 259 VKEGKPYVMFGD-GKLCAYCVLSEDKINQIL 288
V++GD + A V++ K N+
Sbjct: 151 -------VIYGDLARAIANAVVTPGKKNETF 174
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 2e-13
Identities = 60/262 (22%), Positives = 91/262 (34%), Gaps = 39/262 (14%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ-GASVCFSDV 145
ILV G+TG++G VV EL++RG V A R E L G V D+
Sbjct: 2 KILVTGATGFVGGAVVRELLARGHEVRAAVR----------NPEAAAALAGGVEVVLGDL 51
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205
+ +SL + +D V+ G + A + A G H V L
Sbjct: 52 RDPKSLVAGAKG----VDGVLLISGLLDGSDAFR-AVQVTAVVRAAEAAGA-GVKHGVSL 105
Query: 206 SAICVQ-KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKE--G 262
S + RAK EA + SG Y+ +R AF+ G E G
Sbjct: 106 SVLGADAASPSALARAKAAVEAALR-----SSGIPYTTLRRAAFYLGAGAAFIEAAEAAG 160
Query: 263 KPYVMFGDGKLC-----------AYCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311
P + G G+L A + + + + GP +ALT E L +G
Sbjct: 161 LPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGP-EALTLAELASGLDYTIG 219
Query: 312 KEPKFLKVPIGIMDFAIGVLDF 333
+ + + + +
Sbjct: 220 RPVGLIPEA--LAALTLALSGL 239
|
Length = 275 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 3e-13
Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 33/257 (12%)
Query: 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
+ + V G+TG+IG++VV L RG VI R ++ R + + L D+
Sbjct: 1 MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYAR----RLLVMGDLGQVLFVEFDL 56
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDS-WKIDYEANRNSLVAGRNCGASHFVL 204
+ ES+ K+LE DVV++ + S + E A + G +
Sbjct: 57 RDDESIRKALEG----SDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAGVERLIH 112
Query: 205 LSAICV-QKPLLEFQRAKLKFEAEMMKV-------------AEEDSGFTY--SIVRPTAF 248
+SA+ ++ R+K + E + + ED ++ F
Sbjct: 113 ISALGADANSPSKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDRFLNRFAKLLAFLPF 172
Query: 249 FKSLGGQVELVKEGKP-YVMFGD-GKLCAYCVLSEDKINQILPIGGPGKALTPLEQGEIL 306
+GG +P YV GD + A + + + + GP K T E E+L
Sbjct: 173 PPLIGGGQTKF---QPVYV--GDVAEAIARALKDPETEGKTYELVGP-KVYTLAELVELL 226
Query: 307 FRLLGKEPKFLKVPIGI 323
RL G++ + L +P+ +
Sbjct: 227 RRLGGRKRRVLPLPLWL 243
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 69.6 bits (170), Expect = 3e-13
Identities = 57/277 (20%), Positives = 95/277 (34%), Gaps = 57/277 (20%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
ILV G G+IG +VE L++ G +V + R + G+ L G D+T
Sbjct: 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPL---------LSGVEFVVLDLT 52
Query: 147 NLESLEKSLENLGTSIDVVV--SCLASRSGGVKDSWKIDYEAN----RNSLVAGRNCGAS 200
+ + +++ + D V+ + +S + N N L A R G
Sbjct: 53 DRDLVDELAK---GVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVK 109
Query: 201 HFVLLSAICV----------------QKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVR 244
FV S++ V +PL + +KL E + A G I+R
Sbjct: 110 RFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL-YGLPVVILR 168
Query: 245 PTAFF-----KSLGGQV------ELVKEGKPYVMFGDGK-----------LCAYCVLSED 282
P + L V +L+K V+ GDG A + E+
Sbjct: 169 PFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALEN 228
Query: 283 KINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKV 319
+ IG +T E E + +G + +
Sbjct: 229 PDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVY 265
|
Length = 314 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 1e-12
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 12/86 (13%)
Query: 87 NILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
I + G+TG +G +V L++ GF V + R S Q G V D
Sbjct: 1 KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSS-------TSSNEFQPSGVKVVPVDY 53
Query: 146 TNLESLEKSLENLGTSIDVVVSCLAS 171
+ ESL +L+ +D V+S L
Sbjct: 54 ASHESLVAALKG----VDAVISALGG 75
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 1e-11
Identities = 48/214 (22%), Positives = 74/214 (34%), Gaps = 41/214 (19%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
ILV G TG+IG +V L+ G+ VI + R + D+T+
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRR---------SESLNTGRIRFHEGDLTD 51
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVK-----DSWKIDYEANRNSLVAGRNCGASHF 202
++LE+ L D V+ A G D + + L A R G F
Sbjct: 52 PDALERLLA--EVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRF 109
Query: 203 VLLSAICV--------------QKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAF 248
V S+ V PL + AKL E +++ G I+R
Sbjct: 110 VFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAE-RLVEAYARAYGLRAVILRLFNV 168
Query: 249 F----------KSLGGQVELVKEGKPYVMFGDGK 272
+ + + + EGKP ++ GDG
Sbjct: 169 YGPGNPDPFVTHVIPALIRRILEGKPILLLGDGT 202
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 1e-11
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 29/190 (15%)
Query: 72 EATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEET 131
A S +N K + V G+TG GK +VE+L+++GF V K+G+R + + +
Sbjct: 4 GAEASEEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAV------KAGVRDVDKAKTS 57
Query: 132 LNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSG-GVKDSWKIDYEANRNS 190
L Q + +DVT E +K +E +G D V+ R WK+D N
Sbjct: 58 LPQDPSLQIVRADVT--EGSDKLVEAIGDDSDAVICATGFRRSFDPFAPWKVDNFGTVNL 115
Query: 191 LVAGRNCGASHFVLLSAICVQ--------KPLLEFQR-------AKLKFEAEMMKVAEED 235
+ A R G + F+L+S+I V P F AKL+ E + K
Sbjct: 116 VEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRK----- 170
Query: 236 SGFTYSIVRP 245
SG Y+IVRP
Sbjct: 171 SGINYTIVRP 180
|
Length = 251 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 19/177 (10%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT- 146
+ V G TG++G+ +V+ L+ GF V+ + R +S EE + V D+T
Sbjct: 1 VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQ 60
Query: 147 -NLESLEKSLENLGTSIDVVVSCLASRS--GGVKDSWKIDYEANRNSLVAGRNCGASHFV 203
NL + L +D V+ C AS +D+W+ + + + L F
Sbjct: 61 PNLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDIQRFH 120
Query: 204 LLSAICV--------QKPLLEFQRA------KLKFEAEMMKVAEEDSGFTYSIVRPT 246
+S V ++ L + + K EAE + V + ++ RP+
Sbjct: 121 YVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQL-VRAAATQIPLTVYRPS 176
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 58/258 (22%), Positives = 88/258 (34%), Gaps = 57/258 (22%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ--GASVCFSDV 145
ILV G+TGY G VV + G V A+ R+ K E L+ G + D+
Sbjct: 1 ILVFGATGYQGGSVVRASLKAGHPVRALV--------RDPKSELAKSLKAAGVELVEGDL 52
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLV-AGRNCGASHFV- 203
+ ESL ++L+ +DVV S V W + L A + G HF+
Sbjct: 53 DDHESLVEALKG----VDVVFS--------VTGFWLSKEIEDGKKLADAAKEAGVKHFIP 100
Query: 204 --------LLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAF---FKSL 252
+ + P + K E E + G Y+ V F F S
Sbjct: 101 SEFGNDVDRSNGVEPAVPHFD-----SKAEVE--RYIRA-LGIPYTFVYAGFFMGNFLSN 152
Query: 253 GGQVELVKEGKP-YVMFGDGKLCAYCVLSEDKINQI-------------LPIGGPGKALT 298
+ + + G G A + E+ I I PG L+
Sbjct: 153 LAPPGDLAPPRDKVTLLGPGNPKAVPLDDEEDIGTYVIKILDDPRKLKGKYIRPPGNILS 212
Query: 299 PLEQGEILFRLLGKEPKF 316
E E+ + +GK K+
Sbjct: 213 GNEIAELWSKKIGKTVKY 230
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 1e-09
Identities = 61/254 (24%), Positives = 88/254 (34%), Gaps = 45/254 (17%)
Query: 88 ILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
ILV G+TG G VV L+ GF V A+ R+ S + G V D+
Sbjct: 1 ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALA------APGVEVVQGDLD 54
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEAN----RNSLVAGRNCGASHF 202
+ ESLE +L+ V D W+ E +N + A + G HF
Sbjct: 55 DPESLEAALKG------------VYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHF 102
Query: 203 VLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG-------- 254
V S V+K L K E E SG +I+RP F ++
Sbjct: 103 VFSSVPDVEKLTLAVPHFDSKAEVEEYI---RASGLPATILRPAFFMENFLTPPAPQKME 159
Query: 255 -----QVELVKEGKPYVMFGD---GKLCAYCVLSEDK-INQILPIGGPGKALTPLEQGEI 305
V + M G A K + + + G LTP E
Sbjct: 160 DGTLTLVLPLDPDTKLPMIDVADIGPAVAAIFKDPAKFNGKTIELAGD--ELTPEEIAAA 217
Query: 306 LFRLLGKEPKFLKV 319
++LGK +++V
Sbjct: 218 FSKVLGKPVTYVQV 231
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 1e-09
Identities = 56/264 (21%), Positives = 116/264 (43%), Gaps = 38/264 (14%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+LV+G+TG +G+ +V + + G+ V + RN ++ + + GA + + D++
Sbjct: 3 LLVIGATGTLGRQIVRQALDEGYQVRCLV--------RNLRKASFLKEWGAELVYGDLSL 54
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207
E+L S + + ID SR + ++ +ID++ + A + F+ S
Sbjct: 55 PETLPPSFKGVTAIIDAST----SRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110
Query: 208 ICVQK----PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVEL-VKEG 262
+ ++ PL++ K E ++ + SG Y+I R FF+ L Q + + E
Sbjct: 111 LNAEQYPYIPLMKL---KSDIEQKL-----KKSGIPYTIFRLAGFFQGLISQYAIPILEK 162
Query: 263 KPYVMFGDGKLCAY---------CVLS---EDKINQILPIGGPGKALTPLEQGEILFRLL 310
+P + + +Y C+ S + N+ P+ GP K+ E + +L
Sbjct: 163 QPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGP-KSWNSSEIISLCEQLS 221
Query: 311 GKEPKFLKVPIGIMDFAIGVLDFL 334
G++ K +VP+ ++ + F
Sbjct: 222 GQKAKISRVPLFLLKLLRQITGFF 245
|
Length = 317 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 3e-08
Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 34/210 (16%)
Query: 87 NILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
++LV G +G+ G+ +V++L+ R G V + G + + L+G D+
Sbjct: 1 SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEFLKG------DI 54
Query: 146 TNLESLEKSLENLGTSIDVVVSCLAS-RSGGVKD-SWKIDYEANRNSLVAGRNCGASHFV 203
T+ +E++L D V A G +D W+++ +N L A + CG FV
Sbjct: 55 TDRNDVEQALSG----ADCVFHTAAIVPLAGPRDLYWEVNVGGTQNVLDACQRCGVQKFV 110
Query: 204 LLSAICV---------------QKPLLEFQRAKLKFEAE-MMKVAEEDSGFTYSIVRPTA 247
S+ V PL A+ K AE ++ A +RP
Sbjct: 111 YTSSSSVIFGGQNIHNGDETLPYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALRPAG 170
Query: 248 FF-----KSLGGQVELVKEGKPYVMFGDGK 272
F + E ++G +FG G
Sbjct: 171 IFGPGDQGLVPILFEWAEKGLVKFVFGRGN 200
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 5e-08
Identities = 65/277 (23%), Positives = 102/277 (36%), Gaps = 77/277 (27%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
IL++G T +IGK +VEEL++ G +V R ++ E + G D +
Sbjct: 3 ILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDLPEGVE----HIVG------DRND 52
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207
++LE+ L G DVVV +A V+ + GR ++ +S+
Sbjct: 53 RDALEELLG--GEDFDVVVDTIAYTPRQVERALDA---------FKGR---VKQYIFISS 98
Query: 208 ICV----------QKPLLE---------FQRAKLKFEAEMMKVAEEDSGFTYSIVRPT-- 246
V PL E + + K AE V E + F Y+IVRP
Sbjct: 99 ASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAE--DVLIEAAAFPYTIVRPPYI 156
Query: 247 ----------AFFKSLGGQVELVKEGKPYVMFGDG-------------KLCAYCVLSEDK 283
A+F + + G+P ++ GDG + +
Sbjct: 157 YGPGDYTGRLAYF------FDRLARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKA 210
Query: 284 INQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVP 320
I I I G A+T E E + LGKE + + V
Sbjct: 211 IGGIFNITGDE-AVTWDELLEACAKALGKEAEIVHVE 246
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 6e-08
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 89 LVVGSTGYIGKFVVEELV-SRGFN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
LV+G+TG +GK ++ EL+ S ++ V AI R K +K L Q+ F +
Sbjct: 4 LVLGATGLVGKHLLRELLKSPYYSKVTAIVRRKLTFPEAKEK---LVQIVVD---FERLD 57
Query: 147 NLESLEKSLENLGTSIDVVVSCLA---SRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203
++ DV CL ++G ++ K+D++ + G HF+
Sbjct: 58 EYLEAFQN-------PDVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKAAGVQHFL 110
Query: 204 LLSAICVQK--PLLEFQRAKLKFEAEMMKVAEEDSGFTY-SIVRP 245
L+S++ L + + K + E ++ K+ GF +I RP
Sbjct: 111 LVSSLGADPKSSFL-YLKVKGEVERDLQKL-----GFERLTIFRP 149
|
Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 9e-08
Identities = 45/180 (25%), Positives = 70/180 (38%), Gaps = 30/180 (16%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
ILV G+TG++G +V L+++G+ V A+ R S + ++G D+T+
Sbjct: 1 ILVTGATGFLGSNLVRALLAQGYRVRALVRSGS--DAVLLDGLPVEVVEG------DLTD 52
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDS---WKIDYEANRNSLVAGRNCGASHFVL 204
SL +++ D V A S KD ++ + E RN L A G V
Sbjct: 53 AASLAAAMKG----CDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVH 108
Query: 205 LSAICV-----------QKPLLEFQR----AKLKFEAEMMKVAEEDSGFTYSIVRPTAFF 249
S+I P E + K AE+ + G IV P+A F
Sbjct: 109 TSSIAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLDVVIVNPSAVF 168
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 1e-07
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 36/201 (17%)
Query: 67 ASTAVEATTSSFRNKNPKDINI-LVVGSTGYIGKFVVEELVSRGFNVIAIAR--EKSGIR 123
+S A+EA + + KD ++ V G+TG +G V EL+ GF V A R +++
Sbjct: 64 SSAAIEAIP---KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESL 120
Query: 124 GRNDKEETLNQLQGASVCFSDVTNLESLEKSLEN-------LGTSIDVVVSCLASRSGGV 176
++ K+ L ++G V LE +E LE LG + VV+ C+ + V
Sbjct: 121 VQSVKQMKL-DVEGT----QPVEKLEIVECDLEKPDQIGPALGNA-SVVICCIGASEKEV 174
Query: 177 KD---SWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKL---------KF 224
D ++IDY A +N + A +HF+L++++ K + F A L K
Sbjct: 175 FDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNK--VGFPAAILNLFWGVLCWKR 232
Query: 225 EAEMMKVAEEDSGFTYSIVRP 245
+AE +A SG Y+IVRP
Sbjct: 233 KAEEALIA---SGLPYTIVRP 250
|
Length = 576 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 6e-07
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+ V G+TG+IG VV ELV+ G V+ +AR +G L GA V D+ +
Sbjct: 3 VFVTGATGFIGSAVVRELVAAGHEVVGLARSDAG-------AAKLEA-AGAQVHRGDLED 54
Query: 148 LESLEK 153
L+ L K
Sbjct: 55 LDILRK 60
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 33/210 (15%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIR-GRNDKEETLNQLQGASVCFSDV 145
+ LVVG +G++G+ +VE+L+ RG + + IR + ++Q + D+
Sbjct: 1 SCLVVGGSGFLGRHLVEQLLRRGNPTVHVF----DIRPTFELDPSSSGRVQFHTG---DL 53
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSG-GVKDSWKIDYEANRNSLVAGRNCGASHFVL 204
T+ + LEK+ G +VV + G +K++ + RN + A R CG V
Sbjct: 54 TDPQDLEKAFNEKG--PNVVFHTASPDHGSNDDLYYKVNVQGTRNVIEACRKCGVKKLVY 111
Query: 205 LSAICV-----------------QKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTA 247
S+ V K + K E ++K + +SG +RP
Sbjct: 112 TSSASVVFNGQDIINGDESLPYPDKHQDAYNETKALAEKLVLKANDPESGLLTCALRPAG 171
Query: 248 FF-----KSLGGQVELVKEGKPYVMFGDGK 272
F + + G ++ K GK GDG
Sbjct: 172 IFGPGDRQLVPGLLKAAKNGKTKFQIGDGN 201
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 3e-06
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCF--SDV 145
LV G++ IG+ + L G V+ R E + G + +DV
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADR-----NEEALAELAAIEALGGNAVAVQADV 55
Query: 146 TNLESL----EKSLENLGTSIDVVV 166
++ E + E++LE G +D++V
Sbjct: 56 SDEEDVEALVEEALEEFGR-LDILV 79
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 5e-06
Identities = 59/256 (23%), Positives = 93/256 (36%), Gaps = 49/256 (19%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
ILV G+TG IG V L+ G V A+ R +++ L GA V D+ +
Sbjct: 1 ILVTGATGRIGSKVATTLLEAGRPVRALVR-------SDERAAALAAR-GAEVVVGDLDD 52
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLV-----AGRNCGA 199
V+ + LA + D A R G
Sbjct: 53 --------------PAVLAAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGV 98
Query: 200 SHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQV-EL 258
V LS++ E ++ M +V +G +RP F ++L Q +
Sbjct: 99 KRVVNLSSVGAD---PESPSGLIRGHWLMEQVLNW-AGLPVVHLRPAWFMENLLSQAPSI 154
Query: 259 VKEGKPYVMF-GDGKL-----------CAYCVLS-EDKINQILPIGGPGKALTPLEQGEI 305
K G + F GDG+L A +L E +++ + GP + LT E
Sbjct: 155 RKAGVLALPFPGDGRLPPIATDDIARVAAKLLLDPEWHGHRVYELTGP-EDLTMNEIAAA 213
Query: 306 LFRLLGKEPKFLKVPI 321
L R+LG+ +++ VP
Sbjct: 214 LSRVLGRPVRYVPVPE 229
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+LV G+TGY+G +V L+ G V A+ R + R + +V D+ +
Sbjct: 1 VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADR-------PWSERVTVVRGDLED 53
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207
ESL +LE + T+ +V S + D + D A RN A R G + L
Sbjct: 54 PESLRAALEGIDTAYYLVHSMGSG-----GDFEEADRRAARNFARAARAAGVKRIIYLGG 108
Query: 208 I 208
+
Sbjct: 109 L 109
|
This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 7e-06
Identities = 66/293 (22%), Positives = 103/293 (35%), Gaps = 77/293 (26%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+LV G+ G+IG+ +V++L+SRG V R + SV +++
Sbjct: 1 KVLVTGANGFIGRALVDKLLSRGEEVRIAVR--------------NAENAEPSVVLAELP 46
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSW--------KIDYEANRNSLVAGRNCG 198
+++S +D VV A+R + D K++ E R A G
Sbjct: 47 DIDSFTDLFLG----VDAVVHL-AARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQG 101
Query: 199 ASHFVLLSAICV------QKPLLE---------FQRAKLKFEAEM-MKVAEEDSGFTYSI 242
FV LS++ V P E + R+KL EAE + G I
Sbjct: 102 VKRFVFLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKL--EAERALLELGASDGMEVVI 159
Query: 243 VRP--------TAFFKSLGGQVELVKEGKPYVMFGDGK------------LCAYCVLSED 282
+RP F L + L+ G P C+
Sbjct: 160 LRPPMVYGPGVRGNFARL---MRLIDRGLPLPPGAVKNRRSLVSLDNLVDAIYLCISLPK 216
Query: 283 KINQI-LPIGGPGKALTPLEQGEILFRL---LGKEPKFLKVPIGIMDFAIGVL 331
N L GP P+ E++ + LGK + L VP G++ FA +L
Sbjct: 217 AANGTFLVSDGP-----PVSTAELVDEIRRALGKPTRLLPVPAGLLRFAAKLL 264
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 66/284 (23%), Positives = 100/284 (35%), Gaps = 81/284 (28%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS--D 144
+LV G G+IG +VE L+ RG VI + +G K+E L +++ +V F D
Sbjct: 1 RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTG------KKENLPEVK-PNVKFIEGD 53
Query: 145 VTNLESLEKSLEN------LGTSIDVVVSCLASRSGGVKDSWKIDYEANR----NSLVAG 194
+ + E +E + E V S ++D K D+E N N L A
Sbjct: 54 IRDDELVEFAFEGVDYVFHQAAQASVPRS--------IEDPIK-DHEVNVLGTLNLLEAA 104
Query: 195 RNCGASHFVLLSAICV--------------QKPLLEFQRAKLKFEAEMMKVAEEDSGFTY 240
R G FV S+ V PL + +K E +V G
Sbjct: 105 RKAGVKRFVYASSSSVYGDPPYLPKDEDHPPNPLSPYAVSKYAGE-LYCQVFARLYGLPT 163
Query: 241 SIVRPTAFFKSLG-GQVELVKE-------------GKPYVMFGDGK-------------- 272
+R +F G Q G+P ++GDG+
Sbjct: 164 VSLR---YFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEA 220
Query: 273 --LCAYCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEP 314
L A ++ IG GK + E E++ +LGKE
Sbjct: 221 NLLAAT----AGAGGEVYNIGT-GKRTSVNELAELIREILGKEL 259
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+L+ G + IG + L ++G+ VIA AR + + V DVT+
Sbjct: 3 VLITGCSSGIGLALALALAAQGYRVIATARNPDKL-----ESLGELLNDNLEVLELDVTD 57
Query: 148 LESLEKSLEN---LGTSIDVVVSC 168
ES++ +++ IDV+V+
Sbjct: 58 EESIKAAVKEVIERFGRIDVLVNN 81
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 4e-05
Identities = 46/213 (21%), Positives = 66/213 (30%), Gaps = 73/213 (34%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
ILV G G+IG +V L+ RG V+ I R
Sbjct: 1 ILVTGGAGFIGSHLVRRLLERGHEVVVIDR------------------------------ 30
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKI-DYEANRNSLV----AGRNCGASHF 202
+DVVV A D+E N + A R G F
Sbjct: 31 --------------LDVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRF 76
Query: 203 VLLSAICV--------------QKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRP-TA 247
V S+ V +PL + +KL E +++ E G I+R
Sbjct: 77 VYASSASVYGSPEGLPEEEETPPRPLSPYGVSKLAAE-HLLRSYGESYGLPVVILRLANV 135
Query: 248 FFKSLGGQVELV--------KEGKPYVMFGDGK 272
+ +++ V EGKP +FG G
Sbjct: 136 YGPGQRPRLDGVVNDFIRRALEGKPLTVFGGGN 168
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 4e-05
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 20/84 (23%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
IL+ G+TG +G+ +V L RG+ VI R +L +L D+T
Sbjct: 1 KILITGATGMLGRALVRLLKERGYEVIGTGR----------SRASLFKL--------DLT 42
Query: 147 NLESLEKSLENLGTSIDVVVSCLA 170
+ +++E+++ + DV+++C A
Sbjct: 43 DPDAVEEAIRD--YKPDVIINCAA 64
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 5e-05
Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 15/92 (16%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS--- 143
LV G++ IG+ + L G V+ AR E ++ A +
Sbjct: 7 VALVTGASSGIGRAIARALAREGARVVVAAR----RSEEEAAEALAAAIKEAGGGRAAAV 62
Query: 144 --DVTNLES-----LEKSLENLGTSIDVVVSC 168
DV++ E + + E G ID++V+
Sbjct: 63 AADVSDDEESVEALVAAAEEEFG-RIDILVNN 93
|
Length = 251 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 9e-05
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS--DV 145
+L+ G TG +G + L + G + + + G + L L GA V + DV
Sbjct: 3 VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEAL-GAEVTVAACDV 61
Query: 146 TNLESLEKSLENLGTS---IDVVV 166
+ ++L L L + +D VV
Sbjct: 62 ADRDALAALLAALPAALGPLDGVV 85
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 37/203 (18%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
I ++G++G G +++E + RG V AI R S L QG ++ D+ +
Sbjct: 3 IAIIGASGKAGSRILKEALKRGHEVTAIVRNAS----------KLAARQGVTILQKDIFD 52
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGG----VKDSWKIDYEANRNS-----LVAGRNCG 198
L SL L D V+S + + S + EA + + LV G G
Sbjct: 53 LTSLASDLAGH----DAVISAFGAGASDNDELHSKSIEALIEALKGAGVPRLLVVG---G 105
Query: 199 A-SHFVLLSAICVQKPLLEFQ-RAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFK------ 250
A S + V P + + + +AE + + ++ V P AFF+
Sbjct: 106 AGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPGERTG 165
Query: 251 --SLGGQVELV-KEGKPYVMFGD 270
LGG LV +G+ + + D
Sbjct: 166 NYRLGGDQLLVNAKGESRISYAD 188
|
Length = 211 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCF---- 142
L+ G++ IG + ++L RG+N+I +AR + + + E G V
Sbjct: 8 TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT---GVEVEVIPAD 64
Query: 143 -SDVTNLESLEKSLENLGTSIDVVVSC 168
SD LE LE L+ G IDV+V+
Sbjct: 65 LSDPEALERLEDELKERGGPIDVLVNN 91
|
Length = 265 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 5e-04
Identities = 45/191 (23%), Positives = 66/191 (34%), Gaps = 36/191 (18%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+LV G++G++ VVE+L+ RG+ V A R+ S + K L L
Sbjct: 1 VLVTGASGFVASHVVEQLLERGYKVRATVRDPS----KVKKVNHLLDLDAKPGRLELAVA 56
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDS---WKIDYEANRNSLVAGRNCGA-SHFV 203
+ E+S + + V S KD K N+L A + FV
Sbjct: 57 DLTDEQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKRFV 116
Query: 204 LLS---AICVQKP-------------LLEFQRAKL---------KFEAEM--MKVAEEDS 236
L S ++ + KP L EF K AE K A+E+
Sbjct: 117 LTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADEN- 175
Query: 237 GFTYSIVRPTA 247
V PT
Sbjct: 176 NIDLITVIPTL 186
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 5e-04
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCF--SD 144
+LV G GYIG V EL+ G++V+ + +G R E L +++ + F D
Sbjct: 1 KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHR------EALPRIEKIRIEFYEGD 54
Query: 145 VTNLESLEKSLENLGTSIDVVV 166
+ + +L+K ID V+
Sbjct: 55 IRDRAALDKVFAE--HKIDAVI 74
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 7e-04
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS-DVT 146
LV G++ IG+ + L + G V R + E + L G + DV+
Sbjct: 3 ALVTGASRGIGRAIALRLAAEGAKVAVTDR---SEEAAAETVEEIKALGGNAAALEADVS 59
Query: 147 NLES----LEKSLENLGTSIDVVVSC 168
+ E+ +EK G +D++V+
Sbjct: 60 DREAVEALVEKVEAEFG-PVDILVNN 84
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 7e-04
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 22/93 (23%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS---------GIRGRNDKEETLNQLQGA 138
+LV G+TG+I +VE+L+ G+ V R S G ND+ E
Sbjct: 2 VLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEF------- 54
Query: 139 SVCFSDVTNLESLEKSLENLGTSIDVVVSCLAS 171
V D+T + +++L+ +D V+ AS
Sbjct: 55 -VIVDDLTAPNAWDEALKG----VDYVIHV-AS 81
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 27/137 (19%)
Query: 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRND------KE---ETLNQLQ 136
+ ILV G+ G+IG V + L+ RG V+ GI ND KE E L +
Sbjct: 1 MKILVTGAAGFIGFHVAKRLLERGDEVV-------GIDNLNDYYDVRLKEARLELLGKSG 53
Query: 137 GASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSW-------KIDYEANRN 189
G D+ + E+L + ++ D V+ LA+++ GV+ S + N
Sbjct: 54 GFKFVKGDLEDREALRRLFKD--HEFDAVIH-LAAQA-GVRYSLENPHAYVDSNIVGFLN 109
Query: 190 SLVAGRNCGASHFVLLS 206
L R+ G H V S
Sbjct: 110 LLELCRHFGVKHLVYAS 126
|
This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 40.5 bits (96), Expect = 8e-04
Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 15/88 (17%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL-----QGASVC 141
LV G++ IG+ + L + G V+ + E +L + +
Sbjct: 7 TALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAA------EALAAELRAAGGEARVLV 60
Query: 142 FSDVTNLESLEKSLENLGTS---IDVVV 166
F DV++ ++ +E + +D++V
Sbjct: 61 F-DVSDEAAVRALIEAAVEAFGALDILV 87
|
Length = 246 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 48/211 (22%), Positives = 75/211 (35%), Gaps = 40/211 (18%)
Query: 89 LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL 148
LV G+TG++G VV L+ +G V + R S L L + D+ +
Sbjct: 4 LVTGATGFVGSAVVRLLLEQGEEVRVLVRPTS-------DRRNLEGL-DVEIVEGDLRDP 55
Query: 149 ESLEKSLENLGTSIDVVVSCLASRSGGVKDS---WKIDYEANRNSLVAGRNCGASHFVLL 205
SL K++ + A D + + E RN L A G V
Sbjct: 56 ASLRKAVA----GCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYT 111
Query: 206 SAICVQKPLLEFQRA----------------KLKFEAEMMKVAEE---DSGFTYSIVRPT 246
S++ + A + KF AE + A E + G IV P+
Sbjct: 112 SSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAE--QAALEMAAEKGLPVVIVNPS 169
Query: 247 AFFKSLG-GQVELVKEGKPYVMFGDGKLCAY 276
+G ++ G+ V F +GK+ AY
Sbjct: 170 T---PIGPRDIKPTPTGRIIVDFLNGKMPAY 197
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS--DV 145
IL+ G+ G IG +V+ ++ G VIA +K + E + + + D+
Sbjct: 7 ILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNEL--LESLGKEFKSKKLSLVELDI 64
Query: 146 TNLESLEKSLENL---GTSIDVVVSC 168
T+ ESLE+ L ID V+C
Sbjct: 65 TDQESLEEFLSKSAEKYGKIDGAVNC 90
|
Length = 256 |
| >gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 0.001
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 66 TASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGR 125
TA+ +V + + P+D +LV G+TG +G V L G+ V+A+ G+
Sbjct: 130 TAALSVHRLEDN--GQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALT-------GK 180
Query: 126 NDKEETLNQLQGASVCFSDVTNLESLEKSLE 156
++ + L L GAS L+ +K L
Sbjct: 181 EEQADYLKSL-GASEVLDREDLLDESKKPLL 210
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.002
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 21/89 (23%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL-----QGASVCF 142
L+ G++ IG+ L G V+ AR +EE L L GA++
Sbjct: 9 ALITGASSGIGEATARALAEAGAKVVLAAR----------REERLEALADEIGAGAALAL 58
Query: 143 S-DVTNLESLEKSLENL----GTSIDVVV 166
+ DVT+ ++E ++E L G ID++V
Sbjct: 59 ALDVTDRAAVEAAIEALPEEFG-RIDILV 86
|
Length = 246 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 39.0 bits (92), Expect = 0.002
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 14/90 (15%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCF---- 142
LV G++ IG+ + E L ++G NV+ + E + ++
Sbjct: 7 VALVTGASRGIGRAIAERLAAQGANVVI-----NYASSEAGAEALVAEIGALGGKALAVQ 61
Query: 143 SDVTNLES----LEKSLENLGTSIDVVVSC 168
DV++ ES ++++ G +D++V+
Sbjct: 62 GDVSDAESVERAVDEAKAEFG-GVDILVNN 90
|
Length = 248 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.002
Identities = 45/202 (22%), Positives = 68/202 (33%), Gaps = 57/202 (28%)
Query: 90 VVGSTGYIGKFVVEELVSRGFN--VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+ G+TG++GK ++E+L+ + + R K G E L Q F +
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDG----ESALERLRQELLKYGLFDRLKA 56
Query: 148 LESLE-----KSLENLGTS----------IDVVVSCLASRSGGVKDSWKIDYEANRNSLV 192
LE + S NLG S +DV++ A+ V + Y R + V
Sbjct: 57 LERIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAAT----VN--FVEPYSDLRATNV 110
Query: 193 AG--------RNCGASHFVLLS-AIC----------VQKPLLEFQRAKL----------K 223
G + F +S A L E + A L K
Sbjct: 111 LGTREVLRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSK 170
Query: 224 FEAEMMKVAEEDSGFTYSIVRP 245
+ AE + V E G I RP
Sbjct: 171 WLAEQL-VREAAGGLPVVIYRP 191
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.003
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 15/114 (13%)
Query: 89 LVVGSTGYIGKFVVEELVSRGFNVIAI--AREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
LV G+ IG + EL++ G+ VIA + + T +Q++ + DVT
Sbjct: 6 LVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKEL---DVT 62
Query: 147 NLESLEKSL----ENLGTSIDVVVSCLA-SRSGGVK----DSWKIDYEANRNSL 191
+ E ++L E G +D++V+ +R K W N NS+
Sbjct: 63 DTEECAEALAEIEEEEGP-VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSV 115
|
Length = 245 |
| >gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.003
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 20/84 (23%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
I+V+G+TG IG V + L + G VI R SG Q+ D+T+
Sbjct: 1 IIVIGATGTIGLAVAQLLSAHGHEVITAGR-SSGD----------YQV--------DITD 41
Query: 148 LESLEKSLENLGTSIDVVVSCLAS 171
S++ E +G D +VS
Sbjct: 42 EASIKALFEKVGH-FDAIVSTAGD 64
|
Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198 |
| >gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+L++G+ G +G+ V L G I +A ++S + + L A D N
Sbjct: 1 VLIIGA-GGVGQGVAPLLARHGDLEITVA-DRSLEKAQALAAPKLGLRFIAIAV--DADN 56
Query: 148 LESLEKSLENLGTSIDVVVSCL 169
E+L L+ D+V++
Sbjct: 57 YEALVALLKEG----DLVINLA 74
|
This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 405 | |||
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.98 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.98 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.98 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.97 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.97 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.97 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.97 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.97 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.97 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.97 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.97 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.97 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.97 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.97 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.97 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.97 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.97 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.97 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.97 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.96 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.96 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.96 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.96 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.96 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.96 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.96 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.96 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.96 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.96 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.96 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.96 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.95 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.95 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.95 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.95 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.95 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.95 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.94 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.94 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.94 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.94 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.93 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.93 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.92 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.89 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.89 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.89 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.89 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.89 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.88 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.88 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.88 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.88 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.87 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.87 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.87 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.87 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.86 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.86 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.86 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.86 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.86 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.85 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.85 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.85 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.84 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.84 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.84 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.84 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.84 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.83 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.83 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.83 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.83 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.83 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.83 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.83 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.82 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.82 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.82 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.82 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.82 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.82 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.82 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.82 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.82 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.82 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.82 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.82 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.81 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.81 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.81 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.81 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.81 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.81 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.81 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.81 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.8 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.8 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.8 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.8 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.8 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.8 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.8 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.8 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.8 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.8 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.79 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.79 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.79 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.79 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.79 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.79 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.79 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.79 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.79 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.78 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.78 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.78 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.78 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.78 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.77 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.77 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.77 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.77 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.77 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.76 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.76 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.76 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.76 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.76 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.76 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.76 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.75 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.75 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.75 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.75 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.75 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.75 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.75 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.74 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.74 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.74 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.74 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.73 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.73 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.73 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.73 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.73 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.73 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.72 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.72 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.72 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.72 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.72 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.72 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.71 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.71 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.71 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.71 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.7 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.7 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.69 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.69 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.68 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.68 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.68 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.67 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.67 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.67 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.66 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.65 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.64 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.63 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.61 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.61 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.61 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.6 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.59 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.58 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.55 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.55 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.55 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.53 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.53 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.52 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.5 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.48 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.45 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.36 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.35 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.22 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.2 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.19 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.12 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 99.11 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.07 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.91 | |
| PLN00106 | 323 | malate dehydrogenase | 98.87 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.85 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.71 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.69 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.66 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.63 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.52 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.5 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.46 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.45 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.43 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.33 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 98.29 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 98.17 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.16 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.12 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.1 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.08 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.07 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.05 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.05 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 97.95 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.91 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.85 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.78 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.78 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.75 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.75 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.74 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.73 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.71 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.7 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.7 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 97.68 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.68 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.66 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.63 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.63 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.61 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 97.5 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.49 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.49 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 97.48 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.46 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.45 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 97.45 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.43 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.43 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.42 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.41 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.41 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.35 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.35 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.33 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 97.29 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.26 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.25 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.22 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 97.22 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 97.22 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 97.21 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 97.2 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.2 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 97.17 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.17 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 97.16 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.15 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.14 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.13 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 97.13 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 97.09 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.08 | |
| PLN02602 | 350 | lactate dehydrogenase | 97.08 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.08 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 97.05 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.05 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.05 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 97.04 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.03 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 97.02 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 97.02 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 96.99 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.99 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.96 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 96.95 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.95 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 96.95 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.94 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.93 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 96.91 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 96.9 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.89 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.88 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.86 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.85 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.85 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.78 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.78 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.75 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 96.74 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.73 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.73 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.72 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.71 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 96.7 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.7 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 96.69 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.65 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 96.65 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.64 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.63 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.59 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.58 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.58 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.58 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.54 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.52 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 96.52 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.51 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.5 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 96.5 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.49 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.47 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.46 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.42 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.41 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.41 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 96.38 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 96.38 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 96.38 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.33 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 96.33 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 96.33 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 96.32 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 96.32 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.32 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.31 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.31 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 96.3 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 96.3 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.29 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.28 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.26 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 96.24 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 96.22 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.19 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.19 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.18 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.17 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.17 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 96.17 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.17 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.16 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.15 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.15 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.15 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 96.14 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 96.13 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 96.13 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 96.12 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 96.11 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 96.11 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.07 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 96.04 | |
| PLN02775 | 286 | Probable dihydrodipicolinate reductase | 96.03 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.02 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.01 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.0 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 95.99 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 95.97 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 95.96 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 95.95 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.94 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 95.94 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 95.91 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.9 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.89 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.88 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 95.87 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 95.86 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 95.85 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.82 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.82 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 95.82 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 95.81 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 95.8 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 95.79 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 95.78 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.75 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 95.73 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 95.71 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.7 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 95.68 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 95.68 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 95.66 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.66 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 95.64 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 95.64 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 95.63 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 95.61 |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-45 Score=354.88 Aligned_cols=328 Identities=80% Similarity=1.268 Sum_probs=280.8
Q ss_pred ccccccCCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHH
Q 043385 74 TTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEK 153 (405)
Q Consensus 74 ~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~ 153 (405)
...+++....++++||||||||+||++++++|+++|++|++++|+..+..............++++++.+|++|++++.+
T Consensus 49 ~~~~~~~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~ 128 (390)
T PLN02657 49 AAQSFRSKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRK 128 (390)
T ss_pred ccccccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHH
Confidence 34455666678899999999999999999999999999999999876532111111111223578999999999999999
Q ss_pred HHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhh
Q 043385 154 SLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAE 233 (405)
Q Consensus 154 ~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~ 233 (405)
++++...++|+||||++.......+.+++|+.++.+++++|++.|+++||++||.+++.|..+|..+|...|+.++. .
T Consensus 129 ~~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p~~~~~~sK~~~E~~l~~-~- 206 (390)
T PLN02657 129 VLFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPLLEFQRAKLKFEAELQA-L- 206 (390)
T ss_pred HHHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCcchHHHHHHHHHHHHHHh-c-
Confidence 99852114899999998654444567889999999999999999999999999999999999999999999998876 2
Q ss_pred hcCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeee--------------hhhcccccccceEeccCCCCCCCH
Q 043385 234 EDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCA--------------YCVLSEDKINQILPIGGPGKALTP 299 (405)
Q Consensus 234 ~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~--------------~~~~~~~~~~~~y~i~~~g~~~t~ 299 (405)
..+++++++||+.+|++...++..+..|+++.++|+|...+ +++..+...+++||++||++.+|+
T Consensus 207 -~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~ 285 (390)
T PLN02657 207 -DSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTP 285 (390)
T ss_pred -cCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCH
Confidence 37999999999999999888888888899988899887632 223344566899999987568999
Q ss_pred HHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccch
Q 043385 300 LEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGK 379 (405)
Q Consensus 300 ~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~ 379 (405)
+|+++.+.+.+|+++++..+|.+.+.....+.+.+..+++.+.+..+++++.+||....++.+|+++.+++-.-.|.||.
T Consensus 286 ~Eia~~l~~~lG~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~~~d~~~~~~~~~~~~~~g~ 365 (390)
T PLN02657 286 LEQGEMLFRILGKEPKFFKVPIQIMDFAIGVLDFLAKIFPSLEDAAEFGKIGRYYAAESMLVLDPETGEYSAEKTPSYGK 365 (390)
T ss_pred HHHHHHHHHHhCCCCceEEcCHHHHHHHHHHHHHhhhhCcchhhhHHHHhhhhhhcchhhhccCccccccccccCCccch
Confidence 99999999999999999999999999888888888888888999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhhccchhhccccccC
Q 043385 380 DTLEEFFERVLREGMAGQELGEQTI 404 (405)
Q Consensus 380 ~~l~~~~~~~~~~~~~~~~~~~~~~ 404 (405)
++|+||++++.++|+.++|+|+|++
T Consensus 366 ~~l~~~~~~~~~~~~~~~~~~~~~~ 390 (390)
T PLN02657 366 DTLEEFFERVAREGMAGQELGEQAV 390 (390)
T ss_pred hhHHHHHHHHHhcCCcccCcccccC
Confidence 9999999999999999999999975
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=257.60 Aligned_cols=266 Identities=19% Similarity=0.233 Sum_probs=210.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
|++|||||.||||+++++.++++.. +|+.++.-. ..+....+..+...++..++++|+.|.+.+.++++. .++|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLT--YAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~--~~~D 76 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLT--YAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKE--YQPD 76 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEeccc--ccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHh--cCCC
Confidence 5899999999999999999999863 466666532 222223334455557899999999999999999996 3699
Q ss_pred EEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEcccccc----------------CCChhHHHHH
Q 043385 164 VVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAICVQ----------------KPLLEFQRAK 221 (405)
Q Consensus 164 ~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~~~~----------------~~~~~y~~sK 221 (405)
+|+|.|+-... ++..++++|+.||.+|++++++...+ ||+++|+..+| .|.+||.+||
T Consensus 77 ~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASK 156 (340)
T COG1088 77 AVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASK 156 (340)
T ss_pred eEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhh
Confidence 99999996542 45678999999999999999998764 99999999887 5778999999
Q ss_pred HHHHHHHHHHhhhcCCceEEEEecCCcccCc-------hHHHHHHHhCCCeEEecCCeeeehhhc------------ccc
Q 043385 222 LKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL-------GGQVELVKEGKPYVMFGDGKLCAYCVL------------SED 282 (405)
Q Consensus 222 ~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~-------~~~~~~~~~g~~~~~~g~g~~~~~~~~------------~~~ 282 (405)
+....+++++.. .+|++++|.|+.+-|||. +.++..+..|++++++|+|.+.++++. ...
T Consensus 157 AasD~lVray~~-TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg 235 (340)
T COG1088 157 AASDLLVRAYVR-TYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKG 235 (340)
T ss_pred hhHHHHHHHHHH-HcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcC
Confidence 999999999987 799999999999999985 345677788999999999999995544 344
Q ss_pred cccceEeccCCCCCCCHHHHHHHHHHHcCCCCC-----eeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhh
Q 043385 283 KINQILPIGGPGKALTPLEQGEILFRLLGKEPK-----FLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAE 357 (405)
Q Consensus 283 ~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~-----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (405)
..|++|||+|. ...+-.|+++.+++.+|+..+ +..+... .|- +
T Consensus 236 ~~GE~YNIgg~-~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DR------------------------pGH-------D 283 (340)
T COG1088 236 KIGETYNIGGG-NERTNLEVVKTICELLGKDKPDYRDLITFVEDR------------------------PGH-------D 283 (340)
T ss_pred cCCceEEeCCC-ccchHHHHHHHHHHHhCccccchhhheEeccCC------------------------CCC-------c
Confidence 55899999995 789999999999999998655 2222111 111 2
Q ss_pred hhcccCccccccccccCCcc----chhhHHHHHHH
Q 043385 358 SMLILDPETGEYSAEKTPSY----GKDTLEEFFER 388 (405)
Q Consensus 358 ~~~~~d~~~~~~~lg~~P~~----~~~~l~~~~~~ 388 (405)
..+.+|+++..++|||.|.+ |++...+|+.+
T Consensus 284 ~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~ 318 (340)
T COG1088 284 RRYAIDASKIKRELGWRPQETFETGLRKTVDWYLD 318 (340)
T ss_pred cceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHh
Confidence 33457899999999999954 33444455544
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=274.17 Aligned_cols=284 Identities=20% Similarity=0.332 Sum_probs=210.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|+|||||||||++++++|+++||+|++++|+.++. ..+.. .+++++.+|++|++++.+++++ +|+|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~-------~~l~~-~~v~~v~~Dl~d~~~l~~al~g----~d~V 68 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA-------SFLKE-WGAELVYGDLSLPETLPPSFKG----VTAI 68 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh-------hhHhh-cCCEEEECCCCCHHHHHHHHCC----CCEE
Confidence 5899999999999999999999999999999986542 11222 3799999999999999999998 9999
Q ss_pred EEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-CCChhHHHHHHHHHHHHHHHhhhcCCceEEEEe
Q 043385 166 VSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ-KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVR 244 (405)
Q Consensus 166 v~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~-~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilR 244 (405)
||+++....+....+++|+.++.+++++|+++|++|||++||.++. .+..+|..+|.++|++++. .+++++++|
T Consensus 69 i~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~~~~~~~K~~~e~~l~~-----~~l~~tilR 143 (317)
T CHL00194 69 IDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPYIPLMKLKSDIEQKLKK-----SGIPYTIFR 143 (317)
T ss_pred EECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccCCChHHHHHHHHHHHHHH-----cCCCeEEEe
Confidence 9998765545556788999999999999999999999999997654 3567899999999998876 799999999
Q ss_pred cCCcccCch-HHHHHHHhCCCeEEecCCeeee-------------hhhcccccccceEeccCCCCCCCHHHHHHHHHHHc
Q 043385 245 PTAFFKSLG-GQVELVKEGKPYVMFGDGKLCA-------------YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLL 310 (405)
Q Consensus 245 p~~v~g~~~-~~~~~~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~ 310 (405)
|+.+|++.. .+...+..+.+..+.+ +.+.. .++..+...+++||++|+ +.+|+.|+++.+.+.+
T Consensus 144 p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~-~~~s~~el~~~~~~~~ 221 (317)
T CHL00194 144 LAGFFQGLISQYAIPILEKQPIWITN-ESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGP-KSWNSSEIISLCEQLS 221 (317)
T ss_pred ecHHhhhhhhhhhhhhccCCceEecC-CCCccCccCHHHHHHHHHHHhcCccccCcEEEecCC-CccCHHHHHHHHHHHh
Confidence 999997642 2222233344444333 23222 223334557899999997 8999999999999999
Q ss_pred CCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHh
Q 043385 311 GKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVL 390 (405)
Q Consensus 311 g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~ 390 (405)
|++..+.++|.+..+..+.+...+.. .+.....+... ...........+...+...+|+.| ..+.++++++++.+
T Consensus 222 g~~~~~~~vp~~~~~~~~~~~~~~~~-~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~g~~p-~~~~~~~~~~~~~~ 296 (317)
T CHL00194 222 GQKAKISRVPLFLLKLLRQITGFFEW-TWNISDRLAFV---EILNTSNNFSSSMAELYKIFKIDP-NELISLEDYFQEYF 296 (317)
T ss_pred CCCCeEEeCCHHHHHHHHHHHhhccc-chhhHHHHHHH---HHHhcCCCcCCCHHHHHHHhCCCh-hhhhhHHHHHHHHH
Confidence 99999999999988877665553321 11111111110 111122233344556677889877 44567888888887
Q ss_pred hcc
Q 043385 391 REG 393 (405)
Q Consensus 391 ~~~ 393 (405)
...
T Consensus 297 ~~~ 299 (317)
T CHL00194 297 ERI 299 (317)
T ss_pred HHH
Confidence 654
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=257.00 Aligned_cols=256 Identities=23% Similarity=0.305 Sum_probs=199.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||+|+||+|.+.+|++.|++|++++.-..... +.+... .+++++||+.|.+.|++.|+. +++|+|
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~------~~v~~~-~~~f~~gDi~D~~~L~~vf~~--~~idaV 71 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHK------IALLKL-QFKFYEGDLLDRALLTAVFEE--NKIDAV 71 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCH------HHhhhc-cCceEEeccccHHHHHHHHHh--cCCCEE
Confidence 68999999999999999999999999999998765432 222221 168999999999999999998 689999
Q ss_pred EEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------------CCChhHHHHHHHHHH
Q 043385 166 VSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------------KPLLEFQRAKLKFEA 226 (405)
Q Consensus 166 v~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------------~~~~~y~~sK~~~E~ 226 (405)
||+||... ..+.++++.|+.||.+|+++|++.|+++|||.||+.+| .|.++||+||...|+
T Consensus 72 iHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~ 151 (329)
T COG1087 72 VHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEE 151 (329)
T ss_pred EECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHH
Confidence 99999653 25567999999999999999999999999999999998 467899999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCc------------hHH---HHHHHhCC--CeEEecC------Ceeeehhhcc---
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSL------------GGQ---VELVKEGK--PYVMFGD------GKLCAYCVLS--- 280 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~------------~~~---~~~~~~g~--~~~~~g~------g~~~~~~~~~--- 280 (405)
+++.+++ ..+++++++|..++.|.. ..+ +.+..-|+ .+.++|+ |...||.++.
T Consensus 152 iL~d~~~-a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DL 230 (329)
T COG1087 152 ILRDAAK-ANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDL 230 (329)
T ss_pred HHHHHHH-hCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHH
Confidence 9999988 678999999999988721 122 22333333 2556664 5555533321
Q ss_pred ------------cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhh
Q 043385 281 ------------EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFG 348 (405)
Q Consensus 281 ------------~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (405)
......+||++. |...|..|+++.+.++.|+++++.-.|.. .|
T Consensus 231 A~aH~~Al~~L~~~g~~~~~NLG~-G~G~SV~evi~a~~~vtg~~ip~~~~~RR------------------------~G 285 (329)
T COG1087 231 ADAHVLALKYLKEGGSNNIFNLGS-GNGFSVLEVIEAAKKVTGRDIPVEIAPRR------------------------AG 285 (329)
T ss_pred HHHHHHHHHHHHhCCceeEEEccC-CCceeHHHHHHHHHHHhCCcCceeeCCCC------------------------CC
Confidence 122236999997 69999999999999999998887655542 12
Q ss_pred hhhhhhhhhhhcccCccccccccccCCcc-chhhHH
Q 043385 349 KIGRYYAAESMLILDPETGEYSAEKTPSY-GKDTLE 383 (405)
Q Consensus 349 ~~~~~~~~~~~~~~d~~~~~~~lg~~P~~-~~~~l~ 383 (405)
.... +.-|++++++.|||+|.+ +++++.
T Consensus 286 Dpa~-------l~Ad~~kA~~~Lgw~p~~~~L~~ii 314 (329)
T COG1087 286 DPAI-------LVADSSKARQILGWQPTYDDLEDII 314 (329)
T ss_pred CCce-------eEeCHHHHHHHhCCCcccCCHHHHH
Confidence 2222 335889999999999966 444433
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=274.94 Aligned_cols=224 Identities=19% Similarity=0.166 Sum_probs=177.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchh-Hhh--hccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKE-ETL--NQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~-~~~--~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++|+|||||||||||++|+++|+++|++|++++|............ ... ....++.++.+|+.|.+.+.+++++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~-- 90 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN-- 90 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC--
Confidence 45689999999999999999999999999999998654321100000 000 1113578899999999999999988
Q ss_pred CCccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHH
Q 043385 160 TSIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRA 220 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~s 220 (405)
+|+|||+|+... .++...+++|+.|+.+++++|++.++++|||+||.++|. |.+.|+.+
T Consensus 91 --~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~s 168 (348)
T PRK15181 91 --VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVT 168 (348)
T ss_pred --CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHH
Confidence 999999998643 234457899999999999999999999999999998872 44679999
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----------HHHHHHHhCCCeEEecCCeeeehhh-----------
Q 043385 221 KLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----------GQVELVKEGKPYVMFGDGKLCAYCV----------- 278 (405)
Q Consensus 221 K~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----------~~~~~~~~g~~~~~~g~g~~~~~~~----------- 278 (405)
|..+|.++..++. ..+++++++||+++|||.. .++..+..++++.++|+|.+.++++
T Consensus 169 K~~~e~~~~~~~~-~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~ 247 (348)
T PRK15181 169 KYVNELYADVFAR-SYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLL 247 (348)
T ss_pred HHHHHHHHHHHHH-HhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHH
Confidence 9999999988765 5799999999999999842 2345667788888899998876221
Q ss_pred --cccc--cccceEeccCCCCCCCHHHHHHHHHHHcCC
Q 043385 279 --LSED--KINQILPIGGPGKALTPLEQGEILFRLLGK 312 (405)
Q Consensus 279 --~~~~--~~~~~y~i~~~g~~~t~~ela~~l~~~~g~ 312 (405)
...+ ..+++|||++. +.+|+.|+++.+.+.++.
T Consensus 248 ~~~~~~~~~~~~~yni~~g-~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 248 SATTNDLASKNKVYNVAVG-DRTSLNELYYLIRDGLNL 284 (348)
T ss_pred HHhcccccCCCCEEEecCC-CcEeHHHHHHHHHHHhCc
Confidence 1111 25689999985 899999999999999874
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-32 Score=267.79 Aligned_cols=275 Identities=15% Similarity=0.147 Sum_probs=197.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC-------C------CchhHhhh--ccCCcEEEEcCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG-------R------NDKEETLN--QLQGASVCFSDVT 146 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-------~------~~~~~~~~--~~~~v~~~~~Dl~ 146 (405)
..++|+||||||+||||++|+++|+++|++|++++|....... . ...+..+. ...+++++.+|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 4577899999999999999999999999999998864321100 0 00000000 1136899999999
Q ss_pred CHHHHHHHHHhhCCCccEEEEcccccCCC--------CcchhHhHHHHHHHHHHHHHhcCCC-EEEEEccccccC-----
Q 043385 147 NLESLEKSLENLGTSIDVVVSCLASRSGG--------VKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAICVQK----- 212 (405)
Q Consensus 147 d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~--------~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~~~~~----- 212 (405)
|.+.+.+++++ .++|+|||+|+..... +...+++|+.|+.+++++|++.+++ +||++||..+|.
T Consensus 124 d~~~v~~~l~~--~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~ 201 (442)
T PLN02572 124 DFEFLSEAFKS--FEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNID 201 (442)
T ss_pred CHHHHHHHHHh--CCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCC
Confidence 99999999986 2589999998753211 1234689999999999999999986 999999998773
Q ss_pred ----------------------CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----------------
Q 043385 213 ----------------------PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG----------------- 253 (405)
Q Consensus 213 ----------------------~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------------- 253 (405)
|.++|+.+|.++|.+++.++. .+|++++++||+++|||..
T Consensus 202 ~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~-~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~ 280 (442)
T PLN02572 202 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCK-AWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDG 280 (442)
T ss_pred CcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHH-hcCCCEEEEecccccCCCCcccccccccccccCccc
Confidence 125799999999999988776 5799999999999999852
Q ss_pred -------HHHHHHHhCCCeEEecCCeeeehhhc-------------cccccc--ceEeccCCCCCCCHHHHHHHHHHH--
Q 043385 254 -------GQVELVKEGKPYVMFGDGKLCAYCVL-------------SEDKIN--QILPIGGPGKALTPLEQGEILFRL-- 309 (405)
Q Consensus 254 -------~~~~~~~~g~~~~~~g~g~~~~~~~~-------------~~~~~~--~~y~i~~~g~~~t~~ela~~l~~~-- 309 (405)
.++..+..|+++.++|+|.+.+++++ .....+ .+||+++ +.+++.|+++.+.+.
T Consensus 281 ~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs--~~~si~el~~~i~~~~~ 358 (442)
T PLN02572 281 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT--EQFSVNELAKLVTKAGE 358 (442)
T ss_pred chhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC--CceeHHHHHHHHHHHHH
Confidence 12344556888888999998773222 111223 4899986 579999999999999
Q ss_pred -cCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHH
Q 043385 310 -LGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFER 388 (405)
Q Consensus 310 -~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~ 388 (405)
+|.+..+...|.+. ... .......|.++++ .|||.|.+..++++|.+.+
T Consensus 359 ~~g~~~~~~~~p~~~------------------------~~~-----~~~~~~~d~~k~~-~LGw~p~~~~~~l~~~l~~ 408 (442)
T PLN02572 359 KLGLDVEVISVPNPR------------------------VEA-----EEHYYNAKHTKLC-ELGLEPHLLSDSLLDSLLN 408 (442)
T ss_pred hhCCCCCeeeCCCCc------------------------ccc-----cccccCccHHHHH-HcCCCCCCcHHHHHHHHHH
Confidence 88776655444320 000 0011224566665 4899998866666665555
Q ss_pred Hhh
Q 043385 389 VLR 391 (405)
Q Consensus 389 ~~~ 391 (405)
.+.
T Consensus 409 ~~~ 411 (442)
T PLN02572 409 FAV 411 (442)
T ss_pred HHH
Confidence 543
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-32 Score=265.26 Aligned_cols=225 Identities=16% Similarity=0.214 Sum_probs=172.6
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
...+.|+|||||||||||++|+++|+++ |++|++++|+.++....... ......++++++.+|++|.+.+.+++++
T Consensus 10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~-~~~~~~~~~~~~~~Dl~d~~~l~~~~~~-- 86 (386)
T PLN02427 10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEP-DTVPWSGRIQFHRINIKHDSRLEGLIKM-- 86 (386)
T ss_pred CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcc-ccccCCCCeEEEEcCCCChHHHHHHhhc--
Confidence 3456689999999999999999999998 59999999876543110000 0001113689999999999999999998
Q ss_pred CCccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC---------------------
Q 043385 160 TSIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP--------------------- 213 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~--------------------- 213 (405)
+|+|||+|+.... ...+.+..|+.++.+++++|++.+ ++|||+||..+|..
T Consensus 87 --~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~ 163 (386)
T PLN02427 87 --ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVL 163 (386)
T ss_pred --CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccc
Confidence 9999999986432 223456789999999999999887 89999999877631
Q ss_pred ---------------ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH------------------HHHHHH
Q 043385 214 ---------------LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG------------------QVELVK 260 (405)
Q Consensus 214 ---------------~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~------------------~~~~~~ 260 (405)
.+.|+.+|..+|+++..++. ..+++++++||++||||... ++..+.
T Consensus 164 ~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (386)
T PLN02427 164 KEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGA-ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 242 (386)
T ss_pred cccccccccCCCCccccchHHHHHHHHHHHHHHHh-hcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHh
Confidence 13699999999999988765 57999999999999998521 224455
Q ss_pred hCCCeEEecCCeeeehh-------------hcccc-cccceEeccCCCCCCCHHHHHHHHHHHcCC
Q 043385 261 EGKPYVMFGDGKLCAYC-------------VLSED-KINQILPIGGPGKALTPLEQGEILFRLLGK 312 (405)
Q Consensus 261 ~g~~~~~~g~g~~~~~~-------------~~~~~-~~~~~y~i~~~g~~~t~~ela~~l~~~~g~ 312 (405)
.++++.++++|.+.+++ +..+. ..+++||++++++.+++.|+++.+.+.+|.
T Consensus 243 ~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 243 RREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred cCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence 78888888888766521 22222 346799999742489999999999999884
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-32 Score=260.75 Aligned_cols=218 Identities=18% Similarity=0.303 Sum_probs=172.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCC-CHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT-NLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~l~~~~~~~~~~~ 162 (405)
+|+|||||||||||++|+++|+++ |++|++++|+..+. ..+...++++++.+|+. +.+.+.+++++ +
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~-------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~ 69 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRL-------GDLVNHPRMHFFEGDITINKEWIEYHVKK----C 69 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHH-------HHhccCCCeEEEeCCCCCCHHHHHHHHcC----C
Confidence 368999999999999999999987 69999999865432 11222246899999997 77778888887 9
Q ss_pred cEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------------CChh
Q 043385 163 DVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------------PLLE 216 (405)
Q Consensus 163 d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------------~~~~ 216 (405)
|+|||+|+... .++...+++|+.++.+++++|++.+ ++|||+||..+|. |.+.
T Consensus 70 d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~ 148 (347)
T PRK11908 70 DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWI 148 (347)
T ss_pred CEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccch
Confidence 99999998542 2345578999999999999999988 7999999987762 1236
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch---------------HHHHHHHhCCCeEEecCCeeeehhh---
Q 043385 217 FQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG---------------GQVELVKEGKPYVMFGDGKLCAYCV--- 278 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~---------------~~~~~~~~g~~~~~~g~g~~~~~~~--- 278 (405)
|+.+|.++|++++.++. ..+++++++||+.+|||.. .++..+..++++.++++|.+.++++
T Consensus 149 Y~~sK~~~e~~~~~~~~-~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~ 227 (347)
T PRK11908 149 YACSKQLMDRVIWAYGM-EEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDID 227 (347)
T ss_pred HHHHHHHHHHHHHHHHH-HcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHH
Confidence 99999999999998875 5799999999999999852 2345566788888888888766222
Q ss_pred ----------cccc--cccceEeccCCCCCCCHHHHHHHHHHHcCCCCC
Q 043385 279 ----------LSED--KINQILPIGGPGKALTPLEQGEILFRLLGKEPK 315 (405)
Q Consensus 279 ----------~~~~--~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~ 315 (405)
..++ ..+++||+++++..+|+.|+++.+.+.+|..+.
T Consensus 228 D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~ 276 (347)
T PRK11908 228 DGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPE 276 (347)
T ss_pred HHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCccc
Confidence 2222 347899999853479999999999999986443
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-32 Score=252.24 Aligned_cols=222 Identities=25% Similarity=0.374 Sum_probs=176.9
Q ss_pred EEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEE
Q 043385 89 LVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVV 166 (405)
Q Consensus 89 lVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv 166 (405)
|||||+||||++|+++|+++| ++|+++++.+.... ..........+++.+|++|++++.+++++ +|+||
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~-----~~~~~~~~~~~~~~~Di~d~~~l~~a~~g----~d~V~ 71 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF-----LKDLQKSGVKEYIQGDITDPESLEEALEG----VDVVF 71 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc-----chhhhcccceeEEEeccccHHHHHHHhcC----CceEE
Confidence 699999999999999999999 79999998775431 01223333344999999999999999999 99999
Q ss_pred EcccccCC----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------------CChhHHHHHH
Q 043385 167 SCLASRSG----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------------PLLEFQRAKL 222 (405)
Q Consensus 167 ~~a~~~~~----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------------~~~~y~~sK~ 222 (405)
|+|+.... ..+.++++|+.||+|++++|++.+|+||||+||.+++. +.+.|+.||.
T Consensus 72 H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~ 151 (280)
T PF01073_consen 72 HTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKA 151 (280)
T ss_pred EeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHH
Confidence 99997543 24458999999999999999999999999999998751 2347999999
Q ss_pred HHHHHHHHHhh----hcCCceEEEEecCCcccCchH-----HHHHHHhCCCeEEecCCeeee----------------hh
Q 043385 223 KFEAEMMKVAE----EDSGFTYSIVRPTAFFKSLGG-----QVELVKEGKPYVMFGDGKLCA----------------YC 277 (405)
Q Consensus 223 ~~E~~~~~~~~----~~~gi~~~ilRp~~v~g~~~~-----~~~~~~~g~~~~~~g~g~~~~----------------~~ 277 (405)
.+|+++.+... ....+.+++|||+.||||... +...+..|.....+|++.... ..
T Consensus 152 ~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~ 231 (280)
T PF01073_consen 152 LAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQA 231 (280)
T ss_pred HHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHH
Confidence 99999998653 123599999999999999643 456666776677788776543 11
Q ss_pred hc----ccccccceEeccCCCCCCC-HHHHHHHHHHHcCCCCCe-eecC
Q 043385 278 VL----SEDKINQILPIGGPGKALT-PLEQGEILFRLLGKEPKF-LKVP 320 (405)
Q Consensus 278 ~~----~~~~~~~~y~i~~~g~~~t-~~ela~~l~~~~g~~~~~-~~~p 320 (405)
+. .+...|+.|+|++. +++. +.|+...+.+.+|.+.+. +++|
T Consensus 232 L~~~~~~~~~~G~~y~itd~-~p~~~~~~f~~~~~~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 232 LLEPGKPERVAGQAYFITDG-EPVPSFWDFMRPLWEALGYPPPKSISLP 279 (280)
T ss_pred hccccccccCCCcEEEEECC-CccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence 11 13467899999985 8999 999999999999998665 6666
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=259.84 Aligned_cols=263 Identities=18% Similarity=0.207 Sum_probs=196.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|+|||||||||||+++++.|+++||+|++++|...... .. ....++++.+|++|.+.+.+++++ +|
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~--~~~~~~~~~~Dl~d~~~~~~~~~~----~D 87 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SE--DMFCHEFHLVDLRVMENCLKVTKG----VD 87 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------cc--ccccceEEECCCCCHHHHHHHHhC----CC
Confidence 4689999999999999999999999999999999653211 00 011367889999999999988887 99
Q ss_pred EEEEcccccC------CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------------CChhH
Q 043385 164 VVVSCLASRS------GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------------PLLEF 217 (405)
Q Consensus 164 ~Vv~~a~~~~------~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------------~~~~y 217 (405)
+|||+|+... ......+..|+.++.+++++|++.++++|||+||..+|. |.+.|
T Consensus 88 ~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Y 167 (370)
T PLN02695 88 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAY 167 (370)
T ss_pred EEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHH
Confidence 9999998542 123345778999999999999999999999999987652 33579
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----------HHHHHHHh-CCCeEEecCCeeeehhhc------
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----------GQVELVKE-GKPYVMFGDGKLCAYCVL------ 279 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----------~~~~~~~~-g~~~~~~g~g~~~~~~~~------ 279 (405)
+.+|..+|++++.++. ..+++++++||+++|||.. .++..+.. +.++.++++|.+.+++++
T Consensus 168 g~sK~~~E~~~~~~~~-~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ 246 (370)
T PLN02695 168 GLEKLATEELCKHYTK-DFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVE 246 (370)
T ss_pred HHHHHHHHHHHHHHHH-HhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHH
Confidence 9999999999988765 5799999999999999853 23343333 567778899887762221
Q ss_pred -----ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhh
Q 043385 280 -----SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYY 354 (405)
Q Consensus 280 -----~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (405)
.....+++||++++ +.+|+.|+++.+.+..|.+.++...|... +.
T Consensus 247 ai~~~~~~~~~~~~nv~~~-~~~s~~el~~~i~~~~g~~~~i~~~~~~~------------------------~~----- 296 (370)
T PLN02695 247 GVLRLTKSDFREPVNIGSD-EMVSMNEMAEIALSFENKKLPIKHIPGPE------------------------GV----- 296 (370)
T ss_pred HHHHHHhccCCCceEecCC-CceeHHHHHHHHHHHhCCCCCceecCCCC------------------------Cc-----
Confidence 11224679999985 89999999999999999766655444210 00
Q ss_pred hhhhhcccCccccccccccCCccch----hhHHHHHHHHhhc
Q 043385 355 AAESMLILDPETGEYSAEKTPSYGK----DTLEEFFERVLRE 392 (405)
Q Consensus 355 ~~~~~~~~d~~~~~~~lg~~P~~~~----~~l~~~~~~~~~~ 392 (405)
.....|.++++..+||.|.++. ..+.+|+++....
T Consensus 297 ---~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~~~~~ 335 (370)
T PLN02695 297 ---RGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQIEK 335 (370)
T ss_pred ---cccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 0011477788889999997643 2334455555543
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=250.02 Aligned_cols=291 Identities=18% Similarity=0.240 Sum_probs=226.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhh--ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLN--QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++.+++||||+||+|++|+++|++++ .+|++++..+....-. .... ....++.+++|+.|...+..++++
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~----~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~-- 76 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLP----AELTGFRSGRVTVILGDLLDANSISNAFQG-- 76 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccc----hhhhcccCCceeEEecchhhhhhhhhhccC--
Confidence 46789999999999999999999998 8999999887522100 1111 135789999999999999999998
Q ss_pred CCccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-----------------CCChhH
Q 043385 160 TSIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ-----------------KPLLEF 217 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~-----------------~~~~~y 217 (405)
+ .|+|||+.... +.+..+++|+.||++++++|++.|++++||+||.++. ...++|
T Consensus 77 --~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y 153 (361)
T KOG1430|consen 77 --A-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPY 153 (361)
T ss_pred --c-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCcccccccc
Confidence 8 77887775422 3556889999999999999999999999999999884 123589
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----HHHHHHHhCCCeEEecCCeeee-----------------
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----GQVELVKEGKPYVMFGDGKLCA----------------- 275 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----~~~~~~~~g~~~~~~g~g~~~~----------------- 275 (405)
+.+|+.+|+++++.+. ..++..++|||..||||+. .....++.|......|++....
T Consensus 154 ~~sKa~aE~~Vl~an~-~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~ 232 (361)
T KOG1430|consen 154 GESKALAEKLVLEANG-SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAAR 232 (361)
T ss_pred chHHHHHHHHHHHhcC-CCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHH
Confidence 9999999999999774 4679999999999999974 3567788888888888774433
Q ss_pred hhh-cccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCC-eeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhh
Q 043385 276 YCV-LSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPK-FLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRY 353 (405)
Q Consensus 276 ~~~-~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (405)
.+. ..+...|++|+|.++ +++..-++...+.+.+|...+ .+..|.++....+.+.++...++........ ..+.
T Consensus 233 aL~~~~~~~~Gq~yfI~d~-~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt---~~~v 308 (361)
T KOG1430|consen 233 ALLDKSPSVNGQFYFITDD-TPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILT---RFRV 308 (361)
T ss_pred HHHhcCCccCceEEEEeCC-CcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcC---hhhe
Confidence 111 245577999999985 888888888899999999877 8889999999999999998887764222222 2222
Q ss_pred hhhhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 354 YAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 354 ~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
........++..+++++||+.| ..++++++++.+.
T Consensus 309 ~~~~~~~~f~~~kA~~~lgY~P---~~~~~e~~~~~~~ 343 (361)
T KOG1430|consen 309 ALLGVTRTFSIEKAKRELGYKP---LVSLEEAIQRTIH 343 (361)
T ss_pred eeeccccccCHHHHHHhhCCCC---cCCHHHHHHHHHH
Confidence 3333455588999999999999 4455555555543
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-31 Score=256.01 Aligned_cols=224 Identities=17% Similarity=0.191 Sum_probs=171.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
++|||||||||||++++++|+++|++|+++.++....... ..........+++++.+|++|.+++.+++++ .++|+|
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~D~V 78 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNL-MSLAPVAQSERFAFEKVDICDRAELARVFTE--HQPDCV 78 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccch-hhhhhcccCCceEEEECCCcChHHHHHHHhh--cCCCEE
Confidence 6899999999999999999999998755444332211100 0001111123578899999999999999986 358999
Q ss_pred EEcccccCC-----CCcchhHhHHHHHHHHHHHHHh---------cCCCEEEEEccccccC----------------CCh
Q 043385 166 VSCLASRSG-----GVKDSWKIDYEANRNSLVAGRN---------CGASHFVLLSAICVQK----------------PLL 215 (405)
Q Consensus 166 v~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~---------~~v~~~V~~Ss~~~~~----------------~~~ 215 (405)
|||||.... .+...+++|+.|+.+++++|++ .++++||++||.++|. |.+
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s 158 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSS 158 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCC
Confidence 999986532 3456889999999999999986 3578999999977652 346
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeeehhhc---------
Q 043385 216 EFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCAYCVL--------- 279 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~~~~~--------- 279 (405)
.|+.+|.++|.+++.++. +.+++++++||+++|||.. .++..+..+.++.++|+|++.+++++
T Consensus 159 ~Y~~sK~~~e~~~~~~~~-~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~ 237 (355)
T PRK10217 159 PYSASKASSDHLVRAWLR-TYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALY 237 (355)
T ss_pred hhHHHHHHHHHHHHHHHH-HhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHH
Confidence 799999999999998866 5799999999999999874 23455566778888899988772222
Q ss_pred ---ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCC
Q 043385 280 ---SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEP 314 (405)
Q Consensus 280 ---~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~ 314 (405)
.....+++|||+++ +.+|+.|+++.+.+.+|+..
T Consensus 238 ~~~~~~~~~~~yni~~~-~~~s~~~~~~~i~~~~~~~~ 274 (355)
T PRK10217 238 CVATTGKVGETYNIGGH-NERKNLDVVETICELLEELA 274 (355)
T ss_pred HHHhcCCCCCeEEeCCC-CcccHHHHHHHHHHHhcccc
Confidence 22335689999986 89999999999999998643
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-31 Score=275.53 Aligned_cols=284 Identities=18% Similarity=0.241 Sum_probs=199.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHH-HHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLES-LEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-l~~~~~~~~~ 160 (405)
-.+|+|||||||||||++|+++|+++ ||+|++++|..... ......++++++.+|++|.+. +.+++++
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~-------~~~~~~~~~~~~~gDl~d~~~~l~~~l~~--- 382 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI-------SRFLGHPRFHFVEGDISIHSEWIEYHIKK--- 382 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh-------hhhcCCCceEEEeccccCcHHHHHHHhcC---
Confidence 35689999999999999999999986 79999999976432 112222478999999998765 5777887
Q ss_pred CccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-----------------C----C
Q 043385 161 SIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-----------------P----L 214 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-----------------~----~ 214 (405)
+|+|||+|+.... .+.+.+++|+.++.+++++|++.+ ++|||+||..+|. | .
T Consensus 383 -~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~ 460 (660)
T PRK08125 383 -CDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQR 460 (660)
T ss_pred -CCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCc
Confidence 9999999986432 234578899999999999999998 8999999987762 1 1
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch---------------HHHHHHHhCCCeEEecCCeeeehhh-
Q 043385 215 LEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG---------------GQVELVKEGKPYVMFGDGKLCAYCV- 278 (405)
Q Consensus 215 ~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~---------------~~~~~~~~g~~~~~~g~g~~~~~~~- 278 (405)
+.|+.+|..+|++++.++. .++++++++||+++|||.. .++..+..++++.++|+|.+.++++
T Consensus 461 s~Yg~sK~~~E~~~~~~~~-~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~ 539 (660)
T PRK08125 461 WIYSVSKQLLDRVIWAYGE-KEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTD 539 (660)
T ss_pred cchHHHHHHHHHHHHHHHH-hcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceee
Confidence 3599999999999998875 4799999999999999852 2345566688888889988777221
Q ss_pred ------------cccc--cccceEeccCCCC-CCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhh
Q 043385 279 ------------LSED--KINQILPIGGPGK-ALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLED 343 (405)
Q Consensus 279 ------------~~~~--~~~~~y~i~~~g~-~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 343 (405)
.... ..+++||++++ + .+|+.|+++.+.+.+|.+.....+|....... ...
T Consensus 540 v~Dva~a~~~~l~~~~~~~~g~iyni~~~-~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~-------------~~~ 605 (660)
T PRK08125 540 IRDGIEALFRIIENKDNRCDGQIINIGNP-DNEASIRELAEMLLASFEKHPLRDHFPPFAGFRV-------------VES 605 (660)
T ss_pred HHHHHHHHHHHHhccccccCCeEEEcCCC-CCceeHHHHHHHHHHHhccCcccccCCccccccc-------------ccc
Confidence 1111 24679999984 4 79999999999999996533333333210000 000
Q ss_pred hhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhhccchhhcc
Q 043385 344 AAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQEL 399 (405)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~~~~~~~~~ 399 (405)
....+.. +.......+|.+++++.|||.|.+ ++++-+++.++.-+..-++
T Consensus 606 ~~~~~~~---~~~~~~~~~d~~ka~~~LGw~P~~---~lee~l~~~i~~~~~~~~~ 655 (660)
T PRK08125 606 SSYYGKG---YQDVEHRKPSIRNARRLLDWEPKI---DMQETIDETLDFFLRTVDL 655 (660)
T ss_pred ccccccc---cccccccCCChHHHHHHhCCCCCC---cHHHHHHHHHHHHHhcccc
Confidence 0000000 001112236888899999999954 5555555555433333333
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.7e-31 Score=259.58 Aligned_cols=251 Identities=21% Similarity=0.220 Sum_probs=187.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.+.|+|||||||||||++|+++|+++|++|++++|...... .........++++++.+|+.+.. +.+ +
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~---~~~~~~~~~~~~~~~~~Di~~~~-----~~~----~ 185 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRK---ENLVHLFGNPRFELIRHDVVEPI-----LLE----V 185 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccH---hHhhhhccCCceEEEECcccccc-----ccC----C
Confidence 34589999999999999999999999999999998643211 00011112246788999987653 345 9
Q ss_pred cEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC----------------C---ChhHH
Q 043385 163 DVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK----------------P---LLEFQ 218 (405)
Q Consensus 163 d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~----------------~---~~~y~ 218 (405)
|+|||+|+... .+....+++|+.|+.+++++|++.++ +||++||.++|. | .+.|+
T Consensus 186 D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg 264 (436)
T PLN02166 186 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYD 264 (436)
T ss_pred CEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchH
Confidence 99999998543 23345788999999999999999886 899999998872 1 24599
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch---------HHHHHHHhCCCeEEecCCeeeehhhcc---------
Q 043385 219 RAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG---------GQVELVKEGKPYVMFGDGKLCAYCVLS--------- 280 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~---------~~~~~~~~g~~~~~~g~g~~~~~~~~~--------- 280 (405)
.+|..+|++++.+++ ..+++++++||+++|||.. .++..+..+.++.++|+|.+.+++++.
T Consensus 265 ~SK~~aE~~~~~y~~-~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~ 343 (436)
T PLN02166 265 EGKRTAETLAMDYHR-GAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVA 343 (436)
T ss_pred HHHHHHHHHHHHHHH-HhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHH
Confidence 999999999998876 5789999999999999851 345667778888889999876622211
Q ss_pred --cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhh
Q 043385 281 --EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAES 358 (405)
Q Consensus 281 --~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (405)
+...+++||++++ +.+|+.|+++.+.+.+|.+..+...|... .. ..
T Consensus 344 ~~~~~~~giyNIgs~-~~~Si~ela~~I~~~~g~~~~i~~~p~~~------------------------~~-------~~ 391 (436)
T PLN02166 344 LMEGEHVGPFNLGNP-GEFTMLELAEVVKETIDSSATIEFKPNTA------------------------DD-------PH 391 (436)
T ss_pred HHhcCCCceEEeCCC-CcEeHHHHHHHHHHHhCCCCCeeeCCCCC------------------------CC-------cc
Confidence 1223579999986 89999999999999999766554333210 00 01
Q ss_pred hcccCccccccccccCCccch
Q 043385 359 MLILDPETGEYSAEKTPSYGK 379 (405)
Q Consensus 359 ~~~~d~~~~~~~lg~~P~~~~ 379 (405)
....|.++++.++||+|++..
T Consensus 392 ~~~~d~~Ka~~~LGw~P~~sl 412 (436)
T PLN02166 392 KRKPDISKAKELLNWEPKISL 412 (436)
T ss_pred ccccCHHHHHHHcCCCCCCCH
Confidence 123577888889999996644
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-30 Score=244.60 Aligned_cols=283 Identities=19% Similarity=0.231 Sum_probs=206.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|+||||+||||+++++.|+++|++|++++|++++.. .... .+++++.+|+.|.+++.+++++ +|+|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~-~~~~~~~~D~~~~~~l~~~~~~----~d~v 68 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR-------NLEG-LDVEIVEGDLRDPASLRKAVAG----CRAL 68 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccc-------cccc-CCceEEEeeCCCHHHHHHHHhC----CCEE
Confidence 57999999999999999999999999999999876431 1111 2688999999999999999998 9999
Q ss_pred EEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC------------------ChhHHHHHHHH
Q 043385 166 VSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP------------------LLEFQRAKLKF 224 (405)
Q Consensus 166 v~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~------------------~~~y~~sK~~~ 224 (405)
||+|+... ..+...+++|+.++.++++++++.++++||++||..+|.+ ...|+.+|..+
T Consensus 69 i~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~ 148 (328)
T TIGR03466 69 FHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLA 148 (328)
T ss_pred EEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHH
Confidence 99997542 2345678999999999999999999999999999887632 24699999999
Q ss_pred HHHHHHHhhhcCCceEEEEecCCcccCchH-------HHHHHHhCCCeEEecCCeeee---hh------hcccccccceE
Q 043385 225 EAEMMKVAEEDSGFTYSIVRPTAFFKSLGG-------QVELVKEGKPYVMFGDGKLCA---YC------VLSEDKINQIL 288 (405)
Q Consensus 225 E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~-------~~~~~~~g~~~~~~g~g~~~~---~~------~~~~~~~~~~y 288 (405)
|++++.++. ..+++++++||+.+||+... ++.....+......+.+.... ++ +......++.|
T Consensus 149 e~~~~~~~~-~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~ 227 (328)
T TIGR03466 149 EQAALEMAA-EKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGERY 227 (328)
T ss_pred HHHHHHHHH-hcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCceE
Confidence 999998876 46999999999999998532 222222233222223222211 11 11223456788
Q ss_pred eccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccc
Q 043385 289 PIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGE 368 (405)
Q Consensus 289 ~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 368 (405)
++++ +.+++.|+++.+.+.+|++.....+|.+.....+.+.+.+..+..... .... ...++ ......+|.++++
T Consensus 228 ~~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~--~~~~~~~d~~k~~ 301 (328)
T TIGR03466 228 ILGG--ENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEP-RVTV-DGVRM--AKKKMFFSSAKAV 301 (328)
T ss_pred EecC--CCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCC-CCCH-HHHHH--HhccCCCChHHHH
Confidence 8864 789999999999999999888888999887777666655554432111 0000 00011 1133457899999
Q ss_pred cccccCCccchhhHHHHHHHHhh
Q 043385 369 YSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 369 ~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
..|||+| .++++.+++.+.
T Consensus 302 ~~lg~~p----~~~~~~i~~~~~ 320 (328)
T TIGR03466 302 RELGYRQ----RPAREALRDAVE 320 (328)
T ss_pred HHcCCCC----cCHHHHHHHHHH
Confidence 9999999 366666666544
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=246.52 Aligned_cols=247 Identities=20% Similarity=0.203 Sum_probs=180.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||+||||++|+++|+++| +|++++|... .+.+|++|.+.+.+++++ .++|+|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~--~~~D~V 58 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRK--IRPDVI 58 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHh--cCCCEE
Confidence 589999999999999999999999 7999987532 235899999999999986 248999
Q ss_pred EEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------------CCChhHHHHHHHHHH
Q 043385 166 VSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------------KPLLEFQRAKLKFEA 226 (405)
Q Consensus 166 v~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------------~~~~~y~~sK~~~E~ 226 (405)
||||+.... ++...+++|+.++.+++++|++.|+ +|||+||..+| .|.+.|+.+|..+|+
T Consensus 59 ih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~ 137 (299)
T PRK09987 59 VNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEK 137 (299)
T ss_pred EECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHH
Confidence 999997643 2234568999999999999999986 79999998776 355789999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCch-----HHHHHHHhCCCeEEecC--Ceeee-----h-hh------cccccccce
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSLG-----GQVELVKEGKPYVMFGD--GKLCA-----Y-CV------LSEDKINQI 287 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~~-----~~~~~~~~g~~~~~~g~--g~~~~-----~-~~------~~~~~~~~~ 287 (405)
+++.+ ..+++++||+++|||.. .++..+.+++++.++++ |.+.+ + ++ ......+++
T Consensus 138 ~~~~~-----~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~gi 212 (299)
T PRK09987 138 ALQEH-----CAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGL 212 (299)
T ss_pred HHHHh-----CCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCe
Confidence 99874 44679999999999852 34555667888888887 55443 1 11 111123479
Q ss_pred EeccCCCCCCCHHHHHHHHHHHc---CCCC---CeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcc
Q 043385 288 LPIGGPGKALTPLEQGEILFRLL---GKEP---KFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLI 361 (405)
Q Consensus 288 y~i~~~g~~~t~~ela~~l~~~~---g~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (405)
||++++ +.+|+.|+++.+.+.+ |.+. .+.+++..... . . ..+. ....
T Consensus 213 yni~~~-~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~--------------~---~--~~rp-------~~~~ 265 (299)
T PRK09987 213 YHLVAS-GTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYP--------------T---P--ARRP-------HNSR 265 (299)
T ss_pred EEeeCC-CCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcC--------------C---C--CCCC-------Cccc
Confidence 999986 8999999999998864 4332 23344332100 0 0 0000 1224
Q ss_pred cCccccccccccCCccchhhHHHHHHHHhh
Q 043385 362 LDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 362 ~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
+|.++++..+||+| .++++-++++++
T Consensus 266 ld~~k~~~~lg~~~----~~~~~~l~~~~~ 291 (299)
T PRK09987 266 LNTEKFQQNFALVL----PDWQVGVKRMLT 291 (299)
T ss_pred CCHHHHHHHhCCCC----ccHHHHHHHHHH
Confidence 67888888999998 366666655554
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-30 Score=253.98 Aligned_cols=251 Identities=20% Similarity=0.206 Sum_probs=187.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.++|+|||||||||||++|+++|+++|++|++++|....... ........++++++.+|+.++. +.+ +
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~---~~~~~~~~~~~~~i~~D~~~~~-----l~~----~ 184 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKE---NVMHHFSNPNFELIRHDVVEPI-----LLE----V 184 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhhhhccCCceEEEECCccChh-----hcC----C
Confidence 456899999999999999999999999999999876432110 0001111246888999987753 345 9
Q ss_pred cEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC----------------C---ChhHH
Q 043385 163 DVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK----------------P---LLEFQ 218 (405)
Q Consensus 163 d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~----------------~---~~~y~ 218 (405)
|+|||+|+... .++...+++|+.++.+++++|++.++ +|||+||..+|. | .+.|+
T Consensus 185 D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~ 263 (442)
T PLN02206 185 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYD 263 (442)
T ss_pred CEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHH
Confidence 99999998542 13445788999999999999999986 899999998872 2 24699
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch---------HHHHHHHhCCCeEEecCCeeeehhhcc---------
Q 043385 219 RAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG---------GQVELVKEGKPYVMFGDGKLCAYCVLS--------- 280 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~---------~~~~~~~~g~~~~~~g~g~~~~~~~~~--------- 280 (405)
.+|..+|+++..+.. ..+++++++||+++|||.. .++..+..++++.++|+|.+.+++++.
T Consensus 264 ~SK~~aE~~~~~y~~-~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~ 342 (442)
T PLN02206 264 EGKRTAETLTMDYHR-GANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMR 342 (442)
T ss_pred HHHHHHHHHHHHHHH-HhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHH
Confidence 999999999988765 5799999999999999851 245566678888889999876622111
Q ss_pred --cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhh
Q 043385 281 --EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAES 358 (405)
Q Consensus 281 --~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (405)
....+++|||+++ +.+|+.|+++.+.+.+|.+..+...|... .+ ..
T Consensus 343 a~e~~~~g~yNIgs~-~~~sl~Elae~i~~~~g~~~~i~~~p~~~------------------~~-------------~~ 390 (442)
T PLN02206 343 LMEGEHVGPFNLGNP-GEFTMLELAKVVQETIDPNAKIEFRPNTE------------------DD-------------PH 390 (442)
T ss_pred HHhcCCCceEEEcCC-CceeHHHHHHHHHHHhCCCCceeeCCCCC------------------CC-------------cc
Confidence 1223569999986 79999999999999998766554433210 00 00
Q ss_pred hcccCccccccccccCCccch
Q 043385 359 MLILDPETGEYSAEKTPSYGK 379 (405)
Q Consensus 359 ~~~~d~~~~~~~lg~~P~~~~ 379 (405)
....|.++++.++||+|.+..
T Consensus 391 ~~~~d~sKa~~~LGw~P~~~l 411 (442)
T PLN02206 391 KRKPDITKAKELLGWEPKVSL 411 (442)
T ss_pred ccccCHHHHHHHcCCCCCCCH
Confidence 112577888899999997654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=247.44 Aligned_cols=223 Identities=17% Similarity=0.141 Sum_probs=170.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh------ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN------QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~------~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
|+||||||+||||++|+++|+++|++|++++|+...... . ....+. ...+++++.+|++|.+.+.+++++.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNT-Q-RIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccch-h-hhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-
Confidence 589999999999999999999999999999998643110 0 001110 0136899999999999999999962
Q ss_pred CCccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCC---EEEEEccccccC--------------CChhH
Q 043385 160 TSIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGAS---HFVLLSAICVQK--------------PLLEF 217 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~---~~V~~Ss~~~~~--------------~~~~y 217 (405)
++|+|||+|+.... .....+++|+.|+.+++++|++.+++ +|||+||..+|. |.++|
T Consensus 78 -~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y 156 (343)
T TIGR01472 78 -KPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPY 156 (343)
T ss_pred -CCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChh
Confidence 47999999996432 22345678999999999999998864 899999988762 45789
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH----------HHHHHHhCCC-eEEecCCeeeehhhccc-----
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG----------QVELVKEGKP-YVMFGDGKLCAYCVLSE----- 281 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~----------~~~~~~~g~~-~~~~g~g~~~~~~~~~~----- 281 (405)
+.+|.++|.+++.++. ..++++++.|+.++|||... ++..+..+.+ ...+|+|.+.+++++.+
T Consensus 157 ~~sK~~~e~~~~~~~~-~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a 235 (343)
T TIGR01472 157 AAAKLYAHWITVNYRE-AYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEA 235 (343)
T ss_pred HHHHHHHHHHHHHHHH-HhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHH
Confidence 9999999999998876 46899999999999987421 2334455653 44568888777332211
Q ss_pred ------ccccceEeccCCCCCCCHHHHHHHHHHHcCCCC
Q 043385 282 ------DKINQILPIGGPGKALTPLEQGEILFRLLGKEP 314 (405)
Q Consensus 282 ------~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~ 314 (405)
...+++|||++. +.+|+.|+++.+.+.+|++.
T Consensus 236 ~~~~~~~~~~~~yni~~g-~~~s~~e~~~~i~~~~g~~~ 273 (343)
T TIGR01472 236 MWLMLQQDKPDDYVIATG-ETHSVREFVEVSFEYIGKTL 273 (343)
T ss_pred HHHHHhcCCCccEEecCC-CceeHHHHHHHHHHHcCCCc
Confidence 112468999985 89999999999999999754
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-30 Score=246.31 Aligned_cols=263 Identities=21% Similarity=0.209 Sum_probs=190.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh--ccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN--QLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+++++|+|||||||||++++++|+++|++|++++|................ ...+++++.+|++|++.+.+++++ .
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~--~ 80 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS--T 80 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh--C
Confidence 457899999999999999999999999999999976432210000001111 123688999999999999999875 2
Q ss_pred CccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHH
Q 043385 161 SIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAK 221 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK 221 (405)
++|+|||+|+.... .+...+++|+.++.+++++|++.++++||++||.++|. |.+.|+.+|
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK 160 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTK 160 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHH
Confidence 58999999986431 33457899999999999999999999999999987762 456799999
Q ss_pred HHHHHHHHHHhhhcCCceEEEEecCCcccCch----------------HHHHHHHhCC--CeEEec------CCeeee--
Q 043385 222 LKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG----------------GQVELVKEGK--PYVMFG------DGKLCA-- 275 (405)
Q Consensus 222 ~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------------~~~~~~~~g~--~~~~~g------~g~~~~-- 275 (405)
.++|++++.++....+++++++|++++||+.. .++..+..++ .+.++| +|.+.+
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 240 (352)
T PLN02240 161 LFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDY 240 (352)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEee
Confidence 99999999876534679999999999998521 1334444443 344554 566555
Q ss_pred ----hh-------hc----ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccc
Q 043385 276 ----YC-------VL----SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPS 340 (405)
Q Consensus 276 ----~~-------~~----~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 340 (405)
|+ +. .+...+++||++++ +.+|++|+++.+.+.+|.+.++...+.+.
T Consensus 241 i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~~----------------- 302 (352)
T PLN02240 241 IHVMDLADGHIAALRKLFTDPDIGCEAYNLGTG-KGTSVLEMVAAFEKASGKKIPLKLAPRRP----------------- 302 (352)
T ss_pred EEHHHHHHHHHHHHhhhhhccCCCCceEEccCC-CcEeHHHHHHHHHHHhCCCCCceeCCCCC-----------------
Confidence 21 11 12234589999986 89999999999999999876665544210
Q ss_pred hhhhhhhhhhhhhhhhhhhcccCccccccccccCCccch
Q 043385 341 LEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGK 379 (405)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~ 379 (405)
+.. ..+..|.++++.+|||+|.+..
T Consensus 303 -------~~~-------~~~~~d~~k~~~~lg~~p~~~l 327 (352)
T PLN02240 303 -------GDA-------EEVYASTEKAEKELGWKAKYGI 327 (352)
T ss_pred -------CCh-------hhhhcCHHHHHHHhCCCCCCCH
Confidence 000 1122477888889999996543
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=226.49 Aligned_cols=266 Identities=22% Similarity=0.278 Sum_probs=205.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+++|+||||.||||+|||+.|..+||.|++++.-..+.. .........+.++.+.-|+..+ ++.+ +
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k---~n~~~~~~~~~fel~~hdv~~p-----l~~e----v 92 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRK---ENLEHWIGHPNFELIRHDVVEP-----LLKE----V 92 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccch---hhcchhccCcceeEEEeechhH-----HHHH----h
Confidence 45689999999999999999999999999999998654421 1112233346788888887665 6777 9
Q ss_pred cEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-------------------CCChhHH
Q 043385 163 DVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ-------------------KPLLEFQ 218 (405)
Q Consensus 163 d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~-------------------~~~~~y~ 218 (405)
|.|||+|++..+ .+...+.+|+.++.+++..|++.+ +||++.||..+| .|.+.|.
T Consensus 93 D~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cyd 171 (350)
T KOG1429|consen 93 DQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYD 171 (350)
T ss_pred hhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhh
Confidence 999999997653 445677899999999999999988 799999999998 2445699
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch---------HHHHHHHhCCCeEEecCCeeee------hhhc----
Q 043385 219 RAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG---------GQVELVKEGKPYVMFGDGKLCA------YCVL---- 279 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~---------~~~~~~~~g~~~~~~g~g~~~~------~~~~---- 279 (405)
..|..+|.+...+.+ +.|+.+.|.|+.+.|||.. .|+.+..++.++.++|+|.|.+ ++++
T Consensus 172 egKr~aE~L~~~y~k-~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~ 250 (350)
T KOG1429|consen 172 EGKRVAETLCYAYHK-QEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLR 250 (350)
T ss_pred HHHHHHHHHHHHhhc-ccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHH
Confidence 999999999999988 7899999999999999853 4678888999999999999998 2221
Q ss_pred -ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhh
Q 043385 280 -SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAES 358 (405)
Q Consensus 280 -~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (405)
-+....+-+||++| +.+|+.|+|+++.+..|-...+...+.. .++. .
T Consensus 251 Lm~s~~~~pvNiGnp-~e~Tm~elAemv~~~~~~~s~i~~~~~~------------------~Ddp-------------~ 298 (350)
T KOG1429|consen 251 LMESDYRGPVNIGNP-GEFTMLELAEMVKELIGPVSEIEFVENG------------------PDDP-------------R 298 (350)
T ss_pred HhcCCCcCCcccCCc-cceeHHHHHHHHHHHcCCCcceeecCCC------------------CCCc-------------c
Confidence 12233445999999 6999999999999998755444433221 0010 1
Q ss_pred hcccCccccccccccCCcc----chhhHHHHHHHHhhccc
Q 043385 359 MLILDPETGEYSAEKTPSY----GKDTLEEFFERVLREGM 394 (405)
Q Consensus 359 ~~~~d~~~~~~~lg~~P~~----~~~~l~~~~~~~~~~~~ 394 (405)
.-.-|.+++++.|||.|.+ |+..+..|+++.+....
T Consensus 299 kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~~i~~~~ 338 (350)
T KOG1429|consen 299 KRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRERIAREK 338 (350)
T ss_pred ccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHHHHHHHH
Confidence 1124677888999999977 44557778888777554
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=243.89 Aligned_cols=222 Identities=14% Similarity=0.096 Sum_probs=169.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|+||||||+||||+++++.|+++|++|++++|+....... ...+....+++++.+|++|.+.+.+++++ .++|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~~d 77 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNL---FELLNLAKKIEDHFGDIRDAAKLRKAIAE--FKPE 77 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhH---HHHHhhcCCceEEEccCCCHHHHHHHHhh--cCCC
Confidence 568999999999999999999999999999999987543211 01111123577899999999999999987 2479
Q ss_pred EEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcC-CCEEEEEcccccc---------------CCChhHHHHHH
Q 043385 164 VVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQ---------------KPLLEFQRAKL 222 (405)
Q Consensus 164 ~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~---------------~~~~~y~~sK~ 222 (405)
+|||+|+... .++...+++|+.++.++++++++.+ +++||++||..+| .|.++|+.+|.
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~ 157 (349)
T TIGR02622 78 IVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKA 157 (349)
T ss_pred EEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHH
Confidence 9999998532 2344578999999999999999887 7899999997665 23467999999
Q ss_pred HHHHHHHHHhhhc------CCceEEEEecCCcccCch--------HHHHHHHhCCCeEEecCCeeeehhhccc-------
Q 043385 223 KFEAEMMKVAEED------SGFTYSIVRPTAFFKSLG--------GQVELVKEGKPYVMFGDGKLCAYCVLSE------- 281 (405)
Q Consensus 223 ~~E~~~~~~~~~~------~gi~~~ilRp~~v~g~~~--------~~~~~~~~g~~~~~~g~g~~~~~~~~~~------- 281 (405)
.+|.+++.++.+. .+++++++||+.+|||.. .++..+..|.++. +++|.+.+++++.+
T Consensus 158 ~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~-~~~g~~~rd~i~v~D~a~a~~ 236 (349)
T TIGR02622 158 CAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVI-IRNPDATRPWQHVLEPLSGYL 236 (349)
T ss_pred HHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeE-ECCCCcccceeeHHHHHHHHH
Confidence 9999998876521 389999999999999852 2345555676665 56677666222211
Q ss_pred ----------ccccceEeccCC-CCCCCHHHHHHHHHHHcC
Q 043385 282 ----------DKINQILPIGGP-GKALTPLEQGEILFRLLG 311 (405)
Q Consensus 282 ----------~~~~~~y~i~~~-g~~~t~~ela~~l~~~~g 311 (405)
...+++|||++. ++.++..|+++.+.+.++
T Consensus 237 ~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 237 LLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred HHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence 123579999862 368999999999988765
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=242.59 Aligned_cols=219 Identities=17% Similarity=0.218 Sum_probs=165.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.++|+||||||+||||++++++|+++|++|++++|+.+.... .....+.. ..+++++.+|++|.+.+.+++++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 81 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKN--THLRELEGGKERLILCKADLQDYEALKAAIDG---- 81 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhH--HHHHHhhCCCCcEEEEecCcCChHHHHHHHhc----
Confidence 456899999999999999999999999999999998654210 00011111 13578899999999999999998
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc-ccC-----------------------CChhH
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC-VQK-----------------------PLLEF 217 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~-~~~-----------------------~~~~y 217 (405)
+|+|||+|+....++.+.+++|+.++.+++++|++.+++|||++||.+ +|. |.+.|
T Consensus 82 ~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y 161 (342)
T PLN02214 82 CDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWY 161 (342)
T ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHH
Confidence 999999999876666778999999999999999999999999999963 541 22469
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH--------HHHHHHhCCCeEEecCCeeee----hh------hc
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG--------QVELVKEGKPYVMFGDGKLCA----YC------VL 279 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~--------~~~~~~~g~~~~~~g~g~~~~----~~------~~ 279 (405)
+.+|..+|+++..++. ..|++++++||+++|||... .+..+..+... ..+++...+ |+ +.
T Consensus 162 ~~sK~~aE~~~~~~~~-~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~i~V~Dva~a~~~al 239 (342)
T PLN02214 162 CYGKMVAEQAAWETAK-EKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAK-TYANLTQAYVDVRDVALAHVLVY 239 (342)
T ss_pred HHHHHHHHHHHHHHHH-HcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-cCCCCCcCeeEHHHHHHHHHHHH
Confidence 9999999999998876 46999999999999998531 11122334432 233322111 11 11
Q ss_pred ccccccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 280 SEDKINQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 280 ~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
.....++.||+++ ..+++.|+++.+.+.++
T Consensus 240 ~~~~~~g~yn~~~--~~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 240 EAPSASGRYLLAE--SARHRGEVVEILAKLFP 269 (342)
T ss_pred hCcccCCcEEEec--CCCCHHHHHHHHHHHCC
Confidence 2223457999986 47899999999999985
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=243.70 Aligned_cols=222 Identities=18% Similarity=0.224 Sum_probs=169.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
|+|||||||||||++++++|+++|++ |+++++...... ......+....+++++.+|++|.+++.+++++ .++|+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~d~ 76 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGN--LESLADVSDSERYVFEHADICDRAELDRIFAQ--HQPDA 76 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccch--HHHHHhcccCCceEEEEecCCCHHHHHHHHHh--cCCCE
Confidence 58999999999999999999999975 555655321110 00001111123578899999999999999985 35899
Q ss_pred EEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhc---------CCCEEEEEccccccC------------------
Q 043385 165 VVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNC---------GASHFVLLSAICVQK------------------ 212 (405)
Q Consensus 165 Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~---------~v~~~V~~Ss~~~~~------------------ 212 (405)
|||+|+.... .+...+++|+.|+.+++++|++. ++++||++||..+|.
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~ 156 (352)
T PRK10084 77 VMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFT 156 (352)
T ss_pred EEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcc
Confidence 9999986431 34568999999999999999874 467999999976653
Q ss_pred ------CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeeehhh-
Q 043385 213 ------PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCAYCV- 278 (405)
Q Consensus 213 ------~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~~~~- 278 (405)
|.+.|+.+|..+|.+++.++. ..+++++++||+.+|||.. .++..+..+.++.++++|++.++++
T Consensus 157 E~~~~~p~~~Y~~sK~~~E~~~~~~~~-~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~ 235 (352)
T PRK10084 157 ETTAYAPSSPYSASKASSDHLVRAWLR-TYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLY 235 (352)
T ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHH-HhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEE
Confidence 346799999999999998866 4799999999999999863 2334556677788888888776221
Q ss_pred -----------cccccccceEeccCCCCCCCHHHHHHHHHHHcCCC
Q 043385 279 -----------LSEDKINQILPIGGPGKALTPLEQGEILFRLLGKE 313 (405)
Q Consensus 279 -----------~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~ 313 (405)
......+++||++++ +.+++.|+++.+++.+|..
T Consensus 236 v~D~a~a~~~~l~~~~~~~~yni~~~-~~~s~~~~~~~i~~~~~~~ 280 (352)
T PRK10084 236 VEDHARALYKVVTEGKAGETYNIGGH-NEKKNLDVVLTICDLLDEI 280 (352)
T ss_pred HHHHHHHHHHHHhcCCCCceEEeCCC-CcCcHHHHHHHHHHHhccc
Confidence 223345789999986 8999999999999999864
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=241.18 Aligned_cols=258 Identities=16% Similarity=0.221 Sum_probs=184.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|||||||||||+++++.|+++|++|++++|................ ..++.++.+|++|++.+.++++. .++|+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~--~~~d~v 77 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALLTEILHD--HAIDTV 77 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhc-CCCceEEEccCCCHHHHHHHHhc--CCCCEE
Confidence 589999999999999999999999999999876433211100001111 13567889999999999998874 359999
Q ss_pred EEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---------------CCChhHHHHHHHHH
Q 043385 166 VSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---------------KPLLEFQRAKLKFE 225 (405)
Q Consensus 166 v~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---------------~~~~~y~~sK~~~E 225 (405)
||+|+.... ...+.+++|+.++.+++++|++.++++||++||.++| .|.+.|+.+|..+|
T Consensus 78 vh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E 157 (338)
T PRK10675 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVE 157 (338)
T ss_pred EECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHH
Confidence 999986532 2345788999999999999999999999999998776 24578999999999
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCc-------------hH---HHHHHHhCC--CeEEec------CCeeee------
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSL-------------GG---QVELVKEGK--PYVMFG------DGKLCA------ 275 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~-------------~~---~~~~~~~g~--~~~~~g------~g~~~~------ 275 (405)
++++.++.+..+++++++|++.+||+. .. ++..+..++ ++.++| +|.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~ 237 (338)
T PRK10675 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_pred HHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHH
Confidence 999988653358999999998888852 11 223333332 344444 565554
Q ss_pred hh-------hcc--cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhh
Q 043385 276 YC-------VLS--EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAE 346 (405)
Q Consensus 276 ~~-------~~~--~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (405)
|+ +.. ....+++||++++ +.+|+.|+++.+.+.+|++.++...|....
T Consensus 238 D~a~~~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---------------------- 294 (338)
T PRK10675 238 DLADGHVAAMEKLANKPGVHIYNLGAG-VGSSVLDVVNAFSKACGKPVNYHFAPRREG---------------------- 294 (338)
T ss_pred HHHHHHHHHHHhhhccCCCceEEecCC-CceeHHHHHHHHHHHhCCCCCeeeCCCCCC----------------------
Confidence 22 111 1123579999986 899999999999999998766654443100
Q ss_pred hhhhhhhhhhhhhcccCccccccccccCCccc
Q 043385 347 FGKIGRYYAAESMLILDPETGEYSAEKTPSYG 378 (405)
Q Consensus 347 ~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~ 378 (405)
.. .....|.++++..+||+|.+.
T Consensus 295 --~~-------~~~~~~~~k~~~~lg~~p~~~ 317 (338)
T PRK10675 295 --DL-------PAYWADASKADRELNWRVTRT 317 (338)
T ss_pred --ch-------hhhhcCHHHHHHHhCCCCcCc
Confidence 00 011247788888999999654
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=263.66 Aligned_cols=226 Identities=18% Similarity=0.256 Sum_probs=176.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
.++|+|||||||||||++|+++|+++ |++|++++|...... . .........++++++.+|++|.+.+..++.. .
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~-~-~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~ 79 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSN-L-KNLNPSKSSPNFKFVKGDIASADLVNYLLIT--E 79 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccch-h-hhhhhcccCCCeEEEECCCCChHHHHHHHhh--c
Confidence 45689999999999999999999998 689999988531110 0 0001111224789999999999988877643 2
Q ss_pred CccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcC-CCEEEEEccccccC-----------------CChhH
Q 043385 161 SIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQK-----------------PLLEF 217 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~~-----------------~~~~y 217 (405)
++|+|||+|+.... +..+.+++|+.++.+++++|++.+ +++|||+||..+|. |.++|
T Consensus 80 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y 159 (668)
T PLN02260 80 GIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPY 159 (668)
T ss_pred CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCc
Confidence 49999999997542 233577899999999999999987 89999999987762 34679
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeeehh------------h
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCAYC------------V 278 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~~~------------~ 278 (405)
+.+|..+|.+++.++. ..+++++++||++||||.. .++..+..++++.++|+|.+.+.+ +
T Consensus 160 ~~sK~~aE~~v~~~~~-~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~ 238 (668)
T PLN02260 160 SATKAGAEMLVMAYGR-SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVV 238 (668)
T ss_pred HHHHHHHHHHHHHHHH-HcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHH
Confidence 9999999999998775 4799999999999999863 244566678888888988876511 1
Q ss_pred cccccccceEeccCCCCCCCHHHHHHHHHHHcCCCC
Q 043385 279 LSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEP 314 (405)
Q Consensus 279 ~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~ 314 (405)
......+++||++++ +.+++.|+++.+.+.+|.+.
T Consensus 239 l~~~~~~~vyni~~~-~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 239 LHKGEVGHVYNIGTK-KERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred HhcCCCCCEEEECCC-CeeEHHHHHHHHHHHhCCCC
Confidence 223345789999986 89999999999999999754
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-29 Score=237.77 Aligned_cols=266 Identities=21% Similarity=0.246 Sum_probs=193.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 87 NILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+||||||+||++++++|+++| ++|++++|...... ..........++++++.+|++|++++.+++++ .++|+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~~d~ 76 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGN--LENLADLEDNPRYRFVKGDIGDRELVSRLFTE--HQPDA 76 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchh--hhhhhhhccCCCcEEEEcCCcCHHHHHHHHhh--cCCCE
Confidence 58999999999999999999987 78999887432111 00111122224688999999999999999986 25899
Q ss_pred EEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEccccccC---------------CChhHHHHHHH
Q 043385 165 VVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAICVQK---------------PLLEFQRAKLK 223 (405)
Q Consensus 165 Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~~~~~---------------~~~~y~~sK~~ 223 (405)
|||+|+.... .+...+++|+.++.+++++|++.+.+ ++|++||..+|. |.+.|+.+|..
T Consensus 77 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~ 156 (317)
T TIGR01181 77 VVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAA 156 (317)
T ss_pred EEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHH
Confidence 9999986532 34457889999999999999987544 899999987762 33469999999
Q ss_pred HHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeeehh------------hcccccc
Q 043385 224 FEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCAYC------------VLSEDKI 284 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~~~------------~~~~~~~ 284 (405)
+|.+++.++. ..+++++++||+.+|||.. .++..+..++++.++++|.+.+++ +......
T Consensus 157 ~e~~~~~~~~-~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~ 235 (317)
T TIGR01181 157 SDHLVRAYHR-TYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRV 235 (317)
T ss_pred HHHHHHHHHH-HhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCC
Confidence 9999998765 4799999999999999852 234566678788888888765511 1223445
Q ss_pred cceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCc
Q 043385 285 NQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDP 364 (405)
Q Consensus 285 ~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 364 (405)
+++||++++ +.+++.|+++.+.+.+|.+........ .. .+ .......|.
T Consensus 236 ~~~~~~~~~-~~~s~~~~~~~i~~~~~~~~~~~~~~~------------------~~-----~~-------~~~~~~~~~ 284 (317)
T TIGR01181 236 GETYNIGGG-NERTNLEVVETILELLGKDEDLITHVE------------------DR-----PG-------HDRRYAIDA 284 (317)
T ss_pred CceEEeCCC-CceeHHHHHHHHHHHhCCCcccccccC------------------CC-----cc-------chhhhcCCH
Confidence 689999986 899999999999999997533211100 00 00 001123567
Q ss_pred cccccccccCCccchhhHHHHHHHHhh
Q 043385 365 ETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 365 ~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
++.+..+||.|.+ ++++.+++.++
T Consensus 285 ~k~~~~lG~~p~~---~~~~~i~~~~~ 308 (317)
T TIGR01181 285 SKIKRELGWAPKY---TFEEGLRKTVQ 308 (317)
T ss_pred HHHHHHhCCCCCC---cHHHHHHHHHH
Confidence 7788889999954 46666666654
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=245.08 Aligned_cols=216 Identities=19% Similarity=0.258 Sum_probs=164.0
Q ss_pred CCCCeEEEE----cCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCc----hhHhhhccCCcEEEEcCCCCHHHHHHH
Q 043385 83 PKDINILVV----GSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRND----KEETLNQLQGASVCFSDVTNLESLEKS 154 (405)
Q Consensus 83 ~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~----~~~~~~~~~~v~~~~~Dl~d~~~l~~~ 154 (405)
.++++|||| |||||||++|+++|+++||+|++++|+......... ....+.. .+++++.+|+.| +.++
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~v~~v~~D~~d---~~~~ 125 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS-AGVKTVWGDPAD---VKSK 125 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh-cCceEEEecHHH---HHhh
Confidence 445789999 999999999999999999999999998754211100 0011111 368999999877 4444
Q ss_pred HHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCC-----------hhHHHHHHH
Q 043385 155 LENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPL-----------LEFQRAKLK 223 (405)
Q Consensus 155 ~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~-----------~~y~~sK~~ 223 (405)
+.. .++|+|||+++. +..++++++++|++.|++||||+||.++|.+. .++. +|.+
T Consensus 126 ~~~--~~~d~Vi~~~~~-----------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~ 191 (378)
T PLN00016 126 VAG--AGFDVVYDNNGK-----------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLE 191 (378)
T ss_pred hcc--CCccEEEeCCCC-----------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHH
Confidence 432 249999998752 35678999999999999999999999988421 1222 7999
Q ss_pred HHHHHHHHhhhcCCceEEEEecCCcccCch------HHHHHHHhCCCeEEecCCeeee-------------hhhcccccc
Q 043385 224 FEAEMMKVAEEDSGFTYSIVRPTAFFKSLG------GQVELVKEGKPYVMFGDGKLCA-------------YCVLSEDKI 284 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~------~~~~~~~~g~~~~~~g~g~~~~-------------~~~~~~~~~ 284 (405)
+|+++++ .+++++++||+++|||.. .++..+..++++.++++|.+.+ .++..+...
T Consensus 192 ~E~~l~~-----~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~ 266 (378)
T PLN00016 192 VEAYLQK-----LGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAA 266 (378)
T ss_pred HHHHHHH-----cCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcccc
Confidence 9998865 789999999999999852 3456777888888888887655 122233456
Q ss_pred cceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChH
Q 043385 285 NQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIG 322 (405)
Q Consensus 285 ~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~ 322 (405)
+++||++++ +.+|+.|+++.+.+.+|.+.+++.++.+
T Consensus 267 ~~~yni~~~-~~~s~~el~~~i~~~~g~~~~i~~~~~~ 303 (378)
T PLN00016 267 GQIFNIVSD-RAVTFDGMAKACAKAAGFPEEIVHYDPK 303 (378)
T ss_pred CCEEEecCC-CccCHHHHHHHHHHHhCCCCceeecCcc
Confidence 789999986 8999999999999999998776665543
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=240.67 Aligned_cols=226 Identities=18% Similarity=0.153 Sum_probs=172.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-----hccCCcEEEEcCCCCHHHHHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-----NQLQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-----~~~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
+.++|+||||||+||||++++++|+++|++|++++|.+...... ....+ ....+++++.+|++|.+.+.++++
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 80 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQ--RLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLD 80 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeccccccccc--chhhhccccccccCceEEEEecCCCHHHHHHHHH
Confidence 34578999999999999999999999999999999976432100 00111 011358899999999999999998
Q ss_pred hhCCCccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCC-----EEEEEccccccC-------------C
Q 043385 157 NLGTSIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGAS-----HFVLLSAICVQK-------------P 213 (405)
Q Consensus 157 ~~~~~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~-----~~V~~Ss~~~~~-------------~ 213 (405)
.+ ++|+|||||+.... .+...+++|+.|+.+++++|++.+++ +||++||..+|. |
T Consensus 81 ~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p 158 (340)
T PLN02653 81 DI--KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHP 158 (340)
T ss_pred Hc--CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCC
Confidence 62 47999999997432 23446789999999999999998875 899999987773 4
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH----------HHHHHHhCCCeE-EecCCeeeehhhccc-
Q 043385 214 LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG----------QVELVKEGKPYV-MFGDGKLCAYCVLSE- 281 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~----------~~~~~~~g~~~~-~~g~g~~~~~~~~~~- 281 (405)
.+.|+.+|.++|.+++.++. ..+++++..|+.++|||... ++..+..+.+.. ..|+|.+.+++++.+
T Consensus 159 ~~~Y~~sK~~~e~~~~~~~~-~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D 237 (340)
T PLN02653 159 RSPYAVAKVAAHWYTVNYRE-AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGD 237 (340)
T ss_pred CChhHHHHHHHHHHHHHHHH-HcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHH
Confidence 56799999999999998876 57899999999999987421 123444666554 458888777333211
Q ss_pred ----------ccccceEeccCCCCCCCHHHHHHHHHHHcCCC
Q 043385 282 ----------DKINQILPIGGPGKALTPLEQGEILFRLLGKE 313 (405)
Q Consensus 282 ----------~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~ 313 (405)
...++.||+++. +.+|+.|+++.+.+.+|.+
T Consensus 238 ~a~a~~~~~~~~~~~~yni~~g-~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 238 YVEAMWLMLQQEKPDDYVVATE-ESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred HHHHHHHHHhcCCCCcEEecCC-CceeHHHHHHHHHHHcCCC
Confidence 112578999985 8999999999999999864
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-29 Score=238.28 Aligned_cols=222 Identities=17% Similarity=0.214 Sum_probs=162.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.++++||||||+||||++|+++|+++|++|++++|+........ ....+...++++++.+|++|.+.+.+++++ +
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~ 81 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRALQELGDLKIFGADLTDEESFEAPIAG----C 81 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHhcCCCCceEEEEcCCCChHHHHHHHhc----C
Confidence 45689999999999999999999999999999999865321000 001111123588999999999999999987 9
Q ss_pred cEEEEcccccCCC---C-cchhHhHHHHHHHHHHHHHhc-CCCEEEEEccccccC-------------------------
Q 043385 163 DVVVSCLASRSGG---V-KDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQK------------------------- 212 (405)
Q Consensus 163 d~Vv~~a~~~~~~---~-~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~~------------------------- 212 (405)
|+|||+|+..... . ...+++|+.++.++++++.+. ++++||++||..+|.
T Consensus 82 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~ 161 (338)
T PLN00198 82 DLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSE 161 (338)
T ss_pred CEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhc
Confidence 9999999864321 1 235689999999999999886 589999999987663
Q ss_pred --CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH--------HHHHHHhCCCeEEec-CCeee----e--
Q 043385 213 --PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG--------QVELVKEGKPYVMFG-DGKLC----A-- 275 (405)
Q Consensus 213 --~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~--------~~~~~~~g~~~~~~g-~g~~~----~-- 275 (405)
|.++|+.+|..+|.+++.++. ..+++++++||+++|||... ++..+..+.++.+.| ++.+. +
T Consensus 162 ~~p~~~Y~~sK~~~E~~~~~~~~-~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 240 (338)
T PLN00198 162 KPPTWGYPASKTLAEKAAWKFAE-ENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISI 240 (338)
T ss_pred CCccchhHHHHHHHHHHHHHHHH-hcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcce
Confidence 245699999999999998876 57999999999999998521 122344565555544 22221 1
Q ss_pred ----hh------hcccccccceEeccCCCCCCCHHHHHHHHHHHcCC
Q 043385 276 ----YC------VLSEDKINQILPIGGPGKALTPLEQGEILFRLLGK 312 (405)
Q Consensus 276 ----~~------~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~ 312 (405)
|+ +......++.|+.++ ..+++.|+++.+.+.++.
T Consensus 241 i~V~D~a~a~~~~~~~~~~~~~~~~~~--~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 241 THVEDVCRAHIFLAEKESASGRYICCA--ANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred eEHHHHHHHHHHHhhCcCcCCcEEEec--CCCCHHHHHHHHHHHCCC
Confidence 11 111222345785554 678999999999988753
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-29 Score=236.20 Aligned_cols=216 Identities=19% Similarity=0.227 Sum_probs=165.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++|+||||||+||||++++++|+++| ++|++++|+..+... ...... ..+++++.+|++|++.+.+++++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~---~~~~~~-~~~~~~v~~Dl~d~~~l~~~~~~---- 74 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE---MQQKFP-APCLRFFIGDVRDKERLTRALRG---- 74 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH---HHHHhC-CCcEEEEEccCCCHHHHHHHHhc----
Confidence 56899999999999999999999986 789999987643210 001111 14688999999999999999987
Q ss_pred ccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhh--h
Q 043385 162 IDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAE--E 234 (405)
Q Consensus 162 ~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~--~ 234 (405)
+|+|||+||.... ++.+.+++|+.|+.+++++|++.++++||++||.....|.++|+.+|..+|.+++.++. .
T Consensus 75 iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p~~~Y~~sK~~~E~l~~~~~~~~~ 154 (324)
T TIGR03589 75 VDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANPINLYGATKLASDKLFVAANNISG 154 (324)
T ss_pred CCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999986432 23457899999999999999999999999999998888999999999999999887543 1
Q ss_pred cCCceEEEEecCCcccCchH----HHHHHHhCC-CeEEecCCeeeehhhc------------ccccccceEeccCCCCCC
Q 043385 235 DSGFTYSIVRPTAFFKSLGG----QVELVKEGK-PYVMFGDGKLCAYCVL------------SEDKINQILPIGGPGKAL 297 (405)
Q Consensus 235 ~~gi~~~ilRp~~v~g~~~~----~~~~~~~g~-~~~~~g~g~~~~~~~~------------~~~~~~~~y~i~~~g~~~ 297 (405)
..|++++++|||++|||... +...+..+. +++ ++++.+.+++++ .....+++|+.. +..+
T Consensus 155 ~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~-i~~~~~~r~~i~v~D~a~a~~~al~~~~~~~~~~~~--~~~~ 231 (324)
T TIGR03589 155 SKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELP-ITDPRMTRFWITLEQGVNFVLKSLERMLGGEIFVPK--IPSM 231 (324)
T ss_pred ccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCee-eCCCCceEeeEEHHHHHHHHHHHHhhCCCCCEEccC--CCcE
Confidence 47999999999999998543 334444565 344 445655542111 112245678533 3679
Q ss_pred CHHHHHHHHHHHc
Q 043385 298 TPLEQGEILFRLL 310 (405)
Q Consensus 298 t~~ela~~l~~~~ 310 (405)
++.|+++.+.+..
T Consensus 232 sv~el~~~i~~~~ 244 (324)
T TIGR03589 232 KITDLAEAMAPEC 244 (324)
T ss_pred EHHHHHHHHHhhC
Confidence 9999999998864
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=235.59 Aligned_cols=218 Identities=17% Similarity=0.198 Sum_probs=161.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+++|||||||||||++++++|+++|++|++++|+..+...............+++++.+|++|++.+.+++++ +|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~d 79 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG----CD 79 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC----CC
Confidence 46899999999999999999999999999999998764321000000001123689999999999999999998 99
Q ss_pred EEEEcccccCC---CC-cchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccccc--C-----------------------C
Q 043385 164 VVVSCLASRSG---GV-KDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQ--K-----------------------P 213 (405)
Q Consensus 164 ~Vv~~a~~~~~---~~-~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~--~-----------------------~ 213 (405)
+|||+|+.... +. .+.+++|+.|+.+++++|++. +++|||++||.+++ . +
T Consensus 80 ~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~ 159 (322)
T PLN02986 80 AVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRET 159 (322)
T ss_pred EEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcc
Confidence 99999996532 12 246789999999999999986 79999999998643 1 1
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch--------HHHHHHHhCCCeEEecCCe--eee--------
Q 043385 214 LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG--------GQVELVKEGKPYVMFGDGK--LCA-------- 275 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~--------~~~~~~~~g~~~~~~g~g~--~~~-------- 275 (405)
.+.|+.+|..+|.++..+.+ +.+++++++||+.+|||.. .++..+..+.+. ++... ...
T Consensus 160 ~~~Y~~sK~~aE~~~~~~~~-~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~v~v~Dva~a~ 236 (322)
T PLN02986 160 KNWYPLSKILAENAAWEFAK-DNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FNNRFYRFVDVRDVALAH 236 (322)
T ss_pred ccchHHHHHHHHHHHHHHHH-HhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CCCcCcceeEHHHHHHHH
Confidence 24599999999999998876 5699999999999999852 123344445543 23211 111
Q ss_pred -hhhcccccccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 276 -YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 276 -~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
.++..+ ..++.||+++ +.+|+.|+++.+.+.++
T Consensus 237 ~~al~~~-~~~~~yni~~--~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 237 IKALETP-SANGRYIIDG--PIMSVNDIIDILRELFP 270 (322)
T ss_pred HHHhcCc-ccCCcEEEec--CCCCHHHHHHHHHHHCC
Confidence 122223 2345899965 58999999999999986
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=221.84 Aligned_cols=224 Identities=19% Similarity=0.248 Sum_probs=183.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.++|+||||.||||++.+..+..+ .+..+.++.-.--.. ...++.....++.+++.+|+.|...+.-.+.. +++
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~--~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~--~~i 81 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN--LKNLEPVRNSPNYKFVEGDIADADLVLYLFET--EEI 81 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc--cchhhhhccCCCceEeeccccchHHHHhhhcc--Cch
Confidence 478999999999999999999987 356666554221111 22234444557899999999999988888876 579
Q ss_pred cEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccccc---------------CCChhHHHHH
Q 043385 163 DVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQ---------------KPLLEFQRAK 221 (405)
Q Consensus 163 d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~---------------~~~~~y~~sK 221 (405)
|.|+|.|+.... +.-+....|+.++..++++++.. ++++|||+||..+| .|.++|+++|
T Consensus 82 d~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasK 161 (331)
T KOG0747|consen 82 DTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASK 161 (331)
T ss_pred hhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHH
Confidence 999999997542 34456778999999999999998 58999999999998 4778999999
Q ss_pred HHHHHHHHHHhhhcCCceEEEEecCCcccCc-------hHHHHHHHhCCCeEEecCCeeee------------hhhcccc
Q 043385 222 LKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL-------GGQVELVKEGKPYVMFGDGKLCA------------YCVLSED 282 (405)
Q Consensus 222 ~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~-------~~~~~~~~~g~~~~~~g~g~~~~------------~~~~~~~ 282 (405)
+++|..++++.. +++++++++|.++||||. ..|+.+..++++.++.|+|.+.+ .++....
T Consensus 162 aAaE~~v~Sy~~-sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg 240 (331)
T KOG0747|consen 162 AAAEMLVRSYGR-SYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKG 240 (331)
T ss_pred HHHHHHHHHHhh-ccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcC
Confidence 999999999987 799999999999999985 45778888899999999999988 2222345
Q ss_pred cccceEeccCCCCCCCHHHHHHHHHHHcCCCC
Q 043385 283 KINQILPIGGPGKALTPLEQGEILFRLLGKEP 314 (405)
Q Consensus 283 ~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~ 314 (405)
..|++|||+.+ .+.+..|+++.+.+..++..
T Consensus 241 ~~geIYNIgtd-~e~~~~~l~k~i~eli~~~~ 271 (331)
T KOG0747|consen 241 ELGEIYNIGTD-DEMRVIDLAKDICELFEKRL 271 (331)
T ss_pred CccceeeccCc-chhhHHHHHHHHHHHHHHhc
Confidence 56999999997 89999999999999887643
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=233.35 Aligned_cols=219 Identities=16% Similarity=0.189 Sum_probs=160.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
++++|||||||||||++++++|+++|++|++++|+........ ...... ..++++++.+|+.|++.+.+++++ +
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~ 77 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVVDG----C 77 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHHcC----C
Confidence 3589999999999999999999999999999999865421100 000011 124688999999999999999998 9
Q ss_pred cEEEEcccccCC---CC-cchhHhHHHHHHHHHHHHHhc-CCCEEEEEccccc--cC-----------------C-----
Q 043385 163 DVVVSCLASRSG---GV-KDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICV--QK-----------------P----- 213 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~-~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~--~~-----------------~----- 213 (405)
|+|||+|+.... .. ...+++|+.++.+++++|++. +++||||+||.++ |. |
T Consensus 78 d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~ 157 (322)
T PLN02662 78 EGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEE 157 (322)
T ss_pred CEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhc
Confidence 999999986432 22 257889999999999999987 8999999999753 41 1
Q ss_pred -ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH--------HHHHHHhCCCeEEecCCe--eee--hh---
Q 043385 214 -LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG--------QVELVKEGKPYVMFGDGK--LCA--YC--- 277 (405)
Q Consensus 214 -~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~--------~~~~~~~g~~~~~~g~g~--~~~--~~--- 277 (405)
.+.|+.+|..+|++++.+.. ..+++++++||+.+|||... ++..+..+.+. .++.. ... |+
T Consensus 158 ~~~~Y~~sK~~~E~~~~~~~~-~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~a 234 (322)
T PLN02662 158 SKLWYVLSKTLAEEAAWKFAK-ENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT--FPNASYRWVDVRDVANA 234 (322)
T ss_pred ccchHHHHHHHHHHHHHHHHH-HcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc--CCCCCcCeEEHHHHHHH
Confidence 13699999999999988765 57999999999999998521 22233334332 22211 111 11
Q ss_pred ---hcccccccceEeccCCCCCCCHHHHHHHHHHHcCC
Q 043385 278 ---VLSEDKINQILPIGGPGKALTPLEQGEILFRLLGK 312 (405)
Q Consensus 278 ---~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~ 312 (405)
+......++.||+++ ..+++.|+++.+.+..+.
T Consensus 235 ~~~~~~~~~~~~~~~~~g--~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 235 HIQAFEIPSASGRYCLVE--RVVHYSEVVKILHELYPT 270 (322)
T ss_pred HHHHhcCcCcCCcEEEeC--CCCCHHHHHHHHHHHCCC
Confidence 112222345889875 689999999999998763
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=233.70 Aligned_cols=220 Identities=15% Similarity=0.182 Sum_probs=161.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.+|+||||||+||||++++++|+++|++|++++|+....... ...... ...++++++.+|++|.+.+.+++++ +
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~ 78 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKT-DHLLALDGAKERLKLFKADLLDEGSFELAIDG----C 78 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhH-HHHHhccCCCCceEEEeCCCCCchHHHHHHcC----C
Confidence 468999999999999999999999999999999887643211 000000 1113688999999999999999987 9
Q ss_pred cEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEccccccC-C----------------------
Q 043385 163 DVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQK-P---------------------- 213 (405)
Q Consensus 163 d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~~-~---------------------- 213 (405)
|+||||||.... .+...+++|+.++.+++++|.+. ++++||++||..+|. +
T Consensus 79 d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~ 158 (325)
T PLN02989 79 ETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAE 158 (325)
T ss_pred CEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhc
Confidence 999999996421 23456789999999999999885 578999999986641 1
Q ss_pred --ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch--------HHHHHHHhCCCeEEecCCeeee--h-----
Q 043385 214 --LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG--------GQVELVKEGKPYVMFGDGKLCA--Y----- 276 (405)
Q Consensus 214 --~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~--------~~~~~~~~g~~~~~~g~g~~~~--~----- 276 (405)
.+.|+.+|..+|+++..++. ..+++++++||+.+|||.. .++..+..++........+... |
T Consensus 159 ~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~ 237 (325)
T PLN02989 159 ERKQWYVLSKTLAEDAAWRFAK-DNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAH 237 (325)
T ss_pred ccccchHHHHHHHHHHHHHHHH-HcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHH
Confidence 14699999999999998776 5699999999999999852 1333344454332111111111 1
Q ss_pred --hhcccccccceEeccCCCCCCCHHHHHHHHHHHcCC
Q 043385 277 --CVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGK 312 (405)
Q Consensus 277 --~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~ 312 (405)
++..+ ..+++||+++ ..+|+.|+++.+.+.++.
T Consensus 238 ~~~l~~~-~~~~~~ni~~--~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 238 VKALETP-SANGRYIIDG--PVVTIKDIENVLREFFPD 272 (325)
T ss_pred HHHhcCc-ccCceEEEec--CCCCHHHHHHHHHHHCCC
Confidence 12222 2356899965 589999999999999863
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=229.96 Aligned_cols=250 Identities=20% Similarity=0.210 Sum_probs=183.3
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEE
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVV 166 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv 166 (405)
+|||||||||||++++++|+++|++|++++|. .+|+.|++.+.+++++ .++|+||
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~--~~~d~vi 55 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRA--IRPDAVV 55 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHh--CCCCEEE
Confidence 58999999999999999999999999999884 3799999999999987 2469999
Q ss_pred EcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHHHH
Q 043385 167 SCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFEAE 227 (405)
Q Consensus 167 ~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E~~ 227 (405)
|+|+.... .....+++|+.++.+++++|++.+. +||++||.++|. |.+.|+.+|..+|++
T Consensus 56 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~ 134 (287)
T TIGR01214 56 NTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQA 134 (287)
T ss_pred ECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHH
Confidence 99986532 2234688999999999999998885 899999987762 346799999999999
Q ss_pred HHHHhhhcCCceEEEEecCCcccCch--H----HHHHHHhCCCeEEecCCeeee-----------hhhcccccccceEec
Q 043385 228 MMKVAEEDSGFTYSIVRPTAFFKSLG--G----QVELVKEGKPYVMFGDGKLCA-----------YCVLSEDKINQILPI 290 (405)
Q Consensus 228 ~~~~~~~~~gi~~~ilRp~~v~g~~~--~----~~~~~~~g~~~~~~g~g~~~~-----------~~~~~~~~~~~~y~i 290 (405)
++. .+++++++||+++||+.. . ++..+..++++.+.++....+ .++..+...+++||+
T Consensus 135 ~~~-----~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni 209 (287)
T TIGR01214 135 IRA-----AGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHL 209 (287)
T ss_pred HHH-----hCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEE
Confidence 987 478999999999999863 2 344555666666666422111 122223356889999
Q ss_pred cCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccc
Q 043385 291 GGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYS 370 (405)
Q Consensus 291 ~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 370 (405)
+++ +.+++.|+++.+.+.+|.+....+.|.- .... .. ...... .......+|.++++..
T Consensus 210 ~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~~--~~~~--~~---~~~~~~-------------~~~~~~~~d~~~~~~~ 268 (287)
T TIGR01214 210 ANS-GQCSWYEFAQAIFEEAGADGLLLHPQEV--KPIS--SK---EYPRPA-------------RRPAYSVLDNTKLVKT 268 (287)
T ss_pred ECC-CCcCHHHHHHHHHHHhCcccccccCcee--Eeec--HH---HcCCCC-------------CCCCccccchHHHHHH
Confidence 997 7999999999999999976543232210 0000 00 000000 0012234788899999
Q ss_pred cccCCccchhhHHHHHHHHhhc
Q 043385 371 AEKTPSYGKDTLEEFFERVLRE 392 (405)
Q Consensus 371 lg~~P~~~~~~l~~~~~~~~~~ 392 (405)
+||.+ .++++.+++.+++
T Consensus 269 lg~~~----~~~~~~l~~~~~~ 286 (287)
T TIGR01214 269 LGTPL----PHWREALRAYLQE 286 (287)
T ss_pred cCCCC----ccHHHHHHHHHhh
Confidence 99955 6888888877764
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=222.67 Aligned_cols=219 Identities=17% Similarity=0.220 Sum_probs=167.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.+++|+|||||||||++|++.|+++||.|++++|++++.... ..+..++. ..+.+.+.+|+.|++++.++++| +
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~-~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g----c 79 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKT-EHLRKLEGAKERLKLFKADLLDEGSFDKAIDG----C 79 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhH-HHHHhcccCcccceEEeccccccchHHHHHhC----C
Confidence 578999999999999999999999999999999999873211 11122222 23589999999999999999999 9
Q ss_pred cEEEEcccccCCCCc----chhHhHHHHHHHHHHHHHhcC-CCEEEEEccccccCC------------------------
Q 043385 163 DVVVSCLASRSGGVK----DSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQKP------------------------ 213 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~----~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~~~------------------------ 213 (405)
|.|||+|.+...+.. +..+.++.||.|++++|++.. |+|+|++||+++-.+
T Consensus 80 dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~ 159 (327)
T KOG1502|consen 80 DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRC 159 (327)
T ss_pred CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHh
Confidence 999999998765443 688999999999999999987 999999999876411
Q ss_pred -ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH--------HHHHHHhCCCeEEecCCeeee---------
Q 043385 214 -LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG--------QVELVKEGKPYVMFGDGKLCA--------- 275 (405)
Q Consensus 214 -~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~--------~~~~~~~g~~~~~~g~g~~~~--------- 275 (405)
...|..+|..+|+...++++ +.+++.+.+.|+.|+||.-. .+..+.+|..-. ..+....+
T Consensus 160 ~~~~Y~~sK~lAEkaAw~fa~-e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~-~~n~~~~~VdVrDVA~A 237 (327)
T KOG1502|consen 160 KKLWYALSKTLAEKAAWEFAK-ENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAET-YPNFWLAFVDVRDVALA 237 (327)
T ss_pred hHHHHHHHHHHHHHHHHHHHH-hCCccEEEecCCceECCCcccccchhHHHHHHHHhccccc-CCCCceeeEeHHHHHHH
Confidence 12499999999999999998 56999999999999998521 122333342211 11222221
Q ss_pred -hhhcccccccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 276 -YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 276 -~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
.++.+....++.|.+.+ ...++.|+++.+.+.+-
T Consensus 238 Hv~a~E~~~a~GRyic~~--~~~~~~ei~~~l~~~~P 272 (327)
T KOG1502|consen 238 HVLALEKPSAKGRYICVG--EVVSIKEIADILRELFP 272 (327)
T ss_pred HHHHHcCcccCceEEEec--CcccHHHHHHHHHHhCC
Confidence 22334445568899987 46679999999998764
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-28 Score=233.73 Aligned_cols=220 Identities=14% Similarity=0.172 Sum_probs=157.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
..++||||||+||||++++++|+++|++|++++|+..................+++++.+|++|.+.+.+++++ +|
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~----~d 79 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRG----CT 79 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhC----CC
Confidence 35789999999999999999999999999999998654321100000000112578899999999999999988 99
Q ss_pred EEEEcccccCC---CC-cchhHhHHHHHHHHHHHHHhcC-CCEEEEEccccccC------C-------------------
Q 043385 164 VVVSCLASRSG---GV-KDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQK------P------------------- 213 (405)
Q Consensus 164 ~Vv~~a~~~~~---~~-~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~~------~------------------- 213 (405)
+|||+|+.... +. ...+++|+.++.+++++|++.+ ++||||+||.+++. +
T Consensus 80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~ 159 (351)
T PLN02650 80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMT 159 (351)
T ss_pred EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccc
Confidence 99999986432 22 3578999999999999999987 78999999986531 1
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch------HHHHHH--HhCCCeEEecC---Ceeee--hh---
Q 043385 214 LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG------GQVELV--KEGKPYVMFGD---GKLCA--YC--- 277 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~------~~~~~~--~~g~~~~~~g~---g~~~~--~~--- 277 (405)
.++|+.+|..+|.+++.++. .+|++++++||+++|||.. .++..+ ..+.... ++. .+... |+
T Consensus 160 ~~~Y~~sK~~~E~~~~~~~~-~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~v~V~Dva~a 237 (351)
T PLN02650 160 GWMYFVSKTLAEKAAWKYAA-ENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAH-YSIIKQGQFVHLDDLCNA 237 (351)
T ss_pred cchHHHHHHHHHHHHHHHHH-HcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccc-cCcCCCcceeeHHHHHHH
Confidence 13799999999999998876 5799999999999999852 122221 1222211 221 12222 11
Q ss_pred ---hcccccccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 278 ---VLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 278 ---~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
+......++.|++++ +.+++.|+++.+.+.++
T Consensus 238 ~~~~l~~~~~~~~~i~~~--~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 238 HIFLFEHPAAEGRYICSS--HDATIHDLAKMLREKYP 272 (351)
T ss_pred HHHHhcCcCcCceEEecC--CCcCHHHHHHHHHHhCc
Confidence 112223345785443 68999999999999876
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=237.24 Aligned_cols=224 Identities=17% Similarity=0.189 Sum_probs=167.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-------cCCcEEEEcCCCCHHHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-------LQGASVCFSDVTNLESLEKS 154 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-------~~~v~~~~~Dl~d~~~l~~~ 154 (405)
..++|+||||||+||||++++++|+++|++|++++|+.+.... +..+.. ..++.++.+|++|.+.+.++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~----l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~ 125 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEK----LREMEMFGEMGRSNDGIWTVMANLTEPESLHEA 125 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHHhhhccccccCCceEEEEcCCCCHHHHHHH
Confidence 4567899999999999999999999999999999887543210 011100 12578899999999999999
Q ss_pred HHhhCCCccEEEEcccccCCC-----CcchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccc--ccC--------------
Q 043385 155 LENLGTSIDVVVSCLASRSGG-----VKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAIC--VQK-------------- 212 (405)
Q Consensus 155 ~~~~~~~~d~Vv~~a~~~~~~-----~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~--~~~-------------- 212 (405)
+++ +|+|||+++..... .....++|+.++.+++++|++. +++||||+||.. +|.
T Consensus 126 i~~----~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~ 201 (367)
T PLN02686 126 FDG----CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEE 201 (367)
T ss_pred HHh----ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCC
Confidence 998 99999999865321 2346788999999999999986 799999999963 221
Q ss_pred ----------CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----HHHHHHHhCCCeEEecCCeeee--
Q 043385 213 ----------PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----GQVELVKEGKPYVMFGDGKLCA-- 275 (405)
Q Consensus 213 ----------~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----~~~~~~~~g~~~~~~g~g~~~~-- 275 (405)
|.++|+.+|..+|.++..++. ..|++++++||+++|||.. ..+..+..+. ..++|+|.+.+
T Consensus 202 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~-~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~-~~~~g~g~~~~v~ 279 (367)
T PLN02686 202 SWSDESFCRDNKLWYALGKLKAEKAAWRAAR-GKGLKLATICPALVTGPGFFRRNSTATIAYLKGA-QEMLADGLLATAD 279 (367)
T ss_pred CCCChhhcccccchHHHHHHHHHHHHHHHHH-hcCceEEEEcCCceECCCCCCCCChhHHHHhcCC-CccCCCCCcCeEE
Confidence 224699999999999988776 4799999999999999953 1222334443 45667766433
Q ss_pred --h-------hhcc--cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCee
Q 043385 276 --Y-------CVLS--EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFL 317 (405)
Q Consensus 276 --~-------~~~~--~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~ 317 (405)
| ++.. +...+++| +++. +.+++.|+++.+.+.+|.+....
T Consensus 280 V~Dva~A~~~al~~~~~~~~~~~y-i~~g-~~~s~~e~~~~i~~~~g~~~~~~ 330 (367)
T PLN02686 280 VERLAEAHVCVYEAMGNKTAFGRY-ICFD-HVVSREDEAEELARQIGLPINKI 330 (367)
T ss_pred HHHHHHHHHHHHhccCCCCCCCcE-EEeC-CCccHHHHHHHHHHHcCCCCCcC
Confidence 1 1221 12346688 6654 89999999999999999765543
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=228.00 Aligned_cols=262 Identities=19% Similarity=0.234 Sum_probs=184.6
Q ss_pred EEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEE
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVV 166 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv 166 (405)
|||||||||||+++++.|+++|+ +|++++|..... .+... ....+.+|+++.+.++.+.+....++|+||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--------~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~D~vv 71 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--------KFLNL-ADLVIADYIDKEDFLDRLEKGAFGKIEAIF 71 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--------hhhhh-hheeeeccCcchhHHHHHHhhccCCCCEEE
Confidence 69999999999999999999997 788887764321 11111 124567899988888776651112499999
Q ss_pred EcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHHHHHH
Q 043385 167 SCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFEAEMM 229 (405)
Q Consensus 167 ~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E~~~~ 229 (405)
|+|+... .++...+++|+.++.+++++|++.++ +||++||.++|. |.+.|+.+|..+|.+++
T Consensus 72 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~ 150 (314)
T TIGR02197 72 HQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVR 150 (314)
T ss_pred ECccccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHH
Confidence 9998643 23445788999999999999999887 899999988873 56789999999999998
Q ss_pred HHhh-hcCCceEEEEecCCcccCch-----------HHHHHHHhCCCeEEec------CCeeeehhh------------c
Q 043385 230 KVAE-EDSGFTYSIVRPTAFFKSLG-----------GQVELVKEGKPYVMFG------DGKLCAYCV------------L 279 (405)
Q Consensus 230 ~~~~-~~~gi~~~ilRp~~v~g~~~-----------~~~~~~~~g~~~~~~g------~g~~~~~~~------------~ 279 (405)
++.. +..+++++++||+.+|||.. .++..+..+.++.+++ +|.+.+.++ .
T Consensus 151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~ 230 (314)
T TIGR02197 151 RRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLL 230 (314)
T ss_pred HHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHH
Confidence 7532 13468999999999999862 1234556676666543 455544111 1
Q ss_pred ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhh
Q 043385 280 SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESM 359 (405)
Q Consensus 280 ~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (405)
.. ..+++||++++ +++|+.|+++.+.+.+|.+..+...|.+... .+.. ...
T Consensus 231 ~~-~~~~~yni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~---------------------~~~~------~~~ 281 (314)
T TIGR02197 231 EN-GVSGIFNLGTG-RARSFNDLADAVFKALGKDEKIEYIPMPEAL---------------------RGKY------QYF 281 (314)
T ss_pred hc-ccCceEEcCCC-CCccHHHHHHHHHHHhCCCCcceeccCcccc---------------------cccc------ccc
Confidence 12 45679999996 8999999999999999977543333322100 0000 011
Q ss_pred cccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 360 LILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 360 ~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
...|.++++..++|.| ..++++.+++.+.
T Consensus 282 ~~~~~~k~~~~l~~~p---~~~l~~~l~~~~~ 310 (314)
T TIGR02197 282 TQADITKLRAAGYYGP---FTTLEEGVKDYVQ 310 (314)
T ss_pred cccchHHHHHhcCCCC---cccHHHHHHHHHH
Confidence 2357888888999999 4456666665554
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=227.42 Aligned_cols=257 Identities=25% Similarity=0.368 Sum_probs=189.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc-cE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI-DV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~-d~ 164 (405)
|+|||||||||||++|+++|+++|++|++++|...+... .. .+++++.+|++|.+.+.+++++ + |+
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~--~~~~~~~~d~~~~~~~~~~~~~----~~d~ 67 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDP-------LL--SGVEFVVLDLTDRDLVDELAKG----VPDA 67 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccc-------cc--cccceeeecccchHHHHHHHhc----CCCE
Confidence 349999999999999999999999999999998765421 11 4789999999999888888887 6 99
Q ss_pred EEEcccccCCCC------cchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC------C----------ChhHHHHHH
Q 043385 165 VVSCLASRSGGV------KDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK------P----------LLEFQRAKL 222 (405)
Q Consensus 165 Vv~~a~~~~~~~------~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~------~----------~~~y~~sK~ 222 (405)
|||+|+...... .+.+++|+.++.+++++|++.++++|||.||.+++. + .++|+.+|.
T Consensus 68 vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~ 147 (314)
T COG0451 68 VIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKL 147 (314)
T ss_pred EEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHH
Confidence 999999764321 237899999999999999999999999988866542 1 124999999
Q ss_pred HHHHHHHHHhhhcCCceEEEEecCCcccCchH------HH----HHHHhCCC-eEEecCCeeeehhhc------------
Q 043385 223 KFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG------QV----ELVKEGKP-YVMFGDGKLCAYCVL------------ 279 (405)
Q Consensus 223 ~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~------~~----~~~~~g~~-~~~~g~g~~~~~~~~------------ 279 (405)
.+|+.++.+.. ..+++++++||+.+|||... +. ..+..+.+ ....+++...+++++
T Consensus 148 ~~E~~~~~~~~-~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~ 226 (314)
T COG0451 148 AAEQLLRAYAR-LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL 226 (314)
T ss_pred HHHHHHHHHHH-HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHH
Confidence 99999999886 67999999999999998632 22 23556665 555667676542221
Q ss_pred ccccccceEeccCCCC-CCCHHHHHHHHHHHcCCCCC-eeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhh
Q 043385 280 SEDKINQILPIGGPGK-ALTPLEQGEILFRLLGKEPK-FLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAE 357 (405)
Q Consensus 280 ~~~~~~~~y~i~~~g~-~~t~~ela~~l~~~~g~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (405)
.....+ +||++++ . .+++.|+++.+.+.+|.+.. +...+. .......
T Consensus 227 ~~~~~~-~~ni~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~ 275 (314)
T COG0451 227 ENPDGG-VFNIGSG-TAEITVRELAEAVAEAVGSKAPLIVYIPL-----------------------------GRRGDLR 275 (314)
T ss_pred hCCCCc-EEEeCCC-CCcEEHHHHHHHHHHHhCCCCcceeecCC-----------------------------CCCCccc
Confidence 112222 9999985 6 89999999999999998755 322221 0000011
Q ss_pred hhcccCccccccccccCCccchhhHHHHHHHHh
Q 043385 358 SMLILDPETGEYSAEKTPSYGKDTLEEFFERVL 390 (405)
Q Consensus 358 ~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~ 390 (405)
....+|..+++..+||.|.+ ++++.+.+..
T Consensus 276 ~~~~~~~~~~~~~lg~~p~~---~~~~~i~~~~ 305 (314)
T COG0451 276 EGKLLDISKARAALGWEPKV---SLEEGLADTL 305 (314)
T ss_pred ccccCCHHHHHHHhCCCCCC---CHHHHHHHHH
Confidence 22336777888899999954 4444444443
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-28 Score=226.87 Aligned_cols=263 Identities=21% Similarity=0.243 Sum_probs=182.3
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--CC-cc
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--TS-ID 163 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--~~-~d 163 (405)
+|+||||||+||++++++|+++|++|++++|++++.. ..+++.+.+|+.|++++.+++++.. .+ +|
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d 69 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEIS 69 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcccCcCCcee
Confidence 4899999999999999999999999999999987531 1367788899999999999995211 13 89
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhhhcCCceEEEE
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIV 243 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~il 243 (405)
.|+|+++.... ....+++++++|+++|++|||++||.+++... ..+...|+++++ ..|++++++
T Consensus 70 ~v~~~~~~~~~--------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~----~~~~~~~~~l~~----~~gi~~til 133 (285)
T TIGR03649 70 AVYLVAPPIPD--------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG----PAMGQVHAHLDS----LGGVEYTVL 133 (285)
T ss_pred EEEEeCCCCCC--------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC----chHHHHHHHHHh----ccCCCEEEE
Confidence 99998774321 13457789999999999999999998765332 244556666654 249999999
Q ss_pred ecCCcccCchH--HHHHHHhCCCeEE-ecCCeeee-----------hhhcccccccceEeccCCCCCCCHHHHHHHHHHH
Q 043385 244 RPTAFFKSLGG--QVELVKEGKPYVM-FGDGKLCA-----------YCVLSEDKINQILPIGGPGKALTPLEQGEILFRL 309 (405)
Q Consensus 244 Rp~~v~g~~~~--~~~~~~~g~~~~~-~g~g~~~~-----------~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~ 309 (405)
||+++|+++.. +...+..+..+.. .|++...+ .++..+...+++|+++++ +.+|+.|+++.+.+.
T Consensus 134 Rp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~-~~~s~~eia~~l~~~ 212 (285)
T TIGR03649 134 RPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGP-ELLTYDDVAEILSRV 212 (285)
T ss_pred eccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCC-ccCCHHHHHHHHHHH
Confidence 99999987632 1223333333332 23332222 223344456789999998 899999999999999
Q ss_pred cCCCCCeeecChHHHHHHH---HHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHH
Q 043385 310 LGKEPKFLKVPIGIMDFAI---GVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFF 386 (405)
Q Consensus 310 ~g~~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~ 386 (405)
+|+++++.++|.+.+.... ++.+++..+...+......| . ........++.+|..| ++|++|+
T Consensus 213 ~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g---------~-~~~~~~~~~~~~G~~p----~~~~~~~ 278 (285)
T TIGR03649 213 LGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNG---------A-EVRLNDVVKAVTGSKP----RGFRDFA 278 (285)
T ss_pred hCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCC---------c-cccccchHHHHhCcCC----ccHHHHH
Confidence 9999999999988665332 22222222221111111111 1 1112344456789988 9999999
Q ss_pred HHHhh
Q 043385 387 ERVLR 391 (405)
Q Consensus 387 ~~~~~ 391 (405)
+++..
T Consensus 279 ~~~~~ 283 (285)
T TIGR03649 279 ESNKA 283 (285)
T ss_pred HHhhh
Confidence 99864
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=226.44 Aligned_cols=203 Identities=18% Similarity=0.231 Sum_probs=158.0
Q ss_pred EEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEEEc
Q 043385 89 LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSC 168 (405)
Q Consensus 89 lVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv~~ 168 (405)
||||||||||++|++.|+++|++|+++.+. ..+|++|.+.+.++++. .++|+||||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~--~~~d~Vih~ 56 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAK--EKPTYVILA 56 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhc--cCCCEEEEe
Confidence 699999999999999999999988766432 13799999999999886 358999999
Q ss_pred ccccC------CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------C---Ch-hHHHHHHH
Q 043385 169 LASRS------GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------P---LL-EFQRAKLK 223 (405)
Q Consensus 169 a~~~~------~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------~---~~-~y~~sK~~ 223 (405)
|+... ..+.+.+++|+.++.+++++|++.++++||++||..+|. + .+ .|+.+|..
T Consensus 57 A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~ 136 (306)
T PLN02725 57 AAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIA 136 (306)
T ss_pred eeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHH
Confidence 98632 234457889999999999999999999999999998873 1 12 39999999
Q ss_pred HHHHHHHHhhhcCCceEEEEecCCcccCchH-----------HHH----HHHhCCCeEE-ecCCeeeehhhc--------
Q 043385 224 FEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG-----------QVE----LVKEGKPYVM-FGDGKLCAYCVL-------- 279 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~-----------~~~----~~~~g~~~~~-~g~g~~~~~~~~-------- 279 (405)
+|++++.+.. ..+++++++||+++|||... ++. ....+.++.+ +++|.+.+++++
T Consensus 137 ~e~~~~~~~~-~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~ 215 (306)
T PLN02725 137 GIKMCQAYRI-QYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAV 215 (306)
T ss_pred HHHHHHHHHH-HhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHH
Confidence 9998887765 46899999999999998531 222 2234566555 677777652211
Q ss_pred ----ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCee
Q 043385 280 ----SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFL 317 (405)
Q Consensus 280 ----~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~ 317 (405)
......+.||++++ +.+++.|+++.+.+.+|.+..+.
T Consensus 216 ~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~~~~~ 256 (306)
T PLN02725 216 VFLMRRYSGAEHVNVGSG-DEVTIKELAELVKEVVGFEGELV 256 (306)
T ss_pred HHHHhccccCcceEeCCC-CcccHHHHHHHHHHHhCCCCcee
Confidence 12234578999985 89999999999999998765543
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-28 Score=228.52 Aligned_cols=210 Identities=16% Similarity=0.194 Sum_probs=150.5
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHH----HHHHHhh-CCCc
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESL----EKSLENL-GTSI 162 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l----~~~~~~~-~~~~ 162 (405)
||||||+||||++|+++|+++|++|+++.|+..... .. ..+..+|+.|..+. .+++++. ..++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~-------~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 69 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-------KF-----VNLVDLDIADYMDKEDFLAQIMAGDDFGDI 69 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcch-------HH-----HhhhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence 899999999999999999999998777766543210 00 11233555554333 2333210 0248
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHH
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFE 225 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E 225 (405)
|+|||+|+.... +....++.|+.++.+++++|++.++ +|||+||.++|. |.+.|+.+|..+|
T Consensus 70 d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E 148 (308)
T PRK11150 70 EAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFD 148 (308)
T ss_pred cEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHH
Confidence 999999985322 2234788999999999999999987 699999998762 4467999999999
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCchH-----------HHHHHHhCCCeEEe-cCCeeeehhhc-----------ccc
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSLGG-----------QVELVKEGKPYVMF-GDGKLCAYCVL-----------SED 282 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~~~-----------~~~~~~~g~~~~~~-g~g~~~~~~~~-----------~~~ 282 (405)
++++.++. ..+++++++||+++|||... +...+.++....++ |++...+++++ .+.
T Consensus 149 ~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~ 227 (308)
T PRK11150 149 EYVRQILP-EANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN 227 (308)
T ss_pred HHHHHHHH-HcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc
Confidence 99998875 46899999999999998531 12456666655444 55555441111 112
Q ss_pred cccceEeccCCCCCCCHHHHHHHHHHHcCC
Q 043385 283 KINQILPIGGPGKALTPLEQGEILFRLLGK 312 (405)
Q Consensus 283 ~~~~~y~i~~~g~~~t~~ela~~l~~~~g~ 312 (405)
..+++||+++. +.+|+.|+++.+.+.+|.
T Consensus 228 ~~~~~yni~~~-~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 228 GVSGIFNCGTG-RAESFQAVADAVLAYHKK 256 (308)
T ss_pred CCCCeEEcCCC-CceeHHHHHHHHHHHhCC
Confidence 23579999985 889999999999999985
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-27 Score=227.39 Aligned_cols=221 Identities=18% Similarity=0.169 Sum_probs=158.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+..+|+||||||+||||++++++|+++|++|++++|+..+... ....+....+++++.+|++|.+.+.+++++
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---- 79 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLH---LLSKWKEGDRLRLFRADLQEEGSFDEAVKG---- 79 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHH---HHHhhccCCeEEEEECCCCCHHHHHHHHcC----
Confidence 3467899999999999999999999999999999997653210 011111124688999999999999999987
Q ss_pred ccEEEEcccccCCC-------Ccc-----hhHhHHHHHHHHHHHHHhcC-CCEEEEEccccccC----------------
Q 043385 162 IDVVVSCLASRSGG-------VKD-----SWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQK---------------- 212 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~-------~~~-----~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~~---------------- 212 (405)
+|+|||+|+..... +.. .++.|+.++.+++++|++.+ +++||++||.++|.
T Consensus 80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~ 159 (353)
T PLN02896 80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETC 159 (353)
T ss_pred CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCccc
Confidence 99999999865321 222 33455799999999998875 88999999987762
Q ss_pred --C----------ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----HHHHHHH---hCCCeE--EecC
Q 043385 213 --P----------LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----GQVELVK---EGKPYV--MFGD 270 (405)
Q Consensus 213 --~----------~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----~~~~~~~---~g~~~~--~~g~ 270 (405)
| .++|+.+|.++|+++..++. ..+++++++||+++|||.. .++..+. .|.... ..+.
T Consensus 160 ~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 238 (353)
T PLN02896 160 QTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAK-ENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSA 238 (353)
T ss_pred CCcHHHhhccCCCCccHHHHHHHHHHHHHHHHH-HcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccc
Confidence 0 12799999999999998876 5799999999999999852 2333232 233211 1111
Q ss_pred C-------eeee--hhh------cccccccceEeccCCCCCCCHHHHHHHHHHHcCC
Q 043385 271 G-------KLCA--YCV------LSEDKINQILPIGGPGKALTPLEQGEILFRLLGK 312 (405)
Q Consensus 271 g-------~~~~--~~~------~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~ 312 (405)
. +..+ |++ ......+++|++++ ..+++.|+++.+.+.++.
T Consensus 239 ~~~~~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~~~--~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 239 VNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCV--DSYDMSELINHLSKEYPC 293 (353)
T ss_pred cccccCceeEEeHHHHHHHHHHHHhCCCcCccEEecC--CCCCHHHHHHHHHHhCCC
Confidence 1 1112 111 11122345787654 689999999999998863
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=215.46 Aligned_cols=268 Identities=21% Similarity=0.268 Sum_probs=198.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHh-hhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEET-LNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.++||||||+||||+|.+-+|+++|+.|++++.-............. .....++.++.+|++|.+.|++.|+. ..+|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~--~~fd 79 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSE--VKFD 79 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhh--cCCc
Confidence 47899999999999999999999999999999865544322222222 22235899999999999999999998 4799
Q ss_pred EEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---------------CCChhHHHHHHH
Q 043385 164 VVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---------------KPLLEFQRAKLK 223 (405)
Q Consensus 164 ~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---------------~~~~~y~~sK~~ 223 (405)
.|+|.|+... ..+..++..|+.|+.++++.|++.+++.+||.||+.+| .|.++|+.+|..
T Consensus 80 ~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~ 159 (343)
T KOG1371|consen 80 AVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKA 159 (343)
T ss_pred eEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHH
Confidence 9999998643 24556889999999999999999999999999999998 377899999999
Q ss_pred HHHHHHHHhhhcCCceEEEEecCCccc--CchH--------------HHHHHHh---------CCCeEEecCCeeeehhh
Q 043385 224 FEAEMMKVAEEDSGFTYSIVRPTAFFK--SLGG--------------QVELVKE---------GKPYVMFGDGKLCAYCV 278 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~~~ilRp~~v~g--~~~~--------------~~~~~~~---------g~~~~~~g~g~~~~~~~ 278 (405)
+|+.+..+.. ..+..++.||...++| |.+. .+....- |.++. .-+|+..++++
T Consensus 160 iE~i~~d~~~-~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~-t~dgt~vrdyi 237 (343)
T KOG1371|consen 160 IEEIIHDYNK-AYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYT-TIDGTIVRDYI 237 (343)
T ss_pred HHHHHHhhhc-cccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCccc-ccCCCeeecce
Confidence 9999999887 5679999999999998 4321 1111211 12221 22445555333
Q ss_pred cc---------------cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhh
Q 043385 279 LS---------------EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLED 343 (405)
Q Consensus 279 ~~---------------~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 343 (405)
+. ....-++||++. |...+..+|+..+.++.|.++++.-+|..
T Consensus 238 ~v~Dla~~h~~al~k~~~~~~~~i~Nlgt-g~g~~V~~lv~a~~k~~g~~~k~~~v~~R--------------------- 295 (343)
T KOG1371|consen 238 HVLDLADGHVAALGKLRGAAEFGVYNLGT-GKGSSVLELVTAFEKALGVKIKKKVVPRR--------------------- 295 (343)
T ss_pred eeEehHHHHHHHhhccccchheeeEeecC-CCCccHHHHHHHHHHHhcCCCCccccCCC---------------------
Confidence 21 112335999997 48999999999999999998777544421
Q ss_pred hhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 344 AAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
.|....+| -+++++.++|||+|.++. ++-++..++
T Consensus 296 ---~gdv~~~y-------a~~~~a~~elgwk~~~~i---ee~c~dlw~ 330 (343)
T KOG1371|consen 296 ---NGDVAFVY-------ANPSKAQRELGWKAKYGL---QEMLKDLWR 330 (343)
T ss_pred ---CCCceeee-------eChHHHHHHhCCccccCH---HHHHHHHHH
Confidence 12222222 478888999999997764 444444443
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=219.71 Aligned_cols=266 Identities=21% Similarity=0.291 Sum_probs=188.7
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEE
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVV 166 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv 166 (405)
+||||||||+||++++++|+++|++|++++|........ ........+++++.+|+.|++.+.++++. .++|+||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~d~vv 75 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEA---LKRGERITRVTFVEGDLRDRELLDRLFEE--HKIDAVI 75 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhh---hhhhccccceEEEECCCCCHHHHHHHHHh--CCCcEEE
Confidence 589999999999999999999999999887643321100 01111112577899999999999999985 3599999
Q ss_pred EcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHHHH
Q 043385 167 SCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFEAE 227 (405)
Q Consensus 167 ~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E~~ 227 (405)
||||.... ...+.++.|+.++.+++++|.+.++++||++||.++|. |.+.|+.+|..+|.+
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~ 155 (328)
T TIGR01179 76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERI 155 (328)
T ss_pred ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHH
Confidence 99986421 33456789999999999999999999999999987762 346799999999999
Q ss_pred HHHHhhhcCCceEEEEecCCcccCch------------HHH----HHHH-hCCCeEEec------CCeeee------hh-
Q 043385 228 MMKVAEEDSGFTYSIVRPTAFFKSLG------------GQV----ELVK-EGKPYVMFG------DGKLCA------YC- 277 (405)
Q Consensus 228 ~~~~~~~~~gi~~~ilRp~~v~g~~~------------~~~----~~~~-~g~~~~~~g------~g~~~~------~~- 277 (405)
++.++.+..+++++++||+.+||+.. .++ .... ...++..+| +|...+ |+
T Consensus 156 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a 235 (328)
T TIGR01179 156 LRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLA 235 (328)
T ss_pred HHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHH
Confidence 99887633799999999999999742 112 1222 223343333 344433 11
Q ss_pred ------hcc--cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhh
Q 043385 278 ------VLS--EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGK 349 (405)
Q Consensus 278 ------~~~--~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (405)
+.. ....+++||++++ +.+|+.|+++.+.+.+|++.++...+.+. .+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~n~~~~-~~~s~~ei~~~~~~~~g~~~~~~~~~~~~------------------~~~----- 291 (328)
T TIGR01179 236 DAHLAALEYLLNGGESHVYNLGYG-QGFSVLEVIEAFKKVSGVDFPVELAPRRP------------------GDP----- 291 (328)
T ss_pred HHHHHHHhhhhcCCCcceEEcCCC-CcccHHHHHHHHHHHhCCCcceEeCCCCC------------------ccc-----
Confidence 111 1245689999986 89999999999999999877665444220 000
Q ss_pred hhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 350 IGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 350 ~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
..+..++++++..+||+|.+ .++++.+++..+
T Consensus 292 --------~~~~~~~~~~~~~lg~~p~~--~~l~~~~~~~~~ 323 (328)
T TIGR01179 292 --------ASLVADASKIRRELGWQPKY--TDLEIIIKTAWR 323 (328)
T ss_pred --------cchhcchHHHHHHhCCCCCc--chHHHHHHHHHH
Confidence 01124677778889999944 236666666654
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-27 Score=225.25 Aligned_cols=227 Identities=18% Similarity=0.231 Sum_probs=187.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
....+|+||||||+|-||+.+|+++++.+ .++++++|++.+.......+.......++.++.||+.|.+.+.+++++
T Consensus 246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~-- 323 (588)
T COG1086 246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG-- 323 (588)
T ss_pred hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc--
Confidence 34688999999999999999999999997 679999999877643333222221235788999999999999999998
Q ss_pred CCccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhhh
Q 043385 160 TSIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEE 234 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~ 234 (405)
.++|+|||+|+.-+ .++.+.+++|+.||.|++++|.++||++||.+||..+-.|.+.||.+|+.+|.++..++.+
T Consensus 324 ~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmGaTKr~aE~~~~a~~~~ 403 (588)
T COG1086 324 HKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMGATKRLAEKLFQAANRN 403 (588)
T ss_pred CCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHhhHHHHHHHHHHHHHhhc
Confidence 57999999998644 3667789999999999999999999999999999999999999999999999999998763
Q ss_pred cC--CceEEEEecCCcccCchH----HHHHHHhCCCeEEecCCeeeehhhc------------ccccccceEeccCCCCC
Q 043385 235 DS--GFTYSIVRPTAFFKSLGG----QVELVKEGKPYVMFGDGKLCAYCVL------------SEDKINQILPIGGPGKA 296 (405)
Q Consensus 235 ~~--gi~~~ilRp~~v~g~~~~----~~~~~~~g~~~~~~g~g~~~~~~~~------------~~~~~~~~y~i~~~g~~ 296 (405)
.. +.+++++|.|+|.|..+. |.+++.+|+|++ +.+.+..+.++. .....|++|-+-- |++
T Consensus 404 ~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplT-vTdp~mtRyfMTI~EAv~LVlqA~a~~~gGeifvldM-Gep 481 (588)
T COG1086 404 VSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLT-VTDPDMTRFFMTIPEAVQLVLQAGAIAKGGEIFVLDM-GEP 481 (588)
T ss_pred cCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCcc-ccCCCceeEEEEHHHHHHHHHHHHhhcCCCcEEEEcC-CCC
Confidence 33 599999999999997643 668899999987 455555552221 2245577888765 689
Q ss_pred CCHHHHHHHHHHHcC
Q 043385 297 LTPLEQGEILFRLLG 311 (405)
Q Consensus 297 ~t~~ela~~l~~~~g 311 (405)
+++.|+|+.+.+..|
T Consensus 482 vkI~dLAk~mi~l~g 496 (588)
T COG1086 482 VKIIDLAKAMIELAG 496 (588)
T ss_pred eEHHHHHHHHHHHhC
Confidence 999999999999998
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-26 Score=240.20 Aligned_cols=229 Identities=20% Similarity=0.234 Sum_probs=168.6
Q ss_pred CeEEEEcCCChhHHHHHHHHH--hCCCeEEEEecCCCCcCCCCchhHhh-h--ccCCcEEEEcCCCCH------HHHHHH
Q 043385 86 INILVVGSTGYIGKFVVEELV--SRGFNVIAIAREKSGIRGRNDKEETL-N--QLQGASVCFSDVTNL------ESLEKS 154 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~--~~g~~V~~l~r~~~~~~~~~~~~~~~-~--~~~~v~~~~~Dl~d~------~~l~~~ 154 (405)
|+|||||||||||++|+++|+ ++|++|++++|+..... ...+ . ...+++++.+|++|+ +.+.++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~-----~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l 75 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSR-----LEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL 75 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHH-----HHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh
Confidence 589999999999999999999 57899999999653210 0111 1 114789999999984 345444
Q ss_pred HHhhCCCccEEEEcccccC--CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC----------------CChh
Q 043385 155 LENLGTSIDVVVSCLASRS--GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK----------------PLLE 216 (405)
Q Consensus 155 ~~~~~~~~d~Vv~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~----------------~~~~ 216 (405)
++ +|+|||||+... .......++|+.++.+++++|++.++++|||+||.++|. +.++
T Consensus 76 -~~----~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~ 150 (657)
T PRK07201 76 -GD----IDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTP 150 (657)
T ss_pred -cC----CCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCc
Confidence 55 999999999653 233457789999999999999999999999999998862 1256
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH-----------HHHHHHh--C--CCeEEecCCeeee------
Q 043385 217 FQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG-----------QVELVKE--G--KPYVMFGDGKLCA------ 275 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~-----------~~~~~~~--g--~~~~~~g~g~~~~------ 275 (405)
|+.+|.++|+++++ ..+++++++||+++||+... ++..+.. . ..+..++.+....
T Consensus 151 Y~~sK~~~E~~~~~----~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vd 226 (657)
T PRK07201 151 YHRTKFEAEKLVRE----ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVD 226 (657)
T ss_pred hHHHHHHHHHHHHH----cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHH
Confidence 99999999999875 36899999999999996311 1112211 1 1122333332221
Q ss_pred -------hhhcccccccceEeccCCCCCCCHHHHHHHHHHHcCCCC---CeeecChHHHHHHHH
Q 043385 276 -------YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEP---KFLKVPIGIMDFAIG 329 (405)
Q Consensus 276 -------~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~---~~~~~p~~~~~~~~~ 329 (405)
.++..+...+++||++++ +.+++.|+++.+.+.+|.+. ...++|.++......
T Consensus 227 dva~ai~~~~~~~~~~g~~~ni~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~ 289 (657)
T PRK07201 227 YVADALDHLMHKDGRDGQTFHLTDP-KPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLA 289 (657)
T ss_pred HHHHHHHHHhcCcCCCCCEEEeCCC-CCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhh
Confidence 122234456789999997 89999999999999999987 777788887665554
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=217.66 Aligned_cols=222 Identities=21% Similarity=0.209 Sum_probs=159.9
Q ss_pred EEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcE----EEEcCCCCHHHHHHHHHhhCCCc
Q 043385 88 ILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGAS----VCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~----~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
||||||+|.||+.||++|++.+ .+|++++|++.+.......+......+++. .+.||++|.+.+..+++. .++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~--~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE--YKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT----T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh--cCC
Confidence 7999999999999999999998 689999999876543322221111123443 458999999999999994 359
Q ss_pred cEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhhhc--
Q 043385 163 DVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEED-- 235 (405)
Q Consensus 163 d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~~-- 235 (405)
|+|||.|+.-. ..+.+.+++|+.||+|++++|.++++++||++||..+.+|.+-||++|+.+|.++..++...
T Consensus 79 diVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~PtnvmGatKrlaE~l~~~~~~~~~~ 158 (293)
T PF02719_consen 79 DIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVMGATKRLAEKLVQAANQYSGN 158 (293)
T ss_dssp SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHHHHHHHHHHHHHHHHCCTSSS
T ss_pred CEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHHHHHHHHHHHHHHHHhhhCCC
Confidence 99999998643 35667899999999999999999999999999999999999999999999999999988632
Q ss_pred CCceEEEEecCCcccCc----hHHHHHHHhCCCeEEecCCeeee--------hhhc---ccccccceEeccCCCCCCCHH
Q 043385 236 SGFTYSIVRPTAFFKSL----GGQVELVKEGKPYVMFGDGKLCA--------YCVL---SEDKINQILPIGGPGKALTPL 300 (405)
Q Consensus 236 ~gi~~~ilRp~~v~g~~----~~~~~~~~~g~~~~~~g~g~~~~--------~~~~---~~~~~~~~y~i~~~g~~~t~~ 300 (405)
.+.+++++|.|+|+|.. +-|.+++.+|+|+++.......+ .++. .-...|++|.+-- |+++++.
T Consensus 159 ~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~~~geifvl~m-g~~v~I~ 237 (293)
T PF02719_consen 159 SDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALAKGGEIFVLDM-GEPVKIL 237 (293)
T ss_dssp S--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH--TTEEEEE----TCEECC
T ss_pred CCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhCCCCcEEEecC-CCCcCHH
Confidence 36899999999999964 45778999999998654433322 1111 1234577887765 5899999
Q ss_pred HHHHHHHHHcCC
Q 043385 301 EQGEILFRLLGK 312 (405)
Q Consensus 301 ela~~l~~~~g~ 312 (405)
|+++.+.+..|.
T Consensus 238 dlA~~~i~~~g~ 249 (293)
T PF02719_consen 238 DLAEAMIELSGL 249 (293)
T ss_dssp CHHHHHHHHTT-
T ss_pred HHHHHHHhhccc
Confidence 999999999985
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=210.18 Aligned_cols=194 Identities=28% Similarity=0.427 Sum_probs=160.6
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEEE
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVS 167 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv~ 167 (405)
|||||||||||++++++|+++|+.|+.+.|+..... ......+++++.+|+.|.+.+.+++++. .+|+|||
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~-------~~~~~~~~~~~~~dl~~~~~~~~~~~~~--~~d~vi~ 71 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSES-------FEEKKLNVEFVIGDLTDKEQLEKLLEKA--NIDVVIH 71 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGH-------HHHHHTTEEEEESETTSHHHHHHHHHHH--TESEEEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccc-------cccccceEEEEEeecccccccccccccc--CceEEEE
Confidence 799999999999999999999999999999876531 1111127899999999999999999982 4699999
Q ss_pred cccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHHHHH
Q 043385 168 CLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFEAEM 228 (405)
Q Consensus 168 ~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E~~~ 228 (405)
+|+... ......++.|+.++++++++|++.++++||++||..+|. |.++|+.+|...|+++
T Consensus 72 ~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~ 151 (236)
T PF01370_consen 72 LAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELL 151 (236)
T ss_dssp EBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHH
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 998752 134567889999999999999999999999999998872 3467999999999999
Q ss_pred HHHhhhcCCceEEEEecCCcccCc----------hHHHHHHHhCCCeEEecCCeeeehhh-------------ccccccc
Q 043385 229 MKVAEEDSGFTYSIVRPTAFFKSL----------GGQVELVKEGKPYVMFGDGKLCAYCV-------------LSEDKIN 285 (405)
Q Consensus 229 ~~~~~~~~gi~~~ilRp~~v~g~~----------~~~~~~~~~g~~~~~~g~g~~~~~~~-------------~~~~~~~ 285 (405)
+.+.. ..+++++++||+.+|||. ..++..+..++++.+++++.+.++++ ..+...+
T Consensus 152 ~~~~~-~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 230 (236)
T PF01370_consen 152 RDYAK-KYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAG 230 (236)
T ss_dssp HHHHH-HHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTT
T ss_pred ccccc-ccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCC
Confidence 99876 469999999999999998 13567788899999999999887222 2333568
Q ss_pred ceEecc
Q 043385 286 QILPIG 291 (405)
Q Consensus 286 ~~y~i~ 291 (405)
++|||+
T Consensus 231 ~~yNig 236 (236)
T PF01370_consen 231 GIYNIG 236 (236)
T ss_dssp EEEEES
T ss_pred CEEEeC
Confidence 899985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=236.52 Aligned_cols=187 Identities=22% Similarity=0.279 Sum_probs=147.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|+||||+||||++++++|+++|++|++++|+.... . ..+++++.+|++|.+.+.+++++ +|+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---------~--~~~v~~v~gDL~D~~~l~~al~~----vD~V 65 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---------W--PSSADFIAADIRDATAVESAMTG----ADVV 65 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---------c--ccCceEEEeeCCCHHHHHHHHhC----CCEE
Confidence 5899999999999999999999999999999975321 1 12678999999999999999988 9999
Q ss_pred EEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhhhcCCceEEEEec
Q 043385 166 VSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRP 245 (405)
Q Consensus 166 v~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp 245 (405)
||||+.... .+++|+.++.+++++|++.++++||++||.. |.++|+++.+ ++++++++||
T Consensus 66 VHlAa~~~~----~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~-----------K~aaE~ll~~-----~gl~~vILRp 125 (854)
T PRK05865 66 AHCAWVRGR----NDHINIDGTANVLKAMAETGTGRIVFTSSGH-----------QPRVEQMLAD-----CGLEWVAVRC 125 (854)
T ss_pred EECCCcccc----hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH-----------HHHHHHHHHH-----cCCCEEEEEe
Confidence 999986432 5689999999999999999999999999974 8999998865 7999999999
Q ss_pred CCcccCch-HHHHHHHhCCCeEEecCCeeee------h-------hhcccccccceEeccCCCCCCCHHHHHHHHHHH
Q 043385 246 TAFFKSLG-GQVELVKEGKPYVMFGDGKLCA------Y-------CVLSEDKINQILPIGGPGKALTPLEQGEILFRL 309 (405)
Q Consensus 246 ~~v~g~~~-~~~~~~~~g~~~~~~g~g~~~~------~-------~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~ 309 (405)
+++|||.. .++..+.. .++...|++...+ | ++......+++|||+++ +.+|+.|+++.+.+.
T Consensus 126 ~~VYGP~~~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg-~~~Si~EIae~l~~~ 201 (854)
T PRK05865 126 ALIFGRNVDNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAP-GELTFRRIAAALGRP 201 (854)
T ss_pred ceEeCCChHHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECC-CcccHHHHHHHHhhh
Confidence 99999963 34444332 2233334444322 1 12223335789999986 899999999988764
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=221.66 Aligned_cols=244 Identities=24% Similarity=0.344 Sum_probs=167.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||+|+||++|++.|.++|++|+++.|. ..|+.|.+.+.+.++.. ++|+|
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~--~pd~V 55 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF--KPDVV 55 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH----SEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh--CCCeE
Confidence 799999999999999999999999999999775 36999999999998873 69999
Q ss_pred EEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------------CCChhHHHHHHHHHH
Q 043385 166 VSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------------KPLLEFQRAKLKFEA 226 (405)
Q Consensus 166 v~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------------~~~~~y~~sK~~~E~ 226 (405)
|||||.... +++..+++|+.++.+++++|.+.|+ ++||+||..+| .|.+.||++|.++|+
T Consensus 56 in~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~ 134 (286)
T PF04321_consen 56 INCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQ 134 (286)
T ss_dssp EE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHH
T ss_pred eccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHH
Confidence 999997642 4556889999999999999999987 89999999886 356789999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCc-h----HHHHHHHhCCCeEEecCCeeee----hh-------hcc---cccccce
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSL-G----GQVELVKEGKPYVMFGDGKLCA----YC-------VLS---EDKINQI 287 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~-~----~~~~~~~~g~~~~~~g~g~~~~----~~-------~~~---~~~~~~~ 287 (405)
.+++. .-++.|+|++++||+. . .+++.+..++.+.++.+..... ++ +.. .....++
T Consensus 135 ~v~~~-----~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Gi 209 (286)
T PF04321_consen 135 AVRAA-----CPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGI 209 (286)
T ss_dssp HHHHH------SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EE
T ss_pred HHHHh-----cCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhccccccccee
Confidence 99882 3489999999999983 2 3456667788888776644322 11 111 1123689
Q ss_pred EeccCCCCCCCHHHHHHHHHHHcCCCC-CeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccc
Q 043385 288 LPIGGPGKALTPLEQGEILFRLLGKEP-KFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPET 366 (405)
Q Consensus 288 y~i~~~g~~~t~~ela~~l~~~~g~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 366 (405)
||++|+ +.+|+.|+++.+++.+|.+. .+.+++..... ... ..-....+|.++
T Consensus 210 yh~~~~-~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~-----------------~~~---------~rp~~~~L~~~k 262 (286)
T PF04321_consen 210 YHLSGP-ERVSRYEFAEAIAKILGLDPELIKPVSSSEFP-----------------RAA---------PRPRNTSLDCRK 262 (286)
T ss_dssp EE---B-S-EEHHHHHHHHHHHHTHCTTEEEEESSTTST-----------------TSS---------GS-SBE-B--HH
T ss_pred EEEecC-cccCHHHHHHHHHHHhCCCCceEEecccccCC-----------------CCC---------CCCCcccccHHH
Confidence 999998 79999999999999999876 55555443111 000 011234578888
Q ss_pred cccccccCCccchhhHHHHHHHHhh
Q 043385 367 GEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 367 ~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
.+..+|.+| .++++.++++++
T Consensus 263 l~~~~g~~~----~~~~~~l~~~~~ 283 (286)
T PF04321_consen 263 LKNLLGIKP----PPWREGLEELVK 283 (286)
T ss_dssp HHHCTTS-------BHHHHHHHHHH
T ss_pred HHHccCCCC----cCHHHHHHHHHH
Confidence 888889888 555555555543
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-26 Score=218.97 Aligned_cols=232 Identities=19% Similarity=0.205 Sum_probs=165.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhc--------c-CCcEEEEcCCCCH------H
Q 043385 87 NILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQ--------L-QGASVCFSDVTNL------E 149 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~--------~-~~v~~~~~Dl~d~------~ 149 (405)
+|||||||||||++++++|+++| ++|++++|+.+......+..+.+.. . .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 6799999986532111010011100 0 4789999999764 4
Q ss_pred HHHHHHHhhCCCccEEEEcccccC--CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC--------------
Q 043385 150 SLEKSLENLGTSIDVVVSCLASRS--GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP-------------- 213 (405)
Q Consensus 150 ~l~~~~~~~~~~~d~Vv~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~-------------- 213 (405)
.+..+.++ +|+|||||+... .......++|+.++.+++++|.+.++++||++||.+++..
T Consensus 81 ~~~~~~~~----~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~ 156 (367)
T TIGR01746 81 EWERLAEN----VDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVT 156 (367)
T ss_pred HHHHHHhh----CCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccc
Confidence 56666666 999999999754 2344567899999999999999999999999999988732
Q ss_pred -----ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCc-------hHHH----HHHHhCCCeEEecCC-ee--e
Q 043385 214 -----LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL-------GGQV----ELVKEGKPYVMFGDG-KL--C 274 (405)
Q Consensus 214 -----~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~-------~~~~----~~~~~g~~~~~~g~g-~~--~ 274 (405)
.+.|+.+|..+|.+++.+.. .|++++++|||.+||+. ..++ ......+..+ ...+ .. .
T Consensus 157 ~~~~~~~~Y~~sK~~~E~~~~~~~~--~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~ 233 (367)
T TIGR01746 157 PPPGLAGGYAQSKWVAELLVREASD--RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYP-DSPELTEDLT 233 (367)
T ss_pred cccccCCChHHHHHHHHHHHHHHHh--cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCC-CCCccccCcc
Confidence 24699999999999988765 59999999999999962 1122 1111222111 1111 11 1
Q ss_pred e---------hhhccccc--ccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHH
Q 043385 275 A---------YCVLSEDK--INQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFA 327 (405)
Q Consensus 275 ~---------~~~~~~~~--~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~ 327 (405)
. .++..+.. .+++||++++ +.+++.|+++.+.+ .|.+.+.++.+.|.....
T Consensus 234 ~vddva~ai~~~~~~~~~~~~~~~~~v~~~-~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~~~ 295 (367)
T TIGR01746 234 PVDYVARAIVALSSQPAASAGGPVFHVVNP-EPVSLDEFLEWLER-AGYNLKLVSFDEWLQRLE 295 (367)
T ss_pred cHHHHHHHHHHHHhCCCcccCCceEEecCC-CCCCHHHHHHHHHH-cCCCCCcCCHHHHHHHHH
Confidence 1 11122222 2789999997 89999999999999 898888777777755443
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=203.25 Aligned_cols=198 Identities=23% Similarity=0.306 Sum_probs=161.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|||||++|.+|++|++.|. .+++|++++|.. .|++|++.+.+.++. .++|+|
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~--~~PDvV 54 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRE--TRPDVV 54 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHh--hCCCEE
Confidence 459999999999999999998 668999998863 799999999999998 368999
Q ss_pred EEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------------CCChhHHHHHHHHHH
Q 043385 166 VSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------------KPLLEFQRAKLKFEA 226 (405)
Q Consensus 166 v~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------------~~~~~y~~sK~~~E~ 226 (405)
||+|+.... +++..+.+|..|..|+.++|.+.|. ++||+||..++ .|.+-||+||...|.
T Consensus 55 In~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~ 133 (281)
T COG1091 55 INAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEE 133 (281)
T ss_pred EECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHH
Confidence 999998753 2345788999999999999999997 79999999885 467789999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCch-H----HHHHHHhCCCeEEecCCeeee----hh------hcccccccceEecc
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSLG-G----QVELVKEGKPYVMFGDGKLCA----YC------VLSEDKINQILPIG 291 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~~-~----~~~~~~~g~~~~~~g~g~~~~----~~------~~~~~~~~~~y~i~ 291 (405)
.+++ .+-+..|+|.+++||..+ + +++....|.++..+.|--... ++ +......+++||++
T Consensus 134 ~v~~-----~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~ 208 (281)
T COG1091 134 AVRA-----AGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLV 208 (281)
T ss_pred HHHH-----hCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEe
Confidence 9998 678899999999999753 3 456667788887765532211 11 12334455699999
Q ss_pred CCCCCCCHHHHHHHHHHHcCCCCCe
Q 043385 292 GPGKALTPLEQGEILFRLLGKEPKF 316 (405)
Q Consensus 292 ~~g~~~t~~ela~~l~~~~g~~~~~ 316 (405)
++ ...||-|+++.+.+..|.+..+
T Consensus 209 ~~-g~~Swydfa~~I~~~~~~~~~v 232 (281)
T COG1091 209 NS-GECSWYEFAKAIFEEAGVDGEV 232 (281)
T ss_pred CC-CcccHHHHHHHHHHHhCCCccc
Confidence 98 4689999999999999876533
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=223.57 Aligned_cols=223 Identities=17% Similarity=0.210 Sum_probs=167.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC---CeEEEEecCCCCcCCCCchhHhh--------------hc-----cCCcEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG---FNVIAIAREKSGIRGRNDKEETL--------------NQ-----LQGASV 140 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~--------------~~-----~~~v~~ 140 (405)
.++++|||||||||||++|++.|++.+ .+|+++.|.........+....+ .. ..++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 578999999999999999999999864 36899999876433222211000 00 157899
Q ss_pred EEcCCC-------CHHHHHHHHHhhCCCccEEEEcccccCC--CCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEccccc
Q 043385 141 CFSDVT-------NLESLEKSLENLGTSIDVVVSCLASRSG--GVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICV 210 (405)
Q Consensus 141 ~~~Dl~-------d~~~l~~~~~~~~~~~d~Vv~~a~~~~~--~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~ 210 (405)
+.||++ |.+.+.+++++ +|+|||+|+.... +....+++|+.|+.+++++|++. ++++|||+||.++
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~----vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~v 164 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKE----IDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYV 164 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhC----CCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEE
Confidence 999998 44556777777 9999999997543 34557899999999999999986 6899999999987
Q ss_pred cCC-----------------------------------------------------------------ChhHHHHHHHHH
Q 043385 211 QKP-----------------------------------------------------------------LLEFQRAKLKFE 225 (405)
Q Consensus 211 ~~~-----------------------------------------------------------------~~~y~~sK~~~E 225 (405)
|.. .+.|+.+|+.+|
T Consensus 165 yG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE 244 (491)
T PLN02996 165 CGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGE 244 (491)
T ss_pred ecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHH
Confidence 621 245999999999
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCc----hHHH----------HHHHhCCCeEEecCCeeeehhhc------------
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSL----GGQV----------ELVKEGKPYVMFGDGKLCAYCVL------------ 279 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~----~~~~----------~~~~~g~~~~~~g~g~~~~~~~~------------ 279 (405)
+++..++ .+++++++||++|||+. .+|+ ..+..|....++|+|.+.++++.
T Consensus 245 ~lv~~~~---~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~ 321 (491)
T PLN02996 245 MLLGNFK---ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM 321 (491)
T ss_pred HHHHHhc---CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence 9998765 48999999999999963 2232 22345666667899887772221
Q ss_pred -cc--c-cccceEeccCCC--CCCCHHHHHHHHHHHcCCC
Q 043385 280 -SE--D-KINQILPIGGPG--KALTPLEQGEILFRLLGKE 313 (405)
Q Consensus 280 -~~--~-~~~~~y~i~~~g--~~~t~~ela~~l~~~~g~~ 313 (405)
.. . ..+++||+++ | .++|+.|+++.+.+..+.-
T Consensus 322 ~~~~~~~~~~~vYNi~s-~~~~~~s~~ei~~~~~~~~~~~ 360 (491)
T PLN02996 322 AAHAGGQGSEIIYHVGS-SLKNPVKFSNLHDFAYRYFSKN 360 (491)
T ss_pred HHhhccCCCCcEEEecC-CCCCcccHHHHHHHHHHHhhhC
Confidence 11 1 2357999996 4 6899999999999988753
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-25 Score=206.54 Aligned_cols=220 Identities=17% Similarity=0.152 Sum_probs=156.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
..+++|||||||||||++++++|+++|++|++++|+..... .......+. ...+++++.+|++|.+.+.+++.+
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~-~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~---- 78 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETE-IEKEIRGLSCEEERLKVFDVDPLDYHSILDALKG---- 78 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhh-HHHHHHhcccCCCceEEEEecCCCHHHHHHHHcC----
Confidence 34678999999999999999999999999999999643211 000001111 123688999999999999999998
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccccc--C-C---------------Ch----
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQ--K-P---------------LL---- 215 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~--~-~---------------~~---- 215 (405)
+|.|+|.++.... .+.+.+++|+.|+.+++++|.+. +++|||++||..++ . + ..
T Consensus 79 ~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~ 158 (297)
T PLN02583 79 CSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRK 158 (297)
T ss_pred CCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhh
Confidence 9999998765432 23567899999999999999886 68999999997652 1 0 01
Q ss_pred ---hHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeee-----------hhhccc
Q 043385 216 ---EFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCA-----------YCVLSE 281 (405)
Q Consensus 216 ---~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~-----------~~~~~~ 281 (405)
.|+.+|..+|+++..++. ..++++++|||++||||..........+.. ...+++...+ .++. .
T Consensus 159 ~~~~Y~~sK~~aE~~~~~~~~-~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~-~~~~~~~~~~v~V~Dva~a~~~al~-~ 235 (297)
T PLN02583 159 FKLWHALAKTLSEKTAWALAM-DRGVNMVSINAGLLMGPSLTQHNPYLKGAA-QMYENGVLVTVDVNFLVDAHIRAFE-D 235 (297)
T ss_pred cccHHHHHHHHHHHHHHHHHH-HhCCcEEEEcCCcccCCCCCCchhhhcCCc-ccCcccCcceEEHHHHHHHHHHHhc-C
Confidence 599999999999988765 469999999999999996432111222221 2222332222 2222 2
Q ss_pred ccccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 282 DKINQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 282 ~~~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
...++.|+++++ ....+.++++++.+...
T Consensus 236 ~~~~~r~~~~~~-~~~~~~~~~~~~~~~~p 264 (297)
T PLN02583 236 VSSYGRYLCFNH-IVNTEEDAVKLAQMLSP 264 (297)
T ss_pred cccCCcEEEecC-CCccHHHHHHHHHHhCC
Confidence 334457999874 44556789999988764
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-24 Score=189.30 Aligned_cols=239 Identities=17% Similarity=0.255 Sum_probs=194.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+.++-.+-|+|||||+|++++.+|.+.|-+|++-.|..+... ..++.+..+..+-+...|+.|+++++++++.
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~---- 130 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH---- 130 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeecccccceeeeccCCCCHHHHHHHHHh----
Confidence 456778889999999999999999999999999999765321 1223344556788999999999999999998
Q ss_pred ccEEEEcccccCCCC-cchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-CCChhHHHHHHHHHHHHHHHhhhcCCce
Q 043385 162 IDVVVSCLASRSGGV-KDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ-KPLLEFQRAKLKFEAEMMKVAEEDSGFT 239 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~-~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~-~~~~~y~~sK~~~E~~~~~~~~~~~gi~ 239 (405)
.++|||+.|...+.. -.+.++|+.+.+.+...|+++||.|||++|+.++. ...+.|-.+|++.|..+++ .-..
T Consensus 131 sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~s~Sr~LrsK~~gE~aVrd-----afPe 205 (391)
T KOG2865|consen 131 SNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANVKSPSRMLRSKAAGEEAVRD-----AFPE 205 (391)
T ss_pred CcEEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccccChHHHHHhhhhhHHHHHh-----hCCc
Confidence 999999999754432 34678999999999999999999999999999876 4567899999999999998 4567
Q ss_pred EEEEecCCcccCchHHHHH----HHhCCCeEEecCCeeee--------------hhhcccccccceEeccCCCCCCCHHH
Q 043385 240 YSIVRPTAFFKSLGGQVEL----VKEGKPYVMFGDGKLCA--------------YCVLSEDKINQILPIGGPGKALTPLE 301 (405)
Q Consensus 240 ~~ilRp~~v~g~~~~~~~~----~~~g~~~~~~g~g~~~~--------------~~~~~~~~~~~~y~i~~~g~~~t~~e 301 (405)
.||+||..|||..++|++. .++-+.+++++.|.... .++.+++..|++|..+|| ..+...|
T Consensus 206 AtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP-~~yql~e 284 (391)
T KOG2865|consen 206 ATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGP-DRYQLSE 284 (391)
T ss_pred ceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCC-chhhHHH
Confidence 8999999999998877643 23356777888885433 445567888999999999 8999999
Q ss_pred HHHHHHHHcCCCCCeeecChHHHHHHHHHHHH
Q 043385 302 QGEILFRLLGKEPKFLKVPIGIMDFAIGVLDF 333 (405)
Q Consensus 302 la~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~ 333 (405)
+++.+-+....-..+.+.|.+.+..++...++
T Consensus 285 Lvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f 316 (391)
T KOG2865|consen 285 LVDIMYDMAREWPRYVRLPMPIFKAMAAARDF 316 (391)
T ss_pred HHHHHHHHHhhccccccCCcHHHHHHHhhhhe
Confidence 99999998877668888888777766655544
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-24 Score=202.16 Aligned_cols=217 Identities=18% Similarity=0.207 Sum_probs=148.9
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEEE
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVS 167 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv~ 167 (405)
||||||+||||+++++.|+++|++|++++|++.+... ... .. ..|+.+ ..+.+.+.+ +|+|||
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~---~~--~~~~~~-~~~~~~~~~----~D~Vvh 63 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGAN-------TKW---EG--YKPWAP-LAESEALEG----ADAVIN 63 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCc-------ccc---ee--eecccc-cchhhhcCC----CCEEEE
Confidence 6999999999999999999999999999998765421 000 01 113322 345556666 999999
Q ss_pred cccccCC--CC-----cchhHhHHHHHHHHHHHHHhcCCC--EEEEEccccccC--------------CChhHHHHHHHH
Q 043385 168 CLASRSG--GV-----KDSWKIDYEANRNSLVAGRNCGAS--HFVLLSAICVQK--------------PLLEFQRAKLKF 224 (405)
Q Consensus 168 ~a~~~~~--~~-----~~~~~~n~~g~~~ll~aa~~~~v~--~~V~~Ss~~~~~--------------~~~~y~~sK~~~ 224 (405)
+|+.... .+ ..++++|+.++++++++|++++++ +||+.|+.++|. +.+.|...+.+.
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~ 143 (292)
T TIGR01777 64 LAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDW 143 (292)
T ss_pred CCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHH
Confidence 9986432 12 246788999999999999999874 567677765552 112345556666
Q ss_pred HHHHHHHhhhcCCceEEEEecCCcccCchHHHHH----HHhCCCeEEecCCeeeehhh------------cccccccceE
Q 043385 225 EAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVEL----VKEGKPYVMFGDGKLCAYCV------------LSEDKINQIL 288 (405)
Q Consensus 225 E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~~~~~----~~~g~~~~~~g~g~~~~~~~------------~~~~~~~~~y 288 (405)
|+.+..+. +.+++++++||+.+|||..+.... ..... ...+|++++.+.++ ......+++|
T Consensus 144 e~~~~~~~--~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~ 220 (292)
T TIGR01777 144 EEAAQAAE--DLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGL-GGPLGSGRQWFSWIHIEDLVQLILFALENASISGPV 220 (292)
T ss_pred HHHhhhch--hcCCceEEEeeeeEECCCcchhHHHHHHHhcCc-ccccCCCCcccccEeHHHHHHHHHHHhcCcccCCce
Confidence 76655433 368999999999999986433221 22111 11256666555111 1222345799
Q ss_pred eccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHH
Q 043385 289 PIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDF 326 (405)
Q Consensus 289 ~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~ 326 (405)
|++++ +.+|+.|+++.+.+.+|.+.. .++|.+..+.
T Consensus 221 ~~~~~-~~~s~~di~~~i~~~~g~~~~-~~~p~~~~~~ 256 (292)
T TIGR01777 221 NATAP-EPVRNKEFAKALARALHRPAF-FPVPAFVLRA 256 (292)
T ss_pred EecCC-CccCHHHHHHHHHHHhCCCCc-CcCCHHHHHH
Confidence 99987 899999999999999998754 4588886554
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.6e-22 Score=200.22 Aligned_cols=223 Identities=13% Similarity=0.179 Sum_probs=157.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEecCCCCcCCCCchhHhhh-------------------ccCCcEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF---NVIAIAREKSGIRGRNDKEETLN-------------------QLQGASV 140 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~-------------------~~~~v~~ 140 (405)
.++++|||||||||||++|++.|++.+. +|+++.|.+.......+....+. ...++++
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 5789999999999999999999998753 68999997654332222111110 0246899
Q ss_pred EEcCCCCH------HHHHHHHHhhCCCccEEEEcccccCC--CCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccccc
Q 043385 141 CFSDVTNL------ESLEKSLENLGTSIDVVVSCLASRSG--GVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQ 211 (405)
Q Consensus 141 ~~~Dl~d~------~~l~~~~~~~~~~~d~Vv~~a~~~~~--~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~ 211 (405)
+.||++++ +..+.+.++ +|+|||+|+.... +.+..+++|+.|+.+++++|++. ++++|||+||.++|
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~~~----vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy 272 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIAKE----VDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN 272 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHHhc----CCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence 99999987 345555555 9999999997643 34567899999999999999887 47899999998875
Q ss_pred -----------CC-------------------------------------------------------------ChhHHH
Q 043385 212 -----------KP-------------------------------------------------------------LLEFQR 219 (405)
Q Consensus 212 -----------~~-------------------------------------------------------------~~~y~~ 219 (405)
-+ .+.|..
T Consensus 273 G~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~ 352 (605)
T PLN02503 273 GQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVF 352 (605)
T ss_pred cCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHH
Confidence 01 045889
Q ss_pred HHHHHHHHHHHHhhhcCCceEEEEecCCccc----CchHHHHH----------HHhCCCeEEecCCeeeeh---------
Q 043385 220 AKLKFEAEMMKVAEEDSGFTYSIVRPTAFFK----SLGGQVEL----------VKEGKPYVMFGDGKLCAY--------- 276 (405)
Q Consensus 220 sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g----~~~~~~~~----------~~~g~~~~~~g~g~~~~~--------- 276 (405)
+|+.+|+++++.. .+++++|+||+.|.+ |+++|++. ...|..-.++++++...+
T Consensus 353 TK~lAE~lV~~~~---~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvn 429 (605)
T PLN02503 353 TKAMGEMVINSMR---GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVN 429 (605)
T ss_pred HHHHHHHHHHHhc---CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHH
Confidence 9999999998754 589999999999943 33333322 122332234555544331
Q ss_pred ---hh-c--c--cccccceEeccCC-CCCCCHHHHHHHHHHHcCC
Q 043385 277 ---CV-L--S--EDKINQILPIGGP-GKALTPLEQGEILFRLLGK 312 (405)
Q Consensus 277 ---~~-~--~--~~~~~~~y~i~~~-g~~~t~~ela~~l~~~~g~ 312 (405)
++ . . ....+++||++++ ..++++.|+.+.+.+....
T Consensus 430 a~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 430 ATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred HHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 11 0 1 1234689999862 2689999999999886653
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-22 Score=187.54 Aligned_cols=160 Identities=21% Similarity=0.213 Sum_probs=127.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh---CCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL---GTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~---~~~ 161 (405)
.++||||||+|+||++++++|+++|++|++++|+++.... ... ....++.++.+|++|.+++.++++++ .++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~----~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 76 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD----LKA-RYGDRLWVLQLDVTDSAAVRAVVDRAFAALGR 76 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHH-hccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999999999999999999999999998654310 001 11236889999999999998887653 146
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc---CCChhHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ---KPLLEFQRAKLKFE 225 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E 225 (405)
+|+||||||.... .+...+++|+.++.++++++ ++.+.++||++||.+.. .+...|+.+|...|
T Consensus 77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 156 (276)
T PRK06482 77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIE 156 (276)
T ss_pred CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHH
Confidence 8999999997532 12346779999999999986 56677899999998764 35678999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFF 249 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~ 249 (405)
.+++.++.+ ..|++++++|||.+.
T Consensus 157 ~~~~~l~~~~~~~gi~v~~v~pg~~~ 182 (276)
T PRK06482 157 GFVEAVAQEVAPFGIEFTIVEPGPAR 182 (276)
T ss_pred HHHHHHHHHhhccCcEEEEEeCCccc
Confidence 999888764 469999999999883
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.7e-22 Score=202.94 Aligned_cols=190 Identities=15% Similarity=0.179 Sum_probs=139.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||+||||++|+++|+++|++|++++|.+... ..++++++.+|++|+. +.+++++ +|+|
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-----------~~~~ve~v~~Dl~d~~-l~~al~~----~D~V 64 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-----------LDPRVDYVCASLRNPV-LQELAGE----ADAV 64 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-----------ccCCceEEEccCCCHH-HHHHhcC----CCEE
Confidence 5899999999999999999999999999999875421 1247899999999985 7777777 9999
Q ss_pred EEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhhhcCCceEEEEec
Q 043385 166 VSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRP 245 (405)
Q Consensus 166 v~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp 245 (405)
||+|+.... ...++|+.|+.|++++|++.|+ ++||+||.+.. + ..|. ..|.++.. ++++++++|+
T Consensus 65 IHLAa~~~~---~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G~-~-~~~~----~aE~ll~~-----~~~p~~ILR~ 129 (699)
T PRK12320 65 IHLAPVDTS---APGGVGITGLAHVANAAARAGA-RLLFVSQAAGR-P-ELYR----QAETLVST-----GWAPSLVIRI 129 (699)
T ss_pred EEcCccCcc---chhhHHHHHHHHHHHHHHHcCC-eEEEEECCCCC-C-cccc----HHHHHHHh-----cCCCEEEEeC
Confidence 999986432 2235899999999999999998 79999987432 1 1232 46776654 6799999999
Q ss_pred CCcccCch-----HHH----HHHHhCCCeEEecCCeeee---hhhcccccccceEeccCCCCCCCHHHHHHHHHHH
Q 043385 246 TAFFKSLG-----GQV----ELVKEGKPYVMFGDGKLCA---YCVLSEDKINQILPIGGPGKALTPLEQGEILFRL 309 (405)
Q Consensus 246 ~~v~g~~~-----~~~----~~~~~g~~~~~~g~g~~~~---~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~ 309 (405)
+++|||.. +++ .....+.++.++--.+... .++. . ..+++|||+++ +.+|+.|+++.+...
T Consensus 130 ~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~-~-~~~GiyNIG~~-~~~Si~el~~~i~~~ 202 (699)
T PRK12320 130 APPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALN-T-DRNGVVDLATP-DTTNVVTAWRLLRSV 202 (699)
T ss_pred ceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHh-C-CCCCEEEEeCC-CeeEHHHHHHHHHHh
Confidence 99999842 222 2223455554321111111 1122 2 23459999997 899999998888665
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-23 Score=186.59 Aligned_cols=206 Identities=31% Similarity=0.438 Sum_probs=154.4
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEEE
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVS 167 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv~ 167 (405)
|+|+||||.+|+.+++.|++.+++|++++|+..+. ..+.+.. .+++++.+|+.|++++.++|++ +|+||+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~-----~~~~l~~-~g~~vv~~d~~~~~~l~~al~g----~d~v~~ 70 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSD-----RAQQLQA-LGAEVVEADYDDPESLVAALKG----VDAVFS 70 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHH-----HHHHHHH-TTTEEEES-TT-HHHHHHHHTT----CSEEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchh-----hhhhhhc-ccceEeecccCCHHHHHHHHcC----CceEEe
Confidence 79999999999999999999999999999998431 1133343 4889999999999999999999 999999
Q ss_pred cccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC------CChhHHHHHHHHHHHHHHHhhhcCCceEE
Q 043385 168 CLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK------PLLEFQRAKLKFEAEMMKVAEEDSGFTYS 241 (405)
Q Consensus 168 ~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~------~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ 241 (405)
+.+... ........++++||+++||+|||+.|....+. |..++...|..+|+++++ .+++++
T Consensus 71 ~~~~~~-------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~-----~~i~~t 138 (233)
T PF05368_consen 71 VTPPSH-------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRE-----SGIPYT 138 (233)
T ss_dssp ESSCSC-------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHH-----CTSEBE
T ss_pred ecCcch-------hhhhhhhhhHHHhhhccccceEEEEEecccccccccccccchhhhhhhhhhhhhhh-----ccccce
Confidence 877543 13466788999999999999999766555552 334566889999999988 799999
Q ss_pred EEecCCcccCchHHHHH---HHhCC-CeEEecCCee--ee------------hhhccccc--ccceEeccCCCCCCCHHH
Q 043385 242 IVRPTAFFKSLGGQVEL---VKEGK-PYVMFGDGKL--CA------------YCVLSEDK--INQILPIGGPGKALTPLE 301 (405)
Q Consensus 242 ilRp~~v~g~~~~~~~~---~~~g~-~~~~~g~g~~--~~------------~~~~~~~~--~~~~y~i~~~g~~~t~~e 301 (405)
+||||.+++++...+.. ..... .+.+.++++. .. .++..+.. .++.+.+++ +.+|+.|
T Consensus 139 ~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~--~~~t~~e 216 (233)
T PF05368_consen 139 IIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG--ETLTYNE 216 (233)
T ss_dssp EEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG--GEEEHHH
T ss_pred eccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC--CCCCHHH
Confidence 99999999886543333 22222 3556666552 11 22233433 467888876 6899999
Q ss_pred HHHHHHHHcCCCCCee
Q 043385 302 QGEILFRLLGKEPKFL 317 (405)
Q Consensus 302 la~~l~~~~g~~~~~~ 317 (405)
+++.+.+.+|++++++
T Consensus 217 ia~~~s~~~G~~v~y~ 232 (233)
T PF05368_consen 217 IAAILSKVLGKKVKYV 232 (233)
T ss_dssp HHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHCCccEEe
Confidence 9999999999987764
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=182.76 Aligned_cols=193 Identities=12% Similarity=0.110 Sum_probs=140.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
..|+||||||+||||++|+++|+++|++|+... +|+.|.+.+...++. .++|
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~--~~~D 59 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDA--VKPT 59 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHh--cCCC
Confidence 458999999999999999999999999986431 244556667766764 2589
Q ss_pred EEEEcccccCC--------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---------------------CCC
Q 043385 164 VVVSCLASRSG--------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---------------------KPL 214 (405)
Q Consensus 164 ~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---------------------~~~ 214 (405)
+|||+|+.... ++.+.+++|+.++.+++++|++.|+++++ +||.++| .+.
T Consensus 60 ~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~-~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~ 138 (298)
T PLN02778 60 HVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTN-YATGCIFEYDDAHPLGSGIGFKEEDTPNFTG 138 (298)
T ss_pred EEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEE-EecceEeCCCCCCCcccCCCCCcCCCCCCCC
Confidence 99999997531 22457889999999999999999997555 4543332 012
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCc----hHHHHHHHhCCCeEEecCCeeee--hhh------cccc
Q 043385 215 LEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL----GGQVELVKEGKPYVMFGDGKLCA--YCV------LSED 282 (405)
Q Consensus 215 ~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~----~~~~~~~~~g~~~~~~g~g~~~~--~~~------~~~~ 282 (405)
+.|+.+|..+|.+++.++ +..++|+...+++. ..++..+..+.++...+. .... +++ ....
T Consensus 139 s~Yg~sK~~~E~~~~~y~------~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~~-s~~yv~D~v~al~~~l~~~ 211 (298)
T PLN02778 139 SFYSKTKAMVEELLKNYE------NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPN-SMTILDELLPISIEMAKRN 211 (298)
T ss_pred CchHHHHHHHHHHHHHhh------ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcCC-CCEEHHHHHHHHHHHHhCC
Confidence 579999999999998753 35677887766642 356777777776555443 2222 222 1222
Q ss_pred cccceEeccCCCCCCCHHHHHHHHHHHcCCCC
Q 043385 283 KINQILPIGGPGKALTPLEQGEILFRLLGKEP 314 (405)
Q Consensus 283 ~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~ 314 (405)
.+++||++++ +.+|+.|+++.+++.+|...
T Consensus 212 -~~g~yNigs~-~~iS~~el~~~i~~~~~~~~ 241 (298)
T PLN02778 212 -LTGIYNFTNP-GVVSHNEILEMYRDYIDPSF 241 (298)
T ss_pred -CCCeEEeCCC-CcccHHHHHHHHHHHhCCCc
Confidence 2479999986 79999999999999999654
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-21 Score=179.38 Aligned_cols=155 Identities=32% Similarity=0.457 Sum_probs=120.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC-HHHHHHHH-HhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN-LESLEKSL-ENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~-~~~~~ 160 (405)
..+|+|+||||||+||++++++|+++|++|++++|++++.. .......+++++.+|++| .+.+.+.+ .+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~------~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~--- 85 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAK------TSLPQDPSLQIVRADVTEGSDKLVEAIGDD--- 85 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHH------HhcccCCceEEEEeeCCCCHHHHHHHhhcC---
Confidence 45689999999999999999999999999999999876431 111112368999999998 46677777 45
Q ss_pred CccEEEEcccccCC-CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC-----C-hh---------HHHHHHHH
Q 043385 161 SIDVVVSCLASRSG-GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP-----L-LE---------FQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~-~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~-----~-~~---------y~~sK~~~ 224 (405)
+|+|||++|.... +....+++|..++.++++++++.+++|||++||.++|.. . .. |...|..+
T Consensus 86 -~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~ 164 (251)
T PLN00141 86 -SDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQA 164 (251)
T ss_pred -CCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHH
Confidence 9999999886421 223346789999999999999999999999999987631 1 11 23457777
Q ss_pred HHHHHHHhhhcCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
|++++. .++++++||||+++++.
T Consensus 165 e~~l~~-----~gi~~~iirpg~~~~~~ 187 (251)
T PLN00141 165 EKYIRK-----SGINYTIVRPGGLTNDP 187 (251)
T ss_pred HHHHHh-----cCCcEEEEECCCccCCC
Confidence 877765 79999999999999864
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-22 Score=196.94 Aligned_cols=163 Identities=24% Similarity=0.385 Sum_probs=129.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-----h--ccCCcEEEEcCCCCHHHHHHHH
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-----N--QLQGASVCFSDVTNLESLEKSL 155 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-----~--~~~~v~~~~~Dl~d~~~l~~~~ 155 (405)
..+++||||||+|+||++++++|+++|++|++++|+.++.......+... . ...+++++.+|+.|.+++.+++
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 45689999999999999999999999999999999876542111110000 0 0125789999999999999998
Q ss_pred HhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-C--------CChhHHHHHHH
Q 043385 156 ENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ-K--------PLLEFQRAKLK 223 (405)
Q Consensus 156 ~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~-~--------~~~~y~~sK~~ 223 (405)
.+ +|+||||+|.... ++...+++|+.|+.+++++|++.+++|||++||.+++ . ....|...|..
T Consensus 158 gg----iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~Kra 233 (576)
T PLN03209 158 GN----ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRK 233 (576)
T ss_pred cC----CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHH
Confidence 87 9999999987532 3345678999999999999999999999999999874 1 12346678888
Q ss_pred HHHHHHHHhhhcCCceEEEEecCCcccCchH
Q 043385 224 FEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG 254 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~ 254 (405)
+|+++.. .|++|++||||+++++...
T Consensus 234 aE~~L~~-----sGIrvTIVRPG~L~tp~d~ 259 (576)
T PLN03209 234 AEEALIA-----SGLPYTIVRPGGMERPTDA 259 (576)
T ss_pred HHHHHHH-----cCCCEEEEECCeecCCccc
Confidence 8888875 7999999999999987543
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=170.97 Aligned_cols=138 Identities=28% Similarity=0.480 Sum_probs=122.3
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEEE
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVS 167 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv~ 167 (405)
|+|+||||++|+.++++|+++|++|++++|++++.. . .++++++.+|+.|++.+.+++++ +|+|||
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~-------~---~~~~~~~~~d~~d~~~~~~al~~----~d~vi~ 66 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAE-------D---SPGVEIIQGDLFDPDSVKAALKG----ADAVIH 66 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHH-------H---CTTEEEEESCTTCHHHHHHHHTT----SSEEEE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcc-------c---ccccccceeeehhhhhhhhhhhh----cchhhh
Confidence 799999999999999999999999999999987642 1 46999999999999999999998 999999
Q ss_pred cccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC--C----------hhHHHHHHHHHHHHHHHhhhc
Q 043385 168 CLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP--L----------LEFQRAKLKFEAEMMKVAEED 235 (405)
Q Consensus 168 ~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~--~----------~~y~~sK~~~E~~~~~~~~~~ 235 (405)
+++.... +...+++++++++++|++|+|++|+.+++.. . ..|...|..+|+.++.
T Consensus 67 ~~~~~~~--------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~----- 133 (183)
T PF13460_consen 67 AAGPPPK--------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRE----- 133 (183)
T ss_dssp CCHSTTT--------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHH-----
T ss_pred hhhhhcc--------cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHh-----
Confidence 9976543 3788999999999999999999999999842 1 2688999999988875
Q ss_pred CCceEEEEecCCcccCc
Q 043385 236 SGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 236 ~gi~~~ilRp~~v~g~~ 252 (405)
.+++|+++||+++||+.
T Consensus 134 ~~~~~~ivrp~~~~~~~ 150 (183)
T PF13460_consen 134 SGLNWTIVRPGWIYGNP 150 (183)
T ss_dssp STSEEEEEEESEEEBTT
T ss_pred cCCCEEEEECcEeEeCC
Confidence 69999999999999984
|
... |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-22 Score=185.76 Aligned_cols=156 Identities=21% Similarity=0.341 Sum_probs=105.9
Q ss_pred EEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhh-----------hccCCcEEEEcCCCCH------HH
Q 043385 90 VVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETL-----------NQLQGASVCFSDVTNL------ES 150 (405)
Q Consensus 90 VtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~-----------~~~~~v~~~~~Dl~d~------~~ 150 (405)
|||||||+|++|+++|++++. +|+++.|.........+..+.+ ....+++++.||++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 8999999875422111111110 1246899999999975 45
Q ss_pred HHHHHHhhCCCccEEEEcccccC--CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-----------------
Q 043385 151 LEKSLENLGTSIDVVVSCLASRS--GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ----------------- 211 (405)
Q Consensus 151 l~~~~~~~~~~~d~Vv~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~----------------- 211 (405)
+.++.+. +|+|||||+..+ .+..+..++|+.||+++++.|.+.+.++|+|+||..+.
T Consensus 81 ~~~L~~~----v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~ 156 (249)
T PF07993_consen 81 YQELAEE----VDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEED 156 (249)
T ss_dssp HHHHHHH------EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--
T ss_pred hhccccc----cceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccc
Confidence 6667677 999999999765 35567889999999999999998777799999995332
Q ss_pred ------CCChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCccc
Q 043385 212 ------KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFK 250 (405)
Q Consensus 212 ------~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g 250 (405)
...++|..||..+|+++++++. +.|++++|+|||.|+|
T Consensus 157 ~~~~~~~~~~gY~~SK~~aE~~l~~a~~-~~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 157 DLDPPQGFPNGYEQSKWVAERLLREAAQ-RHGLPVTIYRPGIIVG 200 (249)
T ss_dssp EEE--TTSEE-HHHHHHHHHHHHHHHHH-HH---EEEEEE-EEE-
T ss_pred cchhhccCCccHHHHHHHHHHHHHHHHh-cCCceEEEEecCcccc
Confidence 1235799999999999999876 3599999999999999
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.9e-22 Score=174.14 Aligned_cols=293 Identities=18% Similarity=0.169 Sum_probs=197.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchh--HhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKE--ETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~--~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+|+.||||-||+-|++|++.|+++||+|.++.|+.+......-.+ ......+++.++.||++|...+.++++.+ ++
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v--~P 79 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV--QP 79 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc--Cc
Confidence 578999999999999999999999999999999855432110011 11112245889999999999999999985 79
Q ss_pred cEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCC--CEEEEEcccccc--------------CCChhHHHHH
Q 043385 163 DVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGA--SHFVLLSAICVQ--------------KPLLEFQRAK 221 (405)
Q Consensus 163 d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v--~~~V~~Ss~~~~--------------~~~~~y~~sK 221 (405)
|-|+|+|+... ..+....+++..|+.+++++.+..|. -||...||...| .|.+||+.+|
T Consensus 80 dEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAK 159 (345)
T COG1089 80 DEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 159 (345)
T ss_pred hhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHH
Confidence 99999998643 34556778899999999999998874 388888887665 4778999999
Q ss_pred HHHHHHHHHHhhhcCCceEEEEecCCcccCch----------HHHHHHHhCCCe-EEecCCeeeehh-----------hc
Q 043385 222 LKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG----------GQVELVKEGKPY-VMFGDGKLCAYC-----------VL 279 (405)
Q Consensus 222 ~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------~~~~~~~~g~~~-~~~g~g~~~~~~-----------~~ 279 (405)
..+-.....+.+ .+|+-.|.=...+==+|.. ..+..++.|..- ..+|+-+..+|+ +.
T Consensus 160 lYa~W~tvNYRe-sYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlm 238 (345)
T COG1089 160 LYAYWITVNYRE-SYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLM 238 (345)
T ss_pred HHHHheeeehHh-hcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHH
Confidence 998887777665 6787766433222223432 123445555432 235665555522 22
Q ss_pred ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhh
Q 043385 280 SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESM 359 (405)
Q Consensus 280 ~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (405)
........|.|+. |+..|++|+++...+..|....+..--.......+.-...+.++.+....+. .-..
T Consensus 239 LQq~~PddyViAT-g~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPa----------EV~~ 307 (345)
T COG1089 239 LQQEEPDDYVIAT-GETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPA----------EVDL 307 (345)
T ss_pred HccCCCCceEEec-CceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCch----------hhhh
Confidence 3334478999987 6999999999999999997665532111111000000000001111111111 2244
Q ss_pred cccCccccccccccCCccchhhHHHHHHHHhhccc
Q 043385 360 LILDPETGEYSAEKTPSYGKDTLEEFFERVLREGM 394 (405)
Q Consensus 360 ~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~~~~ 394 (405)
+.-|+++++..|||+| ..+|++-++.+++.-.
T Consensus 308 Llgdp~KA~~~LGW~~---~~~~~elv~~Mv~~dl 339 (345)
T COG1089 308 LLGDPTKAKEKLGWRP---EVSLEELVREMVEADL 339 (345)
T ss_pred hcCCHHHHHHHcCCcc---ccCHHHHHHHHHHHHH
Confidence 5579999999999999 7788888888887543
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.1e-22 Score=184.40 Aligned_cols=160 Identities=20% Similarity=0.273 Sum_probs=131.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhh--------ccCCcEEEEcCCCC------HHH
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLN--------QLQGASVCFSDVTN------LES 150 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~--------~~~~v~~~~~Dl~d------~~~ 150 (405)
++||+||||||+|++++.+|+.+- .+|+|++|-.+...+..+..+... ...+++++.||+.. ...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999999999999885 599999998764332222222222 12589999999984 456
Q ss_pred HHHHHHhhCCCccEEEEcccccC--CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-----------------
Q 043385 151 LEKSLENLGTSIDVVVSCLASRS--GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ----------------- 211 (405)
Q Consensus 151 l~~~~~~~~~~~d~Vv~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~----------------- 211 (405)
++++.+. +|.||||++..+ .+..+....||.||..+++.|.....|.++|+||++++
T Consensus 81 ~~~La~~----vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~ 156 (382)
T COG3320 81 WQELAEN----VDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISP 156 (382)
T ss_pred HHHHhhh----cceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccc
Confidence 8888777 999999999765 35566778999999999999998888999999999885
Q ss_pred ------CCChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccC
Q 043385 212 ------KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 212 ------~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~ 251 (405)
.+.++|++||+.+|.++++... .|++++|+|||+|.|+
T Consensus 157 ~~~~~~~~~~GY~~SKwvaE~Lvr~A~~--rGLpv~I~Rpg~I~gd 200 (382)
T COG3320 157 TRNVGQGLAGGYGRSKWVAEKLVREAGD--RGLPVTIFRPGYITGD 200 (382)
T ss_pred cccccCccCCCcchhHHHHHHHHHHHhh--cCCCeEEEecCeeecc
Confidence 2346899999999999999886 6999999999999986
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-21 Score=168.97 Aligned_cols=206 Identities=19% Similarity=0.233 Sum_probs=152.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
.++|.|+|||||++||.+++++|+++|++|++..|+.++++.... .+.. ..+..+..|++|.+++.++++...
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~---~~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~ 79 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALAD---EIGA-GAALALALDVTDRAAVEAAIEALPEEF 79 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHH---hhcc-CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence 456899999999999999999999999999999999987642211 1111 257889999999999877776442
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccc---cCCChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICV---QKPLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~---~~~~~~y~~sK~~ 223 (405)
+++|++|||||.... +|+.++++|+.| ++.++..+.+++-++||++||+++ |...+.|+.+|+.
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~a 159 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAA 159 (246)
T ss_pred CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHH
Confidence 679999999997643 566789999998 455666678888789999999985 4566789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCHHH
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTPLE 301 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~~e 301 (405)
+.++...+..+ ..+++++.|-||.+-...... + ...|+. ....++|. + +..++..|
T Consensus 160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~---------v--~~~g~~--------~~~~~~y~--~-~~~l~p~d 217 (246)
T COG4221 160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFST---------V--RFEGDD--------ERADKVYK--G-GTALTPED 217 (246)
T ss_pred HHHHHHHHHHHhcCCCeeEEEecCceecceeccc---------c--cCCchh--------hhHHHHhc--c-CCCCCHHH
Confidence 99988887776 479999999999885532110 0 001110 01111222 1 26788899
Q ss_pred HHHHHHHHcCCCC
Q 043385 302 QGEILFRLLGKEP 314 (405)
Q Consensus 302 la~~l~~~~g~~~ 314 (405)
+++.+.-++..|.
T Consensus 218 IA~~V~~~~~~P~ 230 (246)
T COG4221 218 IAEAVLFAATQPQ 230 (246)
T ss_pred HHHHHHHHHhCCC
Confidence 9999988876653
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=177.67 Aligned_cols=227 Identities=8% Similarity=0.060 Sum_probs=160.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++||||||+|+||++++++|+++|++|++++|+.+..... ...+.. ..++.++.+|++|.+++.++++++.
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRA---VAELRAQGAEVLGVRTDVSDAAQVEALADAALER 80 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999976543211 111111 2357789999999999998887642
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCC------CEEEEEccccccC---CChh
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGA------SHFVLLSAICVQK---PLLE 216 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v------~~~V~~Ss~~~~~---~~~~ 216 (405)
+++|+||||||.... .+...+++|+.++.+++++ +.+.+. +++|++||..++. +...
T Consensus 81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~ 160 (287)
T PRK06194 81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGI 160 (287)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcc
Confidence 468999999997532 1233578999998876665 555543 5899999988763 3467
Q ss_pred HHHHHHHHHHHHHHHhhh----cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccC
Q 043385 217 FQRAKLKFEAEMMKVAEE----DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGG 292 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~ 292 (405)
|+.+|...|.+++.++.+ ..+++++.+.||.+..+... ...+++..+.+++.+.++.....+...... ..
T Consensus 161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 234 (287)
T PRK06194 161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQ----SERNRPADLANTAPPTRSQLIAQAMSQKAV--GS 234 (287)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccc----ccccCchhcccCccccchhhHHHHHHHhhh--hc
Confidence 999999999999887764 34689999999888766432 223455566677776664443333222211 11
Q ss_pred CCCCCCHHHHHHHHHHHcCCCCCeeecC
Q 043385 293 PGKALTPLEQGEILFRLLGKEPKFLKVP 320 (405)
Q Consensus 293 ~g~~~t~~ela~~l~~~~g~~~~~~~~p 320 (405)
..++..|+++.+.+.++.+..++..+
T Consensus 235 --~~~s~~dva~~i~~~~~~~~~~~~~~ 260 (287)
T PRK06194 235 --GKVTAEEVAQLVFDAIRAGRFYIYSH 260 (287)
T ss_pred --cCCCHHHHHHHHHHHHHcCCeEEEcC
Confidence 24789999999999876554444433
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.4e-21 Score=198.86 Aligned_cols=193 Identities=12% Similarity=0.103 Sum_probs=139.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
...|+||||||+||||++|++.|.++|++|.. ..+|++|.+.+.+.++. .++
T Consensus 378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------------~~~~l~d~~~v~~~i~~--~~p 429 (668)
T PLN02260 378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------------GKGRLEDRSSLLADIRN--VKP 429 (668)
T ss_pred CCCceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------------eccccccHHHHHHHHHh--hCC
Confidence 35579999999999999999999999988731 11467888888888875 359
Q ss_pred cEEEEcccccC---C-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------------C-
Q 043385 163 DVVVSCLASRS---G-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------------P- 213 (405)
Q Consensus 163 d~Vv~~a~~~~---~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------------~- 213 (405)
|+|||||+... . ++...+++|+.++.+++++|++.|++ +|++||.++|. |
T Consensus 430 d~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~ 508 (668)
T PLN02260 430 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFT 508 (668)
T ss_pred CEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCC
Confidence 99999999752 1 23457889999999999999999996 55666654321 2
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccC----chHHHHHHHhCCCeEEecCCeeeeh-hh-----ccccc
Q 043385 214 LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKS----LGGQVELVKEGKPYVMFGDGKLCAY-CV-----LSEDK 283 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~----~~~~~~~~~~g~~~~~~g~g~~~~~-~~-----~~~~~ 283 (405)
.+.|+.+|.++|++++.+. ++.++|+.++|+. ..+|+..+.+......++.+....+ ++ .....
T Consensus 509 ~~~Yg~sK~~~E~~~~~~~------~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~~~~l~~~~ 582 (668)
T PLN02260 509 GSFYSKTKAMVEELLREYD------NVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRN 582 (668)
T ss_pred CChhhHHHHHHHHHHHhhh------hheEEEEEEecccCCCCccHHHHHHhccceeeccCCCceehhhHHHHHHHHHHhC
Confidence 2679999999999998742 3556666666642 3467766665544322333333221 21 11223
Q ss_pred ccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 284 INQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 284 ~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
.+++||++++ ..+|+.|+++.+.+.++
T Consensus 583 ~~giyni~~~-~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 583 LRGIWNFTNP-GVVSHNEILEMYKDYID 609 (668)
T ss_pred CCceEEecCC-CcCcHHHHHHHHHHhcC
Confidence 3689999997 69999999999999875
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.9e-21 Score=178.01 Aligned_cols=168 Identities=18% Similarity=0.196 Sum_probs=132.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++||||||+|+||+++++.|+++|++|++++|++++..... +.+.. ...+.++++|++|.+.+.++++.+.
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVA---DEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE 80 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH---HHHHhcCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999875432111 11111 1357789999999999988877542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHH-HhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAG-RNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa-~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||+|.... .++..+++|+.+ ++++++++ ++.+.++||++||...+. +...|+.+
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~s 160 (262)
T PRK13394 81 RFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTA 160 (262)
T ss_pred HcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHH
Confidence 468999999997432 123456789999 77788888 677789999999987653 34679999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|...+.+++.++.+ ..+++++++|||.++++.
T Consensus 161 k~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~ 194 (262)
T PRK13394 161 KHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPL 194 (262)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchh
Confidence 99999999888764 368999999999999986
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.9e-21 Score=177.16 Aligned_cols=163 Identities=17% Similarity=0.176 Sum_probs=128.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh---C
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL---G 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~---~ 159 (405)
++++||||||+|+||++++++|+++|++|++++|++++.. ..... ...+..+.+|++|++++.++++.+ .
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLA------DLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHH------HHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999999875432 11111 135788899999999998887754 2
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccCC---ChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQKP---LLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~~ 223 (405)
+++|+||||||.... ++.+.+++|+.++.++++++ ++.+.+++|++||.+.+.+ ...|+.+|..
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa 155 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWA 155 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHH
Confidence 568999999997532 23446789999976666654 5667789999999887643 4679999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|++++++|||.+..+.
T Consensus 156 ~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~ 186 (275)
T PRK08263 156 LEGMSEALAQEVAEFGIKVTLVEPGGYSTDW 186 (275)
T ss_pred HHHHHHHHHHHhhhhCcEEEEEecCCccCCc
Confidence 99998887764 479999999999987764
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=176.79 Aligned_cols=162 Identities=16% Similarity=0.225 Sum_probs=130.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|+||||+|+||++++++|+++|++|++++|++++.. .+.. ..++.++.+|++|++++.++++++.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-------~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 75 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA-------DFEALHPDRALARLLDVTDFDAIDAVVADAEAT 75 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH-------HHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999875431 1111 1357889999999999988887642
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... .+.+.+++|+.++.++++++ ++.+.++||++||.... .+...|+.+|.
T Consensus 76 ~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~ 155 (277)
T PRK06180 76 FGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKF 155 (277)
T ss_pred hCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHH
Confidence 468999999997532 12345889999999888874 44566799999998775 34578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..|.+++.++.+ ..|++++++|||++++++
T Consensus 156 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 187 (277)
T PRK06180 156 ALEGISESLAKEVAPFGIHVTAVEPGSFRTDW 187 (277)
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence 999999888764 469999999999998874
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-20 Score=176.79 Aligned_cols=229 Identities=20% Similarity=0.218 Sum_probs=155.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++||||||+|+||+++++.|+++|++|++++|++++...............++.++.+|+.|++++.++++.+.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999865432111111111111367888999999999988877531
Q ss_pred CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||+|.... .+...+++|+.+..++++++.+ .+.++||++||...+. +...|+.+|.
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~ 164 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKS 164 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHH
Confidence 368999999985311 1234678899998888876543 3456999999998874 3578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCchHH-------HHHHHhCCCeEEecCCeeee----hhhccc--ccccce
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQ-------VELVKEGKPYVMFGDGKLCA----YCVLSE--DKINQI 287 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~-------~~~~~~g~~~~~~g~g~~~~----~~~~~~--~~~~~~ 287 (405)
..|.+++.++.+ ..+++++++|||.+.++.... ........+...+++..... .++..+ ...+++
T Consensus 165 a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~ 244 (276)
T PRK05875 165 AVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQV 244 (276)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCE
Confidence 999999988764 468999999999998764321 11111222222222211111 122222 224788
Q ss_pred EeccCCCCCC----CHHHHHHHHHHHcCC
Q 043385 288 LPIGGPGKAL----TPLEQGEILFRLLGK 312 (405)
Q Consensus 288 y~i~~~g~~~----t~~ela~~l~~~~g~ 312 (405)
|++.+ |..+ +..|+++.+.+..|.
T Consensus 245 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 245 INVDG-GHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred EEECC-CeeccCCccHHHHHHHHhhHHHH
Confidence 99987 3665 777777777655543
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-20 Score=172.11 Aligned_cols=169 Identities=17% Similarity=0.124 Sum_probs=128.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.++++||||||+|+||++++++|+++|++|++++|+..+... .....+.. ...+.++.+|++|.+++.++++.+.
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEAD--ALAAELNALRPGSAAALQADLLDPDALPELVAACVA 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHH--HHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999987432110 00011111 1257889999999999998887531
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc---CCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC---GASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~---~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.++++++... .-++++++++.... .+...|+.+|.
T Consensus 82 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 161 (249)
T PRK09135 82 AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKA 161 (249)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHH
Confidence 468999999996421 12447789999999999998642 22467777776554 45678999999
Q ss_pred HHHHHHHHHhhh-cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE-DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~~ 253 (405)
.+|.+++.++.+ ..+++++++|||.+++|..
T Consensus 162 ~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~ 193 (249)
T PRK09135 162 ALEMLTRSLALELAPEVRVNAVAPGAILWPED 193 (249)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEeccccCccc
Confidence 999999998864 2479999999999999853
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=173.82 Aligned_cols=158 Identities=20% Similarity=0.243 Sum_probs=130.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
+++|+||||+|+||++++++|+++|++|++++|++++.. ...+++++++|++|+++++++++++. ++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~----------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 73 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA----------PIPGVELLELDVTDDASVQAAVDEVIARAGR 73 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----------ccCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999999875431 12478899999999999999888652 56
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccCC---ChhHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQKP---LLEFQRAKLKFE 225 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~~~E 225 (405)
+|+||||||.... ++...+++|+.++.+++++ +++.+.++||++||...+.+ ...|+.+|...|
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 153 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE 153 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence 8999999997532 2345788999997777766 56678899999999877643 467999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+++.++.+ ..|+++++++||++.+++
T Consensus 154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~ 182 (270)
T PRK06179 154 GYSESLDHEVRQFGIRVSLVEPAYTKTNF 182 (270)
T ss_pred HHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence 998887764 579999999999998875
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-20 Score=171.07 Aligned_cols=209 Identities=20% Similarity=0.246 Sum_probs=158.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++++|||||++||.+++++|+++|++|+++.|+.+++...++.++.... -.++++.+|++|++++.+..+.+.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~-v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTG-VEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhC-ceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 5678999999999999999999999999999999999987654444333332 367899999999999888776543
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccccCCC---hhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQKPL---LEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~~~~---~~y~~sK~~ 223 (405)
.++|++|||||.... ...+++++|+.+ |+.++.-+.+.+-++||+++|.+++.|. ..|+.||+.
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~ 162 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAF 162 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHH
Confidence 369999999997532 223478999988 6667777888888899999999998653 569999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEec-cCCCCCCCHH
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPI-GGPGKALTPL 300 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i-~~~g~~~t~~ 300 (405)
+-.+...+..| ..|+.++.|.||.+..++.. . .+.. .+.. .+- ..++..
T Consensus 163 v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~----~~~~----------------------~~~~~~~~-~~~~~~ 214 (265)
T COG0300 163 VLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A----KGSD----------------------VYLLSPGE-LVLSPE 214 (265)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c----cccc----------------------cccccchh-hccCHH
Confidence 88877777665 67899999999998876532 1 0000 0100 011 456788
Q ss_pred HHHHHHHHHcCCCCCeeecC
Q 043385 301 EQGEILFRLLGKEPKFLKVP 320 (405)
Q Consensus 301 ela~~l~~~~g~~~~~~~~p 320 (405)
++++...+.+++....+..+
T Consensus 215 ~va~~~~~~l~~~k~~ii~~ 234 (265)
T COG0300 215 DVAEAALKALEKGKREIIPG 234 (265)
T ss_pred HHHHHHHHHHhcCCceEecC
Confidence 99999999888765555444
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-20 Score=175.25 Aligned_cols=161 Identities=19% Similarity=0.282 Sum_probs=132.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC----C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG----T 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~----~ 160 (405)
+++|+||||+|+||++++++|+++|++|++++|+++.. +.+.. .+++++.+|++|.+++.++++.+. +
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~-------~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g 75 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV-------AALEA-EGLEAFQLDYAEPESIAALVAQVLELSGG 75 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHH-CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999987653 22222 368899999999999888887642 4
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
++|+||||||.... .+...+++|+.| ++++++.+++.+.++||++||..++. +...|+.+|++.
T Consensus 76 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 155 (277)
T PRK05993 76 RLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAI 155 (277)
T ss_pred CccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHH
Confidence 68999999986432 123467899998 77788888888888999999988763 357899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+.+.++.+ ..|+++++|+||.+-.++.
T Consensus 156 ~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~ 186 (277)
T PRK05993 156 EGLSLTLRMELQGSGIHVSLIEPGPIETRFR 186 (277)
T ss_pred HHHHHHHHHHhhhhCCEEEEEecCCccCchh
Confidence 9998887654 5799999999999987753
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=179.93 Aligned_cols=165 Identities=20% Similarity=0.222 Sum_probs=129.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++|+||||+|+||++++++|+++|++|++++|+.++.. +......++.++.+|++|.++++++++.+.
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~------~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAR------EALAGIDGVEVVMLDLADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcC
Confidence 46789999999999999999999999999999999865432 112222358899999999999988887542
Q ss_pred CCccEEEEcccccCC-------CCcchhHhHHHHH----HHHHHHHHhcCCCEEEEEcccccc---------------CC
Q 043385 160 TSIDVVVSCLASRSG-------GVKDSWKIDYEAN----RNSLVAGRNCGASHFVLLSAICVQ---------------KP 213 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~-------~~~~~~~~n~~g~----~~ll~aa~~~~v~~~V~~Ss~~~~---------------~~ 213 (405)
+++|+||||||.... .++..+++|+.++ +.+++.+++.+.++||++||.+.. .+
T Consensus 98 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~ 177 (315)
T PRK06196 98 RRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDK 177 (315)
T ss_pred CCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCCh
Confidence 479999999996421 2345678999995 455556666666799999997542 23
Q ss_pred ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 214 LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
...|+.+|.+.+.+.+.++.+ ..|+++++++||++.+++.
T Consensus 178 ~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 178 WLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ 219 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence 357999999999998887654 4689999999999999853
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.7e-20 Score=165.32 Aligned_cols=220 Identities=17% Similarity=0.219 Sum_probs=152.7
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEEE
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVS 167 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv~ 167 (405)
|+||||||+||++|+.+|.+.||+|++++|++.+.. .... ..+. ..+.+...... ++|+|||
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~------~~~~--~~v~-------~~~~~~~~~~~---~~DavIN 62 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS------QNLH--PNVT-------LWEGLADALTL---GIDAVIN 62 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh------hhcC--cccc-------ccchhhhcccC---CCCEEEE
Confidence 689999999999999999999999999999987643 1111 1111 12223333331 3999999
Q ss_pred cccccCC--CCc-----chhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccCC-----------C-hh-HHHHHHHHH
Q 043385 168 CLASRSG--GVK-----DSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQKP-----------L-LE-FQRAKLKFE 225 (405)
Q Consensus 168 ~a~~~~~--~~~-----~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~~-----------~-~~-y~~sK~~~E 225 (405)
+||..-. .|. ...+.-+..|+.+.++..+. +.+.+|.-|.++.|.. . +. -+.....-|
T Consensus 63 LAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE 142 (297)
T COG1090 63 LAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWE 142 (297)
T ss_pred CCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHH
Confidence 9996422 132 35566777899999988744 5667777777766621 1 11 223334445
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCchHHHHHHHhC---CCeEEecCCeeeehh------------hcccccccceEec
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEG---KPYVMFGDGKLCAYC------------VLSEDKINQILPI 290 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g---~~~~~~g~g~~~~~~------------~~~~~~~~~~y~i 290 (405)
+...... ..|.+++++|.|.|.++.++++..+..- ..--.+|+|.|+..+ +.+.....+.||+
T Consensus 143 ~~a~~a~--~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~ 220 (297)
T COG1090 143 EEALQAQ--QLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNL 220 (297)
T ss_pred HHHhhhh--hcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccc
Confidence 5554433 4799999999999999987766444321 111247999998733 3344456789999
Q ss_pred cCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHH
Q 043385 291 GGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIG 329 (405)
Q Consensus 291 ~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~ 329 (405)
++| .+++..|+++.+++++++|.. .++|...++...+
T Consensus 221 taP-~PV~~~~F~~al~r~l~RP~~-~~vP~~~~rl~LG 257 (297)
T COG1090 221 TAP-NPVRNKEFAHALGRALHRPAI-LPVPSFALRLLLG 257 (297)
T ss_pred cCC-CcCcHHHHHHHHHHHhCCCcc-ccCcHHHHHHHhh
Confidence 999 899999999999999997654 5889888887765
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-20 Score=175.77 Aligned_cols=168 Identities=19% Similarity=0.237 Sum_probs=128.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh---CC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL---GT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~---~~ 160 (405)
++++||||||+|+||+++++.|+++|++|++++|+++................+++++.+|++|++++.+ ++.+ .+
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 4578999999999999999999999999999999876442111111111111368899999999999887 6543 25
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEcccccc---CCChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQ---KPLLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~ 224 (405)
++|+||||+|.... .+.+.+++|+.++.+++++ +++.+.++||++||.... .+...|+.+|...
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~ 160 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYAL 160 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHH
Confidence 68999999986542 1233577999997777776 466677899999997654 3567899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+++.++.+ ..|++++++|||.++++.
T Consensus 161 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (280)
T PRK06914 161 EGFSESLRLELKPFGIDVALIEPGSYNTNI 190 (280)
T ss_pred HHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence 9998887643 469999999999999874
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-20 Score=172.14 Aligned_cols=162 Identities=20% Similarity=0.270 Sum_probs=129.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh---CC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL---GT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~---~~ 160 (405)
++++|+||||+|+||++++++|+++|++|++++|++++. +.+.. .++.++.+|++|+++++++++.+ .+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l-------~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~ 73 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM-------EDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEG 73 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 457999999999999999999999999999999987543 22222 36889999999999998888753 14
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEcccccc--CC-ChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQ--KP-LLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~--~~-~~~y~~sK~~~ 224 (405)
++|+||||||.... +++..+++|+.+ ++++++.+++.+.++||++||.+.. .+ ...|+.+|...
T Consensus 74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~ 153 (273)
T PRK06182 74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFAL 153 (273)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHH
Confidence 69999999996532 234467889988 5666677777788899999998764 22 35799999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+.+.++.+ ..|+++++++||++..++.
T Consensus 154 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 184 (273)
T PRK06182 154 EGFSDALRLEVAPFGIDVVVIEPGGIKTEWG 184 (273)
T ss_pred HHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence 9988777653 5799999999999998864
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-20 Score=171.45 Aligned_cols=167 Identities=18% Similarity=0.130 Sum_probs=132.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++|+||||+|+||++++++|+++|++|++++|+++...... +.+.. ..++.++.+|++|.+++.++++.+.
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVA---KQIVADGGTAIAVQVDVSDPDSAKAMADATVSA 80 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999865432111 11111 2356788999999999888776531
Q ss_pred -CCccEEEEcccccCC------------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccccCCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG------------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQKPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~------------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~~~~~~y~~sK~ 222 (405)
+++|+||||||.... .+.+.+++|+.++.++++++.. .+.++||++||..++.+.+.|+.+|.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~Y~~sK~ 160 (250)
T PRK07774 81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNFYGLAKV 160 (250)
T ss_pred hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCccccHHHHH
Confidence 468999999996421 1234678999999988887764 34579999999999999999999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.|.+++.++.+ ..++++++++||.+..+.
T Consensus 161 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 192 (250)
T PRK07774 161 GLNGLTQQLARELGGMNIRVNAIAPGPIDTEA 192 (250)
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecCcccCcc
Confidence 999999998775 358999999999998765
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.2e-19 Score=165.49 Aligned_cols=217 Identities=26% Similarity=0.365 Sum_probs=167.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||||++|++++++|+++|++|++++|++++.. .+. .+++++.+|+.|+..+..+++| +|.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~-------~~~--~~v~~~~~d~~~~~~l~~a~~G----~~~~ 67 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAA-------ALA--GGVEVVLGDLRDPKSLVAGAKG----VDGV 67 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHH-------hhc--CCcEEEEeccCCHhHHHHHhcc----ccEE
Confidence 57999999999999999999999999999999988752 233 6899999999999999999999 9999
Q ss_pred EEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-CChhHHHHHHHHHHHHHHHhhhcCCceEEEEe
Q 043385 166 VSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVR 244 (405)
Q Consensus 166 v~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilR 244 (405)
+++.+... ..............+..+++. .++++++++|...+.. ....|..+|..+|+.+.+ .|++++++|
T Consensus 68 ~~i~~~~~-~~~~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~l~~-----sg~~~t~lr 140 (275)
T COG0702 68 LLISGLLD-GSDAFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADAASPSALARAKAAVEAALRS-----SGIPYTTLR 140 (275)
T ss_pred EEEecccc-cccchhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCCCCccHHHHHHHHHHHHHHh-----cCCCeEEEe
Confidence 99887654 211233344444444444444 4578999999999875 668999999999999998 899999999
Q ss_pred cCCcccCch-HHH-HHHHhCCCeEEecCCeeee-----------hhhcccccccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 245 PTAFFKSLG-GQV-ELVKEGKPYVMFGDGKLCA-----------YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 245 p~~v~g~~~-~~~-~~~~~g~~~~~~g~g~~~~-----------~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
+..+|.+.. .+. .....+.++...+.+.... ..+..+...+++|.++++ +..+..++++.+.+..|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~-~~~~~~~~~~~l~~~~g 219 (275)
T COG0702 141 RAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGP-EALTLAELASGLDYTIG 219 (275)
T ss_pred cCeeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCC-ceecHHHHHHHHHHHhC
Confidence 777766544 323 3344555555556652211 333444577899999998 89999999999999999
Q ss_pred CCCCeeecChHH
Q 043385 312 KEPKFLKVPIGI 323 (405)
Q Consensus 312 ~~~~~~~~p~~~ 323 (405)
++..+.+.+...
T Consensus 220 r~~~~~~~~~~~ 231 (275)
T COG0702 220 RPVGLIPEALAA 231 (275)
T ss_pred CcceeeCCcHHH
Confidence 998886655543
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.8e-20 Score=168.00 Aligned_cols=169 Identities=18% Similarity=0.178 Sum_probs=130.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++||||||+|+||++++++|+++|++|+++.|+..+... ....... ...++.++.+|+.|++++.++++++.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAE--ELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHH--HHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 456799999999999999999999999999888877543210 0001111 12468899999999999998887541
Q ss_pred -CCccEEEEcccccCCC---------CcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSGG---------VKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~~---------~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+|||++|..... +...+++|+.+..++++++ ++.++++||++||...+. +...|+.+|.
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~ 161 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKA 161 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHH
Confidence 4589999999964322 2346788999988888776 566788999999988764 3467999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
..+.+++.++.+ ..+++++++|||.++++..
T Consensus 162 ~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~ 194 (249)
T PRK12825 162 GLVGLTKALARELAEYGITVNMVAPGDIDTDMK 194 (249)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEECCccCCcc
Confidence 999998877664 3689999999999999863
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-20 Score=171.85 Aligned_cols=167 Identities=19% Similarity=0.153 Sum_probs=130.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
++++||||||+|+||++++++|+++|++|++++|++++..... ..+. ...++.++.+|+.|++++.++++.+.
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAA---EALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999876543111 1111 12467889999999999988887542
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEcccccc---CCChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~ 223 (405)
+++|+||||++.... .+...+++|+.+ ++++++++++.+.++||++||...+ .+...|+.+|..
T Consensus 80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a 159 (258)
T PRK12429 80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHG 159 (258)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHH
Confidence 468999999986432 122356788888 6666666777788999999998765 345789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.++.+ ..+++++++|||.+++|..
T Consensus 160 ~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~ 191 (258)
T PRK12429 160 LIGLTKVVALEGATHGVTVNAICPGYVDTPLV 191 (258)
T ss_pred HHHHHHHHHHHhcccCeEEEEEecCCCcchhh
Confidence 99988877664 4689999999999999863
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-20 Score=170.77 Aligned_cols=168 Identities=18% Similarity=0.206 Sum_probs=133.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|++++..... +.+.. ..++.++.+|++|.++++++++++.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAA---ESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA 83 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 456799999999999999999999999999999999875432111 11211 1247888999999999999887642
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||+|.... .+++.+++|+.++.++++++.+ .+.++||++||.... .+...|+.+|
T Consensus 84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK 163 (255)
T PRK07523 84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATK 163 (255)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHH
Confidence 568999999997532 1234677999998888887754 357899999998765 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...|.+.+.++.+ ..|++++++|||.+.++.
T Consensus 164 ~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 196 (255)
T PRK07523 164 GAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPL 196 (255)
T ss_pred HHHHHHHHHHHHHhhHhCeEEEEEEECcccCch
Confidence 9999999988764 579999999999999885
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-20 Score=169.96 Aligned_cols=168 Identities=17% Similarity=0.133 Sum_probs=132.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++|+||||+|+||++++++|+++|++|++++|+.++.... ...+. ...++.++.+|+.|++++.++++++.
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAAT---AELVEAAGGKARARQVDVRDRAALKAAVAAGVED 80 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999986543211 11111 12358899999999999999887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc----CCChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ----KPLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~----~~~~~y~~sK 221 (405)
+++|+|||+++.... ++...+++|+.++.++++++ ++.+.++||++||...+ .+...|+.+|
T Consensus 81 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK 160 (251)
T PRK12826 81 FGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASK 160 (251)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHH
Confidence 468999999987542 12336788999988888876 45567899999998876 3456799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
..++.+++.++.+ ..+++++++|||.+++|..
T Consensus 161 ~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~ 194 (251)
T PRK12826 161 AGLVGFTRALALELAARNITVNSVHPGGVDTPMA 194 (251)
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchh
Confidence 9999999887764 4689999999999999853
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.7e-20 Score=170.63 Aligned_cols=202 Identities=18% Similarity=0.136 Sum_probs=148.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++|+||||||+||++++++|+++|++|++++|++++.. ........+.++.+|++|++++.++++.+.
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAK------ETAAELGLVVGGPLDVTDPASFAAFLDAVEADL 76 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHH------HHHHHhccceEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999875432 111222257889999999999888877652
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... .+...+++|+.++.++++ .+++.+.++||++||...+. ....|+.+|..
T Consensus 77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 156 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHA 156 (273)
T ss_pred CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHH
Confidence 579999999996432 123467899988666554 45667788999999988763 35679999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCHHH
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTPLE 301 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~~e 301 (405)
.+.+.+.++.+ ..|+++++|+||.+..+... +.. + .... ..++..|
T Consensus 157 ~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~-------~~~----~--------------------~~~~-~~~~~~~ 204 (273)
T PRK07825 157 VVGFTDAARLELRGTGVHVSVVLPSFVNTELIA-------GTG----G--------------------AKGF-KNVEPED 204 (273)
T ss_pred HHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc-------ccc----c--------------------ccCC-CCCCHHH
Confidence 98887776654 57999999999988655311 000 0 0011 3567899
Q ss_pred HHHHHHHHcCCCCCeeecChH
Q 043385 302 QGEILFRLLGKEPKFLKVPIG 322 (405)
Q Consensus 302 la~~l~~~~g~~~~~~~~p~~ 322 (405)
+++.+...+..+.....+|..
T Consensus 205 va~~~~~~l~~~~~~~~~~~~ 225 (273)
T PRK07825 205 VAAAIVGTVAKPRPEVRVPRA 225 (273)
T ss_pred HHHHHHHHHhCCCCEEeccHH
Confidence 999999888766555555543
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.7e-20 Score=169.22 Aligned_cols=169 Identities=22% Similarity=0.254 Sum_probs=125.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
++|+|+||||+|+||+++++.|+++|++|++++|++++.......+........+.++.+|++|++++.++++.+. +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5689999999999999999999999999999999876542111111011011246677999999999988887642 4
Q ss_pred CccEEEEcccccCC------------CCcchhHhHHHHHH----HHHHHHHhcCCCEEEEEccccccC-C----------
Q 043385 161 SIDVVVSCLASRSG------------GVKDSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQK-P---------- 213 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~------------~~~~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~~-~---------- 213 (405)
++|+|||||+.... .+...+++|+.+.. .+++.+++.+.++||++||..++. +
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~ 162 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSM 162 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccccc
Confidence 68999999975321 12335677887654 555566666778999999976542 1
Q ss_pred --ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 214 --LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 214 --~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...|+.+|...+.+.+.++.+ ..++++++++||.++++.
T Consensus 163 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~ 205 (256)
T PRK09186 163 TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ 205 (256)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence 236999999999999877765 578999999999988764
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=7e-20 Score=171.03 Aligned_cols=168 Identities=20% Similarity=0.169 Sum_probs=129.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++++||||+|+||++++++|+++|++|++++|+.+..... .+.+.. ..++.++.+|++|++++.++++.+.
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~---~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQA---VNHLRAEGFDVHGVMCDVRHREEVTHLADEAFR 79 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999987544211 112221 1257788999999999988887642
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... .+...+++|+.++.++++++. +.+ .++||++||..++. +...|+.+
T Consensus 80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 159 (275)
T PRK05876 80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVA 159 (275)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHH
Confidence 568999999996421 233467899999888777753 444 46899999998774 34679999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|...+.+.+.++.+ ..|+++++++||.+.++.
T Consensus 160 K~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 193 (275)
T PRK05876 160 KYGVVGLAETLAREVTADGIGVSVLCPMVVETNL 193 (275)
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccc
Confidence 99877766666553 469999999999998875
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.3e-20 Score=168.50 Aligned_cols=167 Identities=14% Similarity=0.113 Sum_probs=130.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++++||||+|+||++++++|+++|++|+++.|+.+..... ........++.++.+|++|++++.++++.+.
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~ 79 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERV---AAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW 79 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHH---HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5678999999999999999999999999999999986543211 1111112357899999999999998887542
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEcccccc---CCChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQ---KPLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~ 223 (405)
+++|+||||+|.... .+.+.+++|+.++.++.+ ++++.+.++||++||.... .+...|+.+|.+
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a 159 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGA 159 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHH
Confidence 469999999996432 122357899998765554 4566677899999998654 345789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+++.++.+ ..+++++++|||.++++.
T Consensus 160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (252)
T PRK06138 160 IASLTRAMALDHATDGIRVNAVAPGTIDTPY 190 (252)
T ss_pred HHHHHHHHHHHHHhcCeEEEEEEECCccCcc
Confidence 99999988764 358999999999999985
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=168.40 Aligned_cols=166 Identities=16% Similarity=0.138 Sum_probs=127.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++++||||+|+||++++++|+++|++|++++|++.. . ...+.+.. ...+.++.+|++|.+++.++++.+.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-H---EVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH-H---HHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999997421 1 11111211 2357788999999998888777542
Q ss_pred -CCccEEEEcccccC--C--------CCcchhHhHHHHHH----HHHHHHHhcCCCEEEEEccccccC-CChhHHHHHHH
Q 043385 160 -TSIDVVVSCLASRS--G--------GVKDSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQK-PLLEFQRAKLK 223 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~--~--------~~~~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~~-~~~~y~~sK~~ 223 (405)
+++|+||||||... . ++...+++|+.++. .+++.+++.+.++||++||...+. +..+|+.+|.+
T Consensus 82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~Y~~sK~a 161 (260)
T PRK12823 82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVPYSAAKGG 161 (260)
T ss_pred cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCCccHHHHHH
Confidence 46999999998531 1 12335678888755 555566666778999999998764 34689999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+++.++.+ ..|+++++|+||++++|.
T Consensus 162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T PRK12823 162 VNALTASLAFEYAEHGIRVNAVAPGGTEAPP 192 (260)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence 99999988764 469999999999999985
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-19 Score=202.61 Aligned_cols=233 Identities=17% Similarity=0.154 Sum_probs=161.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC----CeEEEEecCCCCcCCCCchhHhhh--------ccCCcEEEEcCCCCH----
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG----FNVIAIAREKSGIRGRNDKEETLN--------QLQGASVCFSDVTNL---- 148 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~--------~~~~v~~~~~Dl~d~---- 148 (405)
.++|+|||||||+|+++++.|++++ ++|+++.|.........+...... ...+++++.+|+.++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 5789999999999999999999887 789999997654321111111110 013689999999743
Q ss_pred --HHHHHHHHhhCCCccEEEEcccccCC--CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC------------
Q 043385 149 --ESLEKSLENLGTSIDVVVSCLASRSG--GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK------------ 212 (405)
Q Consensus 149 --~~l~~~~~~~~~~~d~Vv~~a~~~~~--~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~------------ 212 (405)
+.+.++.++ +|+|||||+.... ........|+.|+.+++++|++.++++|+|+||.++|.
T Consensus 1051 ~~~~~~~l~~~----~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443 1051 SDEKWSDLTNE----VDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred CHHHHHHHHhc----CCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhh
Confidence 556666666 9999999997642 23334568999999999999999999999999987652
Q ss_pred -------------------CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCC-Ce
Q 043385 213 -------------------PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGK-PY 265 (405)
Q Consensus 213 -------------------~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~-~~ 265 (405)
+.++|+.+|..+|.++..+.. .|++++++|||.|||+.. .++..+..+. ..
T Consensus 1127 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~--~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~ 1204 (1389)
T TIGR03443 1127 QAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK--RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQL 1204 (1389)
T ss_pred hccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh--CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHh
Confidence 124599999999999988765 699999999999999731 2222222111 11
Q ss_pred EEecCCeeee-------------hhhcccc--cccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHH
Q 043385 266 VMFGDGKLCA-------------YCVLSED--KINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMD 325 (405)
Q Consensus 266 ~~~g~g~~~~-------------~~~~~~~--~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~ 325 (405)
..++++...+ .++..+. ..+.+||++++ ..+++.++++.+.+. |.+.+.++.+.|..+
T Consensus 1205 ~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~~-g~~~~~~~~~~w~~~ 1277 (1389)
T TIGR03443 1205 GLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH-PRIRFNDFLGTLKTY-GYDVEIVDYVHWRKS 1277 (1389)
T ss_pred CCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC-CCCcHHHHHHHHHHh-CCCCCccCHHHHHHH
Confidence 1112221111 1111121 23458999986 789999999999764 777777666666543
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=171.32 Aligned_cols=170 Identities=14% Similarity=0.156 Sum_probs=131.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++|+||||||+|+||+++++.|+++|++|+++.++.+... .......+.. ..++.++.+|++|.++++++++.+.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQD-AAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHH-HHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999988877643211 0011111111 2357789999999999988877542
Q ss_pred --CCccEEEEcccccC--C--------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccCC---ChhHHHHHH
Q 043385 160 --TSIDVVVSCLASRS--G--------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQKP---LLEFQRAKL 222 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~--~--------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~~---~~~y~~sK~ 222 (405)
+++|+||||||... . ++...+++|+.++.++++++... .-++||++||..++.+ ...|+.+|.
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~ 210 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKA 210 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHH
Confidence 57999999999642 1 23457899999999999988653 2259999999988843 467999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+++.++.+ ..|+++++|+||.+.+++
T Consensus 211 a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~ 242 (300)
T PRK06128 211 AIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL 242 (300)
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence 999999988875 469999999999999885
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-19 Score=163.30 Aligned_cols=202 Identities=18% Similarity=0.243 Sum_probs=149.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+|+||||+|+||.+++++|+++|++|++++|++++.......... ....+++++++|++|++++.++++.+..++|+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~ 79 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRA-RGAVAVSTHELDILDTASHAAFLDSLPALPDI 79 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHH-hcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence 46899999999999999999999999999999987654211111111 11246889999999999999888764445799
Q ss_pred EEEcccccCC------C---CcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHHHHHHHH
Q 043385 165 VVSCLASRSG------G---VKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKLKFEAEM 228 (405)
Q Consensus 165 Vv~~a~~~~~------~---~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~~ 228 (405)
|||++|.... + +.+.+++|+.++.++++++. +.+.++||++||..... ....|+.+|...+.+.
T Consensus 80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~ 159 (243)
T PRK07102 80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFL 159 (243)
T ss_pred EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHH
Confidence 9999986432 1 12357899999888877654 35678999999986642 3457999999999999
Q ss_pred HHHhhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCHHHHHHHH
Q 043385 229 MKVAEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTPLEQGEIL 306 (405)
Q Consensus 229 ~~~~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l 306 (405)
+.++.+ ..|+++++++||.++++... +.. .... ...+..|+++.+
T Consensus 160 ~~l~~el~~~gi~v~~v~pg~v~t~~~~-------~~~-------------------------~~~~-~~~~~~~~a~~i 206 (243)
T PRK07102 160 SGLRNRLFKSGVHVLTVKPGFVRTPMTA-------GLK-------------------------LPGP-LTAQPEEVAKDI 206 (243)
T ss_pred HHHHHHhhccCcEEEEEecCcccChhhh-------ccC-------------------------CCcc-ccCCHHHHHHHH
Confidence 888654 57999999999999986321 000 0011 345788999999
Q ss_pred HHHcCCCCCeeecC
Q 043385 307 FRLLGKEPKFLKVP 320 (405)
Q Consensus 307 ~~~~g~~~~~~~~p 320 (405)
.+.+.++...+..|
T Consensus 207 ~~~~~~~~~~i~~~ 220 (243)
T PRK07102 207 FRAIEKGKDVIYTP 220 (243)
T ss_pred HHHHhCCCCEEEcC
Confidence 99888776666666
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.4e-20 Score=168.77 Aligned_cols=171 Identities=15% Similarity=0.092 Sum_probs=131.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++|+||||+|+||++++++|+++|++|++++|+++........+.......++.++.+|++|++++.++++.+.
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999876442211111110012357789999999999988887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||...+. ....|+.+|+
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 163 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKH 163 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHH
Confidence 579999999996421 23446789999977776665 345567999999987763 3467999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|++++.|+||.+-.+.
T Consensus 164 a~~~~~~~la~el~~~gIrvn~v~PG~v~t~~ 195 (260)
T PRK07063 164 GLLGLTRALGIEYAARNVRVNAIAPGYIETQL 195 (260)
T ss_pred HHHHHHHHHHHHhCccCeEEEEEeeCCccChh
Confidence 999999998775 468999999999987664
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.8e-20 Score=168.53 Aligned_cols=163 Identities=18% Similarity=0.182 Sum_probs=124.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+++||||||+|+||++++++|+++|++|++++|++.+....... ......++.++.+|++|++++.+++++ ++|+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~~---~id~ 76 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAE--AARRGLALRVEKLDLTDAIDRAQAAEW---DVDV 76 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--HHhcCCcceEEEeeCCCHHHHHHHhcC---CCCE
Confidence 46899999999999999999999999999999986532110000 001123688999999999999988874 4999
Q ss_pred EEEcccccCCC---------CcchhHhHHHHHHH----HHHHHHhcCCCEEEEEccccccC---CChhHHHHHHHHHHHH
Q 043385 165 VVSCLASRSGG---------VKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKFEAEM 228 (405)
Q Consensus 165 Vv~~a~~~~~~---------~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~~ 228 (405)
||||||..... +...+++|+.+..+ +++.+++.+.++||++||...+. ....|+.+|...|.+.
T Consensus 77 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~ 156 (257)
T PRK09291 77 LLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIA 156 (257)
T ss_pred EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHH
Confidence 99999965321 23467788887554 45556667778999999987653 3468999999999988
Q ss_pred HHHhhh--cCCceEEEEecCCcccCc
Q 043385 229 MKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 229 ~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.++.+ ..|+++++||||.+..++
T Consensus 157 ~~l~~~~~~~gi~~~~v~pg~~~t~~ 182 (257)
T PRK09291 157 EAMHAELKPFGIQVATVNPGPYLTGF 182 (257)
T ss_pred HHHHHHHHhcCcEEEEEecCcccccc
Confidence 876653 479999999999987654
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-19 Score=168.18 Aligned_cols=200 Identities=15% Similarity=0.208 Sum_probs=147.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
+++|+||||+|+||++++++|+++|++|++++|+.++.... ...+....++.++.+|++|++++.++++.+. +.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAF---AARLPKAARVSVYAADVRDADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999986543211 0111111267889999999999988887642 46
Q ss_pred ccEEEEcccccCC----------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 162 IDVVVSCLASRSG----------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 162 ~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
+|+||||+|.... .+...+++|+.++.++++ ++++.+.++||++||...+. ....|+.+|...
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~ 158 (257)
T PRK07024 79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAA 158 (257)
T ss_pred CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHH
Confidence 8999999996431 123367899999777555 56667778999999987653 345799999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCHHHH
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTPLEQ 302 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~~el 302 (405)
+.+.+.++.+ ..|+++++++||.+.++.... .. | ..+ ..++..++
T Consensus 159 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-------~~-----------------------~--~~~-~~~~~~~~ 205 (257)
T PRK07024 159 IKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH-------NP-----------------------Y--PMP-FLMDADRF 205 (257)
T ss_pred HHHHHHHHHHhhccCcEEEEEecCCCcCchhhc-------CC-----------------------C--CCC-CccCHHHH
Confidence 9999887654 579999999999998874210 00 0 001 23567888
Q ss_pred HHHHHHHcCCCCCeeecC
Q 043385 303 GEILFRLLGKEPKFLKVP 320 (405)
Q Consensus 303 a~~l~~~~g~~~~~~~~p 320 (405)
++.+.+.+.....+..+|
T Consensus 206 a~~~~~~l~~~~~~~~~~ 223 (257)
T PRK07024 206 AARAARAIARGRRFRVIP 223 (257)
T ss_pred HHHHHHHHhCCCcEEECC
Confidence 888888887666555555
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=166.75 Aligned_cols=161 Identities=19% Similarity=0.207 Sum_probs=128.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.... . ..++.++.+|+.|++++.++++.+.
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------L--PEGVEFVAADLTTAEGCAAVARAVLER 74 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------c--CCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999986431 1 1357889999999999887766532
Q ss_pred -CCccEEEEcccccC-----------CCCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC----CChhHHH
Q 043385 160 -TSIDVVVSCLASRS-----------GGVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK----PLLEFQR 219 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~-----------~~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~----~~~~y~~ 219 (405)
+++|+||||||... .++...+++|+.++.++++ .+++.+.++||++||...+. +...|+.
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~ 154 (260)
T PRK06523 75 LGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAA 154 (260)
T ss_pred cCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHH
Confidence 56899999998532 1234467899999766544 44556667999999988763 3567999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+|..++.+.+.++.+ ..|+++++|+||.+..+..
T Consensus 155 sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~ 190 (260)
T PRK06523 155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAA 190 (260)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccH
Confidence 999999999888764 4689999999999999864
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.6e-20 Score=172.85 Aligned_cols=171 Identities=15% Similarity=0.114 Sum_probs=129.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++|+||||+|+||++++++|+++|++|++++|+.++.......+........+.++.+|+.|.++++++++.+.
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 457789999999999999999999999999999999865432111111111112357889999999999998887652
Q ss_pred -CCccEEEEcccccC-------CCCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEcccccc----------------
Q 043385 160 -TSIDVVVSCLASRS-------GGVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQ---------------- 211 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~-------~~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~---------------- 211 (405)
+++|+||||||... .+++..+++|+.+ ++.+++.+++.+.++||++||.+.+
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~ 172 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRY 172 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCC
Confidence 46999999999642 2334578899999 6677777777767899999997632
Q ss_pred CCChhHHHHHHHHHHHHHHHhhh--cCCceEEE--EecCCcccCc
Q 043385 212 KPLLEFQRAKLKFEAEMMKVAEE--DSGFTYSI--VRPTAFFKSL 252 (405)
Q Consensus 212 ~~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~i--lRp~~v~g~~ 252 (405)
.+...|+.+|.+.+.+.+.++.+ ..++++++ +.||.+..+.
T Consensus 173 ~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 173 NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 23467999999999999888764 35665554 5799997764
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=166.74 Aligned_cols=166 Identities=20% Similarity=0.197 Sum_probs=126.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEE-EecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIA-IAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|+||||+|+||++++++|+++|++|++ ++|+..+..... +.+.. ..++.++.+|++|++++.++++++.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETA---EEIEALGRKALAVKANVGDVEKIKEMFAQIDEE 79 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4579999999999999999999999999876 466654322111 11111 2357889999999999998887642
Q ss_pred -CCccEEEEcccccCCC---------CcchhHhHHHHHHHHHHHHHh----cCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSGG---------VKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~~---------~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||+|..... +...+++|+.++.++++++.+ .+.++||++||...+ .+...|+.+|.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~ 159 (250)
T PRK08063 80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKA 159 (250)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHH
Confidence 4689999999864321 122567899998877776653 556799999998765 34578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
++|.+++.++.+ ..++++++++||++..+.
T Consensus 160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 160 ALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred HHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 999999988764 478999999999998764
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-19 Score=164.85 Aligned_cols=170 Identities=16% Similarity=0.198 Sum_probs=131.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCch-hHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDK-EETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~-~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++|+|+||||+|+||++++++|+++|++|++++|...+....... ...... ...+.++.+|+.|++++.++++.+.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999988754322111100 011111 2367899999999999988886432
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH-----hcCCCEEEEEcccccc---CCChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR-----NCGASHFVLLSAICVQ---KPLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~-----~~~v~~~V~~Ss~~~~---~~~~~y~~s 220 (405)
+++|+||||+|.... ++...+++|+.++.++++++. +.+.++||++||...+ .+...|+.+
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s 163 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAAS 163 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHH
Confidence 468999999997541 123467899999999999887 5567899999998776 456789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|...+.+++.++.+ ..+++++++|||.+.++.
T Consensus 164 K~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~ 197 (249)
T PRK12827 164 KAGLIGLTKTLANELAPRGITVNAVAPGAINTPM 197 (249)
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCc
Confidence 99999988887764 358999999999999875
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-19 Score=164.96 Aligned_cols=158 Identities=18% Similarity=0.134 Sum_probs=128.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|+.... ..+.++.+|++|++++.++++.+.
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~~ 69 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-------------NDVDYFKVDVSNKEQVIKGIDYVISK 69 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-------------CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999986532 257889999999999988887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+.++||++||...+. +...|+.+|.
T Consensus 70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa 149 (258)
T PRK06398 70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKH 149 (258)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHH
Confidence 569999999996421 233467899999877776653 44567999999988764 4578999999
Q ss_pred HHHHHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..++++++|+||.+..+.
T Consensus 150 al~~~~~~la~e~~~~i~vn~i~PG~v~T~~ 180 (258)
T PRK06398 150 AVLGLTRSIAVDYAPTIRCVAVCPGSIRTPL 180 (258)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecCCccchH
Confidence 999999998875 234999999999997764
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-19 Score=167.72 Aligned_cols=167 Identities=14% Similarity=0.135 Sum_probs=131.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++|+||||+|+||++++++|+++|++|++++|++.+.... ...+.. ..++.++.+|++|.+++.++++.+.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEV---AAEIDDLGRRALAVPTDITDEDQCANLVALALER 79 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---HHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999987543211 111111 2357889999999999988877542
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhc---CCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNC---GASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~---~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++..+++++... ..++||++||...+. +...|+.+|.
T Consensus 80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~ 159 (258)
T PRK07890 80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKG 159 (258)
T ss_pred cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHH
Confidence 568999999986421 22346789999999988887642 235899999987763 4568999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..+.+++.++.+ ..++++++++||.++++.
T Consensus 160 a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~ 191 (258)
T PRK07890 160 ALLAASQSLATELGPQGIRVNSVAPGYIWGDP 191 (258)
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEeCCccCcHH
Confidence 999999988764 468999999999999985
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-19 Score=165.17 Aligned_cols=197 Identities=16% Similarity=0.157 Sum_probs=148.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
++|+||||+|+||++++++|+++|++|++++|++++.. .......++.++.+|++|.++++++++++...+|.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~ 75 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLD------ELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELW 75 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHH------HHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEE
Confidence 68999999999999999999999999999999865431 111112468889999999999999998754457999
Q ss_pred EEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHHHHHHHHHHHHHHH
Q 043385 166 VSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQRAKLKFEAEMMKV 231 (405)
Q Consensus 166 v~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~~~~~ 231 (405)
|||||.... .+.+.+++|+.++.++++++... +.+++|++||..... ....|+.+|..++.+.+.+
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 155 (240)
T PRK06101 76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTL 155 (240)
T ss_pred EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHH
Confidence 999985321 12347899999999999988753 235899999876542 3467999999999998887
Q ss_pred hhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCHHHHHHHHHHH
Q 043385 232 AEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTPLEQGEILFRL 309 (405)
Q Consensus 232 ~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~ 309 (405)
+.+ ..|+++++++||.++++.... .. + ..+ ..++..|.++.+.+.
T Consensus 156 ~~e~~~~gi~v~~v~pg~i~t~~~~~-------~~-----------------------~--~~~-~~~~~~~~a~~i~~~ 202 (240)
T PRK06101 156 QLDLRPKGIEVVTVFPGFVATPLTDK-------NT-----------------------F--AMP-MIITVEQASQEIRAQ 202 (240)
T ss_pred HHHHHhcCceEEEEeCCcCCCCCcCC-------CC-----------------------C--CCC-cccCHHHHHHHHHHH
Confidence 653 579999999999999875220 00 0 012 245778888888887
Q ss_pred cCCCCCeeecCh
Q 043385 310 LGKEPKFLKVPI 321 (405)
Q Consensus 310 ~g~~~~~~~~p~ 321 (405)
+......+.+|.
T Consensus 203 i~~~~~~~~~~~ 214 (240)
T PRK06101 203 LARGKSHIYFPA 214 (240)
T ss_pred HhcCCCEEEcCh
Confidence 766555666664
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-19 Score=163.95 Aligned_cols=168 Identities=17% Similarity=0.207 Sum_probs=130.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++|+||||+|+||.+++++|+++|++|++++|++.+..... ..+.. ..++.++.+|++|++++.++++.+.
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVA---EEVEAYGVKVVIATADVSDYEEVTAAIEQLKN 80 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 355689999999999999999999999999999999875432111 11111 2367889999999999988887532
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+|||++|.... ++.+.+++|+.++.++++++. +.+.+++|++||...+. +...|+.+|
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 160 (239)
T PRK07666 81 ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASK 160 (239)
T ss_pred HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHH
Confidence 469999999986432 123467899999888877664 45678999999987663 356799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+++.++.+ ..|++++++|||.+..+.
T Consensus 161 ~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~ 193 (239)
T PRK07666 161 FGVLGLTESLMQEVRKHNIRVTALTPSTVATDM 193 (239)
T ss_pred HHHHHHHHHHHHHhhccCcEEEEEecCcccCcc
Confidence 9999998887754 469999999999998875
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-19 Score=173.50 Aligned_cols=165 Identities=17% Similarity=0.258 Sum_probs=125.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
..+++|+||||+|+||.+++++|+++|++|++++|+.++..... ..+. ....+.++.+|++|.++++++++.+.
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAA---QELGIPPDSYTIIHIDLGDLDSVRRFVDDFRAL 80 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHhhccCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999875432111 1111 11357889999999999988887542
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHH----hcC--CCEEEEEcccccc-----------
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGR----NCG--ASHFVLLSAICVQ----------- 211 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~----~~~--v~~~V~~Ss~~~~----------- 211 (405)
+++|+||||||.... +++..+++|+.|+.++++++. +.+ .+|||++||...+
T Consensus 81 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~ 160 (322)
T PRK07453 81 GKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP 160 (322)
T ss_pred CCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence 469999999996421 223467899999887776654 333 3599999996432
Q ss_pred ---------------------------CCChhHHHHHHHHHHHHHHHhhh---cCCceEEEEecCCccc
Q 043385 212 ---------------------------KPLLEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 212 ---------------------------~~~~~y~~sK~~~E~~~~~~~~~---~~gi~~~ilRp~~v~g 250 (405)
.|...|+.||...+.+.+.++.+ ..|++++++|||+|++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 229 (322)
T PRK07453 161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVAD 229 (322)
T ss_pred CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 23457999999998888887764 2589999999999975
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=164.10 Aligned_cols=169 Identities=17% Similarity=0.160 Sum_probs=131.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++||||||+|+||+++++.|+++|++|++++|++.+.... ..... ...++.++.+|+.|++++.++++++.
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEAL---AAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHH---HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999987653211 11111 12357888999999999988887641
Q ss_pred -CCccEEEEcccccCCC---------CcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSGG---------VKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~~---------~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+|||++|..... +...++.|+.+..++++++ .+.++++||++||.... .+...|+.+|.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~ 159 (246)
T PRK05653 80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKA 159 (246)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHH
Confidence 4579999999875321 2345788999988888777 45677899999998654 45568999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCchH
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGG 254 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~ 254 (405)
..|.+.+.++.+ ..+++++++|||.++++...
T Consensus 160 ~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~ 193 (246)
T PRK05653 160 GVIGFTKALALELASRGITVNAVAPGFIDTDMTE 193 (246)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence 999988887754 46899999999999998654
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=166.45 Aligned_cols=166 Identities=18% Similarity=0.160 Sum_probs=130.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
++++||||||+|+||++++++|+++|++|++++|+.+...... ..+. ...++.++.+|+.|.++++++++.+.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVA---ADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHH---HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999875432111 1111 12368899999999999988887542
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||+|.... .+...+++|+.++.++++++. +.+.++||++||.+++. ....|+.+|.+
T Consensus 79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a 158 (250)
T TIGR03206 79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGG 158 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHH
Confidence 468999999986421 123467899999888777654 56678999999998763 35789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..++++++++||.++++.
T Consensus 159 ~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 159 LVAFSKTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred HHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence 99999988774 358999999999999885
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=167.21 Aligned_cols=168 Identities=12% Similarity=0.127 Sum_probs=130.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++++||||+|+||.+++++|+++|++|++++|++++..... ..+.. ..++.++.+|+.|++++.++++.+.
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLV---AEIRAEGGEAVALAGDVRDEAYAKALVALAVE 79 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999876543211 11111 1357889999999999988887542
Q ss_pred --CCccEEEEcccccCC----------CCcchhHhHHHHHHHH----HHHHHhcCCCEEEEEcccccc----CCChhHHH
Q 043385 160 --TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNS----LVAGRNCGASHFVLLSAICVQ----KPLLEFQR 219 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~l----l~aa~~~~v~~~V~~Ss~~~~----~~~~~y~~ 219 (405)
+++|+||||||.... ++...+++|+.+...+ ++.+++.+.++||++||...+ .....|+.
T Consensus 80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~ 159 (254)
T PRK07478 80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAA 159 (254)
T ss_pred hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHH
Confidence 479999999996421 2344688999875544 555666667799999998654 34478999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|.+.+.+.+.++.+ ..|+++++|+||++-.+.
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 194 (254)
T PRK07478 160 SKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPM 194 (254)
T ss_pred HHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcc
Confidence 999999999988775 468999999999997763
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.4e-19 Score=164.59 Aligned_cols=165 Identities=13% Similarity=0.053 Sum_probs=130.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
..++++|+||||+|+||++++++|+++|++|++++|+..+.. +.... ..++.++.+|++|.+++.++++.+.
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGS------KVAKALGENAWFIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHH------HHHHHcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999998764331 11111 1357889999999999877766542
Q ss_pred --CCccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHHHHh---cCCCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVAGRN---CGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~aa~~---~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... ++...+++|+.++.++++++.. ...++||++||...+. ....|+.+
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~s 160 (255)
T PRK05717 81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAAS 160 (255)
T ss_pred HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHH
Confidence 468999999997532 1235788999999999999863 2236899999987763 34689999
Q ss_pred HHHHHHHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.|.+++.++.+ ..++++++++||++.++.
T Consensus 161 Kaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~ 193 (255)
T PRK05717 161 KGGLLALTHALAISLGPEIRVNAVSPGWIDARD 193 (255)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence 99999999998875 346999999999999874
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-19 Score=166.41 Aligned_cols=167 Identities=16% Similarity=0.152 Sum_probs=130.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++||||||+|+||+++++.|+++|++|++++|+.++.... ...+.. ..++.++.+|++|+++++++++.+.
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEA---AAHLEALGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999986543211 111111 1357789999999999987776542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc-----CCCEEEEEccccccC-------CChhH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC-----GASHFVLLSAICVQK-------PLLEF 217 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~-----~v~~~V~~Ss~~~~~-------~~~~y 217 (405)
+++|+||||||.... .+.+.+++|+.++.++++++... +.++||++||...+. +..+|
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y 166 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAY 166 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchH
Confidence 468999999986421 22346789999999999987554 567999999976642 23789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..+|+..|.+++.++.+ ..|+++++++||.+-.+.
T Consensus 167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~ 203 (259)
T PRK08213 167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKM 203 (259)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcc
Confidence 99999999999988765 468999999999997764
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-19 Score=164.97 Aligned_cols=170 Identities=21% Similarity=0.273 Sum_probs=132.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
....+|+|+||||+++||.++|.+|+++|..++.+.|...++....+.+.......++.++++|++|.+++.++++.+.
T Consensus 8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR 87 (282)
T ss_pred HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999887765443333333332259999999999999998886553
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccccCC--C-hhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQKP--L-LEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~~~--~-~~y~~sK 221 (405)
+++|++|||||.... +....+++|+.| |+.++..+++.+-+|||.+||+.++.+ . ..|.+||
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK 167 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASK 167 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHH
Confidence 789999999997642 223478999999 555666677777789999999998843 2 4799999
Q ss_pred HHHHHHHHHHhhh--cCC--ceEEEEecCCcccC
Q 043385 222 LKFEAEMMKVAEE--DSG--FTYSIVRPTAFFKS 251 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~g--i~~~ilRp~~v~g~ 251 (405)
.+.+.+...+..| ..+ +.+ ++-||+|=-.
T Consensus 168 ~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te 200 (282)
T KOG1205|consen 168 HALEGFFETLRQELIPLGTIIII-LVSPGPIETE 200 (282)
T ss_pred HHHHHHHHHHHHHhhccCceEEE-EEecCceeec
Confidence 9999999888876 233 333 6889887654
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-19 Score=167.09 Aligned_cols=169 Identities=17% Similarity=0.196 Sum_probs=131.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--C
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--T 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--~ 160 (405)
++++++|||||+|+||++++++|+++|++|++++|+.++.......+... ...++.++.+|++|+++++++++.+. +
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g 84 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE-SNVDVSYIVADLTKREDLERTVKELKNIG 84 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-cCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence 56789999999999999999999999999999999876542111111111 12367889999999999988887542 4
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccccCC---ChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQKP---LLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~~~ 224 (405)
++|++|||+|.... ++...+++|+.+ ++.+++.+++.+.++||++||.....+ ...|+.+|.+.
T Consensus 85 ~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal 164 (263)
T PRK08339 85 EPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISM 164 (263)
T ss_pred CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHH
Confidence 69999999986421 234567888877 555666666777789999999987643 35699999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.| ..|++++.|.||.+..+.
T Consensus 165 ~~l~~~la~el~~~gIrVn~v~PG~v~T~~ 194 (263)
T PRK08339 165 AGLVRTLAKELGPKGITVNGIMPGIIRTDR 194 (263)
T ss_pred HHHHHHHHHHhcccCeEEEEEEeCcCccHH
Confidence 9999998876 578999999999997764
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=166.66 Aligned_cols=166 Identities=16% Similarity=0.132 Sum_probs=127.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
+++||||||+|+||+++++.|+++|++|++++|+++...... ..+.. ..++.++.+|+.|++++..+++.+. +
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAA---KVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 368999999999999999999999999999999865432111 11111 1368889999999998888776542 4
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
++|+|||+++.... ++...++.|+.++..+++++ ++.++++||++||...+. ....|+.+|...
T Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~ 157 (255)
T TIGR01963 78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGL 157 (255)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHH
Confidence 68999999986432 12235678999977776665 567788999999987653 346799999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+++.++.+ ..+++++++|||.++++..
T Consensus 158 ~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~ 188 (255)
T TIGR01963 158 IGLTKVLALEVAAHGITVNAICPGYVRTPLV 188 (255)
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCccccHHH
Confidence 9999877653 3589999999999999863
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-19 Score=164.06 Aligned_cols=167 Identities=15% Similarity=0.148 Sum_probs=129.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++||||||+|+||++++++|+++|++|++++|++.+..... ..+....++.++.+|+.|++++.++++.+.
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVA---AEILAGGRAIAVAADVSDEADVEAAVAAALERF 79 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999999999999976542111 111112357899999999999998887531
Q ss_pred CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+|||++|.... .+.+.+++|+.++.++++.+ ++.+.++||++||...+. +...|+.+|.
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~ 159 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKG 159 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHH
Confidence 468999999986421 12346788998866665554 456778999999998864 3567999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..+.+++.++.+ ..++++++++||.+..+.
T Consensus 160 ~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~ 191 (251)
T PRK07231 160 AVITLTKALAAELGPDKIRVNAVAPVVVETGL 191 (251)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEECccCCCc
Confidence 999998887764 358999999999997765
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.6e-19 Score=162.36 Aligned_cols=219 Identities=19% Similarity=0.172 Sum_probs=149.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
+++++||||+|+||+++++.|+++|++|++++|++.+.... ...+. ..+++++.+|+.|.+++.++++.+. ++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~---~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAF---ADALG-DARFVPVACDLTDAASLAAALANAAAERGP 77 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999987543210 01111 1367889999999999988887542 35
Q ss_pred ccEEEEcccccCCC---------CcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC--CChhHHHHHHHHHH
Q 043385 162 IDVVVSCLASRSGG---------VKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK--PLLEFQRAKLKFEA 226 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~---------~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~--~~~~y~~sK~~~E~ 226 (405)
+|+|||++|..... +...+++|+.+..++++++ ++.+.++||++||..... ....|+.+|...+.
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~y~~sK~a~~~ 157 (257)
T PRK07074 78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALGHPAYSAAKAGLIH 157 (257)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCCCcccHHHHHHHHH
Confidence 89999999864321 1224568999887777766 445667999999975542 23579999999999
Q ss_pred HHHHHhhh--cCCceEEEEecCCcccCchH--------HHHHHHhCCCeEEecCCeeee---hhhcc---cccccceEec
Q 043385 227 EMMKVAEE--DSGFTYSIVRPTAFFKSLGG--------QVELVKEGKPYVMFGDGKLCA---YCVLS---EDKINQILPI 290 (405)
Q Consensus 227 ~~~~~~~~--~~gi~~~ilRp~~v~g~~~~--------~~~~~~~g~~~~~~g~g~~~~---~~~~~---~~~~~~~y~i 290 (405)
+++.++.+ ..|+++++++||+++++... +........+...+..-+... ..+.. ....+..+++
T Consensus 158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~ 237 (257)
T PRK07074 158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPV 237 (257)
T ss_pred HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEe
Confidence 99998864 45899999999999987521 111121111111011100000 11221 1234677777
Q ss_pred cCCCCCCCHHHHHHHHHH
Q 043385 291 GGPGKALTPLEQGEILFR 308 (405)
Q Consensus 291 ~~~g~~~t~~ela~~l~~ 308 (405)
.+ |.....+|+.+.+.+
T Consensus 238 ~~-g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 238 DG-GLTAGNREMARTLTL 254 (257)
T ss_pred CC-CcCcCChhhhhhhcc
Confidence 65 577888898887754
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-18 Score=165.31 Aligned_cols=169 Identities=15% Similarity=0.164 Sum_probs=129.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++|+||||+|+||++++++|+++|++|++++|++++......... ....++.++.+|++|+++++++++.+.
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~--~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~ 82 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIR--AAGGEALAVVADVADAEAVQAAADRAEEE 82 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--HcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999998765421111111 112367889999999999998877542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHH----HHHHHHHHhcCCCEEEEEccccccCC---ChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEAN----RNSLVAGRNCGASHFVLLSAICVQKP---LLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~----~~ll~aa~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~ 222 (405)
+++|++|||||.... .++..+++|+.+. +.+++.+++.+.++||++||...+.+ ...|+.+|.
T Consensus 83 ~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~ 162 (334)
T PRK07109 83 LGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKH 162 (334)
T ss_pred CCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHH
Confidence 579999999996421 2234677887764 45666666666789999999988743 467999999
Q ss_pred HHHHHHHHHhhh----cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE----DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~ 252 (405)
..+.+.+.++.| ..++++++|+||.+..|.
T Consensus 163 a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~ 196 (334)
T PRK07109 163 AIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ 196 (334)
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch
Confidence 999988877654 257999999999998775
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-19 Score=164.64 Aligned_cols=167 Identities=19% Similarity=0.115 Sum_probs=131.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|++++. .....+. ...++.++.+|++|++++.++++++.
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD----EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH----HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46778999999999999999999999999999999987643 1111111 12468899999999999988887542
Q ss_pred --CCccEEEEcccccCC--------CCcchhHhHHHHHHHHHHHHHh---cCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAGRN---CGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa~~---~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||+|.... ++...+++|+.+..++.+++.. .+.++||++||..... +...|+.+|..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 159 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGA 159 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHH
Confidence 468999999995421 2234678899998887776643 2346899999987653 45789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.|.+++.++.+ ..+++++.|+||.++++.
T Consensus 160 ~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 160 QLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 99999988764 468999999999999985
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-19 Score=164.85 Aligned_cols=167 Identities=16% Similarity=0.197 Sum_probs=128.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAI-AREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++|+||||+|+||++++++|+++|++|+++ .|+.++... ....+.. ...+.++.+|++|++++.++++.+.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~---~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~ 80 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADE---TIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN 80 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence 456899999999999999999999999999875 565433211 1111211 1357889999999999988887532
Q ss_pred --------CCccEEEEcccccCCC---------CcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhH
Q 043385 160 --------TSIDVVVSCLASRSGG---------VKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 160 --------~~~d~Vv~~a~~~~~~---------~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y 217 (405)
+++|+||||||..... +...+++|+.++.++++++.+. ..++||++||..++. +...|
T Consensus 81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y 160 (254)
T PRK12746 81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAY 160 (254)
T ss_pred HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcch
Confidence 2589999999864321 1335679999999999887653 346899999988764 45679
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.|.+.+.++.+ ..++++++++||.++++.
T Consensus 161 ~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 197 (254)
T PRK12746 161 GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197 (254)
T ss_pred HhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence 99999999998887764 468999999999999885
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.3e-19 Score=163.96 Aligned_cols=162 Identities=16% Similarity=0.185 Sum_probs=126.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~~ 162 (405)
|+|+||||+|+||.++++.|+++|++|++++|++++.... .... ..++.++.+|+.|.+++.++++.+. +++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 75 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQEL---KDEL--GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI 75 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHh--ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999999999999999999987543210 0111 1367889999999999988877532 469
Q ss_pred cEEEEcccccCC----------CCcchhHhHHHHHH----HHHHHHHhcCCCEEEEEccccccC---CChhHHHHHHHHH
Q 043385 163 DVVVSCLASRSG----------GVKDSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKFE 225 (405)
Q Consensus 163 d~Vv~~a~~~~~----------~~~~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E 225 (405)
|+|||++|.... .+.+.+++|+.++. ++++++++.+.++||++||..... +...|+.+|...|
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~ 155 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVR 155 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHH
Confidence 999999986321 12346788999854 455556667778999999987653 4568999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.++.+ ..++++++++||.+.++.
T Consensus 156 ~~~~~l~~~~~~~~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 156 QFSLNLRTDLHGTAVRVTDIEPGLVGGTE 184 (248)
T ss_pred HHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence 999888764 468999999999998653
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.7e-19 Score=165.11 Aligned_cols=168 Identities=17% Similarity=0.141 Sum_probs=131.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+.++++|||||+|+||++++++|+++|++|++++|+.++..... ..+.. ..++.++.+|++|++++.++++.+.
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAV---AKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEK 82 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH---HHHHhcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999865432111 11111 1356788999999999988877542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||+|.... ++...+++|+.+..++++++. +.+.++||++||.... .+...|+.+|
T Consensus 83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 162 (254)
T PRK08085 83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK 162 (254)
T ss_pred hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence 568999999996431 234478899999777776654 3456799999998654 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+++.++.+ ..|+++++|+||++..+.
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~ 195 (254)
T PRK08085 163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEM 195 (254)
T ss_pred HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcc
Confidence 9999999998775 469999999999998875
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-19 Score=166.37 Aligned_cols=165 Identities=13% Similarity=0.124 Sum_probs=127.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++|||||+|+||+++++.|+++|++|++++|+ +..... ...+.. ..++.++.+|++|++++.++++.+.
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSET---VDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ 79 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHH---HHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999998 433211 112211 2357889999999999988887653
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... .+...+++|+.+...+++ .+++.+ ++||++||...+. ....|+.+|
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK 158 (272)
T PRK08589 80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAK 158 (272)
T ss_pred cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHH
Confidence 579999999997531 123356789888655444 455555 6999999988764 346899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+++.++.+ ..|+++++|.||.+..+.
T Consensus 159 aal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~ 191 (272)
T PRK08589 159 GAVINFTKSIAIEYGRDGIRANAIAPGTIETPL 191 (272)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcccCch
Confidence 9999999998875 568999999999998764
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.8e-19 Score=161.19 Aligned_cols=161 Identities=20% Similarity=0.206 Sum_probs=129.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
.+.+++|+||||+|+||++++++|+++|+ +|++++|+.++.. . ...++.++.+|+.|.+++.++++.. +
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~-------~--~~~~~~~~~~D~~~~~~~~~~~~~~-~ 72 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT-------D--LGPRVVPLQLDVTDPASVAAAAEAA-S 72 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh-------h--cCCceEEEEecCCCHHHHHHHHHhc-C
Confidence 35668999999999999999999999998 9999999876532 1 2246889999999999999988863 4
Q ss_pred CccEEEEcccc-cCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 161 SIDVVVSCLAS-RSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 161 ~~d~Vv~~a~~-~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
++|+|||++|. ... .+.+.+++|+.++.++++++. +.+.++||++||...+. +...|+.+|..
T Consensus 73 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a 152 (238)
T PRK08264 73 DVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAA 152 (238)
T ss_pred CCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHH
Confidence 58999999997 221 223467899999888888754 45677999999987764 44679999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.|.+.+.++.+ ..+++++++|||.+.++.
T Consensus 153 ~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 153 AWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 99998887764 358999999999887653
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.6e-19 Score=162.85 Aligned_cols=168 Identities=16% Similarity=0.209 Sum_probs=128.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
+++++||||+|+||++++++|+++|++|++++|++++...............++.++.+|++|++++.++++.+. ++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999999876542111111111112367889999999999988887542 56
Q ss_pred ccEEEEcccccCCC---------CcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC----CChhHHHHHHHH
Q 043385 162 IDVVVSCLASRSGG---------VKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK----PLLEFQRAKLKF 224 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~---------~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~----~~~~y~~sK~~~ 224 (405)
+|+||||||..... +...+++|+.+..++++++ ++.+.++||++||..... +...|+.+|.+.
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 161 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV 161 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence 99999999864321 1235789999987777665 455778999999976642 346899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.+ ..++++++++||++.++.
T Consensus 162 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 191 (248)
T PRK08251 162 ASLGEGLRAELAKTPIKVSTIEPGYIRSEM 191 (248)
T ss_pred HHHHHHHHHHhcccCcEEEEEecCcCcchh
Confidence 9988887764 458999999999997764
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.7e-19 Score=167.08 Aligned_cols=170 Identities=16% Similarity=0.177 Sum_probs=130.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++++||||+|+||++++++|+++|++|+++.|+..... .....+.... ..++.++.+|++|.+++.++++.+.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 124 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEED-AQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK 124 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhh-HHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999998877543211 0001111111 2357788999999999888877642
Q ss_pred --CCccEEEEcccccC----------CCCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccCC---ChhHHHHHH
Q 043385 160 --TSIDVVVSCLASRS----------GGVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQKP---LLEFQRAKL 222 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~----------~~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~~---~~~y~~sK~ 222 (405)
+++|++|||||... .++...+++|+.++.++++++... .-++||++||..++.+ ...|+.+|.
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKa 204 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKA 204 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHH
Confidence 57899999998632 123457889999999988887642 1258999999988743 467999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+++.+.+.++.+ ..|+++++|+||++++++
T Consensus 205 al~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 205 AILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred HHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 999999988775 469999999999999885
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.2e-19 Score=163.98 Aligned_cols=168 Identities=14% Similarity=0.186 Sum_probs=129.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.+..... ...... .++.++.+|++|++++.++++.+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAAT---AARLPG-AKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHhc-CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999986543210 011111 146889999999999988877531
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcCC-CEEEEEcccccc---CCChhHHHH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCGA-SHFVLLSAICVQ---KPLLEFQRA 220 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~v-~~~V~~Ss~~~~---~~~~~y~~s 220 (405)
+++|+|||++|.... .+.+.+++|+.++.++++++ ...+. ++||++||.... .+...|+.+
T Consensus 84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~ 163 (264)
T PRK12829 84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAAS 163 (264)
T ss_pred hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHH
Confidence 469999999997521 12457889999988888876 33445 678888887654 345679999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|...|.+++.++.+ ..+++++++|||+++++..
T Consensus 164 K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~ 198 (264)
T PRK12829 164 KWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM 198 (264)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence 99999999988764 3589999999999999864
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5e-19 Score=163.42 Aligned_cols=164 Identities=18% Similarity=0.138 Sum_probs=127.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|+++||||+|+||+++++.|+++|++|+++.|+.+.. .+.+.. .++.++.+|++|++++.++++.+.
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~------~~~l~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE------AKELRE-KGVFTIKCDVGNRDQVKKSKEVVEKE 76 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH------HHHHHh-CCCeEEEecCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999887754321 122222 257899999999999998887642
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHH----HHHHHHHHhcCCCEEEEEccccccC----CChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEAN----RNSLVAGRNCGASHFVLLSAICVQK----PLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~----~~ll~aa~~~~v~~~V~~Ss~~~~~----~~~~y~~sK 221 (405)
+++|+||||||.... ++...+++|+.++ +.+++.+++.+.++||++||...+. ....|+.+|
T Consensus 77 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 156 (255)
T PRK06463 77 FGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITK 156 (255)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHH
Confidence 569999999987431 2334678999994 5556666656667999999987763 336699999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+++.++.+ ..|+++++++||++-.+.
T Consensus 157 aa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~ 189 (255)
T PRK06463 157 AGIIILTRRLAFELGKYGIRVNAVAPGWVETDM 189 (255)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCch
Confidence 9999999998875 468999999999886653
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.3e-19 Score=160.73 Aligned_cols=167 Identities=16% Similarity=0.191 Sum_probs=130.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|++.+.... ...+.. .+++++.+|+.|.+++.++++.+.
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~---~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQT---LPGVPA-DALRIGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHH---HHHHhh-cCceEEEeecCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999987543211 111222 357888999999999988887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccCC---ChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQKP---LLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~~---~~~y~~sK~ 222 (405)
+++|+|||++|.... .+.+.+++|+.++.++++++. +.++++||++||...+.+ ...|+.+|.
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~ 159 (239)
T PRK12828 80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKA 159 (239)
T ss_pred hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHH
Confidence 469999999986421 123356789999888887764 457889999999987743 467999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..+.+++.++.+ ..+++++++|||+++++.
T Consensus 160 a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~ 191 (239)
T PRK12828 160 GVARLTEALAAELLDRGITVNAVLPSIIDTPP 191 (239)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 999888877653 468999999999999984
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-19 Score=162.71 Aligned_cols=164 Identities=20% Similarity=0.252 Sum_probs=130.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++++++++||||+|+||+++++.|+++|++|++++|+.++. ..+....+..++.+|++|.+.+.++++.. ++
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-~~ 77 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAAL-------DRLAGETGCEPLRLDVGDDAAIRAALAAA-GA 77 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHhCCeEEEecCCCHHHHHHHHHHh-CC
Confidence 35678999999999999999999999999999999986543 12222225678899999999998888752 45
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cC-CCEEEEEccccccC---CChhHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CG-ASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~-v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
+|+||||+|.... ++.+.+++|+.++.++++++.+ .+ .++||++||...+. +...|+.+|..+
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~ 157 (245)
T PRK07060 78 FDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAAL 157 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHH
Confidence 8999999997432 2334567899999888887754 22 36999999987663 457899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+++.++.+ ..+++++.+|||.++++..
T Consensus 158 ~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 188 (245)
T PRK07060 158 DAITRVLCVELGPHGIRVNSVNPTVTLTPMA 188 (245)
T ss_pred HHHHHHHHHHHhhhCeEEEEEeeCCCCCchh
Confidence 9999988764 4689999999999999863
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.8e-19 Score=166.53 Aligned_cols=165 Identities=14% Similarity=0.125 Sum_probs=130.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++|+||||+|+||+++++.|+++|++|++++|+.+..... ...+ ...+.++.+|++|++++.++++.+.
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~---~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLA---ALEI--GPAAIAVSLDVTRQDSIDRIVAAAVERF 78 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH---HHHh--CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5578999999999999999999999999999999987643211 0111 1357889999999999988887642
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc----C-CCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC----G-ASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~----~-v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||+|.... ++...+++|+.++.++++++... + -++||++||.... .+...|+.+|.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 158 (257)
T PRK07067 79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKA 158 (257)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHH
Confidence 469999999986431 23346789999999999887542 2 2589999997543 45678999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..+.+.+.++.+ ..|+++++|+||.++++.
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 190 (257)
T PRK07067 159 AVISYTQSAALALIRHGINVNAIAPGVVDTPM 190 (257)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence 999999888765 579999999999999975
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.7e-19 Score=165.34 Aligned_cols=168 Identities=15% Similarity=0.139 Sum_probs=130.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++++||||+|+||++++++|+++|++|++++|+.+.... ....+....++.++++|++|++++.++++.+.
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 91 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQN---VCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK 91 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH---HHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999987643211 11112222368899999999999988887542
Q ss_pred -CCccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEcccccc---CCChhHHHH
Q 043385 160 -TSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQ---KPLLEFQRA 220 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~---~~~~~y~~s 220 (405)
+++|+||||||.... ++...+++|+.++.++++++.. .+-+++|++||.... .....|+.+
T Consensus 92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s 171 (280)
T PLN02253 92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGS 171 (280)
T ss_pred hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHH
Confidence 469999999986421 1234789999999888877653 344689999987664 234679999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.|.+.+.++.+ ..|+++++++||.+..+.
T Consensus 172 K~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 205 (280)
T PLN02253 172 KHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL 205 (280)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 99999999988875 468999999999998764
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.8e-19 Score=164.51 Aligned_cols=171 Identities=15% Similarity=0.128 Sum_probs=129.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++++||||+|+||++++++|+++|++|++++|++++...............++..+.+|++|.+++.++++.+.
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 467789999999999999999999999999999999876543211111111111257788999999999988877642
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHH----HHHHHHHhcCCCEEEEEccccccCC---ChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQKP---LLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~ 222 (405)
+++|+||||||.... .+...+++|+.+.. .+++.+++.+.++||++||.....+ ...|+.+|.
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKa 164 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARA 164 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHH
Confidence 579999999996431 23346678887744 4555556666679999999887643 467999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|++++.++||.+..+.
T Consensus 165 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 196 (265)
T PRK07062 165 GLLNLVKSLATELAPKGVRVNSILLGLVESGQ 196 (265)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence 999988887765 478999999999997764
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.6e-19 Score=167.39 Aligned_cols=166 Identities=30% Similarity=0.414 Sum_probs=120.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHH-HHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLES-LEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-l~~~~~~~~~ 160 (405)
..+.++|+|+||||.+|+.+++.|+++|+.|++++|+..+...... ......+...+..|...+.+ +......+..
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~---~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~ 152 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG---VFFVDLGLQNVEADVVTAIDILKKLVEAVPK 152 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc---ccccccccceeeeccccccchhhhhhhhccc
Confidence 3456789999999999999999999999999999999876542211 01112345556666554433 3333333111
Q ss_pred CccEEEEcccccCCC--CcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC---ChhHH------HHHHHHHHHHH
Q 043385 161 SIDVVVSCLASRSGG--VKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP---LLEFQ------RAKLKFEAEMM 229 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~--~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~---~~~y~------~sK~~~E~~~~ 229 (405)
...+++-+++..++. ....+.+++.|++|+++||+.+|++|||++|+++...+ .+.+. .+|..+|++++
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~ 232 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQ 232 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHH
Confidence 245777777765443 23456799999999999999999999999999998743 23333 67888999888
Q ss_pred HHhhhcCCceEEEEecCCcccCchHH
Q 043385 230 KVAEEDSGFTYSIVRPTAFFKSLGGQ 255 (405)
Q Consensus 230 ~~~~~~~gi~~~ilRp~~v~g~~~~~ 255 (405)
+ .|++++||||+....+.+..
T Consensus 233 ~-----Sgl~ytiIR~g~~~~~~~~~ 253 (411)
T KOG1203|consen 233 D-----SGLPYTIIRPGGLEQDTGGQ 253 (411)
T ss_pred h-----cCCCcEEEeccccccCCCCc
Confidence 7 89999999999998766544
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5e-19 Score=162.66 Aligned_cols=168 Identities=19% Similarity=0.183 Sum_probs=128.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++|+||||+|+||++++++|+++|++|++++|+..... ......+.. ..++.++.+|++|++++.++++.+.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRA--NKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhH--HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 45689999999999999999999999999999999754211 000111111 1357889999999999988877532
Q ss_pred -CCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc--------CCChhHHHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ--------KPLLEFQRAKLKFE 225 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~--------~~~~~y~~sK~~~E 225 (405)
+++|+|||||+.... .+...+++|+.++.++++++.+. ..++||++||.... ....+|+.+|.++|
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e 161 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGE 161 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHH
Confidence 358999999986421 34557789999999999999864 23589999996442 11357999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+++.++.+ ..++++++++|+.+-++.
T Consensus 162 ~~~~~l~~~~~~~~i~v~~v~pg~~~~~~ 190 (248)
T PRK07806 162 DALRALRPELAEKGIGFVVVSGDMIEGTV 190 (248)
T ss_pred HHHHHHHHHhhccCeEEEEeCCccccCch
Confidence 999988764 478999999999887764
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.7e-19 Score=163.92 Aligned_cols=167 Identities=13% Similarity=0.125 Sum_probs=129.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++||||||+|+||.+++++|+++|++|++++|+ .+.... .+.... ..++.++.+|++|.+++.++++.+.
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 87 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDET---RRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE 87 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHH---HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999997 322111 111111 2367899999999999988887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccCC---ChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQKP---LLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~~---~~~y~~sK 221 (405)
+++|++|||+|.... +++..+++|+.+..++.++ +++.+.+++|++||...+.+ ...|+.+|
T Consensus 88 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 167 (258)
T PRK06935 88 EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASK 167 (258)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHH
Confidence 468999999996431 2334678899886655544 45566679999999987643 46899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 168 ~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 200 (258)
T PRK06935 168 HGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN 200 (258)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence 9999999998875 568999999999998774
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.8e-19 Score=162.09 Aligned_cols=168 Identities=14% Similarity=0.107 Sum_probs=125.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.++|++|||||+|+||++++++|+++|++|+++++...... ......+. ...++.++.+|++|.+++.++++.+.
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 84 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEA--EALAAEIRALGRRAVALQADLADEAEVRALVARASAA 84 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH--HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999999999999988877542210 00001111 12357889999999999998887642
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc----CCCEEEEEccccccC--C-ChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC----GASHFVLLSAICVQK--P-LLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~----~v~~~V~~Ss~~~~~--~-~~~y~~sK~ 222 (405)
+++|+||||||.... .+...+++|+.++.++++++... +-+++|+++|...+. | ...|+.+|.
T Consensus 85 ~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~ 164 (258)
T PRK09134 85 LGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKA 164 (258)
T ss_pred cCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHH
Confidence 568999999986432 22446789999999888876643 345899998876653 3 358999999
Q ss_pred HHHHHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
.+|.+.+.++.+ ..++++++++||.++...
T Consensus 165 a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~ 195 (258)
T PRK09134 165 ALWTATRTLAQALAPRIRVNAIGPGPTLPSG 195 (258)
T ss_pred HHHHHHHHHHHHhcCCcEEEEeecccccCCc
Confidence 999999998764 234999999999987643
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.6e-19 Score=162.67 Aligned_cols=164 Identities=17% Similarity=0.182 Sum_probs=128.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh----CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL----GT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~----~~ 160 (405)
++++|||||+|+||++++++|+++|++|++++|++++.... ..... ..++.++.+|++|.+++.++++++ .+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 76 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAAL---AAELG-AGNAWTGALDVTDRAAWDAALADFAAATGG 76 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH---HHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999999999999999987643210 01111 236889999999999999888764 35
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~ 224 (405)
++|+||||||.... ++...+++|+.++.++++++. +.+.++||++||.... .....|+.+|...
T Consensus 77 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~ 156 (260)
T PRK08267 77 RLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAV 156 (260)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHH
Confidence 78999999997532 123467899999888877764 4556799999998654 2346799999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.+ ..++++++++||.+..+.
T Consensus 157 ~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~ 186 (260)
T PRK08267 157 RGLTEALDLEWRRHGIRVADVMPLFVDTAM 186 (260)
T ss_pred HHHHHHHHHHhcccCcEEEEEecCCcCCcc
Confidence 9999888764 468999999999987654
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-19 Score=162.66 Aligned_cols=166 Identities=17% Similarity=0.179 Sum_probs=128.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
++++++||||+|+||+.++++|+++|++|++++|++++..... ..... ..++.++.+|++|++++.++++.+.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALA---AELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF 81 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999999999999999999875432111 11111 1367889999999999888877542
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||+|.... ++...+++|+.++.++++++ ++.+.++||++||...+. +...|+.+|..
T Consensus 82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~ 161 (241)
T PRK07454 82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAA 161 (241)
T ss_pred CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHH
Confidence 469999999996432 22345778998877666554 555668999999998764 35789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|+++++||||++-.+.
T Consensus 162 ~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~ 192 (241)
T PRK07454 162 LAAFTKCLAEEERSHGIRVCTITLGAVNTPL 192 (241)
T ss_pred HHHHHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence 99998887654 469999999999987764
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.8e-19 Score=168.44 Aligned_cols=172 Identities=15% Similarity=0.136 Sum_probs=129.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.++++++++||||+++||.+++++|+++|++|+++.|+.++.......+.......++.++.+|+.|.++++++++.+.
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999876543221111111111357889999999999998887652
Q ss_pred --CCccEEEEcccccCC--------CCcchhHhHHHHHHHHHHHHHh---cCCCEEEEEcccccc---------------
Q 043385 160 --TSIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAGRN---CGASHFVLLSAICVQ--------------- 211 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa~~---~~v~~~V~~Ss~~~~--------------- 211 (405)
+++|+||||||.... +++..+++|+.+...+.+.+.. .+.+|||++||....
T Consensus 90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~ 169 (313)
T PRK05854 90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSY 169 (313)
T ss_pred hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccC
Confidence 579999999996532 2334688999996655554431 234689999998653
Q ss_pred CCChhHHHHHHHHHHHHHHHhhh----cCCceEEEEecCCcccCc
Q 043385 212 KPLLEFQRAKLKFEAEMMKVAEE----DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 212 ~~~~~y~~sK~~~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~ 252 (405)
.+...|+.+|.+.+.+.++++.+ ..|++++.+.||.+..++
T Consensus 170 ~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 170 AGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 23457999999999999888753 358999999999987653
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.1e-19 Score=163.96 Aligned_cols=166 Identities=17% Similarity=0.131 Sum_probs=128.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
+++|+||||+|+||++++++|+++|++|++++|+..... ......+. ...++.++.+|++|++++.++++.+. +
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEEL--AATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHH--HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 368999999999999999999999999999998753210 01111111 12368899999999999888877542 4
Q ss_pred CccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHHHHhc-----C-----CCEEEEEcccccc---CCChh
Q 043385 161 SIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVAGRNC-----G-----ASHFVLLSAICVQ---KPLLE 216 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~aa~~~-----~-----v~~~V~~Ss~~~~---~~~~~ 216 (405)
++|+||||+|.... .+.+.+++|+.++.++++++... + +++||++||..++ .+...
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 159 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGE 159 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcc
Confidence 69999999986421 22346789999998888876432 1 5689999998775 34578
Q ss_pred HHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 217 FQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|+.+|.+.|.+++.++.+ ..|+++++++||.++++.
T Consensus 160 Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 197 (256)
T PRK12745 160 YCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDM 197 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcc
Confidence 999999999999988864 478999999999999875
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.5e-19 Score=162.21 Aligned_cols=166 Identities=15% Similarity=0.174 Sum_probs=129.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++++||||+|+||++++++|+++|++|++++|+.++.... .+.. ..++.++.+|++|.+++.++++.+.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 77 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAV---AASL--GERARFIATDITDDAAIERAVATVVAR 77 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh--CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999987543210 0111 1357889999999999988887642
Q ss_pred -CCccEEEEcccccCC--------CCcchhHhHHHHHHHHHHHHHh---cCCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAGRN---CGASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa~~---~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
+++|+||||||.... .+.+.+++|+.++.++++++.. .+-++||++||..... ....|+.+|...
T Consensus 78 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~ 157 (261)
T PRK08265 78 FGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAI 157 (261)
T ss_pred hCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHH
Confidence 578999999996421 2334678899998777776543 3346899999987653 346799999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 158 ~~~~~~la~e~~~~gi~vn~v~PG~~~t~~ 187 (261)
T PRK08265 158 RQLTRSMAMDLAPDGIRVNSVSPGWTWSRV 187 (261)
T ss_pred HHHHHHHHHHhcccCEEEEEEccCCccChh
Confidence 9999988765 468999999999987764
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7e-19 Score=161.64 Aligned_cols=164 Identities=15% Similarity=0.144 Sum_probs=127.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++|+||||+|+||++++++|+++|++|++++|+.+... ..... ..++.++.+|+.|.+++..+++.+.
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLE------AARAELGESALVIRADAGDVAAQKALAQALAEA 77 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHH------HHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999764321 11111 1357788999999988877666432
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc---CCChhHHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ---KPLLEFQRAKLKF 224 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~---~~~~~y~~sK~~~ 224 (405)
+++|+||||||.... .+...+++|+.++.++++++... ..+++|++||.... .....|+.+|...
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~ 157 (249)
T PRK06500 78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAAL 157 (249)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHH
Confidence 468999999986431 22346789999999999998742 23578888775543 3457899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+++.++.+ ..|++++++|||.+++|.
T Consensus 158 ~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 158 LSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 9999887764 469999999999999875
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.2e-19 Score=162.02 Aligned_cols=165 Identities=16% Similarity=0.205 Sum_probs=127.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
+++++||||+|+||+++++.|+++|++|++++|+.+...... ..+.. ..++.++.+|++|++++.++++.+. +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAA---DKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999999865432111 11111 2367889999999999988887642 4
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccC---CChhHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
++|+||||||.... .++..+++|+.++..+++++. +.+ .++||++||...+. ....|+.+|..
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 158 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFA 158 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHH
Confidence 69999999986432 123467889998776665553 333 35899999987653 34679999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+++.++.+ ..|++++.|+||++..+.
T Consensus 159 ~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 189 (256)
T PRK08643 159 VRGLTQTAARDLASEGITVNAYAPGIVKTPM 189 (256)
T ss_pred HHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence 99998888765 578999999999998875
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-18 Score=159.50 Aligned_cols=161 Identities=16% Similarity=0.139 Sum_probs=129.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++++||||+|+||++++++|+++|++|++++|+.++. . ...++.++.+|+.|++++.++++.+.
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~---------~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 72 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET---------V-DGRPAEFHAADVRDPDQVAALVDAIVER 72 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh---------h-cCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999986431 1 12367889999999999998887642
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----c-CCCEEEEEccccccCC---ChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----C-GASHFVLLSAICVQKP---LLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~-~v~~~V~~Ss~~~~~~---~~~y~~sK 221 (405)
+++|+||||||.... .+...+++|+.++.++++++.. . +.++||++||...+.+ ...|+.+|
T Consensus 73 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK 152 (252)
T PRK07856 73 HGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK 152 (252)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence 568999999986432 1234678999999998887653 2 3468999999987643 57899999
Q ss_pred HHHHHHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
...|.+++.++.+ ...++++.++||.+..+.
T Consensus 153 ~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~ 184 (252)
T PRK07856 153 AGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQ 184 (252)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEEEeccccChH
Confidence 9999999998875 223999999999998764
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.7e-19 Score=162.91 Aligned_cols=167 Identities=14% Similarity=0.095 Sum_probs=125.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
+++||||||+|+||++++++|+++|++|++++|+..........+........+.++.+|++|.+++..+++.+. ++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999999865432111111111011358899999999999888877642 57
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEcccccc---CCChhHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQ---KPLLEFQRAKLKF 224 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~---~~~~~y~~sK~~~ 224 (405)
+|+||||||.... .+...+++|+.++.++++++. +.+ -++||++||.... .....|+.+|++.
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~ 161 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG 161 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence 8999999986432 223456899999776666553 445 3599999997643 2346899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
+.+++.++.+ ..|++++++|||.++++
T Consensus 162 ~~l~~~la~e~~~~gi~v~~v~pg~~~~~ 190 (259)
T PRK12384 162 VGLTQSLALDLAEYGITVHSLMLGNLLKS 190 (259)
T ss_pred HHHHHHHHHHHHHcCcEEEEEecCCcccc
Confidence 9998888764 57999999999998875
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.1e-19 Score=163.56 Aligned_cols=171 Identities=14% Similarity=0.144 Sum_probs=132.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++++||||+|+||+++++.|+++|++|++++|+.++...............++.++.+|+.|++++.++++.+.
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999875432111111111111357888999999999888877642
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||+|.... ++...+++|+.++.++++++. +.+.++||++||...+. +...|+.+|.
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~ 165 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKA 165 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHH
Confidence 579999999996321 233467899999888877663 45567999999988764 4567999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..+.+++.++.+ ..+++++.++||++..+.
T Consensus 166 a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~ 197 (257)
T PRK09242 166 ALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPL 197 (257)
T ss_pred HHHHHHHHHHHHHHHhCeEEEEEEECCCCCcc
Confidence 999999988764 468999999999998875
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.4e-19 Score=164.10 Aligned_cols=167 Identities=20% Similarity=0.195 Sum_probs=128.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL--- 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~--- 158 (405)
+.+++|+||||+|+||++++++|+++|++|++++|+.+..... ...... ..++.++.+|++|.+++.++++.+
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEEL---VDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 4457999999999999999999999999999999876543211 111111 135778899999999999888754
Q ss_pred CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 159 GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
.+++|+||||||.... .+...+++|+.++.++++++. +.+.++||++||...+. +...|+.+|.
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 164 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKA 164 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHH
Confidence 2468999999986432 122346899999888887764 34567899999988774 3467999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.|.+++.++.+ ..|++++++|||.+..+.
T Consensus 165 a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~ 196 (274)
T PRK07775 165 GLEAMVTNLQMELEGTGVRASIVHPGPTLTGM 196 (274)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeCCcccCcc
Confidence 999999988764 358999999999886653
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.7e-19 Score=159.85 Aligned_cols=167 Identities=14% Similarity=0.181 Sum_probs=129.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++|+||||+|+||++++++|+++|++|++++|++.+.... .+.+....++.++.+|+.|.+++.++++++.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEA---AAELNNKGNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHH---HHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4568999999999999999999999999999999987543211 1112211468899999999999988887542
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh---cCCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN---CGASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~---~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
+++|+|||++|.... .+.+.+++|+.++.++++++.+ .+.++||++||..... +...|..+|...
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~ 160 (237)
T PRK07326 81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGL 160 (237)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHH
Confidence 469999999986432 1234678899998888877654 3457899999987653 346799999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.+ ..|++++++|||.+..+.
T Consensus 161 ~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~ 190 (237)
T PRK07326 161 VGFSEAAMLDLRQYGIKVSTIMPGSVATHF 190 (237)
T ss_pred HHHHHHHHHHhcccCcEEEEEeeccccCcc
Confidence 9888887653 469999999999998764
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.6e-19 Score=163.97 Aligned_cols=169 Identities=15% Similarity=0.194 Sum_probs=130.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++++++||||+|+||++++++|+++|++|++++|+.+..... .+.+.. ..++.++.+|+.|++++..+++.+.
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAV---VAEIKAAGGEALAVKADVLDKESLEQARQQILE 83 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999986543211 111211 1357889999999999888877542
Q ss_pred --CCccEEEEcccccCC------------------------CCcchhHhHHHHHHHH----HHHHHhcCCCEEEEEcccc
Q 043385 160 --TSIDVVVSCLASRSG------------------------GVKDSWKIDYEANRNS----LVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~------------------------~~~~~~~~n~~g~~~l----l~aa~~~~v~~~V~~Ss~~ 209 (405)
+++|+||||||.... ++...+++|+.+...+ ++.+++.+.++||++||..
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 163 (278)
T PRK08277 84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMN 163 (278)
T ss_pred HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccch
Confidence 579999999995321 1234667899886644 4455556667999999998
Q ss_pred ccCC---ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 210 VQKP---LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 210 ~~~~---~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+ ...|+.+|.+.+.+++.++.+ ..|+++++|+||.+..+..
T Consensus 164 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~ 212 (278)
T PRK08277 164 AFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQN 212 (278)
T ss_pred hcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcch
Confidence 8753 467999999999999988775 4689999999999998853
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=158.29 Aligned_cols=156 Identities=19% Similarity=0.227 Sum_probs=124.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--CC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--TS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--~~ 161 (405)
.+++|+||||+|+||++++++|+++|++|++++|+..+. . ..+++.+|++|.+++.++++.+. .+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------------~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 68 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------------F-PGELFACDLADIEQTAATLAQINEIHP 68 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------------c-CceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence 357899999999999999999999999999999987531 0 23578999999999888777432 25
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHH----HHHHhcCCCEEEEEcccccc--CCChhHHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSL----VAGRNCGASHFVLLSAICVQ--KPLLEFQRAKLKFEA 226 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll----~aa~~~~v~~~V~~Ss~~~~--~~~~~y~~sK~~~E~ 226 (405)
+|+||||+|.... ++...+++|+.+..++. +++++.+.++||++||...+ .....|+.+|...|.
T Consensus 69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~Y~~sK~a~~~ 148 (234)
T PRK07577 69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALDRTSYSAAKSALVG 148 (234)
T ss_pred CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCCchHHHHHHHHHHH
Confidence 8999999997532 12236778888866554 44556677899999998765 345789999999999
Q ss_pred HHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 227 EMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 227 ~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+++.++.+ ..|++++++|||.+..+.
T Consensus 149 ~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 176 (234)
T PRK07577 149 CTRTWALELAEYGITVNAVAPGPIETEL 176 (234)
T ss_pred HHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence 99887764 469999999999998774
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=160.78 Aligned_cols=204 Identities=16% Similarity=0.199 Sum_probs=147.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCC-cCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSG-IRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|+||||+|+||++++++|+++| ++|++++|++++ .....+.+... ...+++++.+|+.|++++.++++.+.
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA-GASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc-CCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 45789999999999999999999995 999999998764 32111111111 11268899999999998776665432
Q ss_pred CCccEEEEcccccCCC---Cc------chhHhHHHHHH----HHHHHHHhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSGG---VK------DSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~---~~------~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|++|||+|..... +. +.+++|+.+.. .+++++++.+.++||++||..... +...|+.+|+.
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa 165 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAG 165 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHH
Confidence 4699999999875321 11 24788998755 477788888888999999987653 34579999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCHHH
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTPLE 301 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~~e 301 (405)
...+.+.++.+ ..++++++++||++..+... ... + .+ ..++..|
T Consensus 166 ~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~------~~~-----------------~----------~~-~~~~~~~ 211 (253)
T PRK07904 166 LDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA------HAK-----------------E----------AP-LTVDKED 211 (253)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeeCceecchhc------cCC-----------------C----------CC-CCCCHHH
Confidence 98877776544 57999999999999886421 000 0 01 2457889
Q ss_pred HHHHHHHHcCCCCCeeecChH
Q 043385 302 QGEILFRLLGKEPKFLKVPIG 322 (405)
Q Consensus 302 la~~l~~~~g~~~~~~~~p~~ 322 (405)
+++.+.+.+..+...+..|.+
T Consensus 212 ~A~~i~~~~~~~~~~~~~~~~ 232 (253)
T PRK07904 212 VAKLAVTAVAKGKELVWAPPA 232 (253)
T ss_pred HHHHHHHHHHcCCCEEEEChh
Confidence 999999988766566666654
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=161.12 Aligned_cols=169 Identities=14% Similarity=0.106 Sum_probs=130.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++++++||||+|+||++++++|+++|++|++++|+.+... ....+.+.. ..++..+.+|+.|++++.++++.+.
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGL--AETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHH--HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999764310 111112221 2357889999999999988887652
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC--C---ChhHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK--P---LLEFQR 219 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~--~---~~~y~~ 219 (405)
+++|+||||||.... ++.+.+++|+.++..++++ +++.+.++||++||...+. + ...|+.
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~ 162 (254)
T PRK06114 83 ELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNA 162 (254)
T ss_pred HcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHH
Confidence 578999999997532 2344678999997665554 4455667999999987652 2 468999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|++.+.+.+.++.+ ..|+++++++||++..+.
T Consensus 163 sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~ 197 (254)
T PRK06114 163 SKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM 197 (254)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcc
Confidence 999999999988775 579999999999998875
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.4e-19 Score=161.97 Aligned_cols=168 Identities=17% Similarity=0.117 Sum_probs=130.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++|+||||+|+||+++++.|+++|++|++++|++++..... ..+.. ..++.++.+|++|++++.++++.+.
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELA---AALEAAGGRAHAIAADLADPASVQRFFDAAAA 80 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999998876442111 11111 2368899999999999988887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccccCC---ChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQKP---LLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~~~---~~~y~~sK 221 (405)
+++|+||||+|.... .+...+++|+.++.++++++.. .+.++||++||...+.+ ...|+.+|
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK 160 (250)
T PRK12939 81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASK 160 (250)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHH
Confidence 469999999997432 2234567899998888887653 34569999999877643 45799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...|.+++.++.+ ..++++++++||.+..+.
T Consensus 161 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 193 (250)
T PRK12939 161 GAVIGMTRSLARELGGRGITVNAIAPGLTATEA 193 (250)
T ss_pred HHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcc
Confidence 9999999887754 468999999999998775
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=159.97 Aligned_cols=165 Identities=12% Similarity=0.166 Sum_probs=129.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++|+||||+|+||++++++|+++|++|++++|+.... ....... ..++.++.+|++|++++..+++.+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSE-----TQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHH-----HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999865210 0111111 1357899999999999988777542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccCC---ChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQKP---LLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~~---~~~y~~sK 221 (405)
+++|+||||||.... .+.+.+++|+.+..++++++. +.+ .+++|++||...+.+ ...|+.+|
T Consensus 78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 157 (248)
T TIGR01832 78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASK 157 (248)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHH
Confidence 579999999997532 233467899999888887764 333 469999999877643 46799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++++||.+..+.
T Consensus 158 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 190 (248)
T TIGR01832 158 HGVAGLTKLLANEWAAKGINVNAIAPGYMATNN 190 (248)
T ss_pred HHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence 9999999998875 468999999999998875
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-18 Score=158.43 Aligned_cols=161 Identities=15% Similarity=0.137 Sum_probs=130.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+.++++|||||+|+||++++++|+++|++|++++|+.. .. ...++.++++|++|++++.++++++.
T Consensus 5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~---------~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 73 (252)
T PRK08220 5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL---------TQ--EDYPFATFVLDVSDAAAVAQVCQRLLAE 73 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh---------hh--cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999761 11 12367889999999999999887642
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||+|.... ++...+++|+.+..++++++. +.+.++||++||..... +...|+.+|.
T Consensus 74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~ 153 (252)
T PRK08220 74 TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKA 153 (252)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHH
Confidence 568999999997532 223467899999888887764 34567899999987764 3577999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
..|.+++.++.+ ..++++++++||.++++..
T Consensus 154 a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~ 186 (252)
T PRK08220 154 ALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQ 186 (252)
T ss_pred HHHHHHHHHHHHhhHhCeEEEEEecCcCcchhh
Confidence 999999888775 4789999999999999853
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=162.01 Aligned_cols=167 Identities=16% Similarity=0.194 Sum_probs=130.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++||||||+|+||.+++++|+++|++|++++|++++..... ..+. ...++.++.+|++|++++.++++.+.
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~---~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVA---EQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA 84 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999865432111 1111 12367889999999999988877542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh-----cCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN-----CGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~-----~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+|||+||.... .+...+++|+.++.++++++.. .+.++||++||.... .+...|+.+|
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 164 (263)
T PRK07814 85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK 164 (263)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence 469999999985321 2334678999999999998763 456789999998765 4567899999
Q ss_pred HHHHHHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
..++.+++.++.+ ...++++.++||.+..+.
T Consensus 165 ~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~ 196 (263)
T PRK07814 165 AALAHYTRLAALDLCPRIRVNAIAPGSILTSA 196 (263)
T ss_pred HHHHHHHHHHHHHHCCCceEEEEEeCCCcCch
Confidence 9999999988775 346899999999987653
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=161.92 Aligned_cols=159 Identities=18% Similarity=0.183 Sum_probs=126.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~~ 162 (405)
|+||||||+|+||+++++.|+++|++|++++|+.++. +.+.. .++.++.+|+.|.+++.++++.+. +++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~-------~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 73 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV-------EALAA-AGFTAVQLDVNDGAALARLAEELEAEHGGL 73 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHH-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 6899999999999999999999999999999986543 22222 257889999999999988877542 469
Q ss_pred cEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh---cCCCEEEEEccccccC---CChhHHHHHHHHHHH
Q 043385 163 DVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN---CGASHFVLLSAICVQK---PLLEFQRAKLKFEAE 227 (405)
Q Consensus 163 d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~---~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~ 227 (405)
|+||||||.... ++...+++|+.++.++++++.. .+.+++|++||..... ....|+.+|...+.+
T Consensus 74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~ 153 (274)
T PRK05693 74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL 153 (274)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence 999999996431 2234678999998888777633 2446899999987652 346899999999998
Q ss_pred HHHHhhh--cCCceEEEEecCCcccCc
Q 043385 228 MMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 228 ~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.++.+ ..|+++++++||.+..++
T Consensus 154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 154 SDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred HHHHHHHhhhhCeEEEEEecCcccccc
Confidence 8877664 479999999999998764
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=160.69 Aligned_cols=168 Identities=18% Similarity=0.212 Sum_probs=131.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++|+||||+|+||++++++|+++|++|++++|+++...... ..+. ...++.++.+|++|++++.++++++.
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAV---AALRAAGGAAEALAFDIADEEAVAAAFARIDA 84 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH---HHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999865432111 1111 12358899999999999988887652
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||+|.... ++.+.+++|+.++.++++++ .+.+.++||++||..... ....|+.+|
T Consensus 85 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 164 (256)
T PRK06124 85 EHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAK 164 (256)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHH
Confidence 568999999996432 22346789999988777554 446678999999987753 346799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+++.++.+ ..+++++.|+||.+.++.
T Consensus 165 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 165 QGLTGLMRALAAEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence 9999998887764 458999999999999885
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.7e-19 Score=162.30 Aligned_cols=169 Identities=14% Similarity=0.153 Sum_probs=130.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhh--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENL-- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~-- 158 (405)
++++++|+||||+|+||+++++.|+++|++|++++|++++..... ..+. ...++.++.+|+++++++.++++.+
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~---~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELR---AEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 466799999999999999999999999999999999876532111 1111 1236788999999999998887753
Q ss_pred -CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC--------CCEEEEEccccccC---C
Q 043385 159 -GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG--------ASHFVLLSAICVQK---P 213 (405)
Q Consensus 159 -~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~--------v~~~V~~Ss~~~~~---~ 213 (405)
.+++|+||||+|.... .+...+++|+.+..++++++. +.. .+++|++||...+. +
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~ 162 (258)
T PRK06949 83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ 162 (258)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCC
Confidence 2468999999996321 233467889999888777654 222 25899999988764 3
Q ss_pred ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 214 LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
..+|+.+|...+.+++.++.+ ..++++++|+||+++++..
T Consensus 163 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 163 IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 468999999999999888764 4689999999999998864
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-18 Score=163.16 Aligned_cols=168 Identities=16% Similarity=0.248 Sum_probs=128.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL-- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-- 158 (405)
.+++++|+||||+|+||++++++|+++|++|++++|+.+...... +.+.. ...+.++.+|+.|.+++.++++.+
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~---~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 113 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVA---DRITRAGGDAMAVPCDLSDLDAVDALVADVEK 113 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999875432111 11111 235678999999999998888743
Q ss_pred -CCCccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC----CChhHH
Q 043385 159 -GTSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK----PLLEFQ 218 (405)
Q Consensus 159 -~~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~----~~~~y~ 218 (405)
.+++|+||||||.... .+...+++|+.+..+++++ +++.+.++||++||.+++. ....|+
T Consensus 114 ~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~ 193 (293)
T PRK05866 114 RIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYN 193 (293)
T ss_pred HcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHH
Confidence 2469999999986421 1123678899986666554 4566778999999986652 245799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|++.+.+.+.++.+ ..++++++++||.+-.+.
T Consensus 194 asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~ 229 (293)
T PRK05866 194 ASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPM 229 (293)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcc
Confidence 9999999998887765 469999999999876664
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=159.41 Aligned_cols=168 Identities=14% Similarity=0.091 Sum_probs=130.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++|+||||+|+||++++++|+++|++|++++|++++..... ..+.. ..++..+.+|++|.+++.++++.+.
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 80 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETV---ALIREAGGEALFVACDVTRDAEVKALVEQTIA 80 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999876432111 11111 2358889999999999988877642
Q ss_pred --CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||+|.... ++.+.+++|+.+...+++ .+.+.+.+++|++||...+. ....|+.+
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s 160 (253)
T PRK06172 81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAAS 160 (253)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHH
Confidence 568999999996421 223467799998766554 44455567999999988763 45679999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.+.+.+.++.+ ..|++++++.||.+-.+.
T Consensus 161 Kaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~ 194 (253)
T PRK06172 161 KHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM 194 (253)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 99999999988875 468999999999997664
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=161.19 Aligned_cols=168 Identities=14% Similarity=0.128 Sum_probs=130.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++.+++++||||+|+||++++++|+++|++|++++|++++.... ...+.. ..++.++++|++|.+++.++++.+.
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKG---LAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH---HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999887543211 111221 1357889999999999998887642
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||||.... .+...+++|+.+...++++ +++.+.++||++||.... .+...|+.+|
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAK 163 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHH
Confidence 569999999997532 2234677899987665554 445567899999997554 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...+.+++.++.+ ..|++++.|+||.+..+.
T Consensus 164 aal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (265)
T PRK07097 164 GGLKMLTKNIASEYGEANIQCNGIGPGYIATPQ 196 (265)
T ss_pred HHHHHHHHHHHHHhhhcCceEEEEEeccccccc
Confidence 9999999998875 468999999999998874
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=157.14 Aligned_cols=164 Identities=17% Similarity=0.246 Sum_probs=125.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+++++||||||+|+||++++++|+++|++|+++.|+.... .+.+....++.++.+|++|.+.+.+.++.. ++
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~------~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~-~~ 75 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDA------AERLAQETGATAVQTDSADRDAVIDVVRKS-GA 75 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHH------HHHHHHHhCCeEEecCCCCHHHHHHHHHHh-CC
Confidence 35678999999999999999999999999998877643211 011211125678899999999888887653 46
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc----CCChhHHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ----KPLLEFQRAKLKFEA 226 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~----~~~~~y~~sK~~~E~ 226 (405)
+|+||||||.... +++..+++|+.++.+++..+... ..+++|++||.... .+...|+.+|.+.|.
T Consensus 76 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~ 155 (237)
T PRK12742 76 LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQG 155 (237)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHH
Confidence 8999999986421 23457889999988887655443 24699999998763 345789999999999
Q ss_pred HHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 227 EMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 227 ~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+++.++.+ ..|+++++|+||.+..+.
T Consensus 156 ~~~~la~~~~~~gi~v~~v~Pg~~~t~~ 183 (237)
T PRK12742 156 MARGLARDFGPRGITINVVQPGPIDTDA 183 (237)
T ss_pred HHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence 99888764 568999999999998764
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.9e-19 Score=163.03 Aligned_cols=169 Identities=16% Similarity=0.160 Sum_probs=124.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC-CcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHh
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS-GIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~-~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
.++++++|+||||+++||++++++|+++|++|+++.|+.. ..... ...+.. ..++.++.+|++|+++++++++.
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKI---AEDLEQKYGIKAKAYPLNILEPETYKELFKK 80 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH---HHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 3567899999999999999999999999999988876432 21111 111111 23678999999999999988876
Q ss_pred hC---CCccEEEEcccccC-------C--------CCcchhHhHHHHHH----HHHHHHHhcCCCEEEEEcccccc---C
Q 043385 158 LG---TSIDVVVSCLASRS-------G--------GVKDSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQ---K 212 (405)
Q Consensus 158 ~~---~~~d~Vv~~a~~~~-------~--------~~~~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~---~ 212 (405)
+. +++|+||||||... . .+...+++|+.+.. .+++.+++.+.++||++||.... .
T Consensus 81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 160 (260)
T PRK08416 81 IDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIE 160 (260)
T ss_pred HHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCC
Confidence 52 57999999997531 0 12235667777644 44555555556799999998764 2
Q ss_pred CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 213 PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 213 ~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
....|+.+|++.+.+.+.++.+ ..|+++++|.||.+-.+.
T Consensus 161 ~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~ 202 (260)
T PRK08416 161 NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDA 202 (260)
T ss_pred CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChh
Confidence 3467999999999999998875 468999999999886653
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=166.30 Aligned_cols=168 Identities=15% Similarity=0.164 Sum_probs=129.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL-- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-- 158 (405)
.+.+++|+||||+|+||++++++|+++|++|++++|++++...... .+.. ...+.++.+|++|+++++++++.+
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~---~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 80 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAE---ECRALGAEVLVVPTDVTDADQVKALATQAAS 80 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999998765432111 1111 235778899999999998887654
Q ss_pred -CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccCC---ChhHHHHH
Q 043385 159 -GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQKP---LLEFQRAK 221 (405)
Q Consensus 159 -~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~~---~~~y~~sK 221 (405)
.+++|++|||||.... .+.+.+++|+.++.++..+ +++.+.++||++||...+.+ ...|+.+|
T Consensus 81 ~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asK 160 (330)
T PRK06139 81 FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASK 160 (330)
T ss_pred hcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHH
Confidence 2579999999996432 1234688999987776555 45556679999999887643 36799999
Q ss_pred HHHHHHHHHHhhh--c-CCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--D-SGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~-~gi~~~ilRp~~v~g~~ 252 (405)
...+.+.+.++.| . .+++++.+.||.+..|.
T Consensus 161 aal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~ 194 (330)
T PRK06139 161 FGLRGFSEALRGELADHPDIHVCDVYPAFMDTPG 194 (330)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcc
Confidence 9988888887765 2 48999999999998875
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-18 Score=156.87 Aligned_cols=168 Identities=17% Similarity=0.157 Sum_probs=126.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++|+||||||+||+++++.|+++|++|+++.|+..+.. ......+. ...++.++.+|+.|.+++.++++.+.
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGA--EALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHH--HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999888764311 00011111 12367889999999999988877542
Q ss_pred -CCccEEEEcccccCCC---------CcchhHhHHHHHHHHHHHHHh----cCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSGG---------VKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~~---------~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
.++|+|||++|..... +...+++|+.++.++++++.. .+.++||++||.... .....|+.+|.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~ 160 (248)
T PRK05557 81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKA 160 (248)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHH
Confidence 3589999999864321 223567899998888877754 456789999997654 34578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..+.+++.++.+ ..++++++++||.+..+.
T Consensus 161 a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~ 192 (248)
T PRK05557 161 GVIGFTKSLARELASRGITVNAVAPGFIETDM 192 (248)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEecCccCCcc
Confidence 999888877653 468999999999987653
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=162.25 Aligned_cols=165 Identities=15% Similarity=0.131 Sum_probs=126.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~~ 162 (405)
|+|+||||+|+||++++++|+++|++|++++|+.++.......+. ....++.++.+|+.|++++.++++.+. +++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLR--EAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 479999999999999999999999999999998765321111111 112367889999999999888876432 469
Q ss_pred cEEEEcccccCC---------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEccccccC---CChhHHHHHHHHHH
Q 043385 163 DVVVSCLASRSG---------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKFEA 226 (405)
Q Consensus 163 d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~ 226 (405)
|+||||+|.... .++..+++|+.+..+ +++.+++.+.++||++||..++. ....|+.+|+..+.
T Consensus 79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~ 158 (270)
T PRK05650 79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVA 158 (270)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence 999999997532 122356788877655 44456677778999999988764 35689999999988
Q ss_pred HHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 227 EMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 227 ~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.++.+ ..|+++++++||.+..++
T Consensus 159 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 186 (270)
T PRK05650 159 LSETLLVELADDEIGVHVVCPSFFQTNL 186 (270)
T ss_pred HHHHHHHHhcccCcEEEEEecCccccCc
Confidence 88887775 468999999999998875
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.1e-18 Score=160.25 Aligned_cols=157 Identities=17% Similarity=0.124 Sum_probs=127.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++|+||||+|+||+++++.|+++|++|++++|++.+.. ..++.++.+|++|++++.++++.+.
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEK 74 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999876432 1367889999999999998887642
Q ss_pred -CCccEEEEcccccCC------------------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccccC---C
Q 043385 160 -TSIDVVVSCLASRSG------------------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQK---P 213 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~------------------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~~---~ 213 (405)
+++|+||||||.... +++..+++|+.++..+++++.. .+.++||++||...+. .
T Consensus 75 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 154 (266)
T PRK06171 75 FGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG 154 (266)
T ss_pred cCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC
Confidence 578999999996421 1233678999998888877653 3456899999988763 3
Q ss_pred ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcc
Q 043385 214 LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFF 249 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~ 249 (405)
...|+.+|.+++.+++.++.+ ..|+++++|+||.+.
T Consensus 155 ~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 155 QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 578999999999999988775 469999999999884
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-18 Score=160.28 Aligned_cols=165 Identities=14% Similarity=0.211 Sum_probs=123.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC-CcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS-GIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~-~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
++++|||||+|+||++++++|+++|+.|+++.++.. ... .....+.. ..++.++.+|++|.+++.++++.+.
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAE---AVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHH---HHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence 468999999999999999999999999887765432 211 01111211 1357789999999999998887542
Q ss_pred CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhc------C-CCEEEEEccccccC--C--ChhHH
Q 043385 160 TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNC------G-ASHFVLLSAICVQK--P--LLEFQ 218 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~------~-v~~~V~~Ss~~~~~--~--~~~y~ 218 (405)
+++|+||||||.... ++...+++|+.++.++++++... + -++||++||..... + ...|+
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~ 158 (248)
T PRK06123 79 GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYA 158 (248)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchH
Confidence 468999999986531 12246889999988888776542 1 24799999986542 2 24699
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|...|.+++.++.+ ..+++++++|||.++++.
T Consensus 159 ~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~ 194 (248)
T PRK06123 159 ASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI 194 (248)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence 9999999999888764 468999999999999985
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.3e-18 Score=155.87 Aligned_cols=159 Identities=21% Similarity=0.272 Sum_probs=123.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+||||||+|+||+++++.|+++ ++|++++|+.++.. ......++++++.+|++|++++.++++.+ +++|+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~id~ 74 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLD------ELAAELPGATPFPVDLTDPEAIAAAVEQL-GRLDV 74 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHH------HHHHHhccceEEecCCCCHHHHHHHHHhc-CCCCE
Confidence 578999999999999999999999 99999999865421 11112246889999999999999998853 35999
Q ss_pred EEEcccccCCC---------CcchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccccC---CChhHHHHHHHHHHHH
Q 043385 165 VVSCLASRSGG---------VKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKFEAEM 228 (405)
Q Consensus 165 Vv~~a~~~~~~---------~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~~ 228 (405)
|||++|..... +...+++|+.+ ++++++++++. .+++|++||..++. +...|+.+|...|.++
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~ 153 (227)
T PRK08219 75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRALA 153 (227)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHH
Confidence 99999975321 22356788888 55566656554 46899999988763 4567999999999988
Q ss_pred HHHhhhcCC-ceEEEEecCCcccCc
Q 043385 229 MKVAEEDSG-FTYSIVRPTAFFKSL 252 (405)
Q Consensus 229 ~~~~~~~~g-i~~~ilRp~~v~g~~ 252 (405)
+.++.+..+ ++++.++||.+.++.
T Consensus 154 ~~~~~~~~~~i~~~~i~pg~~~~~~ 178 (227)
T PRK08219 154 DALREEEPGNVRVTSVHPGRTDTDM 178 (227)
T ss_pred HHHHHHhcCCceEEEEecCCccchH
Confidence 887664345 999999999887653
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-18 Score=157.77 Aligned_cols=170 Identities=16% Similarity=0.110 Sum_probs=127.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL-- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-- 158 (405)
++++++||||||+|+||++++++|+++|++|+++.|+..... ......... ..++.++.+|++|++++.++++.+
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEM--NETLKMVKENGGEGIGVLADVSTREGCETLAKATID 80 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHH--HHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence 345689999999999999999999999999988776532110 000111111 125678889999999988887753
Q ss_pred -CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHHHHHHH
Q 043385 159 -GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 159 -~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
.+++|+||||||.... .+...+++|+.+..++++++.+. ..++||++||..++. +...|+.+|..
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~ 160 (252)
T PRK06077 81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAA 160 (252)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHH
Confidence 2468999999996321 12346788999988888877653 235899999998874 45789999999
Q ss_pred HHHHHHHHhhh-cCCceEEEEecCCcccCch
Q 043385 224 FEAEMMKVAEE-DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 224 ~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~~ 253 (405)
.|.+++.++.+ ..++++.+++||.+.++..
T Consensus 161 ~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~ 191 (252)
T PRK06077 161 VINLTKYLALELAPKIRVNAIAPGFVKTKLG 191 (252)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeeCCccChHH
Confidence 99999998875 2389999999999988754
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.3e-18 Score=158.99 Aligned_cols=163 Identities=12% Similarity=0.130 Sum_probs=123.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++|+||||+|+||.+++++|+++|++|++++|+..... ...... +..++.+|++|++++.++++.+.
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~------~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGK------AAADEV-GGLFVPTDVTDEDAVNALFDTAAETY 77 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH------HHHHHc-CCcEEEeeCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999765321 111112 23678999999999998887542
Q ss_pred CCccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccc-cC---CChhHHHH
Q 043385 160 TSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICV-QK---PLLEFQRA 220 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~-~~---~~~~y~~s 220 (405)
+++|+||||||.... .++..+++|+.++.++++. +++.+.+++|++||... +. +...|+.+
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~s 157 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTAS 157 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHH
Confidence 468999999986431 1234677899987665554 44556678999998653 32 34579999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|++.+.+.+.++.+ ..|+++++++||++.++.
T Consensus 158 Kaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 191 (255)
T PRK06057 158 KGGVLAMSRELGVQFARQGIRVNALCPGPVNTPL 191 (255)
T ss_pred HHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCch
Confidence 99888887766543 368999999999998875
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.3e-18 Score=162.08 Aligned_cols=170 Identities=15% Similarity=0.179 Sum_probs=131.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..+++|+||||||+|+||.+++++|+++|++|++++|+..... ......+.. ..++.++.+|++|.+.+.++++.+.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDA--NETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHH--HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 3566789999999999999999999999999999999764311 011111211 1357789999999999988887542
Q ss_pred ---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHHHHH
Q 043385 160 ---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... .+...+++|+.++.++++++... ..++||++||..++. ....|+.+|
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK 199 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATK 199 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHH
Confidence 468999999996421 12346789999999999888653 236899999988873 346799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+++.++.+ ..|++++.|+||.++.+.
T Consensus 200 ~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~ 232 (290)
T PRK06701 200 GAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL 232 (290)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence 9999999998875 459999999999999874
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=159.27 Aligned_cols=166 Identities=18% Similarity=0.156 Sum_probs=124.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-CCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK-SGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||+|+||++++++|+++|++|+++.+.. .... ...+.+.. ...+..+.+|+.|.+++.++++++.
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRV---KWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE 78 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHH---HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 468899999999999999999999999988865432 2110 11111111 2256778999999999988877542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.+ +++.+++.+.++||++||.... .+...|+.+|.
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~ 158 (246)
T PRK12938 79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA 158 (246)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHH
Confidence 569999999997431 234467899998555 5555566777899999998764 34577999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..++++++++||++.++.
T Consensus 159 a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~ 190 (246)
T PRK12938 159 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 190 (246)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEecccCCch
Confidence 999988887764 468999999999998875
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=160.03 Aligned_cols=166 Identities=15% Similarity=0.161 Sum_probs=125.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEec-CCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR-EKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||+|+||++++++|+++|++|+++.+ +.+...... ..+.. ...+..+.+|+.|.+++...++.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV---YEIQSNGGSAFSIGANLESLHGVEALYSSLDNE 79 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHHHhcCCceEEEecccCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999988754 333221111 11111 2346778899999988776665431
Q ss_pred -------CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHH
Q 043385 160 -------TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQ 218 (405)
Q Consensus 160 -------~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~ 218 (405)
+++|+||||||.... .++..+++|+.++..+++++... ..++||++||...+. ....|+
T Consensus 80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 159 (252)
T PRK12747 80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYS 159 (252)
T ss_pred hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHH
Confidence 269999999996421 13446789999998888776543 235999999998874 346899
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|++++.+++.++.+ ..|+++++|.||++.++.
T Consensus 160 ~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~ 195 (252)
T PRK12747 160 MTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence 9999999999988765 569999999999998875
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-18 Score=159.09 Aligned_cols=168 Identities=14% Similarity=0.160 Sum_probs=129.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++|+||||+|+||.+++++|+++|++|++++|+.++..... +.+.. ...+..+.+|+.|.+++.++++.+.
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVA---DAIVAAGGKAEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999865432111 11111 1356788999999999888777542
Q ss_pred --CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc---CCChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ---KPLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~---~~~~~y~~s 220 (405)
+++|+|||+||.... .++..+++|+.+...+++++ ++.+.+++|++||.... .+...|+.+
T Consensus 82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s 161 (252)
T PRK07035 82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSIT 161 (252)
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHH
Confidence 569999999985321 12346789999977666554 55567899999998765 345689999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|...|.+++.++.+ ..|++++.+.||.+..++
T Consensus 162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~ 195 (252)
T PRK07035 162 KAAVISMTKAFAKECAPFGIRVNALLPGLTDTKF 195 (252)
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcc
Confidence 99999999988765 468999999999987664
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.1e-18 Score=158.93 Aligned_cols=166 Identities=9% Similarity=0.097 Sum_probs=128.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++++++||||+|+||++++++|+++|++|++++|+.... ....... ..++.++.+|++|++++.++++.+.
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPE-----TQAQVEALGRKFHFITADLIQQKDIDSIVSQAVE 79 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHH-----HHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999998864211 0111111 2357889999999999998887642
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcC-CCEEEEEccccccCC---ChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCG-ASHFVLLSAICVQKP---LLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~-v~~~V~~Ss~~~~~~---~~~y~~s 220 (405)
+++|++|||||.... +++..+++|+.+...+.+++ ++.+ -++||++||...+.+ ...|+.+
T Consensus 80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~as 159 (251)
T PRK12481 80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTAS 159 (251)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHH
Confidence 579999999996432 23456789999877666654 3333 369999999887643 4679999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.+.+.+.++.+ ..|++++.|+||.+-.+.
T Consensus 160 K~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~ 193 (251)
T PRK12481 160 KSAVMGLTRALATELSQYNINVNAIAPGYMATDN 193 (251)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCc
Confidence 99999999988775 579999999999987664
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=155.91 Aligned_cols=158 Identities=13% Similarity=0.119 Sum_probs=123.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+++||||+|+||+++++.|+++|++|++++|+.++.. ......++.++.+|++|++++.++++.+.+++|++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~-------~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~l 73 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLE-------VAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTI 73 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEE
Confidence 47999999999999999999999999999999865431 11111256788999999999998887543458999
Q ss_pred EEcccccC--------------CCCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccCCChhHHHHHHHHHHHHH
Q 043385 166 VSCLASRS--------------GGVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQKPLLEFQRAKLKFEAEMM 229 (405)
Q Consensus 166 v~~a~~~~--------------~~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~ 229 (405)
|||+|... .++...+++|+.+..++++++... .-++||++||.. ......|+.+|++.+.+.+
T Consensus 74 v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~-~~~~~~Y~asKaal~~~~~ 152 (223)
T PRK05884 74 VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN-PPAGSAEAAIKAALSNWTA 152 (223)
T ss_pred EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC-CCCccccHHHHHHHHHHHH
Confidence 99987421 123346789999988877776432 226899999976 3445789999999999999
Q ss_pred HHhhh--cCCceEEEEecCCcccC
Q 043385 230 KVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 230 ~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
.++.+ ..|++++.|.||.+..+
T Consensus 153 ~la~e~~~~gI~v~~v~PG~v~t~ 176 (223)
T PRK05884 153 GQAAVFGTRGITINAVACGRSVQP 176 (223)
T ss_pred HHHHHhhhcCeEEEEEecCccCch
Confidence 88775 57899999999998654
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.5e-18 Score=156.95 Aligned_cols=167 Identities=16% Similarity=0.143 Sum_probs=128.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-CCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK-SGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++++||||+|+||++++++|+++|++|+++.+.. +... .....+.. ..++.++.+|++|++++.++++.+.
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAE---NLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVN 80 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHH---HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999998765543 2211 11111211 1358889999999999998887642
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||||.... .+.+.+++|+.++.++++++.. .+.++||++||..++ .+...|+.+|
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 160 (247)
T PRK12935 81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAK 160 (247)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHH
Confidence 568999999997432 2334678999999888887753 345699999998765 3557899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..++++++++||.+.++.
T Consensus 161 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 193 (247)
T PRK12935 161 AGMLGFTKSLALELAKTNVTVNAICPGFIDTEM 193 (247)
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChh
Confidence 9999988887664 469999999999998764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-18 Score=159.21 Aligned_cols=166 Identities=17% Similarity=0.188 Sum_probs=127.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
+++|+||||+|+||++++++|+++|++|+++.++..... ......+.. ..++.++.+|++|+++++++++.+. +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGA--KETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHH--HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999998876543210 000111111 2368889999999999888877542 5
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc----C-CCEEEEEccccccC---CChhHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC----G-ASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~----~-v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
++|+||||+|.... .+...+++|+.+..++++++... + -++||++||..... +...|+.+|..
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a 159 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHA 159 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHH
Confidence 69999999996432 22346789999999888876542 2 35899999987653 45789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+++.++.+ ..+++++.|+||.++++.
T Consensus 160 ~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~ 190 (256)
T PRK12743 160 LGGLTKAMALELVEHGILVNAVAPGAIATPM 190 (256)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence 99999888764 468999999999999875
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.3e-18 Score=158.38 Aligned_cols=164 Identities=16% Similarity=0.206 Sum_probs=126.1
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecC-CCCcCCCCchhHhhhcc---CCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIARE-KSGIRGRNDKEETLNQL---QGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~~~---~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+|+||||+|+||+++++.|+++|++|++++|+ .+..... .+.+... ..+..+.+|++|++++.++++.+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAF---AAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHH---HHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 48999999999999999999999999999998 3322111 1111111 123457899999999988887642
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHH----HHHHHHHHHHhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYE----ANRNSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~----g~~~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||+|.... ++...+++|+. +++++++++++.+.++||++||...+. ....|+.+|..
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a 157 (251)
T PRK07069 78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAA 157 (251)
T ss_pred CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHH
Confidence 568999999996532 12335678887 688888999888888999999988763 45689999999
Q ss_pred HHHHHHHHhhh----cCCceEEEEecCCcccCch
Q 043385 224 FEAEMMKVAEE----DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 224 ~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.++.+ ..+++++.++||++.++..
T Consensus 158 ~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~ 191 (251)
T PRK07069 158 VASLTKSIALDCARRGLDVRCNSIHPTFIRTGIV 191 (251)
T ss_pred HHHHHHHHHHHhcccCCcEEEEEEeecccCCcch
Confidence 99999887764 2359999999999998864
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-18 Score=159.37 Aligned_cols=167 Identities=22% Similarity=0.182 Sum_probs=128.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+.+++++|+||||+|+||++++++|+++|++|++++|+++...... ..+.. ..++.++.+|++|++++.++++++.
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAV---AQLQQAGPEGLGVSADVRDYAAVEAAFAQIA 81 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHHhCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3467789999999999999999999999999999999865432111 11111 2356788999999999998887752
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc---CCCEEEEEccccccC---CChhHHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC---GASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~---~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... ++.+.+++|+.++.++++++... .-++||++||...+. ....|+.+|
T Consensus 82 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK 161 (264)
T PRK07576 82 DEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAK 161 (264)
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHH
Confidence 468999999985321 12346789999999888876532 126999999987653 346799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCccc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g 250 (405)
...|.+++.++.+ ..+++++.++||.+.+
T Consensus 162 ~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~ 192 (264)
T PRK07576 162 AGVDMLTRTLALEWGPEGIRVNSIVPGPIAG 192 (264)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence 9999999988764 4689999999998875
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.1e-18 Score=161.05 Aligned_cols=168 Identities=15% Similarity=0.145 Sum_probs=129.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++++|||||+|+||++++++|+++|++|++++|+.++..... +.+.. ..++..+.+|++|++++.++++.+.
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLA---DEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTA 82 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH---HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999865432111 11111 1357788999999999988887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccC---C--ChhHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQK---P--LLEFQ 218 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~---~--~~~y~ 218 (405)
+++|+||||||.... .++..+++|+.+...+++++. +.+ -+++|++||..... + ...|+
T Consensus 83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~ 162 (253)
T PRK05867 83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYC 162 (253)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchH
Confidence 579999999996532 233466899999877777654 333 25799999876541 2 36799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|.+.+.+++.++.+ ..|+++++++||.+-.+.
T Consensus 163 asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~ 198 (253)
T PRK05867 163 ASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTEL 198 (253)
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcc
Confidence 9999999999998875 469999999999997764
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.5e-18 Score=156.98 Aligned_cols=166 Identities=18% Similarity=0.176 Sum_probs=130.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+..+++||||||+|+||++++++|+++|++|++++|+..... ...... ...+.++.+|++|++++.++++.+.
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~----~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 86 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAE----VAAQLL-GGNAKGLVCDVSDSQSVEAAVAAVISA 86 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHhh-CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999764311 011111 1356789999999999988887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||+|.... .+.+.+++|+.+..++++++.. .+.++||++||.... .....|+.+|.
T Consensus 87 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 166 (255)
T PRK06841 87 FGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA 166 (255)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence 468999999997532 2234678999998888887653 456799999998754 34568999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|++++.|+||.+..+.
T Consensus 167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 198 (255)
T PRK06841 167 GVVGMTKVLALEWGPYGITVNAISPTVVLTEL 198 (255)
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcc
Confidence 999999988775 468999999999998775
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.3e-18 Score=158.73 Aligned_cols=164 Identities=13% Similarity=0.116 Sum_probs=127.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++|+||||+|+||++++++|+++|++|++++|++++.. ..... ..++.++.+|++|++++.++++.+.
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLA------SLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA 77 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999875432 11111 1357889999999999988877642
Q ss_pred -CCccEEEEcccccCC-------C-------CcchhHhHHHHHHHHHHHHHhc---CCCEEEEEccccccC---CChhHH
Q 043385 160 -TSIDVVVSCLASRSG-------G-------VKDSWKIDYEANRNSLVAGRNC---GASHFVLLSAICVQK---PLLEFQ 218 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~-------~-------~~~~~~~n~~g~~~ll~aa~~~---~v~~~V~~Ss~~~~~---~~~~y~ 218 (405)
+++|+||||||.... + ++..+++|+.++..+++++... .-+++|++||...+. +...|+
T Consensus 78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 157 (263)
T PRK06200 78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYT 157 (263)
T ss_pred cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhH
Confidence 579999999996421 1 2345678999977777766432 225899999988764 345799
Q ss_pred HHHHHHHHHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
.+|.+.+.+++.++.+ ..+++++.|.||++..++
T Consensus 158 ~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~ 192 (263)
T PRK06200 158 ASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDL 192 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence 9999999999998875 335999999999997764
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.4e-18 Score=158.55 Aligned_cols=163 Identities=16% Similarity=0.179 Sum_probs=127.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++++||||+|+||++++++|+++|++|++++|+.+... .+.. ...+..+.+|+.|.+++.++++.+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQ-------ELEAAHGDAVVGVEGDVRSLDDHKEAVARCVA 75 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHhhcCCceEEEEeccCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999865432 1111 1357889999999998888777542
Q ss_pred --CCccEEEEcccccCC--------------CCcchhHhHHHHHHHHHHHHHhc---CCCEEEEEccccccCC---ChhH
Q 043385 160 --TSIDVVVSCLASRSG--------------GVKDSWKIDYEANRNSLVAGRNC---GASHFVLLSAICVQKP---LLEF 217 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~--------------~~~~~~~~n~~g~~~ll~aa~~~---~v~~~V~~Ss~~~~~~---~~~y 217 (405)
+++|+||||||.... .+++.+++|+.++.++++++... .-+++|++||...+.+ ...|
T Consensus 76 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y 155 (262)
T TIGR03325 76 AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLY 155 (262)
T ss_pred HhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchh
Confidence 568999999985310 13457789999988888877542 1257999988876643 4579
Q ss_pred HHHHHHHHHHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+++.++.+ ...++++.|.||++..+.
T Consensus 156 ~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~ 191 (262)
T TIGR03325 156 TAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL 191 (262)
T ss_pred HHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence 99999999999998875 234999999999998764
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-18 Score=158.43 Aligned_cols=167 Identities=11% Similarity=0.154 Sum_probs=130.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL--- 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~--- 158 (405)
+++++|+||||+|+||++++++|+++|++|++++|+.+...... ..+.. ..++.++.+|++|.+++.++++.+
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~---~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVV---DEIQQLGGQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 56799999999999999999999999999999998765432111 11111 135778899999999998877654
Q ss_pred CCCccEEEEcccccCC--------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 159 GTSIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
.+++|+||||+|.... .+...+++|+.++.++++++. +.+.++||++||..... +...|+.+|.+
T Consensus 86 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 165 (255)
T PRK06113 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAA 165 (255)
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHH
Confidence 2568999999996432 122357899999998888875 34456999999988763 45789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+++.++.+ ..+++++++.||.+..+.
T Consensus 166 ~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~ 196 (255)
T PRK06113 166 ASHLVRNMAFDLGEKNIRVNGIAPGAILTDA 196 (255)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEecccccccc
Confidence 99999988764 468999999999997654
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.5e-18 Score=158.49 Aligned_cols=212 Identities=17% Similarity=0.244 Sum_probs=149.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
+++||||||+|+||+++++.|+++|++|++++|++.+..... +.+.. ..++.++.+|+.|.+++.++++.+. +
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLA---QELADHGGEALVVPTDVSDAEACERLIEAAVARFG 77 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 368999999999999999999999999999999865432111 11111 2367889999999999988887542 4
Q ss_pred CccEEEEcccccCCC----------CcchhHhHHHHHHHHHHHHHh---cCCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSGG----------VKDSWKIDYEANRNSLVAGRN---CGASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~----------~~~~~~~n~~g~~~ll~aa~~---~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
++|+||||+|..... +.+.+++|+.++.++++.+.. .+.+++|++||...+. +...|+.+|...
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~ 157 (263)
T PRK06181 78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHAL 157 (263)
T ss_pred CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHH
Confidence 689999999864321 123478999999999888753 2357899999987763 447899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCHHHH
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTPLEQ 302 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~~el 302 (405)
|.+.+.++.+ ..++++++++||.+..+...-.. -..+.+.. ....... ..++..|+
T Consensus 158 ~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~-~~~~~~~~--------------------~~~~~~~-~~~~~~dv 215 (263)
T PRK06181 158 HGFFDSLRIELADDGVAVTVVCPGFVATDIRKRAL-DGDGKPLG--------------------KSPMQES-KIMSAEEC 215 (263)
T ss_pred HHHHHHHHHHhhhcCceEEEEecCccccCcchhhc-cccccccc--------------------ccccccc-CCCCHHHH
Confidence 9998877653 46899999999999887532110 00011000 0000011 35788999
Q ss_pred HHHHHHHcCCCCCeeecCh
Q 043385 303 GEILFRLLGKEPKFLKVPI 321 (405)
Q Consensus 303 a~~l~~~~g~~~~~~~~p~ 321 (405)
++.+...+..+....-++.
T Consensus 216 a~~i~~~~~~~~~~~~~~~ 234 (263)
T PRK06181 216 AEAILPAIARRKRLLVMSL 234 (263)
T ss_pred HHHHHHHhhCCCCEEecCc
Confidence 9999988876555554443
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.4e-18 Score=156.64 Aligned_cols=161 Identities=12% Similarity=0.147 Sum_probs=123.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHh-h----C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLEN-L----G 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~-~----~ 159 (405)
+|+||||||+|+||++++++|+++|++|++++|+..+.. . .....++.++.+|+.|.+++++++++ + .
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~------~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 73 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL------A-AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFV 73 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh------h-hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhc
Confidence 368999999999999999999999999999999865311 0 11123688899999999998886554 1 1
Q ss_pred --CCccEEEEcccccCC----------CCcchhHhHHHHHHHH----HHHHHhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNS----LVAGRNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~l----l~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
.++|++|||+|.... .+.+.+++|+.+...+ ++.+.+.+.++||++||...+. +...|+.+
T Consensus 74 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 153 (243)
T PRK07023 74 DGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCAT 153 (243)
T ss_pred cCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHH
Confidence 358999999986432 1234667899985554 4445555567999999998764 45689999
Q ss_pred HHHHHHHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
|..+|.+++.++.+ ..++++++++||.+-.+.
T Consensus 154 K~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 186 (243)
T PRK07023 154 KAALDHHARAVALDANRALRIVSLAPGVVDTGM 186 (243)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEecCCccccHH
Confidence 99999999988764 468999999999987664
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.1e-18 Score=156.91 Aligned_cols=166 Identities=11% Similarity=0.104 Sum_probs=127.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++++||||+|+||++++++|+++|+.|++.+|+.++.... .... ..++.++.+|++|.+++.++++.+.
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~---~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEAL---AAEL--GERVKIFPANLSDRDEVKALGQKAEAD 77 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---HHHh--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999998888876543210 0111 1357889999999999988876542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.+..++++++. +.+.++||++||.... .....|+.+|.
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~ 157 (245)
T PRK12936 78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKA 157 (245)
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHH
Confidence 569999999996431 234467899999877777653 3456799999997654 33467999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+++.++.+ ..++++++++||.+..+.
T Consensus 158 a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~ 189 (245)
T PRK12936 158 GMIGFSKSLAQEIATRNVTVNCVAPGFIESAM 189 (245)
T ss_pred HHHHHHHHHHHHhhHhCeEEEEEEECcCcCch
Confidence 998888877654 468999999999887654
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.3e-18 Score=156.93 Aligned_cols=168 Identities=16% Similarity=0.145 Sum_probs=127.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchh----Hhhh-ccCCcEEEEcCCCCHHHHHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKE----ETLN-QLQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~----~~~~-~~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
.+++++++||||+|+||+++++.|+++|++|++++|+.++.......+ ..+. ...++.++.+|++|++++.++++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 82 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA 82 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 356789999999999999999999999999999999865432111111 1111 12357889999999999988887
Q ss_pred hhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccccC-----CCh
Q 043385 157 NLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQK-----PLL 215 (405)
Q Consensus 157 ~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~~-----~~~ 215 (405)
.+. +++|+||||||.... ++...+++|+.++.++++++.. .+-+++|++||..... +..
T Consensus 83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~ 162 (273)
T PRK08278 83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHT 162 (273)
T ss_pred HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcc
Confidence 542 469999999996431 1234678999999988888753 3345899999876443 347
Q ss_pred hHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcc
Q 043385 216 EFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFF 249 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~ 249 (405)
.|+.+|.++|.+++.++.+ ..+++++.|.||.++
T Consensus 163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i 198 (273)
T PRK08278 163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTI 198 (273)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCcc
Confidence 8999999999999998875 468999999999543
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.7e-18 Score=157.22 Aligned_cols=165 Identities=16% Similarity=0.186 Sum_probs=125.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
.++++|+||||+|+||+++++.|+++|++|+++.++..... ....... ..++.++.+|+.|++++.++++.+.
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~--~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAA--EALADEL--GDRAIALQADVTDREQVQAMFATATEHF 78 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHH--HHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 35689999999999999999999999999988765432110 0000111 1367889999999999988887642
Q ss_pred CC-ccEEEEcccccC-------C--------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChh
Q 043385 160 TS-IDVVVSCLASRS-------G--------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLE 216 (405)
Q Consensus 160 ~~-~d~Vv~~a~~~~-------~--------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~ 216 (405)
+. +|+||||||... . .+.+.+++|+.++.++++++. +.+.++||++||.... .+...
T Consensus 79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 158 (253)
T PRK08642 79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHD 158 (253)
T ss_pred CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccc
Confidence 33 999999998531 0 122357899999888888775 3456799999997654 35678
Q ss_pred HHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 217 FQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
|+.+|.+.|.+++.++.+ ..|++++.|+||++..+
T Consensus 159 Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~ 195 (253)
T PRK08642 159 YTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTT 195 (253)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCc
Confidence 999999999999998875 57899999999998765
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-18 Score=157.26 Aligned_cols=167 Identities=13% Similarity=0.135 Sum_probs=126.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++++||||+|+||+.+++.|+++|++|++++|+..+..... +.... ..++.++++|++|.+++.++++.+.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAV---AECGALGTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999875432111 11111 2357889999999999888777642
Q ss_pred -CCccEEEEcccccCC------------------CCcchhHhHHHHHHHHHHH----HHhc-CCCEEEEEccccccC--C
Q 043385 160 -TSIDVVVSCLASRSG------------------GVKDSWKIDYEANRNSLVA----GRNC-GASHFVLLSAICVQK--P 213 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~------------------~~~~~~~~n~~g~~~ll~a----a~~~-~v~~~V~~Ss~~~~~--~ 213 (405)
+++|+||||+|.... .+...+++|+.++.++..+ +.+. .-++||++||...+. +
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~ 159 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMG 159 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCC
Confidence 468999999985321 1123567899887766544 3333 235799999987763 4
Q ss_pred ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 214 LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...|+.+|.+.|.+++.++.+ ..+++++.++||++.++.
T Consensus 160 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~ 200 (253)
T PRK08217 160 QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM 200 (253)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence 678999999999999988764 468999999999998875
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.8e-18 Score=160.39 Aligned_cols=220 Identities=15% Similarity=0.123 Sum_probs=155.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||||+|+||.++++.|+++|++|++++|+.++.... .+.+.....+..+.+|++|.+++.++++.+.
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~---~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAAL---AAELGGDDRVLTVVADVTDLAAMQAAAEEAVER 82 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999987643211 1112111245566799999999988887642
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc---CCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC---GASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~---~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... ++++.+++|+.++.++++++... +.++||++||...+. ....|+.+|..
T Consensus 83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 162 (296)
T PRK05872 83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAG 162 (296)
T ss_pred cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHHH
Confidence 579999999997431 23456889999988888876431 236899999998774 34689999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCHHH
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTPLE 301 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~~e 301 (405)
.+.+.+.++.+ ..|++++++.||++..+...-. . .+.... ..+. . .+...-. ...+..|
T Consensus 163 l~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~------~-----~~~~~~-~~~~-----~-~~~~p~~-~~~~~~~ 223 (296)
T PRK05872 163 VEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDA------D-----ADLPAF-RELR-----A-RLPWPLR-RTTSVEK 223 (296)
T ss_pred HHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhc------c-----ccchhH-HHHH-----h-hCCCccc-CCCCHHH
Confidence 99999887754 5789999999999987642210 0 000000 0000 0 0000011 5678999
Q ss_pred HHHHHHHHcCCCCCeeecChHH
Q 043385 302 QGEILFRLLGKEPKFLKVPIGI 323 (405)
Q Consensus 302 la~~l~~~~g~~~~~~~~p~~~ 323 (405)
+++.+...+..+...+..|.+.
T Consensus 224 va~~i~~~~~~~~~~i~~~~~~ 245 (296)
T PRK05872 224 CAAAFVDGIERRARRVYAPRWV 245 (296)
T ss_pred HHHHHHHHHhcCCCEEEchHHH
Confidence 9999999988777777777663
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.3e-18 Score=154.61 Aligned_cols=160 Identities=17% Similarity=0.167 Sum_probs=127.8
Q ss_pred EEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEEEc
Q 043385 89 LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSC 168 (405)
Q Consensus 89 lVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv~~ 168 (405)
+||||+|+||++++++|+++|++|++++|+++..... ...+....+++++.+|++|++++.++++.. +++|++||+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~id~li~~ 76 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAA---ARALGGGAPVRTAALDITDEAAVDAFFAEA-GPFDHVVIT 76 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHhcCCceEEEEccCCCHHHHHHHHHhc-CCCCEEEEC
Confidence 6999999999999999999999999999986543210 111111246889999999999999999864 568999999
Q ss_pred ccccCC---------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---CChhHHHHHHHHHHHHHHHhhhcC
Q 043385 169 LASRSG---------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKFEAEMMKVAEEDS 236 (405)
Q Consensus 169 a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~~~~~~~~~~ 236 (405)
+|.... ++.+.+++|+.++.+++++....+.++||++||.+++. +...|+.+|.+.+.+++.++.+-.
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~ 156 (230)
T PRK07041 77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELA 156 (230)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 986432 23346789999999999966655678999999998874 457899999999999999887645
Q ss_pred CceEEEEecCCcccCc
Q 043385 237 GFTYSIVRPTAFFKSL 252 (405)
Q Consensus 237 gi~~~ilRp~~v~g~~ 252 (405)
+++++.++||.+-.+.
T Consensus 157 ~irv~~i~pg~~~t~~ 172 (230)
T PRK07041 157 PVRVNTVSPGLVDTPL 172 (230)
T ss_pred CceEEEEeecccccHH
Confidence 6999999999887654
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.4e-18 Score=154.82 Aligned_cols=165 Identities=20% Similarity=0.202 Sum_probs=126.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
++|+||||+|+||+++++.|+++|++|++++|+.... ......... ...++.++.+|++|.+++.++++.+. ++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDC--AKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHH--HHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5899999999999999999999999999999985311 000001111 11358899999999999988887642 56
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHH----HHHHHhcCCCEEEEEccccccC---CChhHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNS----LVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKFE 225 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~l----l~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E 225 (405)
+|+|||++|.... .+...+++|+.+..++ ++.+++.+.++||++||...+. ....|..+|.+.+
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~ 160 (245)
T PRK12824 81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMI 160 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence 9999999986432 2234678999997776 4455666778999999988763 3467999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+++.++.+ ..++++++++||++.++.
T Consensus 161 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 189 (245)
T PRK12824 161 GFTKALASEGARYGITVNCIAPGYIATPM 189 (245)
T ss_pred HHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence 998887754 468999999999998875
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2e-18 Score=158.38 Aligned_cols=164 Identities=13% Similarity=0.154 Sum_probs=122.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAI-AREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
++|+||||+|+||++++++|+++|++|+++ .|+.++... ....+.. ..++.++.+|+.|++++.++++.+. +
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQE---VVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHH---HHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 579999999999999999999999999875 454432211 1111111 1257889999999999999888752 5
Q ss_pred CccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhc-------CCCEEEEEccccccC--C--ChhHHH
Q 043385 161 SIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNC-------GASHFVLLSAICVQK--P--LLEFQR 219 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~-------~v~~~V~~Ss~~~~~--~--~~~y~~ 219 (405)
++|+|||++|.... ++...+++|+.++.++++++... ..++||++||...+. | ...|+.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~ 158 (247)
T PRK09730 79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAA 158 (247)
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHh
Confidence 78999999996421 12246789999987766654332 135799999987652 2 246999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|...|.+++.++.+ ..+++++++|||.+|+|.
T Consensus 159 sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~ 193 (247)
T PRK09730 159 SKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEM 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcc
Confidence 999999998877653 468999999999999985
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.7e-18 Score=156.17 Aligned_cols=166 Identities=15% Similarity=0.124 Sum_probs=128.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+.+++++||||+|+||++++++|+++|++|++++|+.... . ....+. ...++.++.+|++|++++.++++.+.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~-~---~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 79 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIE-K---LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK 79 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHH-H---HHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999975321 0 111111 12357789999999999988887642
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc----CCChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ----KPLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~----~~~~~y~~sK 221 (405)
+++|+||||+|.... .+++.+++|+.++.++++++. +.+.++||++||.... .....|+.+|
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK 159 (263)
T PRK08226 80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK 159 (263)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHH
Confidence 568999999996432 122357899999888887754 3455799999987653 2346799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...|.+++.++.+ ..+++++.++||.+.++.
T Consensus 160 ~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~ 192 (263)
T PRK08226 160 AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPM 192 (263)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEecCcccCHH
Confidence 9999999988865 458999999999998875
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.7e-18 Score=155.44 Aligned_cols=159 Identities=19% Similarity=0.244 Sum_probs=124.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC----CC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG----TS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~----~~ 161 (405)
++|+||||+|+||+++++.|+++|++|++++|+.++. +.... .+++.+.+|+.|.+++.++++.+. ++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~-------~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~ 74 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV-------ARMNS-LGFTGILLDLDDPESVERAADEVIALTDNR 74 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHh-------HHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 5899999999999999999999999999999987653 22222 267889999999998887776541 46
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEccccccC---CChhHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKFE 225 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E 225 (405)
+|.+||++|.... .+.+.+++|+.|+.+ +++++++.+.+++|++||..... ....|+.+|...|
T Consensus 75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~ 154 (256)
T PRK08017 75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALE 154 (256)
T ss_pred CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHH
Confidence 8999999985421 123467889988666 46777778888999999986653 3467999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.++.+ ..++++++++||.+..++
T Consensus 155 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 183 (256)
T PRK08017 155 AWSDALRMELRHSGIKVSLIEPGPIRTRF 183 (256)
T ss_pred HHHHHHHHHHhhcCCEEEEEeCCCcccch
Confidence 987765442 578999999999887654
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-17 Score=152.75 Aligned_cols=158 Identities=18% Similarity=0.230 Sum_probs=122.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
++++|||||+|+||++++++|+++|++|++++|++++.. +.+.. .++.++.+|+.|++++.++++.+. ++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI------DGLRQ-AGAQCIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH------HHHHH-cCCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 478999999999999999999999999999999865421 22222 257889999999999988887653 56
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcC--CCEEEEEccccccC---CChhHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCG--ASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~--v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+|+||||||.... +++..+++|+.+...+.+++ ++.+ .+++|++||..... ....|+.+|..
T Consensus 75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaa 154 (236)
T PRK06483 75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAA 154 (236)
T ss_pred ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHH
Confidence 9999999996421 22346788988876555544 3433 46899999987643 34679999999
Q ss_pred HHHHHHHHhhh-cCCceEEEEecCCcc
Q 043385 224 FEAEMMKVAEE-DSGFTYSIVRPTAFF 249 (405)
Q Consensus 224 ~E~~~~~~~~~-~~gi~~~ilRp~~v~ 249 (405)
.|.+++.++.+ ..++++++|+||.+.
T Consensus 155 l~~l~~~~a~e~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 155 LDNMTLSFAAKLAPEVKVNSIAPALIL 181 (236)
T ss_pred HHHHHHHHHHHHCCCcEEEEEccCcee
Confidence 99999998876 346999999999874
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.4e-18 Score=154.15 Aligned_cols=167 Identities=19% Similarity=0.151 Sum_probs=127.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAI-AREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++||||||+|+||.++++.|+++|++|+++ +|+.++..... ..+. ...++.++.+|++|++++.++++.+.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELL---EEIKEEGGDAIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 567899999999999999999999999999998 88765432111 1111 12357889999999999988877432
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+|||++|.... .++..+++|+.+..++++++. +.+.++||++||...+ .....|+.+|
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK 159 (247)
T PRK05565 80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK 159 (247)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence 359999999997532 123467889999777766654 4556789999998765 3346799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...+.+++.++.+ ..|++++++|||.+..+.
T Consensus 160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~ 192 (247)
T PRK05565 160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEM 192 (247)
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEEECCccCcc
Confidence 9988888877664 469999999999997764
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.4e-18 Score=156.27 Aligned_cols=163 Identities=18% Similarity=0.213 Sum_probs=127.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
+|+++||||+|+||+++++.|+++|++|++++|+..+..... ..+.. ..++.++.+|++|++++.++++.+. +
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAK---LEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFG 77 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 478999999999999999999999999999999865432111 11111 1367889999999999988887642 5
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cC-CCEEEEEccccccCC---ChhHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CG-ASHFVLLSAICVQKP---LLEFQRAKLK 223 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~-v~~~V~~Ss~~~~~~---~~~y~~sK~~ 223 (405)
++|+||||+|.... .+...+++|+.++.++++++.+ .+ .++||++||...+.+ ...|+.+|..
T Consensus 78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa 157 (252)
T PRK07677 78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAG 157 (252)
T ss_pred CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHH
Confidence 68999999985321 2344789999999988888743 22 368999999887643 3579999999
Q ss_pred HHHHHHHHhhh---cCCceEEEEecCCccc
Q 043385 224 FEAEMMKVAEE---DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 224 ~E~~~~~~~~~---~~gi~~~ilRp~~v~g 250 (405)
.+.+.+.++.+ ..|++++.|+||.+..
T Consensus 158 ~~~~~~~la~e~~~~~gi~v~~v~PG~v~~ 187 (252)
T PRK07677 158 VLAMTRTLAVEWGRKYGIRVNAIAPGPIER 187 (252)
T ss_pred HHHHHHHHHHHhCcccCeEEEEEeeccccc
Confidence 99999988775 3599999999999875
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=153.30 Aligned_cols=170 Identities=15% Similarity=0.105 Sum_probs=128.7
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCcC--------CCCchhHhhhc-cCCcEEEEcCCCCHHHH
Q 043385 83 PKDINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREKSGIR--------GRNDKEETLNQ-LQGASVCFSDVTNLESL 151 (405)
Q Consensus 83 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~--------~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l 151 (405)
+++++||||||+| +||.+++++|+++|++|++++|++.+.. ........+.. ..++.++.+|++|.+++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 4678999999995 7999999999999999999999732110 00000111111 23588999999999999
Q ss_pred HHHHHhhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc----CCCEEEEEccccccCC--
Q 043385 152 EKSLENLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC----GASHFVLLSAICVQKP-- 213 (405)
Q Consensus 152 ~~~~~~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~----~v~~~V~~Ss~~~~~~-- 213 (405)
..+++.+. +++|+||||||.... .++..+++|+.++.++++++... +.++||++||...+.|
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~ 162 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP 162 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC
Confidence 88887652 568999999986422 12335789999999999887542 4469999999887754
Q ss_pred -ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 214 -LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 214 -~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...|+.+|.+.|.+++.++.+ ..+++++.++||.+..++
T Consensus 163 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~ 204 (256)
T PRK12748 163 DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGW 204 (256)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCC
Confidence 467999999999999887764 468999999999887764
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.5e-18 Score=156.23 Aligned_cols=170 Identities=15% Similarity=0.123 Sum_probs=128.5
Q ss_pred CCCCeEEEEcCCC-hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTG-YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG-~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++++||||+| +||+++++.|+++|++|++++|+.++.......+.......++.++.+|++|++++.++++.+.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4568999999997 7999999999999999999998875432111111110011257889999999999988887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccC---CChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||+|.... .+.+.+++|+.+...+++++. +.+ -++||++||...+. +...|+.+|
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK 174 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAK 174 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHH
Confidence 578999999996421 233467889999877766653 333 46899999877653 456799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|+||.++.+.
T Consensus 175 aal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~ 207 (262)
T PRK07831 175 AGVMALTRCSALEAAEYGVRINAVAPSIAMHPF 207 (262)
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEeeCCccCcc
Confidence 9999999998875 478999999999998875
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.1e-18 Score=154.18 Aligned_cols=168 Identities=16% Similarity=0.173 Sum_probs=127.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.++++|+||||+|+||+++++.|+++|++|+++.|+..... ....+.+. ...++.++.+|++|++++.++++.+.
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAA--DELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHH--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999988877643211 00011111 12367889999999999998888542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
+++|+||||||.... .+...+++|+.++.++++++.+. ..++||++||...+. +...|+.+|...
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 160 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAV 160 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHH
Confidence 469999999996432 22346789999999988887653 235899999987753 457899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+++.++.+ ..++++++++||.+-.+.
T Consensus 161 ~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~ 190 (245)
T PRK12937 161 EGLVHVLANELRGRGITVNAVAPGPVATEL 190 (245)
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeCCccCch
Confidence 9999887764 468999999999887653
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=150.84 Aligned_cols=160 Identities=16% Similarity=0.189 Sum_probs=125.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~d~ 164 (405)
++|+||||+|+||++++++|+++|++|++++|++.+.. ......++.++.+|++|+++++++++.+. +++|+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~ 74 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT-------ALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDL 74 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH-------HHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCE
Confidence 68999999999999999999999999999999876532 22233467888999999999988887653 36999
Q ss_pred EEEcccccCC-----------CCcchhHhHHHHHHHHHHHHHhc---CCCEEEEEccccccC------CChhHHHHHHHH
Q 043385 165 VVSCLASRSG-----------GVKDSWKIDYEANRNSLVAGRNC---GASHFVLLSAICVQK------PLLEFQRAKLKF 224 (405)
Q Consensus 165 Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~aa~~~---~v~~~V~~Ss~~~~~------~~~~y~~sK~~~ 224 (405)
||||+|.... ++...+++|+.++..+++++... +..++|++||..... +...|+.+|.+.
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~ 154 (225)
T PRK08177 75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAAL 154 (225)
T ss_pred EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHH
Confidence 9999987421 12235678888888887776532 335899999865431 335699999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+++.++.+ ..+++++.++||++-.+.
T Consensus 155 ~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 155 NSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred HHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 9999988765 568999999999987765
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=155.22 Aligned_cols=169 Identities=12% Similarity=0.128 Sum_probs=126.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++++++||||+|+||+++++.|+++|++|+++.|+..... ......+.. ..++.++.+|++|.+++.++++.+.
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~--~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~ 81 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEA--NDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK 81 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHH--HHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998888543211 001111111 2357788999999999888877542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHH----HHHHHHHhcC-CCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANR----NSLVAGRNCG-ASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~----~ll~aa~~~~-v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... .++..+++|+.+.. .+++.+++.+ -++||++||...+. +...|+.+
T Consensus 82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 161 (261)
T PRK08936 82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAAS 161 (261)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHH
Confidence 569999999996432 12346788988754 4555566655 36999999987763 34689999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 162 Kaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 195 (261)
T PRK08936 162 KGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCc
Confidence 99998888887664 468999999999998875
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=153.65 Aligned_cols=166 Identities=12% Similarity=0.110 Sum_probs=129.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++++++||||+|+||++++++|+++|++|++++|..... ..+.+.. ...+..+++|++|.+++.++++.+.
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTE-----TIEQVTALGRRFLSLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHH-----HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 46678999999999999999999999999999887754210 1111221 2357888999999999988887642
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccCC---ChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQKP---LLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~~---~~~y~~s 220 (405)
+++|+||||||.... ++.+.+++|+.++.++++++. +.+ -+++|++||...+.+ ...|+.+
T Consensus 82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 161 (253)
T PRK08993 82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS 161 (253)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHH
Confidence 579999999997431 344578899999887777654 333 258999999887743 3689999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.|.+.+.++.+ ..|++++.++||++-.+.
T Consensus 162 Kaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~ 195 (253)
T PRK08993 162 KSGVMGVTRLMANEWAKHNINVNAIAPGYMATNN 195 (253)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcc
Confidence 99999999988775 468999999999998774
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=161.31 Aligned_cols=221 Identities=20% Similarity=0.264 Sum_probs=161.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC---CeEEEEecCCCCcCCCCchhHhhh-------------ccCCcEEEEcCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG---FNVIAIAREKSGIRGRNDKEETLN-------------QLQGASVCFSDVT 146 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~-------------~~~~v~~~~~Dl~ 146 (405)
.++++|+|||||||+|.-+++.|++.- .+|+++.|.+......++...... ...++..+.||+.
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 578999999999999999999999863 479999998766543333222111 1247889999998
Q ss_pred CH------HHHHHHHHhhCCCccEEEEcccccCC--CCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccccc------
Q 043385 147 NL------ESLEKSLENLGTSIDVVVSCLASRSG--GVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQ------ 211 (405)
Q Consensus 147 d~------~~l~~~~~~~~~~~d~Vv~~a~~~~~--~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~------ 211 (405)
++ .+++...++ +|+|||+||.... ..+....+|..||+++++.|++. ..+-+||+|+..+.
T Consensus 90 ~~~LGis~~D~~~l~~e----V~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i 165 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADE----VNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHI 165 (467)
T ss_pred CcccCCChHHHHHHHhc----CCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccc
Confidence 65 345555555 9999999998653 33446678999999999999997 47899999998763
Q ss_pred -------------------------------------CCChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCccc----
Q 043385 212 -------------------------------------KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFK---- 250 (405)
Q Consensus 212 -------------------------------------~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g---- 250 (405)
...+.|..+|+.+|+++...+ .+++++|+||+.|..
T Consensus 166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~---~~lPivIiRPsiI~st~~E 242 (467)
T KOG1221|consen 166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA---ENLPLVIIRPSIITSTYKE 242 (467)
T ss_pred cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc---cCCCeEEEcCCceeccccC
Confidence 234568999999999999865 699999999999986
Q ss_pred CchHHHHHHHhCCCeEEecC--Ceeee--------------hhh----------ccc---ccccceEeccCC-CCCCCHH
Q 043385 251 SLGGQVELVKEGKPYVMFGD--GKLCA--------------YCV----------LSE---DKINQILPIGGP-GKALTPL 300 (405)
Q Consensus 251 ~~~~~~~~~~~g~~~~~~g~--g~~~~--------------~~~----------~~~---~~~~~~y~i~~~-g~~~t~~ 300 (405)
|..+|++.+. |....+.|- |-... |.+ ... .....+||+++. ..++++.
T Consensus 243 P~pGWidn~~-gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~ 321 (467)
T KOG1221|consen 243 PFPGWIDNLN-GPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWG 321 (467)
T ss_pred CCCCccccCC-CCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHH
Confidence 6778887776 544444433 32221 110 011 122459999863 2679999
Q ss_pred HHHHHHHHHcC
Q 043385 301 EQGEILFRLLG 311 (405)
Q Consensus 301 ela~~l~~~~g 311 (405)
++.+...+...
T Consensus 322 ~~~e~~~~~~~ 332 (467)
T KOG1221|consen 322 DFIELALRYFE 332 (467)
T ss_pred HHHHHHHHhcc
Confidence 99999988764
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-17 Score=154.06 Aligned_cols=167 Identities=16% Similarity=0.174 Sum_probs=128.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--C
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--T 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--~ 160 (405)
+++++|+||||+|+||.+++++|+++|++|++++|++++..... ..+....++.++.+|++|++++.++++.+. +
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 79 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALA---ARLPYPGRHRWVVADLTSEAGREAVLARAREMG 79 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHHhcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence 45789999999999999999999999999999999875432111 111122468899999999999888776532 4
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
++|+||||||.... .+.+.+++|+.|+.++++++.. .+.+++|++||..... ....|+.+|...
T Consensus 80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 159 (263)
T PRK09072 80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFAL 159 (263)
T ss_pred CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHH
Confidence 68999999987432 1234677999998888877643 4456899999876653 346799999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+++.++.+ ..+++++++.||.+..+.
T Consensus 160 ~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~ 189 (263)
T PRK09072 160 RGFSEALRRELADTGVRVLYLAPRATRTAM 189 (263)
T ss_pred HHHHHHHHHHhcccCcEEEEEecCcccccc
Confidence 9888887765 468999999999887654
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-17 Score=150.07 Aligned_cols=163 Identities=18% Similarity=0.158 Sum_probs=125.1
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---CCcc
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---TSID 163 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~~~d 163 (405)
|||||++|+||+++++.|+++|++|++++|+..+. .......+.. ...+.++.+|++|+++++++++++. +++|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEG--AEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhH--HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999999999999875221 0001111211 1247889999999999998887642 4689
Q ss_pred EEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEcccccc---CCChhHHHHHHHHHHH
Q 043385 164 VVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQ---KPLLEFQRAKLKFEAE 227 (405)
Q Consensus 164 ~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E~~ 227 (405)
+|||++|.... .+.+.+++|+.++.++++++.. .+.++||++||...+ .+...|+.+|...+.+
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~ 158 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGF 158 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHH
Confidence 99999997532 2234678999999999888764 456799999997554 3457899999999998
Q ss_pred HHHHhhh--cCCceEEEEecCCcccCc
Q 043385 228 MMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 228 ~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
++.++.+ ..|+++++++||.+.++.
T Consensus 159 ~~~l~~~~~~~g~~~~~i~pg~~~~~~ 185 (239)
T TIGR01830 159 TKSLAKELASRNITVNAVAPGFIDTDM 185 (239)
T ss_pred HHHHHHHHhhcCeEEEEEEECCCCChh
Confidence 8887664 469999999999987764
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-17 Score=151.08 Aligned_cols=156 Identities=12% Similarity=0.112 Sum_probs=122.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++++++||||+|+||++++++|+++|++|++++|++... . ..++.++.+|++|+ ++++++.. +++
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~--~~~~~~~~~D~~~~--~~~~~~~~-~~i 68 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------L--SGNFHFLQLDLSDD--LEPLFDWV-PSV 68 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------c--CCcEEEEECChHHH--HHHHHHhh-CCC
Confidence 5678999999999999999999999999999999976432 1 13578899999987 44444432 359
Q ss_pred cEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHHHHH
Q 043385 163 DVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKLKFE 225 (405)
Q Consensus 163 d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E 225 (405)
|+||||||.... ++.+.+++|+.++.++++++. +.+.++||++||...+. ....|+.+|...+
T Consensus 69 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 148 (235)
T PRK06550 69 DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALA 148 (235)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHH
Confidence 999999985321 223467899999888888764 34456899999987763 3467999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.++.+ ..|+++++++||++..+.
T Consensus 149 ~~~~~la~~~~~~gi~v~~v~pg~v~t~~ 177 (235)
T PRK06550 149 GFTKQLALDYAKDGIQVFGIAPGAVKTPM 177 (235)
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCCccCcc
Confidence 998888765 468999999999998875
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.2e-17 Score=152.61 Aligned_cols=170 Identities=16% Similarity=0.171 Sum_probs=123.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC--HHHHHHHHHhh-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN--LESLEKSLENL- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~l~~~~~~~- 158 (405)
.+++++|+||||+|+||+++++.|+++|++|++++|++++.......+.. .....+..+.+|+.| .+++.++++.+
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~i~ 81 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVE-AGHPEPFAIRFDLMSAEEKEFEQFAATIA 81 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHH-cCCCCcceEEeeecccchHHHHHHHHHHH
Confidence 45678999999999999999999999999999999987653211111101 111346778899975 34555544322
Q ss_pred --C-CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccCC---ChhHH
Q 043385 159 --G-TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQKP---LLEFQ 218 (405)
Q Consensus 159 --~-~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~~---~~~y~ 218 (405)
. +++|+||||||.... ++...+++|+.++.++++++ .+.+.+++|++||.....+ ...|+
T Consensus 82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 161 (239)
T PRK08703 82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFG 161 (239)
T ss_pred HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchH
Confidence 1 468999999996321 12235789999977776665 3445579999999876643 35799
Q ss_pred HHHHHHHHHHHHHhhh--c-CCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--D-SGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~-~gi~~~ilRp~~v~g~~ 252 (405)
.+|+..+.+++.++.+ . .++++++|+||.|+++.
T Consensus 162 ~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 162 ASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ 198 (239)
T ss_pred HhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence 9999999999988775 2 26999999999999985
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=152.36 Aligned_cols=164 Identities=19% Similarity=0.183 Sum_probs=124.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC-CCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIARE-KSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
+++|||||+|+||++++++|+++|++|+++.|. +.... ........ ..++.++.+|++|++++.++++++. +
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAE---AWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHH---HHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999883 22111 00011111 1367899999999999888877542 5
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEcccccc---CCChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~ 224 (405)
++|+||||+|.... .+...+++|+.++.. ++..+++.+.++||++||.... .....|+.+|...
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~ 157 (242)
T TIGR01829 78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGM 157 (242)
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHH
Confidence 69999999986432 223456789988665 4555666778899999997654 3456799999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+++.++.+ ..+++++.++||++.++.
T Consensus 158 ~~~~~~la~~~~~~~i~v~~i~pg~~~t~~ 187 (242)
T TIGR01829 158 IGFTKALAQEGATKGVTVNTISPGYIATDM 187 (242)
T ss_pred HHHHHHHHHHhhhhCeEEEEEeeCCCcCcc
Confidence 9888887664 469999999999998875
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.2e-17 Score=152.69 Aligned_cols=170 Identities=16% Similarity=0.132 Sum_probs=126.1
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++++++++||||+ ++||++++++|+++|++|++++|+...........+... ..++.++.+|++|+++++++++.+.
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE-GQESLLLPCDVTSDEEITACFETIK 82 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC-CCceEEEecCCCCHHHHHHHHHHHH
Confidence 4567899999997 899999999999999999999876422111111111111 1357789999999999988887653
Q ss_pred ---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHH
Q 043385 160 ---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQ 218 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~ 218 (405)
+++|++|||||.... .+...+++|+.+...+++++... .-++||++||..... ....|+
T Consensus 83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~ 162 (257)
T PRK08594 83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMG 162 (257)
T ss_pred HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhH
Confidence 679999999986421 11235678888877666655432 125899999987753 346799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|++.+.+.+.++.+ ..|++++.|.||.+..+.
T Consensus 163 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 198 (257)
T PRK08594 163 VAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLS 198 (257)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHh
Confidence 9999999999988875 568999999999997763
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-17 Score=152.82 Aligned_cols=170 Identities=13% Similarity=0.201 Sum_probs=125.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCC-CchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGR-NDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~-~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++|+||||+|+||.++++.|+++|++|+++.++..+.... ....+.+.. ..++.++++|++|++++.++++.+.
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999988887654322111 111112221 1367889999999999998887642
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEE-ccc-ccc-CCChhHHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLL-SAI-CVQ-KPLLEFQRAKLK 223 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~-Ss~-~~~-~~~~~y~~sK~~ 223 (405)
+++|+||||||.... ++...+++|+.++..+++++... ..+++|++ ||. +.+ .....|+.+|.+
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~sK~a 165 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKAP 165 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhhHHH
Confidence 579999999996321 23346789999998888887643 12466665 443 333 334679999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|.+.+.++.+ ..|+++++++||.+..++
T Consensus 166 ~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~ 196 (257)
T PRK12744 166 VEHFTRAASKEFGARGISVTAVGPGPMDTPF 196 (257)
T ss_pred HHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence 99999999875 358999999999998764
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2e-17 Score=150.01 Aligned_cols=167 Identities=13% Similarity=0.074 Sum_probs=126.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++++||||+++||++++++|+++|++|++++|+.++.....+..... ..++..+.+|+.|+++++++++.+.
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQQF 80 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56789999999999999999999999999999999876543221111111 2356778899999999988877552
Q ss_pred C-CccEEEEcccccCC----------CCcchhHhHHHHHHHH----HHHHHhcC-CCEEEEEccccccCCChhHHHHHHH
Q 043385 160 T-SIDVVVSCLASRSG----------GVKDSWKIDYEANRNS----LVAGRNCG-ASHFVLLSAICVQKPLLEFQRAKLK 223 (405)
Q Consensus 160 ~-~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~l----l~aa~~~~-v~~~V~~Ss~~~~~~~~~y~~sK~~ 223 (405)
+ ++|++|||+|.... ++.+.+++|+.+...+ ++.+++.+ -++||++||.....+...|+.+|..
T Consensus 81 g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~Y~asKaa 160 (227)
T PRK08862 81 NRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQDLTGVESSNAL 160 (227)
T ss_pred CCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCcchhHHHHHH
Confidence 4 79999999974321 1122456677665444 44454443 4689999998777667789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
.+.+.+.++.+ ..+++++.|.||++-.+
T Consensus 161 l~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 161 VSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 99999988876 57899999999999876
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-17 Score=154.48 Aligned_cols=164 Identities=15% Similarity=0.156 Sum_probs=124.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc--CCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL--QGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
|+++||||+|+||.+++++|+++|++|++++|++++.... ...+... ..+.++.+|++|++++.++++.+. +
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQT---VADARALGGTVPEHRALDISDYDAVAAFAADIHAAHG 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 4799999999999999999999999999999986543211 1111111 124557899999999888777642 5
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hc-CCCEEEEEccccccC---CChhHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NC-GASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~-~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
++|+||||+|.... ++...+++|+.++.++++++. +. ..++||++||..... ....|+.+|..
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a 157 (272)
T PRK07832 78 SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFG 157 (272)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHH
Confidence 68999999986421 223467899999998888763 22 246999999987642 34579999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..++++++++||.+.++.
T Consensus 158 ~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 158 LRGLSEVLRFDLARHGIGVSVVVPGAVKTPL 188 (272)
T ss_pred HHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 88888777654 578999999999999875
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-17 Score=152.40 Aligned_cols=166 Identities=17% Similarity=0.153 Sum_probs=126.9
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+++++++||||+ ++||++++++|+++|++|++++|+.. .. ...+.+.. ..+.++++|++|+++++++++.+.
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~-~~---~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~ 78 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR-MK---KSLQKLVD-EEDLLVECDVASDESIERAFATIK 78 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH-HH---HHHHhhcc-CceeEEeCCCCCHHHHHHHHHHHH
Confidence 4567899999999 79999999999999999999998732 11 11112222 357789999999999988877653
Q ss_pred ---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHH
Q 043385 160 ---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQ 218 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~ 218 (405)
+++|++|||||.... +++..+++|+.+...+.+++... .-+++|++||..... ....|+
T Consensus 79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~ 158 (252)
T PRK06079 79 ERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMG 158 (252)
T ss_pred HHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhH
Confidence 679999999996421 12346688998877766665432 125899999987653 346799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|++.+.+.+.++.| ..|+++++|.||.|-.+.
T Consensus 159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~ 194 (252)
T PRK06079 159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLA 194 (252)
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence 9999999999988875 578999999999997763
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=154.21 Aligned_cols=169 Identities=11% Similarity=0.088 Sum_probs=130.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+++++|+||||+|+||+.++++|+++|++ |++++|+.++.... ...+.. ...+.++.+|++|++++.++++.+.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQ---AAELEALGAKAVFVQADLSDVEDCRRVVAAAD 79 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH---HHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999998 99999986543211 111111 2357788999999999988887642
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cC-CCEEEEEccccccC---CChhHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CG-ASHFVLLSAICVQK---PLLEFQR 219 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~-v~~~V~~Ss~~~~~---~~~~y~~ 219 (405)
+++|+||||+|.... .+...+++|+.+..++++++.+ .+ .+++|++||...+. ....|+.
T Consensus 80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~ 159 (260)
T PRK06198 80 EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCA 159 (260)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHH
Confidence 468999999996432 1234678999998888877643 22 35899999988763 3568999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+|..+|.+.+.++.+ ..+++++.++||+++++..
T Consensus 160 sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~ 195 (260)
T PRK06198 160 SKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE 195 (260)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence 999999999987764 4689999999999999864
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.3e-18 Score=154.53 Aligned_cols=165 Identities=15% Similarity=0.198 Sum_probs=121.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEec-CCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAR-EKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++|+||||+|+||+.+++.|+++|++|+++.+ +++..... ...+. ...++.++.+|++|++++.++++.+.
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEET---ADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH---HHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999999887654 33322111 11111 12368899999999999988876542
Q ss_pred CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHh-cC------CCEEEEEccccccC--C--ChhHH
Q 043385 160 TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRN-CG------ASHFVLLSAICVQK--P--LLEFQ 218 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~-~~------v~~~V~~Ss~~~~~--~--~~~y~ 218 (405)
+++|+||||||.... ++...+++|+.++.++++++.+ .. -++||++||..... + ...|+
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~ 158 (248)
T PRK06947 79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYA 158 (248)
T ss_pred CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccH
Confidence 469999999996421 1123578999998777654332 21 24699999976542 2 35799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|...+.+++.++.+ ..+++++++|||++..+.
T Consensus 159 ~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~ 194 (248)
T PRK06947 159 GSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI 194 (248)
T ss_pred hhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence 9999999998888764 358999999999998874
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.3e-17 Score=150.59 Aligned_cols=167 Identities=19% Similarity=0.228 Sum_probs=125.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++|+||||+|+||+++++.|+++|++|++++|++++.... ........++.++.+|++|++++.++++++.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 79 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRM---KKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVL 79 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999987543210 0111222367889999999999988876542
Q ss_pred CCccEEEEcccccCC-------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc----CCChhHHHHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG-------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ----KPLLEFQRAKLKFEA 226 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~-------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~----~~~~~y~~sK~~~E~ 226 (405)
+.+|.+||+++.... .+...+++|+.+...+++.+... .-++||++||.... .+...|+.+|...+.
T Consensus 80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~ 159 (238)
T PRK05786 80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAK 159 (238)
T ss_pred CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHH
Confidence 457999999986432 12335678888877766665442 12589999987552 334679999999998
Q ss_pred HHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 227 EMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 227 ~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+++.++.+ ..+++++++|||+++++.
T Consensus 160 ~~~~~~~~~~~~gi~v~~i~pg~v~~~~ 187 (238)
T PRK05786 160 AVEILASELLGRGIRVNGIAPTTISGDF 187 (238)
T ss_pred HHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence 88887764 469999999999999875
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=158.68 Aligned_cols=168 Identities=16% Similarity=0.166 Sum_probs=122.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC--HHHHHHHHHhhC-CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN--LESLEKSLENLG-TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~l~~~~~~~~-~~ 161 (405)
++.++||||||+||++++++|+++|++|++++|++++.......+........+..+.+|+++ .+.++++.+.+. .+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 689999999999999999999999999999999987653222111111111246778899985 333443333221 24
Q ss_pred ccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC----C-ChhHHHHH
Q 043385 162 IDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK----P-LLEFQRAK 221 (405)
Q Consensus 162 ~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~----~-~~~y~~sK 221 (405)
+|++|||||.... .+...+++|+.++.++.++ +.+.+.++||++||..++. | ...|+.+|
T Consensus 133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSK 212 (320)
T PLN02780 133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATK 212 (320)
T ss_pred ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHH
Confidence 6799999996421 1223678999997766655 4456678999999987742 2 46799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+..+.+.+.++.| ..|++++++.||.+-.+.
T Consensus 213 aal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~ 245 (320)
T PLN02780 213 AYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKM 245 (320)
T ss_pred HHHHHHHHHHHHHHhccCeEEEEEeeCceecCc
Confidence 9999999988875 569999999999997764
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-17 Score=152.92 Aligned_cols=167 Identities=16% Similarity=0.159 Sum_probs=125.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCC--CHHHHHHHHHhh
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVT--NLESLEKSLENL 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~--d~~~l~~~~~~~ 158 (405)
.++++|+||||+|+||.+++++|+++|++|++++|+.++..... ..+.. ..++.++.+|++ +.+++.++++.+
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVY---DEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHH---HHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 46789999999999999999999999999999999875432111 11211 135677888886 666676665543
Q ss_pred C---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc---CCChhHH
Q 043385 159 G---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ---KPLLEFQ 218 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~---~~~~~y~ 218 (405)
. +++|+|||||+.... .+.+.+++|+.++.++++++ ++.+.++||++||.... .....|+
T Consensus 87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 166 (247)
T PRK08945 87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYA 166 (247)
T ss_pred HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccH
Confidence 2 469999999986421 23346789999977777765 45677899999998764 3456799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|...|.+++.++.+ ..++++++++||.+-.+.
T Consensus 167 ~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~ 202 (247)
T PRK08945 167 VSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAM 202 (247)
T ss_pred HHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcc
Confidence 9999999998887764 458999999999887653
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-17 Score=152.91 Aligned_cols=169 Identities=18% Similarity=0.162 Sum_probs=125.7
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++++++||||+ ++||++++++|+++|++|++..|+.+... .....+.+. ....+.++++|++|++++.++++.+.
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGR-FEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK 82 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccch-HHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence 567899999986 79999999999999999988877543211 111112221 12346788999999999998887653
Q ss_pred ---CCccEEEEcccccC-----C--------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHH
Q 043385 160 ---TSIDVVVSCLASRS-----G--------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQ 218 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~-----~--------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~ 218 (405)
+++|++|||||... . +++..+++|+.+...+.+++... .-++||++||..... ....|+
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~ 162 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMG 162 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhh
Confidence 57999999999642 1 22446788999976666654321 126899999987653 346799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|.+.+.+.+.++.| ..|++++.|.||.+-.+.
T Consensus 163 asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~ 198 (258)
T PRK07370 163 VAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLA 198 (258)
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCch
Confidence 9999999999998876 578999999999997753
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=172.00 Aligned_cols=224 Identities=12% Similarity=0.090 Sum_probs=154.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
...++++|||||+|+||++++++|+++|++|++++|+.++.......+. ....++.++.+|++|++++.++++.+.
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 389 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIR--AAGAVAHAYRVDVSDADAMEAFAEWVRAE 389 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 3556899999999999999999999999999999998754321111111 112367889999999999988887652
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcC-CCEEEEEccccccC---CChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCG-ASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~-v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... ++...+++|+.|+.++++++ ++.+ -++||++||..++. +...|+.+|
T Consensus 390 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 469 (582)
T PRK05855 390 HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSK 469 (582)
T ss_pred cCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHH
Confidence 579999999997532 23346789999988777654 4444 36999999998874 357899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCH
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTP 299 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~ 299 (405)
++.+.+.+.++.+ ..|+++++|+||.|-.++.... .. .+......... .......+. . ...+.
T Consensus 470 aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~--~~~~~~~~~~~--~~~~~~~~~---~-~~~~p 534 (582)
T PRK05855 470 AAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATT-------RF--AGADAEDEARR--RGRADKLYQ---R-RGYGP 534 (582)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcc-------cc--CCcccchhhhH--Hhhhhhhcc---c-cCCCH
Confidence 9999998887765 5699999999999977642110 00 11000000000 000011111 1 34578
Q ss_pred HHHHHHHHHHcCCCCCeeecChH
Q 043385 300 LEQGEILFRLLGKEPKFLKVPIG 322 (405)
Q Consensus 300 ~ela~~l~~~~g~~~~~~~~p~~ 322 (405)
.|+++.+.+.+..+...+.++..
T Consensus 535 ~~va~~~~~~~~~~~~~~~~~~~ 557 (582)
T PRK05855 535 EKVAKAIVDAVKRNKAVVPVTPE 557 (582)
T ss_pred HHHHHHHHHHHHcCCCEEEeCHH
Confidence 99999999998776666666643
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.5e-17 Score=152.42 Aligned_cols=165 Identities=18% Similarity=0.168 Sum_probs=124.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~~ 162 (405)
|+|+||||+|+||++++++|+++|++|++++|++++.... .+.+....++.++.+|++|+++++++++.+. +++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~i 77 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKA---LKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGI 77 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---HHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 5899999999999999999999999999999987543211 1222222367889999999999998887542 579
Q ss_pred cEEEEcccccCC-----------CCcchhHhHHHHHH----HHHHHHH-hcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 163 DVVVSCLASRSG-----------GVKDSWKIDYEANR----NSLVAGR-NCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 163 d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~----~ll~aa~-~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
|+||||||.... ++.+.+++|+.+.. .++..+. +.+.++||++||..+.. +...|+.+|..
T Consensus 78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa 157 (259)
T PRK08340 78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAG 157 (259)
T ss_pred CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHH
Confidence 999999996421 11223456766643 3444443 33457999999998764 34679999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.++.+ ..|++++.|.||.+-.+..
T Consensus 158 ~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~ 189 (259)
T PRK08340 158 LVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGA 189 (259)
T ss_pred HHHHHHHHHHHhCCCCEEEEEeccCcccCccH
Confidence 99999998875 5689999999999887753
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-17 Score=153.95 Aligned_cols=166 Identities=14% Similarity=0.130 Sum_probs=125.3
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++++++|||||++ +||++++++|+++|++|++.+|+..... ..+.+ ........+++|++|+++++++++.+.
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~----~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~ 80 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGK----RVKPLAESLGSDFVLPCDVEDIASVDAVFEALE 80 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHH----HHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHH
Confidence 4678999999997 9999999999999999999988643211 01111 111223578999999999988887653
Q ss_pred ---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHH
Q 043385 160 ---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQ 218 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~ 218 (405)
+++|++|||||.... ++...+++|+.+..++++++... .-++||++||..... ....|+
T Consensus 81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~ 160 (271)
T PRK06505 81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMG 160 (271)
T ss_pred HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhh
Confidence 679999999996421 23346789999977766655321 126899999987643 346799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|++.+.+.+.++.| ..|++++.|.||.+..+.
T Consensus 161 asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~ 196 (271)
T PRK06505 161 VAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLA 196 (271)
T ss_pred hhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccc
Confidence 9999999999998876 578999999999997753
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-17 Score=148.47 Aligned_cols=160 Identities=17% Similarity=0.163 Sum_probs=125.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~d 163 (405)
+++++||||+|+||++++++|+++|++|++++|++++. +.+.. .+++++.+|++|.+.++++++.+. +++|
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~-------~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~d 72 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAAL-------AALQA-LGAEALALDVADPASVAGLAWKLDGEALD 72 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHH-------HHHHh-ccceEEEecCCCHHHHHHHHHHhcCCCCC
Confidence 36899999999999999999999999999999986543 22222 256789999999999988766543 3689
Q ss_pred EEEEcccccCC-----------CCcchhHhHHHHHHHHHHHHHh---cCCCEEEEEcccccc-C--CC---hhHHHHHHH
Q 043385 164 VVVSCLASRSG-----------GVKDSWKIDYEANRNSLVAGRN---CGASHFVLLSAICVQ-K--PL---LEFQRAKLK 223 (405)
Q Consensus 164 ~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~aa~~---~~v~~~V~~Ss~~~~-~--~~---~~y~~sK~~ 223 (405)
+|||++|.... +++..+++|+.++.++++++.. .+-+++|++||.... . +. ..|+.+|..
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a 152 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAA 152 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHH
Confidence 99999987521 1244788999999999988764 223579999986543 2 12 259999999
Q ss_pred HHHHHHHHhhhcCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+++.++.+..+++++.++||++..+.
T Consensus 153 ~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~ 181 (222)
T PRK06953 153 LNDALRAASLQARHATCIALHPGWVRTDM 181 (222)
T ss_pred HHHHHHHHhhhccCcEEEEECCCeeecCC
Confidence 99999988875568999999999998764
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-17 Score=152.09 Aligned_cols=167 Identities=16% Similarity=0.203 Sum_probs=129.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+++++|+||||+|+||+++++.|+++|++|++++|++++..... +.+.. ..++.++.+|++|++++.++++.+
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~- 79 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALA---ADLRAAHGVDVAVHALDLSSPEAREQLAAEA- 79 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH---HHHHhhcCCceEEEEecCCCHHHHHHHHHHh-
Confidence 356789999999999999999999999999999999876432111 11211 235788999999999999888754
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccCC---ChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQKP---LLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~~ 223 (405)
+++|++|||+|.... ++...+++|+.+...+++++ ++.+-+++|++||.....+ ...|..+|.+
T Consensus 80 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~a 159 (259)
T PRK06125 80 GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAA 159 (259)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHH
Confidence 579999999996432 23446788999877666654 4444568999999877644 4567899999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|++++.|.||.+..+.
T Consensus 160 l~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 190 (259)
T PRK06125 160 LMAFTRALGGKSLDDGVRVVGVNPGPVATDR 190 (259)
T ss_pred HHHHHHHHHHHhCccCeEEEEEecCccccHH
Confidence 99999988764 468999999999998774
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-17 Score=149.35 Aligned_cols=165 Identities=15% Similarity=0.229 Sum_probs=131.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+.+++.||||||++++|+.++.+|+++|..+++.+.+++...+..+..... ..+....+|++|.+.+.+..+.+.
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~---g~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI---GEAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc---CceeEEEecCCCHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999999999987764333322222 258889999999999888777663
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|++|||||.... ..+..+++|+.+ +++++..+.+.+-+|||.++|+.+.- ....|..||.
T Consensus 112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~ 191 (300)
T KOG1201|consen 112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKF 191 (300)
T ss_pred cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHH
Confidence 789999999998652 123477899988 66788888888888999999998873 3468999999
Q ss_pred HHHHHHHHHhhh-----cCCceEEEEecCCcc
Q 043385 223 KFEAEMMKVAEE-----DSGFTYSIVRPTAFF 249 (405)
Q Consensus 223 ~~E~~~~~~~~~-----~~gi~~~ilRp~~v~ 249 (405)
++....+.+..| ..|++.+.+.|+.+=
T Consensus 192 a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~ 223 (300)
T KOG1201|consen 192 AAVGFHESLSMELRALGKDGIKTTLVCPYFIN 223 (300)
T ss_pred HHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc
Confidence 987766665543 467999999997664
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-17 Score=174.72 Aligned_cols=205 Identities=16% Similarity=0.240 Sum_probs=150.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++++||||+|+||++++++|+++|++|++++|+++...... ..+. ...++.++.+|++|.+++.++++.+.
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 444 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELV---AEIRAKGGTAHAYTCDLTDSAAVDHTVKDILA 444 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999876542111 1111 12368889999999999998887542
Q ss_pred --CCccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccCC---ChhHHH
Q 043385 160 --TSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQKP---LLEFQR 219 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~~---~~~y~~ 219 (405)
+++|+||||||.... ++...+++|+.++.+++.+ +++.+.++||++||.+++.+ ...|+.
T Consensus 445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 524 (657)
T PRK07201 445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVA 524 (657)
T ss_pred hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHH
Confidence 469999999996421 1234678999997766554 45567789999999988743 467999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCC
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKAL 297 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~ 297 (405)
+|.+.+.+.+.++.+ ..|+++++|+||.+..+... .. . .|. .. ..+
T Consensus 525 sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~-------~~-------~---------------~~~--~~-~~~ 572 (657)
T PRK07201 525 SKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIA-------PT-------K---------------RYN--NV-PTI 572 (657)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccC-------cc-------c---------------ccc--CC-CCC
Confidence 999999999888765 46899999999999886421 00 0 010 11 356
Q ss_pred CHHHHHHHHHHHcCCCCCeeecCh
Q 043385 298 TPLEQGEILFRLLGKEPKFLKVPI 321 (405)
Q Consensus 298 t~~ela~~l~~~~g~~~~~~~~p~ 321 (405)
+..+.++.+.+.+..+...+..|.
T Consensus 573 ~~~~~a~~i~~~~~~~~~~~~~~~ 596 (657)
T PRK07201 573 SPEEAADMVVRAIVEKPKRIDTPL 596 (657)
T ss_pred CHHHHHHHHHHHHHhCCcEEeccH
Confidence 788888888887644444445554
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.5e-17 Score=156.25 Aligned_cols=165 Identities=13% Similarity=0.075 Sum_probs=124.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL- 158 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~- 158 (405)
.++++++++||||+|+||++++++|+++|++|+++++...... ....+.+.. ..++.++.+|++|.+++.++++.+
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~--~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDA--SDVLDEIRAAGAKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHH--HHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999987543210 011111211 235788999999999988877643
Q ss_pred -CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----c----C---CCEEEEEccccccC---CC
Q 043385 159 -GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----C----G---ASHFVLLSAICVQK---PL 214 (405)
Q Consensus 159 -~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~----~---v~~~V~~Ss~~~~~---~~ 214 (405)
.+++|+||||||.... ++...+++|+.++.++++++.. . + -++||++||..... ..
T Consensus 86 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 165 (306)
T PRK07792 86 GLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQ 165 (306)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCC
Confidence 2579999999997532 2344778999999888887542 1 1 25899999987653 34
Q ss_pred hhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCC
Q 043385 215 LEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTA 247 (405)
Q Consensus 215 ~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~ 247 (405)
..|+.+|..++.+.+.++.+ .+|+++++|.||.
T Consensus 166 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~ 200 (306)
T PRK07792 166 ANYGAAKAGITALTLSAARALGRYGVRANAICPRA 200 (306)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC
Confidence 67999999999999888765 5799999999983
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.9e-17 Score=154.56 Aligned_cols=172 Identities=15% Similarity=0.106 Sum_probs=124.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcC-------CCCchhHhhhcc-CCcEEEEcCCCCHHHHH
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIR-------GRNDKEETLNQL-QGASVCFSDVTNLESLE 152 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-------~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~ 152 (405)
.++++++++||||+++||.+++++|+++|++|++++|+..+.. ......+.+... ..+.++.+|++|+++++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~ 83 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR 83 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 3467899999999999999999999999999999999853211 000111122221 24678899999999999
Q ss_pred HHHHhhC---CCccEEEEcc-cccC-----C--------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEcccccc
Q 043385 153 KSLENLG---TSIDVVVSCL-ASRS-----G--------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 153 ~~~~~~~---~~~d~Vv~~a-~~~~-----~--------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~ 211 (405)
++++.+. +++|++|||| |... . .+.+.+++|+.+...++.+ +++.+-++||++||....
T Consensus 84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~ 163 (305)
T PRK08303 84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAE 163 (305)
T ss_pred HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccc
Confidence 8887653 5799999999 6320 1 1223567888876555444 444444699999996542
Q ss_pred -C-----CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 212 -K-----PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 212 -~-----~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
. ....|+.+|.++..+.+.++.+ ..|++++.|.||++-.+.
T Consensus 164 ~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~ 212 (305)
T PRK08303 164 YNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEM 212 (305)
T ss_pred ccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHH
Confidence 1 2457999999999999888775 468999999999987653
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3e-17 Score=153.10 Aligned_cols=165 Identities=17% Similarity=0.105 Sum_probs=123.8
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++|+|+||||+ ++||+++++.|+++|++|++.+|+..... ..+.+ .....-..+.+|++|.++++++++.+.
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~----~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKK----RVEPIAQELGSDYVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHH----HHHHHHHhcCCceEEEecCCCHHHHHHHHHHHH
Confidence 457899999997 79999999999999999999998742110 11111 111112578999999999988887652
Q ss_pred ---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHH
Q 043385 160 ---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQ 218 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~ 218 (405)
+++|++|||||.... .+...+++|+.+...+.+++... .-++||++||.+... ....|+
T Consensus 79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~ 158 (274)
T PRK08415 79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMG 158 (274)
T ss_pred HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhh
Confidence 679999999996421 13347789999976666654321 125899999987653 236799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
.+|++.+.+.+.++.+ ..|++++.|.||.+..+
T Consensus 159 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (274)
T PRK08415 159 VAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTL 193 (274)
T ss_pred hHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence 9999999999998875 57899999999998764
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.4e-17 Score=149.07 Aligned_cols=171 Identities=15% Similarity=0.122 Sum_probs=125.7
Q ss_pred CCCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCc-----CCCC---chhHhhhc-cCCcEEEEcCCCCHHH
Q 043385 82 NPKDINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREKSGI-----RGRN---DKEETLNQ-LQGASVCFSDVTNLES 150 (405)
Q Consensus 82 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~-----~~~~---~~~~~~~~-~~~v~~~~~Dl~d~~~ 150 (405)
.+++++|+||||+| +||++++++|+++|++|+++.|..... .... .....+.. ...+.++.+|++|.++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 46789999999995 899999999999999998876432110 0000 00011111 2357788999999999
Q ss_pred HHHHHHhhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHH----HHHHHhcCCCEEEEEccccccC--
Q 043385 151 LEKSLENLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNS----LVAGRNCGASHFVLLSAICVQK-- 212 (405)
Q Consensus 151 l~~~~~~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~l----l~aa~~~~v~~~V~~Ss~~~~~-- 212 (405)
+.++++.+. +++|+||||||.... .++..+++|+.+...+ ++.+++.+-++||++||.....
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 162 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPM 162 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCC
Confidence 988887652 568999999986432 2334678899986655 4455544456999999988764
Q ss_pred -CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 213 -PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 213 -~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+...|+.+|.+.+.+.+.++.+ ..+++++.|+||.+-.+.
T Consensus 163 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~ 205 (256)
T PRK12859 163 VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGW 205 (256)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCC
Confidence 4577999999999998888765 468999999999987753
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.6e-17 Score=150.78 Aligned_cols=164 Identities=18% Similarity=0.230 Sum_probs=124.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
++++||||+|+||.+++++|+++|++|+++.|+....... ...+.. ...+.++.+|++|++++.++++.+. ++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKET---AKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4799999999999999999999999999999985433211 111111 2357889999999999988876542 46
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcC-CCEEEEEcccccc---CCChhHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCG-ASHFVLLSAICVQ---KPLLEFQRAKLKF 224 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~-v~~~V~~Ss~~~~---~~~~~y~~sK~~~ 224 (405)
+|+||||+|.... +++..+++|+.++..+++++ ++.+ .++||++||.... .....|+.+|...
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 157 (254)
T TIGR02415 78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAV 157 (254)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHH
Confidence 8999999986432 22346789999877665554 3433 3699999997654 3457899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+++.++.+ ..++++++++||.+..+.
T Consensus 158 ~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~ 187 (254)
T TIGR02415 158 RGLTQTAAQELAPKGITVNAYCPGIVKTPM 187 (254)
T ss_pred HHHHHHHHHHhcccCeEEEEEecCcccChh
Confidence 9999887764 358999999999987764
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3e-17 Score=154.15 Aligned_cols=168 Identities=13% Similarity=0.078 Sum_probs=124.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC------cCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHH
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG------IRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSL 155 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~------~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~ 155 (405)
+++++++||||+++||++++++|+++|++|++++|+... ........+.+.. ..++.++.+|++|++++.+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 467899999999999999999999999999999876510 0001111111211 135678899999999998888
Q ss_pred HhhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC------CCEEEEEccccccC-
Q 043385 156 ENLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG------ASHFVLLSAICVQK- 212 (405)
Q Consensus 156 ~~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~------v~~~V~~Ss~~~~~- 212 (405)
+.+. +++|++|||||.... ++...+++|+.++..+++++. +.+ .++||++||.....
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 163 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG 163 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence 7652 679999999997431 234578899999777666553 221 25899999987653
Q ss_pred --CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 213 --PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 213 --~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
....|+.+|.+.+.+.+.++.+ ..|++++.|.|| +..+
T Consensus 164 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~ 205 (286)
T PRK07791 164 SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR 205 (286)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC
Confidence 3468999999999999988775 579999999998 4333
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.2e-17 Score=152.36 Aligned_cols=163 Identities=17% Similarity=0.171 Sum_probs=124.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG--TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~--~~ 161 (405)
+++++|||| |+||++++++|. +|++|++++|++++.... .+.+.. ..++.++.+|++|++++.++++.+. ++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~---~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~ 76 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAA---AKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGP 76 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHH---HHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCC
Confidence 578999998 799999999996 899999999986543211 111221 1357789999999999988887542 46
Q ss_pred ccEEEEcccccC--CCCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC-------------------------
Q 043385 162 IDVVVSCLASRS--GGVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK------------------------- 212 (405)
Q Consensus 162 ~d~Vv~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~------------------------- 212 (405)
+|+||||||... .++.+.+++|+.++.++++++... .-+++|++||.....
T Consensus 77 id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (275)
T PRK06940 77 VTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPF 156 (275)
T ss_pred CCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccc
Confidence 999999999753 346678999999999888877542 114567777765532
Q ss_pred --------CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 213 --------PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 213 --------~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+...|+.+|++.+.+.+.++.+ ..|++++.|.||++..+.
T Consensus 157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~ 206 (275)
T PRK06940 157 LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPL 206 (275)
T ss_pred ccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCcc
Confidence 1357999999999998887765 478999999999998775
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.8e-17 Score=165.64 Aligned_cols=165 Identities=16% Similarity=0.198 Sum_probs=131.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
..++++|||||+|+||++++++|+++|++|++++|+.++.... .+.. ...+..+.+|++|++++.++++.+.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKL---AEAL--GDEHLSVQADITDEAAVESAFAQIQARW 341 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh--CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999986543210 0111 1356778999999999988887652
Q ss_pred CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
+++|+||||||.... .++..+++|+.++.++++++... +-++||++||..... +...|+.+|+..
T Consensus 342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal 421 (520)
T PRK06484 342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAV 421 (520)
T ss_pred CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHH
Confidence 579999999996421 23457889999998888876553 346999999988763 457899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+++.++.+ ..|+++++|.||.+..+.
T Consensus 422 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 451 (520)
T PRK06484 422 TMLSRSLACEWAPAGIRVNTVAPGYIETPA 451 (520)
T ss_pred HHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence 9999988875 468999999999998875
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.4e-17 Score=149.24 Aligned_cols=167 Identities=14% Similarity=0.108 Sum_probs=126.2
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 82 NPKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 82 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
++++++++||||+ ++||++++++|+++|++|++++|+.+... ..+.+ .....+.++.+|++|.++++++++.+
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 82 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP----YVEPLAEELDAPIFLPLDVREPGQLEAVFARI 82 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH----HHHHHHHhhccceEEecCcCCHHHHHHHHHHH
Confidence 3567899999998 59999999999999999999999753211 01111 11234567899999999998888765
Q ss_pred C---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhH
Q 043385 159 G---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y 217 (405)
. +++|++|||||.... ++...+++|+.+...+.+++... .-++||++||..... ....|
T Consensus 83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y 162 (258)
T PRK07533 83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLM 162 (258)
T ss_pred HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhh
Confidence 3 679999999986421 23457789999977766655331 125899999987653 34679
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+.+.++.+ ..|++++.|.||.+-.+.
T Consensus 163 ~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~ 199 (258)
T PRK07533 163 GPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRA 199 (258)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChh
Confidence 99999999999988775 468999999999987653
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.9e-17 Score=147.55 Aligned_cols=163 Identities=15% Similarity=0.123 Sum_probs=124.0
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh---CCCcc
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL---GTSID 163 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~---~~~~d 163 (405)
|+||||+|+||.+++++|+++|++|++++|...... ......+.. ..++.++.+|++|.+++.++++.+ .+++|
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDA--ESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHH--HHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999999999999987643211 011111211 236889999999999998887753 25689
Q ss_pred EEEEcccccCC---------CCcchhHhHHHHHHHHHHHH-----HhcCCCEEEEEccccccC---CChhHHHHHHHHHH
Q 043385 164 VVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG-----RNCGASHFVLLSAICVQK---PLLEFQRAKLKFEA 226 (405)
Q Consensus 164 ~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa-----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~ 226 (405)
++|||+|.... ++...+++|+.++.++++++ ++.+.++||++||..... ....|+.+|...+.
T Consensus 79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~ 158 (239)
T TIGR01831 79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIG 158 (239)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence 99999986431 23446789999998888765 234557999999976543 34689999999998
Q ss_pred HHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 227 EMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 227 ~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.++.+ ..|++++.++||.+.++.
T Consensus 159 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 186 (239)
T TIGR01831 159 ATKALAVELAKRKITVNCIAPGLIDTEM 186 (239)
T ss_pred HHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence 88887764 468999999999998875
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.7e-17 Score=168.92 Aligned_cols=166 Identities=19% Similarity=0.189 Sum_probs=130.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh---C
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL---G 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~---~ 159 (405)
+.+++||||||+|+||+++++.|+++|++|++++|+.++..... ..+....++.++.+|++|++++.++++.+ .
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~---~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~ 496 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAA---AELGGPDRALGVACDVTDEAAVQAAFEEAALAF 496 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH---HHHhccCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999875432110 11111136889999999999998888754 2
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCC-CEEEEEccccccC---CChhHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGA-SHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v-~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... .+...+++|+.++.++++++ ++.+. ++||++||..+.. ....|+.+|.
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKa 576 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKA 576 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHH
Confidence 469999999996432 23446789999988886665 44454 7999999987763 3578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcc-cC
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFF-KS 251 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~-g~ 251 (405)
..+.+++.++.+ ..|+++++++|+.+| +.
T Consensus 577 a~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t 608 (681)
T PRK08324 577 AELHLVRQLALELGPDGIRVNGVNPDAVVRGS 608 (681)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeCceeecCC
Confidence 999999988764 458999999999998 43
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.7e-17 Score=167.71 Aligned_cols=168 Identities=17% Similarity=0.140 Sum_probs=125.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.+.................+..+.+|++|++++.++++.+.
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA 490 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 356789999999999999999999999999999999865432111100000011246788999999999998887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHH----HHHHhcC-CCEEEEEcccccc---CCChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSL----VAGRNCG-ASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll----~aa~~~~-v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||||.... .+...+++|+.+...+. +.+++.+ -++||++||..+. .....|+.+|
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSK 570 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAK 570 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHH
Confidence 469999999996532 12345678888765544 4445544 3589999997654 2357899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFF 249 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~ 249 (405)
.+.+.+++.++.+ ..|++++.|+||.++
T Consensus 571 aA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 571 AAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 9999999988775 468999999999987
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=149.44 Aligned_cols=165 Identities=15% Similarity=0.110 Sum_probs=126.0
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++++++|||||+ ++||.+++++|+++|++|+++.|+..... ..+.+ ........+++|++|+++++++++.+.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~----~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 83 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKK----RVEPLAAELGAFVAGHCDVTDEASIDAVFETLE 83 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHH----HHHHHHHhcCCceEEecCCCCHHHHHHHHHHHH
Confidence 456899999997 89999999999999999998887632110 11111 112335678999999999998887653
Q ss_pred ---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHH
Q 043385 160 ---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQ 218 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~ 218 (405)
+++|++|||||.... .+...+++|+.++..+++++... +-+++|++||.+... ....|+
T Consensus 84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~ 163 (272)
T PRK08159 84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMG 163 (272)
T ss_pred HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhh
Confidence 579999999996421 23447789999988888776542 236899999987653 245799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
.+|++.+.+.+.++.+ ..|+++++|.||.+..+
T Consensus 164 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 198 (272)
T PRK08159 164 VAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTL 198 (272)
T ss_pred hHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCH
Confidence 9999999999988875 57899999999998764
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.1e-17 Score=154.61 Aligned_cols=163 Identities=14% Similarity=0.234 Sum_probs=121.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||+++||.+++++|+++| ++|++++|+.++..... ..+. ....+.++.+|++|.++++++++.+.
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 78 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAA---KSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES 78 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH---HHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999999 99999999875432111 1111 11357788999999999988877652
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHH----HHHHHhcC--CCEEEEEccccccC----------
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNS----LVAGRNCG--ASHFVLLSAICVQK---------- 212 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~l----l~aa~~~~--v~~~V~~Ss~~~~~---------- 212 (405)
+++|++|||||.... .++..+++|+.+...+ ++.+++.+ .++||++||...+.
T Consensus 79 ~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~ 158 (314)
T TIGR01289 79 GRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPK 158 (314)
T ss_pred CCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCc
Confidence 579999999996421 1233678999986555 44454443 46999999986531
Q ss_pred --------------------------CChhHHHHHHHHHHHHHHHhhh---cCCceEEEEecCCcc
Q 043385 213 --------------------------PLLEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFF 249 (405)
Q Consensus 213 --------------------------~~~~y~~sK~~~E~~~~~~~~~---~~gi~~~ilRp~~v~ 249 (405)
+...|+.||.+...+.+.++.+ ..|+.++.++||.|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~ 224 (314)
T TIGR01289 159 ANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIA 224 (314)
T ss_pred ccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCccc
Confidence 2345999999988888777653 258999999999985
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-16 Score=136.89 Aligned_cols=207 Identities=22% Similarity=0.284 Sum_probs=155.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++|||||++|.+|++|.+.+...|. +=.++.-+ -.+|+++.++.+++|+. .++
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------------kd~DLt~~a~t~~lF~~--ekP 56 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------------KDADLTNLADTRALFES--EKP 56 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------------ccccccchHHHHHHHhc--cCC
Confidence 37899999999999999999999875 21122111 12799999999999987 579
Q ss_pred cEEEEcccccCC------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------C----ChhH
Q 043385 163 DVVVSCLASRSG------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------P----LLEF 217 (405)
Q Consensus 163 d~Vv~~a~~~~~------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------~----~~~y 217 (405)
..|||+|+...+ ...++++.|+.-..|++..|-+.|++++|++.|.+.|. | .-.|
T Consensus 57 thVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gY 136 (315)
T KOG1431|consen 57 THVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGY 136 (315)
T ss_pred ceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHH
Confidence 999999886543 34568899999999999999999999999999988871 1 1248
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH-----------H----HHHHHhCC-CeEEecCCeeeehhhccc
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG-----------Q----VELVKEGK-PYVMFGDGKLCAYCVLSE 281 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~-----------~----~~~~~~g~-~~~~~g~g~~~~~~~~~~ 281 (405)
..+|+.+.-.-+.+.. ++|-.++.+-|.++|||..+ + ...-..|. ++.++|.|...+.++...
T Consensus 137 syAKr~idv~n~aY~~-qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~ 215 (315)
T KOG1431|consen 137 SYAKRMIDVQNQAYRQ-QHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSD 215 (315)
T ss_pred HHHHHHHHHHHHHHHH-HhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHh
Confidence 8889877666666665 78999999999999998433 2 22233454 788999999888444433
Q ss_pred cc------------ccceEeccCCCC--CCCHHHHHHHHHHHcCCCCCee
Q 043385 282 DK------------INQILPIGGPGK--ALTPLEQGEILFRLLGKEPKFL 317 (405)
Q Consensus 282 ~~------------~~~~y~i~~~g~--~~t~~ela~~l~~~~g~~~~~~ 317 (405)
+. .-+..+++. |+ .+|++|+++++.++.|..-+.+
T Consensus 216 DLA~l~i~vlr~Y~~vEpiils~-ge~~EVtI~e~aeaV~ea~~F~G~l~ 264 (315)
T KOG1431|consen 216 DLADLFIWVLREYEGVEPIILSV-GESDEVTIREAAEAVVEAVDFTGKLV 264 (315)
T ss_pred HHHHHHHHHHHhhcCccceEecc-CccceeEHHHHHHHHHHHhCCCceEE
Confidence 21 123445554 34 8999999999999998765543
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.5e-16 Score=147.52 Aligned_cols=164 Identities=16% Similarity=0.133 Sum_probs=121.2
Q ss_pred CCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGS--TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++++++|||| +++||++++++|+++|++|++..|..... ...+.+. .......+++|++|+++++++++.+.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLE----ERVRKMAAELDSELVFRCDVASDDEINQVFADLG 79 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHH----HHHHHHHhccCCceEEECCCCCHHHHHHHHHHHH
Confidence 56789999997 67999999999999999999887753211 1111221 12245678999999999998887653
Q ss_pred ---CCccEEEEcccccCC--------------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CCh
Q 043385 160 ---TSIDVVVSCLASRSG--------------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLL 215 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~--------------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~ 215 (405)
+++|++|||||.... .+...+++|+.+...+.+++ ++.+ ++||++||.+... ...
T Consensus 80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~-g~Iv~iss~~~~~~~~~~~ 158 (261)
T PRK08690 80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRN-SAIVALSYLGAVRAIPNYN 158 (261)
T ss_pred HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcC-cEEEEEcccccccCCCCcc
Confidence 679999999997531 11224567888766555543 3332 6899999987753 346
Q ss_pred hHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 216 EFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
.|+.+|.+.+.+.+.++.+ ..|++++.|.||.+-.+
T Consensus 159 ~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~ 196 (261)
T PRK08690 159 VMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTL 196 (261)
T ss_pred cchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccch
Confidence 7999999999998887764 57899999999999765
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.2e-17 Score=150.10 Aligned_cols=163 Identities=18% Similarity=0.125 Sum_probs=117.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-CCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHH----HHHHhh
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREK-SGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLE----KSLENL 158 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~----~~~~~~ 158 (405)
++++||||+|+||++++++|+++|++|+++.|+. +..... .+.+.. ...+..+.+|++|.+++. +.++.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~ 78 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTL---AAELNARRPNSAVTCQADLSNSATLFSRCEAIIDAC 78 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHH---HHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHH
Confidence 4799999999999999999999999999987653 222111 111211 124567899999987653 333321
Q ss_pred ---CCCccEEEEcccccCC------C--------------CcchhHhHHHHHHHHHHHHHhc----------CCCEEEEE
Q 043385 159 ---GTSIDVVVSCLASRSG------G--------------VKDSWKIDYEANRNSLVAGRNC----------GASHFVLL 205 (405)
Q Consensus 159 ---~~~~d~Vv~~a~~~~~------~--------------~~~~~~~n~~g~~~ll~aa~~~----------~v~~~V~~ 205 (405)
.+++|+||||||.... + +.+.+++|+.+...+++++... +..++|++
T Consensus 79 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~ 158 (267)
T TIGR02685 79 FRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL 158 (267)
T ss_pred HHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEe
Confidence 1569999999996421 1 2245789999988777764321 12478889
Q ss_pred ccccccC---CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 206 SAICVQK---PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 206 Ss~~~~~---~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
||..... +...|+.+|.+++.+++.++.+ ..|+++++|+||.+..+
T Consensus 159 ~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~ 209 (267)
T TIGR02685 159 CDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP 209 (267)
T ss_pred hhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence 8876653 4568999999999999998775 47899999999998654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-16 Score=145.85 Aligned_cols=165 Identities=19% Similarity=0.198 Sum_probs=123.4
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++++++||||++ +||++++++|+++|++|++++|+. +.. ...+.+. ..+.+..+.+|++|+++++++++.+.
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 79 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLK---GRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELG 79 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHH---HHHHHHHhccCCceEeecCCCCHHHHHHHHHHHH
Confidence 4678999999985 999999999999999999888863 211 1112221 12356788999999999998887652
Q ss_pred ---CCccEEEEcccccCC--------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhH
Q 043385 160 ---TSIDVVVSCLASRSG--------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~--------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y 217 (405)
+++|++|||||.... .+...+++|+.+...+.+++... .-++||++||.+... ....|
T Consensus 80 ~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y 159 (262)
T PRK07984 80 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVM 159 (262)
T ss_pred hhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchh
Confidence 579999999996431 11235678988866666654321 125899999987653 24679
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
+.+|.+.+.+.+.++.+ ..|+++++|.||.+..+
T Consensus 160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~ 195 (262)
T PRK07984 160 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL 195 (262)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccch
Confidence 99999999999998875 56899999999998664
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.6e-16 Score=149.10 Aligned_cols=170 Identities=21% Similarity=0.194 Sum_probs=133.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+..+++++|||||++||.+++++|+.+|.+|+...|+.++.......+..-.....+.++++|+.|..++++..+.+.
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~ 111 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK 111 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence 456789999999999999999999999999999999986554333322221223467889999999999998887763
Q ss_pred -CCccEEEEcccccCC-------CCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccc----------------c
Q 043385 160 -TSIDVVVSCLASRSG-------GVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICV----------------Q 211 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~-------~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~----------------~ 211 (405)
.+.|++|||||.+.. +.+..+.+|+.| +..+++.++.....|||++||... |
T Consensus 112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~ 191 (314)
T KOG1208|consen 112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLY 191 (314)
T ss_pred CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCc
Confidence 689999999997642 345578899999 555666677665579999999764 1
Q ss_pred CCChhHHHHHHHHHHHHHHHhhh-cCCceEEEEecCCcccC
Q 043385 212 KPLLEFQRAKLKFEAEMMKVAEE-DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 212 ~~~~~y~~sK~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~ 251 (405)
.....|+.||.+......+++++ ..|+.+..+.||.+..+
T Consensus 192 ~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 192 SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTT 232 (314)
T ss_pred cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccc
Confidence 22234999999998888888875 23899999999999987
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-16 Score=146.66 Aligned_cols=163 Identities=20% Similarity=0.230 Sum_probs=122.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc--CCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL--QGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
|+++||||+++||.+++++|+ +|++|++++|++++..... +.+... ..+.++.+|+.|+++++++++.+. +
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~---~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 76 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLA---SDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAG 76 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHH---HHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence 579999999999999999998 5999999999876543221 112211 247789999999999988876652 6
Q ss_pred CccEEEEcccccCCC---------CcchhHhHHHHHHHH----HHHHHhcC-CCEEEEEccccccC---CChhHHHHHHH
Q 043385 161 SIDVVVSCLASRSGG---------VKDSWKIDYEANRNS----LVAGRNCG-ASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~---------~~~~~~~n~~g~~~l----l~aa~~~~-v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
++|++|||||..... ..+.+++|+.+...+ ++.+.+.+ -++||++||..... ....|+.+|.+
T Consensus 77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa 156 (246)
T PRK05599 77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAG 156 (246)
T ss_pred CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHH
Confidence 799999999975321 112456777775544 44455443 36899999987763 34679999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|++++.+.||.+..+.
T Consensus 157 ~~~~~~~la~el~~~~I~v~~v~PG~v~T~~ 187 (246)
T PRK05599 157 LDAFCQGLADSLHGSHVRLIIARPGFVIGSM 187 (246)
T ss_pred HHHHHHHHHHHhcCCCceEEEecCCcccchh
Confidence 99999988775 578999999999997763
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-16 Score=146.55 Aligned_cols=165 Identities=14% Similarity=0.091 Sum_probs=122.5
Q ss_pred CCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGS--TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++++|+|||| +++||.+++++|+++|++|++++|...... ..+.+ ........+.+|++|+++++++++.+.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 79 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD----RITEFAAEFGSDLVFPCDVASDEQIDALFASLG 79 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHH----HHHHHHHhcCCcceeeccCCCHHHHHHHHHHHH
Confidence 45789999996 679999999999999999998876422110 11111 112234568899999999998887653
Q ss_pred ---CCccEEEEcccccCC--------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhH
Q 043385 160 ---TSIDVVVSCLASRSG--------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~--------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y 217 (405)
+++|++|||||.... ++...+++|+.+...+.+++... +-++||++||..... ....|
T Consensus 80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y 159 (260)
T PRK06997 80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTM 159 (260)
T ss_pred HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchH
Confidence 679999999986421 12235788999877766665432 236899999987753 34679
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
+.+|++.+.+.+.++.+ ..|++++.|.||.+-.+
T Consensus 160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~ 195 (260)
T PRK06997 160 GLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTL 195 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccc
Confidence 99999999999988875 57899999999988664
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.5e-16 Score=146.47 Aligned_cols=161 Identities=12% Similarity=0.160 Sum_probs=120.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh--ccCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN--QLQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
|+|+||||+|+||++++++|+++|++|++++|++.+.. ..+. ...+++++.+|++|++++.++++.+. +
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKEL------TKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQ 75 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHH------HHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999999999999763210 1111 12367889999999999988887642 1
Q ss_pred --Cc--cEEEEcccccCC----------CCcchhHhHHHHHH----HHHHHHHhc-CCCEEEEEcccccc---CCChhHH
Q 043385 161 --SI--DVVVSCLASRSG----------GVKDSWKIDYEANR----NSLVAGRNC-GASHFVLLSAICVQ---KPLLEFQ 218 (405)
Q Consensus 161 --~~--d~Vv~~a~~~~~----------~~~~~~~~n~~g~~----~ll~aa~~~-~v~~~V~~Ss~~~~---~~~~~y~ 218 (405)
+. +++|||+|.... .+.+.+++|+.+.. ++++.+++. +.++||++||..+. .+...|+
T Consensus 76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~ 155 (251)
T PRK06924 76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYC 155 (251)
T ss_pred cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHh
Confidence 11 278999986421 12235677888744 444555553 34689999998765 3457899
Q ss_pred HHHHHHHHHHHHHhhh----cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE----DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~ 252 (405)
.+|.+.+.+++.++.+ ..+++++.|+||++-.+.
T Consensus 156 ~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~ 193 (251)
T PRK06924 156 SSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM 193 (251)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHh
Confidence 9999999999988764 358999999999887765
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.8e-16 Score=138.04 Aligned_cols=145 Identities=26% Similarity=0.327 Sum_probs=118.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+++||||+|+||+++++.|.++ ++|++++|++. .+.+|++|+++++++++.+ +++|+|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~-~~id~l 59 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEKV-GKVDAV 59 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHhc-CCCCEE
Confidence 47999999999999999999999 99999998642 2578999999999988864 469999
Q ss_pred EEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHHHHHHHHHHHHHHH
Q 043385 166 VSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQRAKLKFEAEMMKV 231 (405)
Q Consensus 166 v~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~~~~~ 231 (405)
|||||.... ++.+.+++|+.++.++++++... +.++||++||..... ....|+.+|...+.+.+.+
T Consensus 60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l 139 (199)
T PRK07578 60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAA 139 (199)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHH
Confidence 999996421 23345788999999988877542 235899999987753 3467999999999999988
Q ss_pred hhh-cCCceEEEEecCCcccC
Q 043385 232 AEE-DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 232 ~~~-~~gi~~~ilRp~~v~g~ 251 (405)
+.+ ..|++++.|+||++-.+
T Consensus 140 a~e~~~gi~v~~i~Pg~v~t~ 160 (199)
T PRK07578 140 ALELPRGIRINVVSPTVLTES 160 (199)
T ss_pred HHHccCCeEEEEEcCCcccCc
Confidence 775 56899999999988654
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-16 Score=137.08 Aligned_cols=266 Identities=19% Similarity=0.168 Sum_probs=184.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CCe-EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSR-GFN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
....+|||||+-|.+|..++..|..+ |.+ |++-+..+... .. .....++..|+.|...+++.+-+ +
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~--------~V--~~~GPyIy~DILD~K~L~eIVVn--~ 109 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA--------NV--TDVGPYIYLDILDQKSLEEIVVN--K 109 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch--------hh--cccCCchhhhhhccccHHHhhcc--c
Confidence 34568999999999999999988876 644 55544433221 11 12456788999999999988765 6
Q ss_pred CccEEEEcccccC----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC---------------ChhHHHHH
Q 043385 161 SIDVVVSCLASRS----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP---------------LLEFQRAK 221 (405)
Q Consensus 161 ~~d~Vv~~a~~~~----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~---------------~~~y~~sK 221 (405)
++|.+||..+... .+..-..++|+.|..|+++.|++.+.+-|| .|+++++.| .+-||.||
T Consensus 110 RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFV-PSTIGAFGPtSPRNPTPdltIQRPRTIYGVSK 188 (366)
T KOG2774|consen 110 RIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFV-PSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSK 188 (366)
T ss_pred ccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEee-cccccccCCCCCCCCCCCeeeecCceeechhH
Confidence 8999999866432 233345689999999999999999985454 899998744 34499999
Q ss_pred HHHHHHHHHHhhhcCCceEEEEecCCcccC---ch--------HHHHHHHhCCCeEEecCCe-eee----hh--------
Q 043385 222 LKFEAEMMKVAEEDSGFTYSIVRPTAFFKS---LG--------GQVELVKEGKPYVMFGDGK-LCA----YC-------- 277 (405)
Q Consensus 222 ~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~---~~--------~~~~~~~~g~~~~~~g~g~-~~~----~~-------- 277 (405)
..+|-+-..+.. +.|+++-++|...++.. ++ -|.+...+|+--+...... ... +|
T Consensus 189 VHAEL~GEy~~h-rFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~ 267 (366)
T KOG2774|consen 189 VHAELLGEYFNH-RFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLL 267 (366)
T ss_pred HHHHHHHHHHHh-hcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHH
Confidence 999986665554 68999999998888763 22 2456666676444332221 111 22
Q ss_pred -hcccccccceEeccCCCCCCCHHHHHHHHHHHc-CCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhh
Q 043385 278 -VLSEDKINQILPIGGPGKALTPLEQGEILFRLL-GKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYA 355 (405)
Q Consensus 278 -~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~-g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (405)
+..+....++||+++ ..+|..|+++.+.+.. |..+.+.+... +..+
T Consensus 268 ~a~~~~lkrr~ynvt~--~sftpee~~~~~~~~~p~~~i~y~~~sr------------------------------q~ia 315 (366)
T KOG2774|consen 268 AADSQSLKRRTYNVTG--FSFTPEEIADAIRRVMPGFEIDYDICTR------------------------------QSIA 315 (366)
T ss_pred hCCHHHhhhheeeece--eccCHHHHHHHHHhhCCCceeecccchh------------------------------hhhh
Confidence 223445678999997 7999999999998875 33233221111 1112
Q ss_pred hhhhcccCccccccccccCCccchhhHHHHHHHHhhccc
Q 043385 356 AESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGM 394 (405)
Q Consensus 356 ~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~~~~ 394 (405)
....+.+|.+.++.+..|+-.+.+-++.+++-...+...
T Consensus 316 d~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~~~~~n~ 354 (366)
T KOG2774|consen 316 DSWPMSLDDSEARTEWHEKHSLHLLSIISTVVAVHKSNL 354 (366)
T ss_pred hhcccccCchhHhhHHHHhhhhhHHHHHHHHHHHHHhhh
Confidence 234456889999999999998888888888876665543
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=147.27 Aligned_cols=166 Identities=14% Similarity=0.131 Sum_probs=123.9
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++++++||||++ +||.+++++|+++|++|++.+|+.. .. ...+.+. ......++++|++|+++++++++.+.
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~-~~---~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~ 81 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV-LE---KRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIK 81 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH-HH---HHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHH
Confidence 4678999999997 8999999999999999999888632 11 0112221 11223457899999999998887652
Q ss_pred ---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHH
Q 043385 160 ---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQ 218 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~ 218 (405)
+++|++|||+|.... .+...+++|+.+...+++++... .-++||++||..... ....|+
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~ 161 (260)
T PRK06603 82 EKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMG 161 (260)
T ss_pred HHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchh
Confidence 679999999986421 23346789999977777654321 125899999987653 346799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|++.+.+.+.++.| ..|++++.|.||.+-.+.
T Consensus 162 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~ 197 (260)
T PRK06603 162 VAKAALEASVKYLANDMGENNIRVNAISAGPIKTLA 197 (260)
T ss_pred hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchh
Confidence 9999999999988876 578999999999997653
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.1e-16 Score=144.86 Aligned_cols=171 Identities=18% Similarity=0.146 Sum_probs=131.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL-- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-- 158 (405)
.+.+|+++||||+.+||+++|++|++.|++|++.+|+++........+..... ...+..+.+|+++.++++++++..
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999998765322211111111 235788999999988777665543
Q ss_pred --CCCccEEEEcccccCC----------CCcchhHhHHHH-HHHHHHHH----HhcCCCEEEEEccccccCC---C-hhH
Q 043385 159 --GTSIDVVVSCLASRSG----------GVKDSWKIDYEA-NRNSLVAG----RNCGASHFVLLSAICVQKP---L-LEF 217 (405)
Q Consensus 159 --~~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g-~~~ll~aa----~~~~v~~~V~~Ss~~~~~~---~-~~y 217 (405)
.+++|++|||||.... .++..+++|+.| ...+..++ ++.+-..++++||...+.+ . ..|
T Consensus 85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y 164 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAY 164 (270)
T ss_pred HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccc
Confidence 3689999999997542 345578899995 44444443 3445568999999877632 2 689
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+++.+.++.| .+|+++++|-||.+..++
T Consensus 165 ~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 165 GVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 99999999999998886 789999999999999876
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.2e-16 Score=143.41 Aligned_cols=168 Identities=18% Similarity=0.087 Sum_probs=122.7
Q ss_pred CCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGS--TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+++++++|||| +++||.+++++|+++|++|++++|+..... ......... ..+.++.+|++|+++++++++.+.
T Consensus 4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRL-TERIAKRLP--EPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhH-HHHHHHhcC--CCCcEEeCCCCCHHHHHHHHHHHH
Confidence 456789999999 899999999999999999999988642100 000001111 256789999999999988877653
Q ss_pred ---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc--CCChhHHH
Q 043385 160 ---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ--KPLLEFQR 219 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~--~~~~~y~~ 219 (405)
+++|++|||||.... ++...+++|+.+...+.+++... .-+++|++|+.+.. .....|+.
T Consensus 81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~~~~~~Y~a 160 (256)
T PRK07889 81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAWPAYDWMGV 160 (256)
T ss_pred HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccCCccchhHH
Confidence 679999999997521 11235789999876666654321 12589998865432 23456899
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|+..+.+.+.++.| ..|++++.|.||.+..+.
T Consensus 161 sKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 195 (256)
T PRK07889 161 AKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLA 195 (256)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChh
Confidence 999999999988775 578999999999997753
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.5e-16 Score=145.55 Aligned_cols=166 Identities=16% Similarity=0.190 Sum_probs=122.0
Q ss_pred eEEEEcCCChhHHHHHHHHHh----CCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 87 NILVVGSTGYIGKFVVEELVS----RGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~----~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
.|+||||+++||.+++++|++ .|++|+++.|+.+........+........+.++.+|++|+++++++++.+.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 589999999999999999997 7999999999876543221111110011257889999999999988887642
Q ss_pred CC----ccEEEEcccccCC------------CCcchhHhHHHHHHHHHHH----HHhc-C-CCEEEEEccccccCC---C
Q 043385 160 TS----IDVVVSCLASRSG------------GVKDSWKIDYEANRNSLVA----GRNC-G-ASHFVLLSAICVQKP---L 214 (405)
Q Consensus 160 ~~----~d~Vv~~a~~~~~------------~~~~~~~~n~~g~~~ll~a----a~~~-~-v~~~V~~Ss~~~~~~---~ 214 (405)
+. .|+||||||.... .+...+++|+.++..+.++ +++. + -++||++||.....+ .
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~ 161 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW 161 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence 11 2699999986321 1123678999996555544 4433 2 358999999887643 4
Q ss_pred hhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 215 LEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 215 ~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..|+.+|.+.+.+.+.++.+ ..|++++.+.||++-.++
T Consensus 162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~ 201 (256)
T TIGR01500 162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM 201 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchH
Confidence 67999999999999988775 468999999999997764
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.6e-16 Score=132.91 Aligned_cols=162 Identities=16% Similarity=0.168 Sum_probs=124.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
++++||||+|+||.+++++|+++|+ .|+++.|++............+. ...++.++.+|+++++++.++++.+. +
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999996 68888887654321111011121 12356788999999998888776542 4
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---CCChhHHHHHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKLKFEAEM 228 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E~~~ 228 (405)
++|+|||+++.... ++...+++|+.++.++++++++.+.+++|++||.... .....|+.+|...+.++
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~ 160 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAANAFLDALA 160 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHHHHHHHHH
Confidence 57999999986432 2234678999999999999988888899999998664 34567999999999998
Q ss_pred HHHhhhcCCceEEEEecCCcc
Q 043385 229 MKVAEEDSGFTYSIVRPTAFF 249 (405)
Q Consensus 229 ~~~~~~~~gi~~~ilRp~~v~ 249 (405)
+.+.. .+++++.+.||.+-
T Consensus 161 ~~~~~--~~~~~~~~~~g~~~ 179 (180)
T smart00822 161 AHRRA--RGLPATSINWGAWA 179 (180)
T ss_pred HHHHh--cCCceEEEeecccc
Confidence 77664 79999999998764
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.5e-16 Score=156.49 Aligned_cols=163 Identities=17% Similarity=0.163 Sum_probs=128.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
++++++||||+++||.+++++|+++|++|++++|+.++.. +.... ..++.++.+|++|++++.++++.+.
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERAR------ERADSLGPDHHALAMDVSDEAQIREGFEQLHREF 77 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence 5689999999999999999999999999999999876542 11111 1356779999999999988887653
Q ss_pred CCccEEEEcccccC-----------CCCcchhHhHHHHHHHHHHHHHh----cCCC-EEEEEccccccC---CChhHHHH
Q 043385 160 TSIDVVVSCLASRS-----------GGVKDSWKIDYEANRNSLVAGRN----CGAS-HFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~-----------~~~~~~~~~n~~g~~~ll~aa~~----~~v~-~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||... .++...+++|+.++..+++++.. .+-+ +||++||..... ....|+.+
T Consensus 78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~as 157 (520)
T PRK06484 78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSAS 157 (520)
T ss_pred CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHH
Confidence 57999999998631 12345778999998877776543 3443 899999987763 34679999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|...+.+++.++.| ..+++++.|.||.+..+.
T Consensus 158 Kaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~ 191 (520)
T PRK06484 158 KAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191 (520)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence 99999999988775 568999999999886653
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.1e-16 Score=154.17 Aligned_cols=165 Identities=19% Similarity=0.173 Sum_probs=127.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
..++++++||||+|+||.++++.|+++|++|++++|..... ....+...-+..++.+|++|.+++.++++.+.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~-----~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 281 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGE-----ALAAVANRVGGTALALDITAPDAPARIAEHLAER 281 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHH-----HHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHh
Confidence 35678999999999999999999999999999998853221 01111111245788999999999988877542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcCC----CEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCGA----SHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~v----~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... .+...+++|+.++.++.+++..... ++||++||...+ .....|+.+|.
T Consensus 282 ~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKa 361 (450)
T PRK08261 282 HGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKA 361 (450)
T ss_pred CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHH
Confidence 469999999996532 2344678999999999998876432 689999998765 34578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
..+.+++.++.+ ..|++++++.||.+-.+
T Consensus 362 al~~~~~~la~el~~~gi~v~~v~PG~i~t~ 392 (450)
T PRK08261 362 GVIGLVQALAPLLAERGITINAVAPGFIETQ 392 (450)
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEEeCcCcch
Confidence 999988887764 57999999999987543
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.3e-16 Score=147.89 Aligned_cols=159 Identities=15% Similarity=0.228 Sum_probs=117.7
Q ss_pred EEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---CCcc
Q 043385 89 LVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---TSID 163 (405)
Q Consensus 89 lVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~~~d 163 (405)
+||||+++||.+++++|+++| ++|++++|+.++.... ...+.. ...+.++.+|+.|.++++++++.+. +++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD 77 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERA---AKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD 77 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH---HHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence 699999999999999999999 9999999986543211 111111 1357788999999999988887652 5699
Q ss_pred EEEEcccccCC----------CCcchhHhHHHHHHHH----HHHHHhcC--CCEEEEEccccccC---------------
Q 043385 164 VVVSCLASRSG----------GVKDSWKIDYEANRNS----LVAGRNCG--ASHFVLLSAICVQK--------------- 212 (405)
Q Consensus 164 ~Vv~~a~~~~~----------~~~~~~~~n~~g~~~l----l~aa~~~~--v~~~V~~Ss~~~~~--------------- 212 (405)
+||||||.... +++..+++|+.|...+ ++.+++.+ .++||++||...+.
T Consensus 78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~ 157 (308)
T PLN00015 78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD 157 (308)
T ss_pred EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence 99999996421 1234778999995555 55555554 46999999976531
Q ss_pred -----------------------CChhHHHHHHHHHHHHHHHhhh---cCCceEEEEecCCccc
Q 043385 213 -----------------------PLLEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 213 -----------------------~~~~y~~sK~~~E~~~~~~~~~---~~gi~~~ilRp~~v~g 250 (405)
+...|+.||.+.+...+.++.+ ..|+++++++||+|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 221 (308)
T PLN00015 158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIAT 221 (308)
T ss_pred hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 2345999999977777777664 2589999999999953
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=138.51 Aligned_cols=157 Identities=18% Similarity=0.208 Sum_probs=116.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
|+|+||||+|+||++++++|+++| +.|....|+.... .. .+++.++++|++|.++++++.+.+ +++|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---------~~-~~~~~~~~~Dls~~~~~~~~~~~~-~~id 69 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---------FQ-HDNVQWHALDVTDEAEIKQLSEQF-TQLD 69 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---------cc-cCceEEEEecCCCHHHHHHHHHhc-CCCC
Confidence 589999999999999999999985 5666666654321 11 246788999999999888765532 4699
Q ss_pred EEEEcccccCCC---------------CcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc------CCChhHH
Q 043385 164 VVVSCLASRSGG---------------VKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ------KPLLEFQ 218 (405)
Q Consensus 164 ~Vv~~a~~~~~~---------------~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~------~~~~~y~ 218 (405)
+||||+|..... +...+++|+.+...+++++ ++.+.++++++||.... .+...|+
T Consensus 70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~ 149 (235)
T PRK09009 70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYR 149 (235)
T ss_pred EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhh
Confidence 999999975310 1235678888866555544 44445689999875331 2345899
Q ss_pred HHHHHHHHHHHHHhhh--c--CCceEEEEecCCcccCch
Q 043385 219 RAKLKFEAEMMKVAEE--D--SGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~--~gi~~~ilRp~~v~g~~~ 253 (405)
.+|+.++.+.+.++.+ . .+++++.+.||.+..+..
T Consensus 150 asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~ 188 (235)
T PRK09009 150 ASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALS 188 (235)
T ss_pred hhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCC
Confidence 9999999999988865 1 489999999999987753
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.6e-16 Score=129.50 Aligned_cols=190 Identities=14% Similarity=0.132 Sum_probs=141.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh---C
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL---G 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~---~ 159 (405)
.+.+..+||||+.+||++++..|.++|++|.+.+++.....+.. ..+....+-..+.||+.++++++..+++. .
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata---~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~ 88 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATA---GDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL 88 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHH---hhcCCCCccceeeeccCcHHHHHHHHHHHHHhc
Confidence 34578999999999999999999999999999999876442111 22333235677899999999988877665 3
Q ss_pred CCccEEEEcccccC---------CCCcchhHhHHHHHHHHHHHHHhc----C--CCEEEEEcccccc---CCChhHHHHH
Q 043385 160 TSIDVVVSCLASRS---------GGVKDSWKIDYEANRNSLVAGRNC----G--ASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~---------~~~~~~~~~n~~g~~~ll~aa~~~----~--v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+.+++||||||+.. ++|++.+.+|+.|+..+-+++.+. + --+||++||+-.. ...+.|+++|
T Consensus 89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK 168 (256)
T KOG1200|consen 89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASK 168 (256)
T ss_pred CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhc
Confidence 78999999999864 367788899999977666665432 2 2389999998664 4567899998
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCch-----HHHHHHHhCCCeEEecCCeeee
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG-----GQVELVKEGKPYVMFGDGKLCA 275 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~-----~~~~~~~~g~~~~~~g~g~~~~ 275 (405)
..+--+.+..++| ..+++++++-||+|-.|.. ...+.+..+-|.--+|+.....
T Consensus 169 ~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA 229 (256)
T KOG1200|consen 169 GGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVA 229 (256)
T ss_pred CceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHH
Confidence 8765555444443 4899999999999998863 3556666666666666654443
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=139.44 Aligned_cols=157 Identities=15% Similarity=0.167 Sum_probs=110.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++++++||||+|+||++++++|+++|++|++++|++.... ..... .....+.+|++|.+++.+.+.. +
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~------~~~~~-~~~~~~~~D~~~~~~~~~~~~~----i 80 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNS------ESNDE-SPNEWIKWECGKEESLDKQLAS----L 80 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhh------hhhcc-CCCeEEEeeCCCHHHHHHhcCC----C
Confidence 56789999999999999999999999999999999863211 11111 1235788999999998887765 9
Q ss_pred cEEEEcccccCC------CCcchhHhHHHHHHHHHHHHHhc-------CCCEEEEEccccccCC--ChhHHHHHHHHHHH
Q 043385 163 DVVVSCLASRSG------GVKDSWKIDYEANRNSLVAGRNC-------GASHFVLLSAICVQKP--LLEFQRAKLKFEAE 227 (405)
Q Consensus 163 d~Vv~~a~~~~~------~~~~~~~~n~~g~~~ll~aa~~~-------~v~~~V~~Ss~~~~~~--~~~y~~sK~~~E~~ 227 (405)
|++|||||.... ++.+.+++|+.++.++++++... +-+.++..||.+...+ ...|+.+|++.+.+
T Consensus 81 DilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~~~~~Y~aSKaal~~~ 160 (245)
T PRK12367 81 DVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPALSPSYEISKRLIGQL 160 (245)
T ss_pred CEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCCCCchhHHHHHHHHHH
Confidence 999999996421 33457899999988888765431 1123444455444433 45699999998543
Q ss_pred H---HHHhhh--cCCceEEEEecCCccc
Q 043385 228 M---MKVAEE--DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 228 ~---~~~~~~--~~gi~~~ilRp~~v~g 250 (405)
. ++++.+ ..++.++.+.||.+..
T Consensus 161 ~~l~~~l~~e~~~~~i~v~~~~pg~~~t 188 (245)
T PRK12367 161 VSLKKNLLDKNERKKLIIRKLILGPFRS 188 (245)
T ss_pred HHHHHHHHHhhcccccEEEEecCCCccc
Confidence 3 222211 4789999999987643
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-14 Score=141.70 Aligned_cols=191 Identities=15% Similarity=0.162 Sum_probs=132.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
.+++++|+||||+|+||++++++|+++|++|++++|++++.. .... ...++..+.+|++|++++.+.+.+
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~------~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~--- 245 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKIT------LEINGEDLPVKTLHWQVGQEAALAELLEK--- 245 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHhhcCCCeEEEEeeCCCHHHHHHHhCC---
Confidence 356789999999999999999999999999999999865431 1111 112467889999999999988876
Q ss_pred CccEEEEcccccCC------CCcchhHhHHHHHHHHHHHHH----hcCC----CEEEEEccccccCCC-hhHHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG------GVKDSWKIDYEANRNSLVAGR----NCGA----SHFVLLSAICVQKPL-LEFQRAKLKFE 225 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~------~~~~~~~~n~~g~~~ll~aa~----~~~v----~~~V~~Ss~~~~~~~-~~y~~sK~~~E 225 (405)
+|++|||||.... ++.+.+++|+.++.++++++. +.+. ..+|++|+.....+. ..|+.+|.+.+
T Consensus 246 -IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~~~~~~~~Y~ASKaAl~ 324 (406)
T PRK07424 246 -VDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEVNPAFSPLYELSKRALG 324 (406)
T ss_pred -CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccccCCCchHHHHHHHHHH
Confidence 9999999986421 234578999999888888753 3321 245666654433333 46999999998
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCHHHHHHH
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTPLEQGEI 305 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~~ela~~ 305 (405)
.+.. +..+..++.+..+.||.+..+. ... ..++..++++.
T Consensus 325 ~l~~-l~~~~~~~~I~~i~~gp~~t~~--------------------------------------~~~-~~~spe~vA~~ 364 (406)
T PRK07424 325 DLVT-LRRLDAPCVVRKLILGPFKSNL--------------------------------------NPI-GVMSADWVAKQ 364 (406)
T ss_pred HHHH-HHHhCCCCceEEEEeCCCcCCC--------------------------------------CcC-CCCCHHHHHHH
Confidence 8653 3322345555555554422110 001 24678999999
Q ss_pred HHHHcCCCCCeeecChH
Q 043385 306 LFRLLGKEPKFLKVPIG 322 (405)
Q Consensus 306 l~~~~g~~~~~~~~p~~ 322 (405)
+.+.+.++...+.+|..
T Consensus 365 il~~i~~~~~~i~v~~~ 381 (406)
T PRK07424 365 ILKLAKRDFRNIIVTIN 381 (406)
T ss_pred HHHHHHCCCCEEEeCch
Confidence 99998877777777643
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.2e-15 Score=141.71 Aligned_cols=170 Identities=14% Similarity=0.097 Sum_probs=119.6
Q ss_pred CCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhH-----h---hhcc---CCcEEEEcCC--C
Q 043385 82 NPKDINILVVGS--TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEE-----T---LNQL---QGASVCFSDV--T 146 (405)
Q Consensus 82 ~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~-----~---~~~~---~~v~~~~~Dl--~ 146 (405)
++++|++||||| +.+||.++++.|+++|++|++ .|...++........ . .... .....+.+|+ .
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 84 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD 84 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence 477899999999 899999999999999999988 665444322111111 0 0000 1145778888 3
Q ss_pred CH------------------HHHHHHHHhhC---CCccEEEEcccccC-----------CCCcchhHhHHHHHHHHHHHH
Q 043385 147 NL------------------ESLEKSLENLG---TSIDVVVSCLASRS-----------GGVKDSWKIDYEANRNSLVAG 194 (405)
Q Consensus 147 d~------------------~~l~~~~~~~~---~~~d~Vv~~a~~~~-----------~~~~~~~~~n~~g~~~ll~aa 194 (405)
++ ++++++++.+. +++|++|||||... .++...+++|+.+...+.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~ 164 (303)
T PLN02730 85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF 164 (303)
T ss_pred ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 33 36677666542 67999999996421 133457789999966665554
Q ss_pred Hhc--CCCEEEEEccccccC--C-C-hhHHHHHHHHHHHHHHHhhh--c-CCceEEEEecCCcccCc
Q 043385 195 RNC--GASHFVLLSAICVQK--P-L-LEFQRAKLKFEAEMMKVAEE--D-SGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 195 ~~~--~v~~~V~~Ss~~~~~--~-~-~~y~~sK~~~E~~~~~~~~~--~-~gi~~~ilRp~~v~g~~ 252 (405)
... .-++||++||..... | . ..|+.+|.+.+.+.+.++.| . .|++++.|.||.+-.+.
T Consensus 165 ~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~ 231 (303)
T PLN02730 165 GPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRA 231 (303)
T ss_pred HHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCch
Confidence 321 116999999987653 3 3 36999999999999999886 3 58999999999997764
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.3e-15 Score=124.11 Aligned_cols=187 Identities=20% Similarity=0.329 Sum_probs=134.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|||.|.||||.+|++|+++..++||+|++++|++.+.. ..+++.+++.|+.|++++.+.+.+ .|+|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~----------~~~~~~i~q~Difd~~~~a~~l~g----~DaV 66 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLA----------ARQGVTILQKDIFDLTSLASDLAG----HDAV 66 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcc----------ccccceeecccccChhhhHhhhcC----CceE
Confidence 68999999999999999999999999999999998753 225788999999999999999998 9999
Q ss_pred EEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-------------CCChhHHHHHHHHHHHHHHHh
Q 043385 166 VSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ-------------KPLLEFQRAKLKFEAEMMKVA 232 (405)
Q Consensus 166 v~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~-------------~~~~~y~~sK~~~E~~~~~~~ 232 (405)
|..-+....+.. .........+++..+.+++.|++.++..+.. .|...|...+..+|. +..+.
T Consensus 67 IsA~~~~~~~~~---~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~-L~~Lr 142 (211)
T COG2910 67 ISAFGAGASDND---ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEF-LDSLR 142 (211)
T ss_pred EEeccCCCCChh---HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHH-HHHHh
Confidence 987765533322 2334557788889999999999999877653 122335556666663 33333
Q ss_pred hhcCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCHHHHHHHHHHHcCC
Q 043385 233 EEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGK 312 (405)
Q Consensus 233 ~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~ 312 (405)
. ...++||.+-|..++.|+.+ .+.+.+-|+ . + .+|-.|. ..+|+.|++..+...+.+
T Consensus 143 ~-~~~l~WTfvSPaa~f~PGer-------Tg~yrlggD-~-----l--------l~n~~G~-SrIS~aDYAiA~lDe~E~ 199 (211)
T COG2910 143 A-EKSLDWTFVSPAAFFEPGER-------TGNYRLGGD-Q-----L--------LVNAKGE-SRISYADYAIAVLDELEK 199 (211)
T ss_pred h-ccCcceEEeCcHHhcCCccc-------cCceEeccc-e-----E--------EEcCCCc-eeeeHHHHHHHHHHHHhc
Confidence 3 35699999999999998532 111221111 0 0 1222333 568888888888777655
Q ss_pred C
Q 043385 313 E 313 (405)
Q Consensus 313 ~ 313 (405)
+
T Consensus 200 ~ 200 (211)
T COG2910 200 P 200 (211)
T ss_pred c
Confidence 4
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.9e-16 Score=132.16 Aligned_cols=145 Identities=17% Similarity=0.225 Sum_probs=114.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecC--CCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG-FNVIAIARE--KSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~--~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
|+|+||||++.||++++++|+++| +.|+++.|+ .+... .....+. ...++.++++|++|+++++++++.+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~---~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQ---ELIQELKAPGAKITFIECDLSDPESIRALIEEVIKR 77 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHH---HHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 579999999999999999999995 578888888 22211 1111222 12578999999999999998887764
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC---ChhHHHHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP---LLEFQRAKLKFEA 226 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~~~E~ 226 (405)
+++|+||||+|.... .+.+.+++|+.+...+.+++...+-++||++||.....| ...|..+|.+.+.
T Consensus 78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~ 157 (167)
T PF00106_consen 78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSAYSASKAALRG 157 (167)
T ss_dssp HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChhHHHHHHHHHH
Confidence 689999999997652 233477899999888888887766679999999988754 3679999999999
Q ss_pred HHHHHhh
Q 043385 227 EMMKVAE 233 (405)
Q Consensus 227 ~~~~~~~ 233 (405)
+.+.++.
T Consensus 158 ~~~~la~ 164 (167)
T PF00106_consen 158 LTQSLAA 164 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998875
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.5e-16 Score=132.63 Aligned_cols=168 Identities=19% Similarity=0.235 Sum_probs=131.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+.+++++++||+.|+||+.++++|+++|..+.++..+.+..+. ..+++.......+.++++|+++..+++++++.+.
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a-~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~ 80 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEA-IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT 80 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHH-HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999888877777665421 1122233334578999999999999999998764
Q ss_pred -CCccEEEEcccccC-CCCcchhHhHHHH----HHHHHHHHHhc-C--CCEEEEEccccccCCC---hhHHHHHHHHHHH
Q 043385 160 -TSIDVVVSCLASRS-GGVKDSWKIDYEA----NRNSLVAGRNC-G--ASHFVLLSAICVQKPL---LEFQRAKLKFEAE 227 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~-~~~~~~~~~n~~g----~~~ll~aa~~~-~--v~~~V~~Ss~~~~~~~---~~y~~sK~~~E~~ 227 (405)
+.+|++||+||... .+++..+.+|+.| |...++.+.+. | -+-+|++||.....|. ..|+++|+.+-..
T Consensus 81 fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgF 160 (261)
T KOG4169|consen 81 FGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGF 160 (261)
T ss_pred hCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeee
Confidence 78999999999875 4677888999987 55677777553 2 3479999999988654 5699999998777
Q ss_pred HHHHhhh----cCCceEEEEecCCccc
Q 043385 228 MMKVAEE----DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 228 ~~~~~~~----~~gi~~~ilRp~~v~g 250 (405)
.++++.. +.|+++..+.||.+--
T Consensus 161 TRSla~~ayy~~sGV~~~avCPG~t~t 187 (261)
T KOG4169|consen 161 TRSLADLAYYQRSGVRFNAVCPGFTRT 187 (261)
T ss_pred ehhhhhhhhHhhcCEEEEEECCCcchH
Confidence 7765542 5799999999987643
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.8e-15 Score=132.63 Aligned_cols=166 Identities=19% Similarity=0.192 Sum_probs=127.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
..++-|+|||+..+.|..+|++|.++|+.|.+-.-.++..... ......++...++.|++++++++++.+-+.
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L----~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l 102 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESL----RGETKSPRLRTLQLDVTKPESVKEAAQWVKKHL 102 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHH----hhhhcCCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence 4467899999999999999999999999999888665543211 111214688899999999999998876542
Q ss_pred --CCccEEEEcccccC----------CCCcchhHhHHHHHH----HHHHHHHhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRS----------GGVKDSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~----------~~~~~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
.+...||||||... .++....++|..|+. +++...+++. +|+|++||+.+-. ...+|..|
T Consensus 103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~g~Y~~S 181 (322)
T KOG1610|consen 103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPALGPYCVS 181 (322)
T ss_pred ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcccccchhh
Confidence 45899999999542 123447789999954 5555556554 6999999999864 34789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.++|.+...+..| ..|+++.+|-||.+--+..
T Consensus 182 K~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~ 216 (322)
T KOG1610|consen 182 KFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLA 216 (322)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEeccCccccccC
Confidence 99999998887776 6899999999996655543
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.7e-15 Score=124.57 Aligned_cols=160 Identities=16% Similarity=0.169 Sum_probs=124.7
Q ss_pred CCCeEEEEcC-CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 84 KDINILVVGS-TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 84 ~~~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
..++|||||+ .|+||-+|+++|.++|+.|++..|+-+... .+....++.....|+++++.+.+....+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~-------~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMA-------QLAIQFGLKPYKLDVSKPEEVVTVSGEVRANP 78 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHh-------hHHHhhCCeeEEeccCChHHHHHHHHHHhhCC
Confidence 3478999976 499999999999999999999999988763 33323478999999999999888776552
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccCCC---hhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQKPL---LEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~~~---~~y~~sK~ 222 (405)
+..|.+|||||..-. ..+..+++|+-|..++-++.. ++ -+.||++.|..++-|. +.|.++|+
T Consensus 79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KGtIVnvgSl~~~vpfpf~~iYsAsKA 157 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KGTIVNVGSLAGVVPFPFGSIYSASKA 157 (289)
T ss_pred CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cceEEEecceeEEeccchhhhhhHHHH
Confidence 689999999996431 223467899988555554433 33 2489999999988543 57999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
+.-++.+.+..| ..|++++-+-+|.|--.
T Consensus 158 Aihay~~tLrlEl~PFgv~Vin~itGGv~T~ 188 (289)
T KOG1209|consen 158 AIHAYARTLRLELKPFGVRVINAITGGVATD 188 (289)
T ss_pred HHHHhhhhcEEeeeccccEEEEecccceecc
Confidence 999988887665 57899999988887654
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.7e-14 Score=122.65 Aligned_cols=163 Identities=15% Similarity=0.162 Sum_probs=126.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
..+-+||||||+.+||..++++|.+.|-+|++..|+++++. +.....+.+....+|+.|.++.++.++.++
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~------e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~ 76 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLA------EAKAENPEIHTEVCDVADRDSRRELVEWLKKEY 76 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHH------HHHhcCcchheeeecccchhhHHHHHHHHHhhC
Confidence 45779999999999999999999999999999999988764 445556788999999999998887776654
Q ss_pred CCccEEEEcccccCC----C-------CcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccCCC---hhHHHHH
Q 043385 160 TSIDVVVSCLASRSG----G-------VKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQKPL---LEFQRAK 221 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~----~-------~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~~~---~~y~~sK 221 (405)
...+++|||||+... . ..+-+++|+.+...+..+ ..+..-.-||.+||.-++.|. .-|..+|
T Consensus 77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTK 156 (245)
T COG3967 77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATK 156 (245)
T ss_pred CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhH
Confidence 468999999998642 1 123457888886665554 444444579999998887664 3599999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
+++-.+..++... ..++.+.=+-|+.|-.+
T Consensus 157 AaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 157 AAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 9988877766542 45788888888887664
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.6e-14 Score=130.58 Aligned_cols=169 Identities=17% Similarity=0.151 Sum_probs=122.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-cc-CCcEEEEcCCCC-HHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QL-QGASVCFSDVTN-LESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~-~~v~~~~~Dl~d-~~~l~~~~~~~~ 159 (405)
+.+++|+||||+++||.++++.|+++|+.|+++.|+..... ......... .. ..+....+|+++ .++++.+++.+.
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEA-AEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhh-HHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999998888765420 000001111 10 256777899998 888887776553
Q ss_pred ---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhcC-CCEEEEEcccccc--CC-ChhHHHHHH
Q 043385 160 ---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQ--KP-LLEFQRAKL 222 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~--~~-~~~y~~sK~ 222 (405)
+++|++|||||.... .++..+++|+.+...+.+++...- -++||++||.... .+ ...|+.+|.
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~~~~~~~~~Y~~sK~ 161 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGLGGPPGQAAYAASKA 161 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhcCCCCCcchHHHHHH
Confidence 569999999997531 334578899998776666332211 1199999999865 22 268999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|++++.+.||.+-.+.
T Consensus 162 al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~ 193 (251)
T COG1028 162 ALIGLTKALALELAPRGIRVNAVAPGYIDTPM 193 (251)
T ss_pred HHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence 999988887754 468999999999655443
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3e-14 Score=123.21 Aligned_cols=167 Identities=14% Similarity=0.188 Sum_probs=121.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCeEEEE-ecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR-GFNVIAI-AREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
++.|+||||+.+||..|+++|++. |.++++. .|++++.. ..........+++.+++.|++..+++.++.+++.
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~--~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV 80 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAA--TELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV 80 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhh--HHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence 466999999999999999999986 6665544 45566541 1111112234799999999999999988887662
Q ss_pred --CCccEEEEcccccCC------C----CcchhHhHHHH----HHHHHHHHHhcCCC-----------EEEEEcccccc-
Q 043385 160 --TSIDVVVSCLASRSG------G----VKDSWKIDYEA----NRNSLVAGRNCGAS-----------HFVLLSAICVQ- 211 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~------~----~~~~~~~n~~g----~~~ll~aa~~~~v~-----------~~V~~Ss~~~~- 211 (405)
.++|++++|||.... . +.+.+++|..+ ++.++...+++.-+ .||++||.+..
T Consensus 81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~ 160 (249)
T KOG1611|consen 81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI 160 (249)
T ss_pred ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence 579999999997531 1 23467889887 44444444443322 69999987664
Q ss_pred -----CCChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 212 -----KPLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 212 -----~~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+..+|..||.+.-...++++.+ +.++-++.+.||||--..+
T Consensus 161 ~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMg 209 (249)
T KOG1611|consen 161 GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMG 209 (249)
T ss_pred CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCC
Confidence 35578999999999888887765 5789999999999976543
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-15 Score=124.28 Aligned_cols=164 Identities=20% Similarity=0.202 Sum_probs=128.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCC-cEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQG-ASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~-v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
.+.++.|+|||+.-+||+.++..|.+.|.+|+++.|+++.+. .....-+. ++.+.+|+.+.+.+.+++..+ .
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~------sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v-~ 76 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLL------SLVKETPSLIIPIVGDLSAWEALFKLLVPV-F 76 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHH------HHHhhCCcceeeeEecccHHHHHHHhhccc-C
Confidence 457899999999999999999999999999999999987653 22222233 889999999977777766543 5
Q ss_pred CccEEEEcccccC---------CCCcchhHhHHHHHHHHHHH----HHhcCC-CEEEEEccccccCC---ChhHHHHHHH
Q 043385 161 SIDVVVSCLASRS---------GGVKDSWKIDYEANRNSLVA----GRNCGA-SHFVLLSAICVQKP---LLEFQRAKLK 223 (405)
Q Consensus 161 ~~d~Vv~~a~~~~---------~~~~~~~~~n~~g~~~ll~a----a~~~~v-~~~V~~Ss~~~~~~---~~~y~~sK~~ 223 (405)
.+|.++||||... ...+..+++|+.+..++.+. ....++ +.||.+||.+..+| .+.|..+|++
T Consensus 77 pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaA 156 (245)
T KOG1207|consen 77 PIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAA 156 (245)
T ss_pred chhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHH
Confidence 7999999999642 24455778899886655554 333443 47999999988755 4679999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.| ...|++..+.|..++-..
T Consensus 157 LDmlTk~lAlELGp~kIRVNsVNPTVVmT~M 187 (245)
T KOG1207|consen 157 LDMLTKCLALELGPQKIRVNSVNPTVVMTDM 187 (245)
T ss_pred HHHHHHHHHHhhCcceeEeeccCCeEEEecc
Confidence 99998888876 568999999999998654
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=8e-14 Score=131.07 Aligned_cols=172 Identities=12% Similarity=0.050 Sum_probs=113.3
Q ss_pred CCCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCC---------CCcCCCCc------------hhHhh-hccC
Q 043385 81 KNPKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREK---------SGIRGRND------------KEETL-NQLQ 136 (405)
Q Consensus 81 ~~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~---------~~~~~~~~------------~~~~~-~~~~ 136 (405)
.++++|+++||||+ .+||+++++.|+++|++|++.+|.+ +....... ....+ ....
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~ 83 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD 83 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence 45678999999995 8999999999999999999876542 00000000 00000 0001
Q ss_pred CcEEEEcCCCC--------HHHHHHHHHhh---CCCccEEEEcccccC---C--------CCcchhHhHHHHHHHHHHHH
Q 043385 137 GASVCFSDVTN--------LESLEKSLENL---GTSIDVVVSCLASRS---G--------GVKDSWKIDYEANRNSLVAG 194 (405)
Q Consensus 137 ~v~~~~~Dl~d--------~~~l~~~~~~~---~~~~d~Vv~~a~~~~---~--------~~~~~~~~n~~g~~~ll~aa 194 (405)
..+-+..|+++ .++++++++.+ .+++|++|||||... . ++...+++|+.+..++++++
T Consensus 84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~ 163 (299)
T PRK06300 84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHF 163 (299)
T ss_pred CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 12223233322 12355555543 267999999997532 1 23457789999977777665
Q ss_pred Hhc--CCCEEEEEccccccC--CC-h-hHHHHHHHHHHHHHHHhhh--c-CCceEEEEecCCcccCc
Q 043385 195 RNC--GASHFVLLSAICVQK--PL-L-EFQRAKLKFEAEMMKVAEE--D-SGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 195 ~~~--~v~~~V~~Ss~~~~~--~~-~-~y~~sK~~~E~~~~~~~~~--~-~gi~~~ilRp~~v~g~~ 252 (405)
... .-+++|++||..... |. . .|+.+|.+.+.+.+.++.| . .|++++.|.||.+..+.
T Consensus 164 ~p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~ 230 (299)
T PRK06300 164 GPIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRA 230 (299)
T ss_pred HHHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChh
Confidence 432 125899999877642 32 3 7999999999999998876 3 49999999999987764
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-13 Score=120.53 Aligned_cols=283 Identities=18% Similarity=0.192 Sum_probs=173.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc------CCcEEEEcCCCCHHHHHHHHHhh
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL------QGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~------~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.+..||||-||.=|++|++.|+.+||+|.++.|+.+.... . .++.+... .......||++|...+.+.+..+
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT-~-RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i 105 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNT-A-RIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI 105 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccch-h-hhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence 3578999999999999999999999999999998765431 1 11222211 25688899999999999999875
Q ss_pred CCCccEEEEcccccCC----CCcc-hhHhHHHHHHHHHHHHHhcCCC---EEEEEcccccc--------------CCChh
Q 043385 159 GTSIDVVVSCLASRSG----GVKD-SWKIDYEANRNSLVAGRNCGAS---HFVLLSAICVQ--------------KPLLE 216 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~----~~~~-~~~~n~~g~~~ll~aa~~~~v~---~~V~~Ss~~~~--------------~~~~~ 216 (405)
+++-|+|+|+.... +..+ .-+++..|+..+++|.+.++.. ||-..|+...| .|.++
T Consensus 106 --kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSP 183 (376)
T KOG1372|consen 106 --KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSP 183 (376)
T ss_pred --CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCCh
Confidence 68999999886542 2222 4467888999999999988742 67777776655 35688
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEEEEecCCccc---Cc--hHHH--------HHHHhCCC-eEEecCCeeeehh-----
Q 043385 217 FQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFK---SL--GGQV--------ELVKEGKP-YVMFGDGKLCAYC----- 277 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g---~~--~~~~--------~~~~~g~~-~~~~g~g~~~~~~----- 277 (405)
|+.+|..+--++..+.+ .+++-.| -|..+. |. .+|. ..+.-|.. ..-+|+-...+++
T Consensus 184 Ya~aKmy~~WivvNyRE-AYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~d 259 (376)
T KOG1372|consen 184 YAAAKMYGYWIVVNYRE-AYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGD 259 (376)
T ss_pred hHHhhhhheEEEEEhHH-hhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHH
Confidence 99999865433333222 2332221 233332 21 1222 22222221 1224443333322
Q ss_pred ------hcccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhh-hhhhhh
Q 043385 278 ------VLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDA-AEFGKI 350 (405)
Q Consensus 278 ------~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 350 (405)
+.-.......|.|+. |+..+.+|+++......|....+..--..... ...+. ...--.
T Consensus 260 YVEAMW~mLQ~d~PdDfViAT-ge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~--------------~n~~g~v~V~v~ 324 (376)
T KOG1372|consen 260 YVEAMWLMLQQDSPDDFVIAT-GEQHSVREFCNLAFAEIGEVLNWEGEGVDEVG--------------KNDDGVVRVKVD 324 (376)
T ss_pred HHHHHHHHHhcCCCCceEEec-CCcccHHHHHHHHHHhhCcEEeeccccccccc--------------ccCCceEEEEec
Confidence 112223345677776 58999999999998888854333211100000 00000 000011
Q ss_pred hhhhh--hhhhcccCccccccccccCCccchhhHHHHHHHHhhcc
Q 043385 351 GRYYA--AESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREG 393 (405)
Q Consensus 351 ~~~~~--~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~~~ 393 (405)
.+||. .-..+.-|.+++++.|||+| +.++.+.+++++++.
T Consensus 325 ~kYyRPtEVd~LqGdasKAk~~LgW~p---kv~f~eLVkeMv~~D 366 (376)
T KOG1372|consen 325 PKYYRPTEVDTLQGDASKAKKTLGWKP---KVTFPELVKEMVASD 366 (376)
T ss_pred ccccCcchhhhhcCChHHHHHhhCCCC---ccCHHHHHHHHHHhH
Confidence 12332 22345568999999999999 677788888887653
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.9e-14 Score=128.50 Aligned_cols=139 Identities=17% Similarity=0.163 Sum_probs=112.9
Q ss_pred HHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEEEcccccC-CCCcch
Q 043385 101 VVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRS-GGVKDS 179 (405)
Q Consensus 101 l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~-~~~~~~ 179 (405)
++++|+++|++|++++|+.++.. ..+++++|++|.++++++++.+.+++|+||||||... .+++..
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~ 67 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELV 67 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHh
Confidence 47899999999999999875421 1356789999999999999865557999999999753 355668
Q ss_pred hHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC------------------------------CChhHHHHHHHHHHH
Q 043385 180 WKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK------------------------------PLLEFQRAKLKFEAE 227 (405)
Q Consensus 180 ~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~------------------------------~~~~y~~sK~~~E~~ 227 (405)
+++|+.++..+++++... .-++||++||...+. +...|+.+|...+.+
T Consensus 68 ~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~ 147 (241)
T PRK12428 68 ARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILW 147 (241)
T ss_pred hhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHH
Confidence 899999999999887653 236999999987762 236799999999999
Q ss_pred HHHHh-hh--cCCceEEEEecCCcccCc
Q 043385 228 MMKVA-EE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 228 ~~~~~-~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.++ .+ ..|+++++|+||.+.+++
T Consensus 148 ~~~la~~e~~~~girvn~v~PG~v~T~~ 175 (241)
T PRK12428 148 TMRQAQPWFGARGIRVNCVAPGPVFTPI 175 (241)
T ss_pred HHHHHHHhhhccCeEEEEeecCCccCcc
Confidence 98887 43 569999999999999885
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.4e-14 Score=126.31 Aligned_cols=167 Identities=19% Similarity=0.233 Sum_probs=131.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~~ 162 (405)
.+|+||||+.++|..++.++..+|++|+++.|+..+..+..+.++.......+.+..+|+.|.+++...+++.. +.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 68999999999999999999999999999999998876555554444444457789999999999998888753 679
Q ss_pred cEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccC---CChhHHHHHHHHH
Q 043385 163 DVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQK---PLLEFQRAKLKFE 225 (405)
Q Consensus 163 d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~---~~~~y~~sK~~~E 225 (405)
|.+|||||.... ..+..+++|+.|+.|++.++. +.. .++|+.+||..+.- ..+.|..+|.+.-
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alr 193 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALR 193 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHH
Confidence 999999997532 223477999999998887653 332 45999999987763 4567778888776
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+...+..| .+++.++..-|+.+-.|+
T Consensus 194 gLa~~l~qE~i~~~v~Vt~~~P~~~~tpG 222 (331)
T KOG1210|consen 194 GLAEALRQELIKYGVHVTLYYPPDTLTPG 222 (331)
T ss_pred HHHHHHHHHHhhcceEEEEEcCCCCCCCc
Confidence 666555554 579999999999998874
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.5e-14 Score=128.19 Aligned_cols=158 Identities=21% Similarity=0.254 Sum_probs=120.8
Q ss_pred cCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh---C-CCccEE
Q 043385 92 GST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL---G-TSIDVV 165 (405)
Q Consensus 92 Gat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~---~-~~~d~V 165 (405)
|++ ++||++++++|+++|++|++++|+.++.... .+.+....+.+++.+|++|+++++++++.+ . +++|++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~---~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l 77 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADA---LEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDIL 77 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHH---HHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence 666 9999999999999999999999998753211 122222224567999999999998887664 2 689999
Q ss_pred EEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHHHHHHHHHHH
Q 043385 166 VSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQRAKLKFEAE 227 (405)
Q Consensus 166 v~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~ 227 (405)
|||++.... .+...+++|+.+...+++++... .-+++|++||..... ....|+.+|.+.+.+
T Consensus 78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l 157 (241)
T PF13561_consen 78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGL 157 (241)
T ss_dssp EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHH
T ss_pred EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHH
Confidence 999986542 12235678888877766665432 125899999987653 446799999999999
Q ss_pred HHHHhhh--c-CCceEEEEecCCcccCc
Q 043385 228 MMKVAEE--D-SGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 228 ~~~~~~~--~-~gi~~~ilRp~~v~g~~ 252 (405)
.+.++.+ . .||++++|.||.+..+.
T Consensus 158 ~r~lA~el~~~~gIrVN~V~pG~i~t~~ 185 (241)
T PF13561_consen 158 TRSLAKELAPKKGIRVNAVSPGPIETPM 185 (241)
T ss_dssp HHHHHHHHGGHGTEEEEEEEESSBSSHH
T ss_pred HHHHHHHhccccCeeeeeecccceeccc
Confidence 9999887 6 79999999999999765
|
... |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.8e-14 Score=115.58 Aligned_cols=152 Identities=20% Similarity=0.255 Sum_probs=123.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+++|.++|.||||-+|+.+++++++.+ -.|+++.|++.... .....+..+..|....+++...+++
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~---------at~k~v~q~~vDf~Kl~~~a~~~qg--- 83 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP---------ATDKVVAQVEVDFSKLSQLATNEQG--- 83 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc---------cccceeeeEEechHHHHHHHhhhcC---
Confidence 567889999999999999999999998 47999999863211 1123566677888888888888888
Q ss_pred CccEEEEcccccCC--CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-CChhHHHHHHHHHHHHHHHhhhcCC
Q 043385 161 SIDVVVSCLASRSG--GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-PLLEFQRAKLKFEAEMMKVAEEDSG 237 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~--~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-~~~~y~~sK~~~E~~~~~~~~~~~g 237 (405)
+|+.|++.|.+.. +.+.+++++.+-...+.++|++.|+++||.+||.++.. ..-.|...|.++|+.+.++ .-
T Consensus 84 -~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrFlY~k~KGEvE~~v~eL----~F 158 (238)
T KOG4039|consen 84 -PDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRFLYMKMKGEVERDVIEL----DF 158 (238)
T ss_pred -CceEEEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccceeeeeccchhhhhhhhc----cc
Confidence 9999999987653 45567788888888999999999999999999999874 3346889999999988874 34
Q ss_pred ceEEEEecCCcccC
Q 043385 238 FTYSIVRPTAFFKS 251 (405)
Q Consensus 238 i~~~ilRp~~v~g~ 251 (405)
-+++|+|||.+.+.
T Consensus 159 ~~~~i~RPG~ll~~ 172 (238)
T KOG4039|consen 159 KHIIILRPGPLLGE 172 (238)
T ss_pred cEEEEecCcceecc
Confidence 57999999999985
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.7e-13 Score=117.54 Aligned_cols=160 Identities=19% Similarity=0.172 Sum_probs=115.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
++|||||+|.||..+++.|+++| .+|+++.|+...........+.+.. ...+.++.+|++|++++.++++.+. ++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 68999999999999999999998 5799999994322222222233332 2468889999999999999998763 57
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---CCChhHHHHHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKLKFEAEMM 229 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E~~~~ 229 (405)
+|.|||+|+.... .....+..-+.|+.++.++.....++.||.+||+... .....|...-...+.+..
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~ 161 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSAYAAANAFLDALAR 161 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHhHHHHHHHHHHHHH
Confidence 8999999997532 1123456678889999999988889999999998764 456789999998888877
Q ss_pred HHhhhcCCceEEEEecCCc
Q 043385 230 KVAEEDSGFTYSIVRPTAF 248 (405)
Q Consensus 230 ~~~~~~~gi~~~ilRp~~v 248 (405)
.... .|.+++.|.-|.+
T Consensus 162 ~~~~--~g~~~~sI~wg~W 178 (181)
T PF08659_consen 162 QRRS--RGLPAVSINWGAW 178 (181)
T ss_dssp HHHH--TTSEEEEEEE-EB
T ss_pred HHHh--CCCCEEEEEcccc
Confidence 6654 7899998876543
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.8e-13 Score=153.69 Aligned_cols=169 Identities=12% Similarity=0.051 Sum_probs=130.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcC------C--------------------------------
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIR------G-------------------------------- 124 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~------~-------------------------------- 124 (405)
+++++|||||+++||..++++|+++ |++|++++|++.... .
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 4689999999999999999999998 699999999831000 0
Q ss_pred C--Cc----hhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--CCccEEEEcccccCC---------CCcchhHhHHHH
Q 043385 125 R--ND----KEETLNQ-LQGASVCFSDVTNLESLEKSLENLG--TSIDVVVSCLASRSG---------GVKDSWKIDYEA 186 (405)
Q Consensus 125 ~--~~----~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~--~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g 186 (405)
. .. .+..+.. ...+.++.+|++|.++++++++.+. +++|.||||||.... ++.+.+++|+.|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 0 00 0011111 1357889999999999998887653 469999999997432 344588999999
Q ss_pred HHHHHHHHHhcCCCEEEEEcccccc---CCChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCc
Q 043385 187 NRNSLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 187 ~~~ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
+.++++++.....++||++||..+. .....|+.+|.....+.+.++.+..+++++.|.||.+-+..
T Consensus 2156 ~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813 2156 LLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGGM 2224 (2582)
T ss_pred HHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCCc
Confidence 9999999988777899999998775 34578999999999888887765557999999999887653
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.5e-13 Score=121.28 Aligned_cols=165 Identities=18% Similarity=0.169 Sum_probs=128.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHH----HHHHHHhhCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLES----LEKSLENLGT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~----l~~~~~~~~~ 160 (405)
+.=.+|||||.+||++.+++|+++|.+|+++.|+.+++....+++..... -.+.++..|.++.+. +.+.+.+ -
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~~--~ 125 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLAG--L 125 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhcC--C
Confidence 35589999999999999999999999999999999998766555544444 468889999987664 5555555 3
Q ss_pred CccEEEEcccccCCCC-----------cchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccccCCC---hhHHHHHH
Q 043385 161 SIDVVVSCLASRSGGV-----------KDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQKPL---LEFQRAKL 222 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~-----------~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~~~~---~~y~~sK~ 222 (405)
++.++|||+|.....+ .+.+.+|+.+ ++-++.-+.+.+-+-||++||.+.-.|. +.|+.+|.
T Consensus 126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~ 205 (312)
T KOG1014|consen 126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKA 205 (312)
T ss_pred ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHH
Confidence 7889999999865322 2345667766 5556667777777789999999987654 56999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..+.....+.+| ..|+.+-.+-|..|-.+.
T Consensus 206 ~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm 237 (312)
T KOG1014|consen 206 FVDFFSRCLQKEYESKGIFVQSVIPYLVATKM 237 (312)
T ss_pred HHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence 888887777765 579999999998887764
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.3e-13 Score=113.87 Aligned_cols=150 Identities=19% Similarity=0.162 Sum_probs=121.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
..+++.|+.||.|+++++.-...++.|..+.|++.+. -...+...+.|+++|....+-+...+.+ +..+
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~-------~l~sw~~~vswh~gnsfssn~~k~~l~g----~t~v 121 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQ-------TLSSWPTYVSWHRGNSFSSNPNKLKLSG----PTFV 121 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcc-------hhhCCCcccchhhccccccCcchhhhcC----Cccc
Confidence 4689999999999999999999999999999997642 1122334688899998776667777776 8888
Q ss_pred EEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-C--ChhHHHHHHHHHHHHHHHhhhcCCceEEE
Q 043385 166 VSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-P--LLEFQRAKLKFEAEMMKVAEEDSGFTYSI 242 (405)
Q Consensus 166 v~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-~--~~~y~~sK~~~E~~~~~~~~~~~gi~~~i 242 (405)
+-+++... ....+.++|-+...+.++++.++|+++|||+|.....- | ...|..+|+++|..+.. ..+.+-++
T Consensus 122 ~e~~ggfg-n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~Ell~----~~~~rgii 196 (283)
T KOG4288|consen 122 YEMMGGFG-NIILMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAELLK----KFRFRGII 196 (283)
T ss_pred HHHhcCcc-chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhccchHHHHHHHH----hcCCCcee
Confidence 88887552 34456678888888999999999999999999766532 2 24799999999999988 46789999
Q ss_pred EecCCcccC
Q 043385 243 VRPTAFFKS 251 (405)
Q Consensus 243 lRp~~v~g~ 251 (405)
+|||.+||.
T Consensus 197 lRPGFiyg~ 205 (283)
T KOG4288|consen 197 LRPGFIYGT 205 (283)
T ss_pred eccceeecc
Confidence 999999995
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.7e-13 Score=110.55 Aligned_cols=162 Identities=17% Similarity=0.220 Sum_probs=124.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.++-..+||||..++|...++.|.++|..|.+++-..++.. +..+. ..++.+...|++.+++++.+++...
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~------~vakelg~~~vf~padvtsekdv~aala~ak~k 80 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGA------DVAKELGGKVVFTPADVTSEKDVRAALAKAKAK 80 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccch------HHHHHhCCceEEeccccCcHHHHHHHHHHHHhh
Confidence 35668899999999999999999999999999998877653 22222 2468899999999999999887653
Q ss_pred -CCccEEEEcccccC---------------CCCcchhHhHHHHHHHHHHHHHh--------c-C-CCEEEEEccccccC-
Q 043385 160 -TSIDVVVSCLASRS---------------GGVKDSWKIDYEANRNSLVAGRN--------C-G-ASHFVLLSAICVQK- 212 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~---------------~~~~~~~~~n~~g~~~ll~aa~~--------~-~-v~~~V~~Ss~~~~~- 212 (405)
++.|+.+||||... ++..+.+++|+.||.|+++.-.. . | -+-+|...|..++.
T Consensus 81 fgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg 160 (260)
T KOG1199|consen 81 FGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG 160 (260)
T ss_pred ccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC
Confidence 78999999999742 13344678999999999885421 1 2 12578888888774
Q ss_pred --CChhHHHHHHHHHHHH----HHHhhhcCCceEEEEecCCcccCc
Q 043385 213 --PLLEFQRAKLKFEAEM----MKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 213 --~~~~y~~sK~~~E~~~----~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
....|..||.++--+. ++++. .||+++.|-||.+--|+
T Consensus 161 q~gqaaysaskgaivgmtlpiardla~--~gir~~tiapglf~tpl 204 (260)
T KOG1199|consen 161 QTGQAAYSASKGAIVGMTLPIARDLAG--DGIRFNTIAPGLFDTPL 204 (260)
T ss_pred ccchhhhhcccCceEeeechhhhhccc--CceEEEeecccccCChh
Confidence 4578999998865443 44443 79999999999887775
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.6e-11 Score=102.90 Aligned_cols=154 Identities=18% Similarity=0.240 Sum_probs=104.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~~ 162 (405)
|+++||||||++|. +++.|+++|++|++++|++++.... ...+.....+.++.+|+.|++++.++++++. +++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l---~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~i 76 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENV---KRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPF 76 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHH---HHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57999999988775 9999999999999999986543211 0112222467888999999999999888753 568
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC----EEEEEccccccCCChhHHHHHHHHHHHHHHHhhhcCCc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS----HFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGF 238 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~----~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~~~gi 238 (405)
|.+|+. +++.+..++..+|++.|++ +||++=...+..+ +...+... ....
T Consensus 77 d~lv~~-------------vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-------~~~~~~~~------~~~~ 130 (177)
T PRK08309 77 DLAVAW-------------IHSSAKDALSVVCRELDGSSETYRLFHVLGSAASDP-------RIPSEKIG------PARC 130 (177)
T ss_pred eEEEEe-------------ccccchhhHHHHHHHHccCCCCceEEEEeCCcCCch-------hhhhhhhh------hcCC
Confidence 888875 3466789999999999998 8988754444322 11112211 1345
Q ss_pred eEEEEecCCcccCc-h----------HHHHHHHhCCCeEEec
Q 043385 239 TYSIVRPTAFFKSL-G----------GQVELVKEGKPYVMFG 269 (405)
Q Consensus 239 ~~~ilRp~~v~g~~-~----------~~~~~~~~g~~~~~~g 269 (405)
.|--|..|.+.... . +.++.+..+.+..++|
T Consensus 131 ~~~~i~lgf~~~~~~~rwlt~~ei~~gv~~~~~~~~~~~~~g 172 (177)
T PRK08309 131 SYRRVILGFVLEDTYSRWLTHEEISDGVIKAIESDADEHVVG 172 (177)
T ss_pred ceEEEEEeEEEeCCccccCchHHHHHHHHHHHhcCCCeEEEE
Confidence 66767777776542 2 2345555555555544
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.8e-11 Score=102.56 Aligned_cols=156 Identities=17% Similarity=0.217 Sum_probs=109.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEE--EEecCCCCcCCCCchhHhhhccCCcEEE--------EcCCCCHHHHHH
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVI--AIAREKSGIRGRNDKEETLNQLQGASVC--------FSDVTNLESLEK 153 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~--~l~r~~~~~~~~~~~~~~~~~~~~v~~~--------~~Dl~d~~~l~~ 153 (405)
+++.+||||++.+||..++..+.+++.+.. +..|..... .++.+. .+|+++...+..
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~-------------~~L~v~~gd~~v~~~g~~~e~~~l~a 71 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAEL-------------EGLKVAYGDDFVHVVGDITEEQLLGA 71 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccc-------------cceEEEecCCcceechHHHHHHHHHH
Confidence 346799999999999999999998876533 344433221 233333 344444443333
Q ss_pred HHHhh---CCCccEEEEcccccCC------------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccCC
Q 043385 154 SLENL---GTSIDVVVSCLASRSG------------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQKP 213 (405)
Q Consensus 154 ~~~~~---~~~~d~Vv~~a~~~~~------------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~~ 213 (405)
.++.. .++-|.||||||...+ .|..+|+.|+.....+...+. +.. .+-+|++||..+..|
T Consensus 72 l~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p 151 (253)
T KOG1204|consen 72 LREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRP 151 (253)
T ss_pred HHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhcc
Confidence 33221 2579999999996531 345688999988666665543 332 367999999998877
Q ss_pred C---hhHHHHHHHHHHHHHHHhhhcC-CceEEEEecCCcccCc
Q 043385 214 L---LEFQRAKLKFEAEMMKVAEEDS-GFTYSIVRPTAFFKSL 252 (405)
Q Consensus 214 ~---~~y~~sK~~~E~~~~~~~~~~~-gi~~~ilRp~~v~g~~ 252 (405)
. ..|+.+|++.+.+.+.++.|++ ++++..++||.+--+.
T Consensus 152 ~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~m 194 (253)
T KOG1204|consen 152 FSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQM 194 (253)
T ss_pred ccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchh
Confidence 6 4699999999999999998875 9999999999876543
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.9e-10 Score=98.97 Aligned_cols=89 Identities=15% Similarity=0.080 Sum_probs=67.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++++||||+|+||+++++.|+++|++|++++|+.+...... ..+. ....+.++.+|++|.+++.++++.+.
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~ 89 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATV---EEITNLGGEALFVSYDMEKQGDWQRVISITLN 89 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999998865432111 1111 12346678999999999888765432
Q ss_pred --CCccEEEEcccccC
Q 043385 160 --TSIDVVVSCLASRS 173 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~ 173 (405)
+++|++|||||...
T Consensus 90 ~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 90 AFSRIDMLFQNAGLYK 105 (169)
T ss_pred HcCCCCEEEECCCcCC
Confidence 57999999999643
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.3e-10 Score=99.56 Aligned_cols=167 Identities=12% Similarity=0.153 Sum_probs=118.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-----eEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHh
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-----NVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-----~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
.|.+||||+++++|.+||.+|++... .|.+..|+-++.++.-..+..... .-+++++..|+++-.++.++.++
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 46799999999999999999998743 366677887765433222222221 12688999999999888887776
Q ss_pred hC---CCccEEEEcccccCC------------------------------------CCcchhHhHHHHHHHHHHHHH---
Q 043385 158 LG---TSIDVVVSCLASRSG------------------------------------GVKDSWKIDYEANRNSLVAGR--- 195 (405)
Q Consensus 158 ~~---~~~d~Vv~~a~~~~~------------------------------------~~~~~~~~n~~g~~~ll~aa~--- 195 (405)
+. .+.|.|+.|||.++. +...+++.||-|..-++....
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll 162 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL 162 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence 54 469999999997641 123467889998666555432
Q ss_pred -hcCCCEEEEEcccccc------------CCChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 196 -NCGASHFVLLSAICVQ------------KPLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 196 -~~~v~~~V~~Ss~~~~------------~~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
...-.++|++||..+. ....+|..||+..+-+-.+..+. ..|+.-.++.||....+
T Consensus 163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~ 233 (341)
T KOG1478|consen 163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN 233 (341)
T ss_pred hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence 2233489999998774 34568999999987655554442 45788888999987664
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.8e-10 Score=104.38 Aligned_cols=119 Identities=17% Similarity=0.123 Sum_probs=89.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
.+++||+|+|++|.||+.++..|+.++ .+++++++.. ..+....+. .... .....+.+|+.++.+++++
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~--~~~~--~~~v~~~td~~~~~~~l~g--- 76 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLS--HIDT--PAKVTGYADGELWEKALRG--- 76 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--Ccccccchh--hcCc--CceEEEecCCCchHHHhCC---
Confidence 567799999999999999999998665 6899999932 221111111 1111 2334566666666788888
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
+|+||+++|.... .+.+.+..|+..++++++++++++++++|+++|-.+.
T Consensus 77 -aDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvd 129 (321)
T PTZ00325 77 -ADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVN 129 (321)
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHH
Confidence 9999999997543 3456789999999999999999999999999987553
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.9e-09 Score=99.29 Aligned_cols=166 Identities=17% Similarity=0.128 Sum_probs=110.1
Q ss_pred CCCeEEEEcCCChhHHH--HHHHHHhCCCeEEEEecCCCCcCC---------CCchhHhhhcc-CCcEEEEcCCCCHHHH
Q 043385 84 KDINILVVGSTGYIGKF--VVEELVSRGFNVIAIAREKSGIRG---------RNDKEETLNQL-QGASVCFSDVTNLESL 151 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~--l~~~L~~~g~~V~~l~r~~~~~~~---------~~~~~~~~~~~-~~v~~~~~Dl~d~~~l 151 (405)
.+|++|||||++++|.+ +++.| ++|++|+++++..++... .....+..... ..+..+.+|+++++.+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v 118 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK 118 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence 46899999999999999 89999 999999998864322110 00111122221 2356789999999998
Q ss_pred HHHHHhhC---CCccEEEEcccccCCCC-----------------c------------------ch------hHhHHHHH
Q 043385 152 EKSLENLG---TSIDVVVSCLASRSGGV-----------------K------------------DS------WKIDYEAN 187 (405)
Q Consensus 152 ~~~~~~~~---~~~d~Vv~~a~~~~~~~-----------------~------------------~~------~~~n~~g~ 187 (405)
.++++.+. +++|+||||+|...... . .. ..++++|.
T Consensus 119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMgg 198 (398)
T PRK13656 119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGG 198 (398)
T ss_pred HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhcc
Confidence 88887663 68999999999752211 0 00 11234443
Q ss_pred H---HHHHHHHhcCC----CEEEEEccccccCCCh-----hHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCccc
Q 043385 188 R---NSLVAGRNCGA----SHFVLLSAICVQKPLL-----EFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 188 ~---~ll~aa~~~~v----~~~V~~Ss~~~~~~~~-----~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g 250 (405)
. .-+++...+++ .++|-.|..+...... ..+.+|...|..++.++.+ ..|+++.++-++.+.-
T Consensus 199 edw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T 275 (398)
T PRK13656 199 EDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVT 275 (398)
T ss_pred chHHHHHHHHHhcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccc
Confidence 2 22333343331 3788888777653333 4579999999999888775 4689999998876654
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-08 Score=88.67 Aligned_cols=217 Identities=15% Similarity=0.160 Sum_probs=140.4
Q ss_pred CCCeEEEEcCCChhHHHHHH-----HHHhCC----CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH
Q 043385 84 KDINILVVGSTGYIGKFVVE-----ELVSRG----FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS 154 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~-----~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~ 154 (405)
+.++.++-+++|+|+..|.. ++-+.+ |+|++++|.+.+. ++.|-..|..-.. -..
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~--------------ritw~el~~~Gip--~sc 74 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA--------------RITWPELDFPGIP--ISC 74 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc--------------ccccchhcCCCCc--eeh
Confidence 34567788999999988876 444444 8999999998764 3333333322111 011
Q ss_pred HHhhCCCccEEEEcccccCCCCcchhHhHHHH-----HHHHHHHHHhcC--CCEEEEEccccccCCC--hhHH-------
Q 043385 155 LENLGTSIDVVVSCLASRSGGVKDSWKIDYEA-----NRNSLVAGRNCG--ASHFVLLSAICVQKPL--LEFQ------- 218 (405)
Q Consensus 155 ~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g-----~~~ll~aa~~~~--v~~~V~~Ss~~~~~~~--~~y~------- 218 (405)
.++ ++.+.+|+...-..|...++.|+.| +..+.++...+. .+.+|.+|..++|.|. .+|.
T Consensus 75 ~a~----vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qg 150 (315)
T KOG3019|consen 75 VAG----VNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQG 150 (315)
T ss_pred HHH----HhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCC
Confidence 122 4555555554444566666777766 778888888764 3579999999998652 2221
Q ss_pred ---HHH--HHHHHHHHHHhhhcCCceEEEEecCCcccCchHHHHHHH------hCCCeEEecCCeeeehhhc--------
Q 043385 219 ---RAK--LKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVK------EGKPYVMFGDGKLCAYCVL-------- 279 (405)
Q Consensus 219 ---~sK--~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~~~~~~~------~g~~~~~~g~g~~~~~~~~-------- 279 (405)
.++ .+-|...+.. ....++++||.|.|.|..++.+..+. .|+ .+|+|.|.+-+++
T Consensus 151 fd~~srL~l~WE~aA~~~---~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GG---PlGsG~Q~fpWIHv~DL~~li 224 (315)
T KOG3019|consen 151 FDILSRLCLEWEGAALKA---NKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGG---PLGSGQQWFPWIHVDDLVNLI 224 (315)
T ss_pred hHHHHHHHHHHHHHhhcc---CcceeEEEEEEeEEEecCCcchhhhhhhhhhccCC---cCCCCCeeeeeeehHHHHHHH
Confidence 122 2333333322 23599999999999998766443222 233 3688888873322
Q ss_pred ----ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHH
Q 043385 280 ----SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAI 328 (405)
Q Consensus 280 ----~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~ 328 (405)
+.....++.|-..| ++.+..|+++.+..+++++. +.++|..+.....
T Consensus 225 ~~ale~~~v~GViNgvAP-~~~~n~Ef~q~lg~aL~Rp~-~~pvP~fvvqA~f 275 (315)
T KOG3019|consen 225 YEALENPSVKGVINGVAP-NPVRNGEFCQQLGSALSRPS-WLPVPDFVVQALF 275 (315)
T ss_pred HHHHhcCCCCceecccCC-CccchHHHHHHHHHHhCCCc-ccCCcHHHHHHHh
Confidence 22345678888888 89999999999999999754 4588887666543
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.9e-09 Score=98.06 Aligned_cols=116 Identities=14% Similarity=0.077 Sum_probs=85.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..||+|||++|.||..++..|+.++ .+++++++++ ..+... +........ ...++.+.+++.+++++ +
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~--Dl~~~~~~~--~i~~~~~~~d~~~~l~~----a 87 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAA--DVSHINTPA--QVRGFLGDDQLGDALKG----A 87 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEc--hhhhCCcCc--eEEEEeCCCCHHHHcCC----C
Confidence 4699999999999999999999776 4899999977 221111 111111112 23354444557788888 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
|+|||+||.... .+.+....|+..++++++.+++++.+.+|+++|--+
T Consensus 88 DiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv 138 (323)
T PLN00106 88 DLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV 138 (323)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 999999997543 455688899999999999999999999988887544
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.3e-08 Score=97.53 Aligned_cols=97 Identities=21% Similarity=0.244 Sum_probs=77.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
+|+|||.|| |+||+.++..|+++| .+|++.+|+.++.... . .....+++.++.|+.|.+.+.+++++ .|
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i----~-~~~~~~v~~~~vD~~d~~al~~li~~----~d 70 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARI----A-ELIGGKVEALQVDAADVDALVALIKD----FD 70 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHH----H-hhccccceeEEecccChHHHHHHHhc----CC
Confidence 478999999 999999999999999 8999999998765311 0 11123799999999999999999998 89
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEE
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~ 205 (405)
+|||++.+.. ..+++++|.+.|+ ++|=+
T Consensus 71 ~VIn~~p~~~-------------~~~i~ka~i~~gv-~yvDt 98 (389)
T COG1748 71 LVINAAPPFV-------------DLTILKACIKTGV-DYVDT 98 (389)
T ss_pred EEEEeCCchh-------------hHHHHHHHHHhCC-CEEEc
Confidence 9999887542 3368888888887 34433
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.3e-07 Score=77.93 Aligned_cols=163 Identities=18% Similarity=0.175 Sum_probs=110.2
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 82 NPKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 82 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.+++|++||+|-. .-|+..|++.|.++|.++.....++ ++. +..+++ +......+++||+++.+++++.|+.+
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~---krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i 78 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLE---KRVEELAEELGSDLVLPCDVTNDESIDALFATI 78 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHH---HHHHHHHhhccCCeEEecCCCCHHHHHHHHHHH
Confidence 4679999999864 6799999999999999988877765 221 111222 22233467899999999999999877
Q ss_pred C---CCccEEEEcccccCCCC--cchhHh-----------HHHHHHHHHHHHHhc--CCCEEEEEcccc---ccCCChhH
Q 043385 159 G---TSIDVVVSCLASRSGGV--KDSWKI-----------DYEANRNSLVAGRNC--GASHFVLLSAIC---VQKPLLEF 217 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~~~--~~~~~~-----------n~~g~~~ll~aa~~~--~v~~~V~~Ss~~---~~~~~~~y 217 (405)
. +.+|.|||+.+..+.+. .++.++ -......+.++++.. +-+.+|-+|=.+ +-...+..
T Consensus 79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvM 158 (259)
T COG0623 79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVM 158 (259)
T ss_pred HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchh
Confidence 4 78999999999765211 112222 112233344444432 123555554333 33455778
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAF 248 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v 248 (405)
+..|+..|.-++-++.+ ..|++++.|-.|.|
T Consensus 159 GvAKAaLEasvRyLA~dlG~~gIRVNaISAGPI 191 (259)
T COG0623 159 GVAKAALEASVRYLAADLGKEGIRVNAISAGPI 191 (259)
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEeeecccch
Confidence 89999999999988775 57999999987655
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.5e-07 Score=85.99 Aligned_cols=98 Identities=15% Similarity=0.263 Sum_probs=76.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|||+||||. |+.|++.|.++|++|++.++++.... .+... +...+..+..|.+.+.+.+++ +++|+|
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~-------~~~~~-g~~~v~~g~l~~~~l~~~l~~--~~i~~V 69 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKH-------LYPIH-QALTVHTGALDPQELREFLKR--HSIDIL 69 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccc-------ccccc-CCceEEECCCCHHHHHHHHHh--cCCCEE
Confidence 68999999999 99999999999999999999986542 22222 334455667788889888887 579999
Q ss_pred EEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEE
Q 043385 166 VSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204 (405)
Q Consensus 166 v~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~ 204 (405)
|+.+.+.. ...++|+.++|++.|+..+=|
T Consensus 70 IDAtHPfA----------~~is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 70 VDATHPFA----------AQITTNATAVCKELGIPYVRF 98 (256)
T ss_pred EEcCCHHH----------HHHHHHHHHHHHHhCCcEEEE
Confidence 99877542 356889999999999875444
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=7e-08 Score=86.95 Aligned_cols=82 Identities=20% Similarity=0.295 Sum_probs=56.4
Q ss_pred CCCeEEEEcCC----------------ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC
Q 043385 84 KDINILVVGST----------------GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147 (405)
Q Consensus 84 ~~~~vlVtGat----------------G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 147 (405)
.+++||||+|. ||+|++|+++|+++|++|+++++...... ........+..+.+|...
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~------~~~~~~~~~~~V~s~~d~ 75 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKP------NDINNQLELHPFEGIIDL 75 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCC------cccCCceeEEEEecHHHH
Confidence 57899999885 99999999999999999999986532111 001101133445664444
Q ss_pred HHHHHHHHHhhCCCccEEEEcccccC
Q 043385 148 LESLEKSLENLGTSIDVVVSCLASRS 173 (405)
Q Consensus 148 ~~~l~~~~~~~~~~~d~Vv~~a~~~~ 173 (405)
.+.+.++++. .++|+|||+|+...
T Consensus 76 ~~~l~~~~~~--~~~D~VIH~AAvsD 99 (229)
T PRK09620 76 QDKMKSIITH--EKVDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHHhcc--cCCCEEEECccccc
Confidence 4567777753 24899999999754
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.5e-07 Score=88.08 Aligned_cols=113 Identities=17% Similarity=0.162 Sum_probs=77.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-------CeEEEEecCCCC--cCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-------FNVIAIAREKSG--IRGRNDKEETLNQLQGASVCFSDVTNLESLEKSL 155 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~l~r~~~~--~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~ 155 (405)
..+|+||||+|+||++++..|+..+ .+|+++++++.. ..+... + +.+ ......+|+.+..++.+.+
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~--D-l~d--~~~~~~~~~~~~~~~~~~l 76 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVM--E-LQD--CAFPLLKSVVATTDPEEAF 76 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceee--e-hhh--ccccccCCceecCCHHHHh
Confidence 3589999999999999999999854 589999996532 211100 0 000 0001223554456677888
Q ss_pred HhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcC-CC-EEEEEc
Q 043385 156 ENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCG-AS-HFVLLS 206 (405)
Q Consensus 156 ~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~-v~-~~V~~S 206 (405)
++ +|+|||+||.... +..+.++.|+.-.+.+.+..+++. .+ .+|.+|
T Consensus 77 ~~----aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvs 128 (325)
T cd01336 77 KD----VDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVG 128 (325)
T ss_pred CC----CCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 88 9999999997643 335688999999999998888874 33 455555
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.5e-07 Score=81.96 Aligned_cols=92 Identities=20% Similarity=0.175 Sum_probs=56.8
Q ss_pred cCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC--HHHHHHHHHhhCCCccEEEEcc
Q 043385 92 GSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN--LESLEKSLENLGTSIDVVVSCL 169 (405)
Q Consensus 92 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~l~~~~~~~~~~~d~Vv~~a 169 (405)
.+||++|++|+++|+++|++|++++|..... .. ...+++++.++-.+ .+.+.+.+++ +|+|||||
T Consensus 23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~-~~~~v~~i~v~s~~~m~~~l~~~~~~----~DivIh~A 89 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PE-PHPNLSIIEIENVDDLLETLEPLVKD----HDVLIHSM 89 (229)
T ss_pred ccchHHHHHHHHHHHhCCCEEEEEECccccc--------CC-CCCCeEEEEEecHHHHHHHHHHHhcC----CCEEEeCC
Confidence 6789999999999999999999999764321 00 11356666654322 2344455554 99999999
Q ss_pred cccCCCCcc-hhHhHHHHHHHHHHHHHh
Q 043385 170 ASRSGGVKD-SWKIDYEANRNSLVAGRN 196 (405)
Q Consensus 170 ~~~~~~~~~-~~~~n~~g~~~ll~aa~~ 196 (405)
|........ .-..++..+.++.+.+++
T Consensus 90 Avsd~~~~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 90 AVSDYTPVYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred ccCCceehhhhhhhhhhhhhhhhhhhcc
Confidence 976421111 112234444555555543
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.50 E-value=4.6e-07 Score=88.85 Aligned_cols=92 Identities=28% Similarity=0.386 Sum_probs=66.9
Q ss_pred EEEEcCCChhHHHHHHHHHhCC-C-eEEEEecCCCCcCCCCchhHhhh--ccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 88 ILVVGSTGYIGKFVVEELVSRG-F-NVIAIAREKSGIRGRNDKEETLN--QLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g-~-~V~~l~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
|+|.|| |++|+.+++.|++++ + +|++.+|+.++.. .... ...+++.++.|+.|.+++.+++++ .|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~------~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~----~d 69 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAE------RLAEKLLGDRVEAVQVDVNDPESLAELLRG----CD 69 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHH------HHHT--TTTTEEEEE--TTTHHHHHHHHTT----SS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHH------HHHhhccccceeEEEEecCCHHHHHHHHhc----CC
Confidence 789999 999999999999996 4 8999999987642 1111 335899999999999999999998 89
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEE
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~ 204 (405)
+||||+++.. ...++++|.+.|+ ++|-
T Consensus 70 vVin~~gp~~-------------~~~v~~~~i~~g~-~yvD 96 (386)
T PF03435_consen 70 VVINCAGPFF-------------GEPVARACIEAGV-HYVD 96 (386)
T ss_dssp EEEE-SSGGG-------------HHHHHHHHHHHT--EEEE
T ss_pred EEEECCccch-------------hHHHHHHHHHhCC-Ceec
Confidence 9999998641 2345666666665 4444
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.46 E-value=8.3e-07 Score=86.48 Aligned_cols=80 Identities=16% Similarity=0.227 Sum_probs=63.5
Q ss_pred CCCCCCeEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcC
Q 043385 81 KNPKDINILVVGS----------------TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSD 144 (405)
Q Consensus 81 ~~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~D 144 (405)
.++++++|||||| +|.+|.+++++|.++|++|++++++.. .. ...+ +...|
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~----------~~~~--~~~~d 250 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP----------TPAG--VKRID 250 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc----------CCCC--cEEEc
Confidence 3468899999999 899999999999999999999998753 11 0112 34579
Q ss_pred CCCHHHHHHHHHhhCCCccEEEEcccccC
Q 043385 145 VTNLESLEKSLENLGTSIDVVVSCLASRS 173 (405)
Q Consensus 145 l~d~~~l~~~~~~~~~~~d~Vv~~a~~~~ 173 (405)
+++.+++.++++...+++|++|||||...
T Consensus 251 v~~~~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 251 VESAQEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred cCCHHHHHHHHHHhcCCCCEEEEcccccc
Confidence 99999888887654457999999999754
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.7e-06 Score=81.87 Aligned_cols=113 Identities=16% Similarity=0.135 Sum_probs=78.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHh-C--CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVS-R--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~-~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
|||+|+||+|.+|++++..|.. . ++++++++|++. ..+.. .+ +.+.+....+.+ .+.+++.+.+++ +
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~a--lD-l~~~~~~~~i~~--~~~~d~~~~l~~----~ 70 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVA--VD-LSHIPTAVKIKG--FSGEDPTPALEG----A 70 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-Cccee--hh-hhcCCCCceEEE--eCCCCHHHHcCC----C
Confidence 6899999999999999988855 2 468889998743 21111 01 112111223333 223345566677 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
|+||.++|.... ...+.+..|....+++++++++.+.+++|.+.|-
T Consensus 71 DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsN 119 (312)
T PRK05086 71 DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITN 119 (312)
T ss_pred CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 999999997543 2345788999999999999999999888877753
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.7e-07 Score=78.54 Aligned_cols=82 Identities=21% Similarity=0.290 Sum_probs=63.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+.++++++|+||+|.+|+.+++.|++.|++|++++|+.++.... .+.+....+..+..+|+.|.+++.+++++
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---- 97 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKA---ADSLRARFGEGVGAVETSDDAARAAAIKG---- 97 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---HHHHHhhcCCcEEEeeCCCHHHHHHHHhc----
Confidence 45678999999999999999999999999999999987554211 11122112456677899999999999988
Q ss_pred ccEEEEccc
Q 043385 162 IDVVVSCLA 170 (405)
Q Consensus 162 ~d~Vv~~a~ 170 (405)
+|+||++.+
T Consensus 98 ~diVi~at~ 106 (194)
T cd01078 98 ADVVFAAGA 106 (194)
T ss_pred CCEEEECCC
Confidence 999998654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.33 E-value=8.1e-07 Score=82.29 Aligned_cols=83 Identities=24% Similarity=0.502 Sum_probs=65.9
Q ss_pred eEEEEcCCChhHHHHHHHHHh----CCCeEEEEecCCCCcCCCCchhHhhh--ccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 87 NILVVGSTGYIGKFVVEELVS----RGFNVIAIAREKSGIRGRNDKEETLN--QLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~----~g~~V~~l~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
-++|.|||||.|..+++++++ .|..+-+..|+++++.+..+....-. .++...++.+|.+|++++.+..+.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~--- 83 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ--- 83 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence 589999999999999999999 67889999999988754333221111 123344888999999999999998
Q ss_pred CccEEEEcccccC
Q 043385 161 SIDVVVSCLASRS 173 (405)
Q Consensus 161 ~~d~Vv~~a~~~~ 173 (405)
+.+|+||+|+..
T Consensus 84 -~~vivN~vGPyR 95 (423)
T KOG2733|consen 84 -ARVIVNCVGPYR 95 (423)
T ss_pred -hEEEEeccccce
Confidence 999999999753
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.1e-06 Score=78.92 Aligned_cols=157 Identities=13% Similarity=0.135 Sum_probs=107.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCC--cCCCCchhHhhh-c-cCCcEEEEcCCCCHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-------NVIAIAREKSG--IRGRNDKEETLN-Q-LQGASVCFSDVTNLESLEK 153 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~--~~~~~~~~~~~~-~-~~~v~~~~~Dl~d~~~l~~ 153 (405)
.+||.|+|++|.||..++..|+..|. +++++++++.. +.+....+.... . ..++++. . . ..+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~--~----~~~ 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT-D--D----PNV 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe-c--C----cHH
Confidence 46899999999999999999998873 79999986543 333222222111 1 1122221 1 1 235
Q ss_pred HHHhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCC-C-EEEEEcccc------------ccCCChh
Q 043385 154 SLENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGA-S-HFVLLSAIC------------VQKPLLE 216 (405)
Q Consensus 154 ~~~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v-~-~~V~~Ss~~------------~~~~~~~ 216 (405)
.+++ +|+||.+||.... +..+.++.|+.-.+.+.+..++.+. . .+|.+|-.. .+.+...
T Consensus 75 ~~~d----aDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~V 150 (322)
T cd01338 75 AFKD----ADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNF 150 (322)
T ss_pred HhCC----CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHhe
Confidence 5666 9999999997532 3445788999999999999988773 4 455555321 1223445
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch
Q 043385 217 FQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~ 253 (405)
|+.++...+++-..+++ ..+++...+|..+|||+.+
T Consensus 151 iG~t~LDs~Rl~~~la~-~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 151 TAMTRLDHNRAKSQLAK-KAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred EEehHHHHHHHHHHHHH-HhCcChhHeEEEEEEeCCc
Confidence 77788888887777776 6789999999888999753
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=98.17 E-value=6.7e-06 Score=68.49 Aligned_cols=112 Identities=13% Similarity=0.192 Sum_probs=75.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
|||.|+||+|.+|++++..|...+ .+++++++++....+....+............... .+.+ .+++ +|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~~~----~~~~----aD 71 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GDYE----ALKD----AD 71 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SSGG----GGTT----ES
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-cccc----cccc----cc
Confidence 689999999999999999999987 58999999976554333322222222222222111 3333 3445 99
Q ss_pred EEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 164 VVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 164 ~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+||.++|.... ...+.++.|..-.+.+.+...+.+.+ .+|.+|
T Consensus 72 ivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 72 IVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp EEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred EEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 99999987532 34457789999999999999888754 445444
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.16 E-value=2e-05 Score=74.95 Aligned_cols=109 Identities=14% Similarity=0.153 Sum_probs=72.6
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC-------CeEEEEecCC--CCcCCCCchhHhhh--ccCCcEEEEcCCCCHHHHHHHH
Q 043385 87 NILVVGSTGYIGKFVVEELVSRG-------FNVIAIAREK--SGIRGRNDKEETLN--QLQGASVCFSDVTNLESLEKSL 155 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g-------~~V~~l~r~~--~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~ 155 (405)
+|.||||+|.||+.++..|+..| ++++++++++ +...+....+.... ...+++ +. ....+.+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~-i~------~~~~~~~ 74 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVV-IT------TDPEEAF 74 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcE-Ee------cChHHHh
Confidence 79999999999999999999865 2599999987 43322211111110 001111 11 2345677
Q ss_pred HhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcC-CC-EEEEEc
Q 043385 156 ENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCG-AS-HFVLLS 206 (405)
Q Consensus 156 ~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~-v~-~~V~~S 206 (405)
++ +|+|||+||.... +..+.+..|+.-.+.+.+..++.+ .+ .+|.+|
T Consensus 75 ~~----aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 75 KD----VDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred CC----CCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 77 9999999997542 334577889999999999998884 44 444444
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.3e-05 Score=72.26 Aligned_cols=97 Identities=26% Similarity=0.496 Sum_probs=71.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~d~ 164 (405)
|+++|.|+ |-+|..+|+.|.+.|++|++++++++... +.........++.+|-+|++.|+++ ++. +|+
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~------~~~~~~~~~~~v~gd~t~~~~L~~agi~~----aD~ 69 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVE------EFLADELDTHVVIGDATDEDVLEEAGIDD----ADA 69 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHH------HHhhhhcceEEEEecCCCHHHHHhcCCCc----CCE
Confidence 67889888 99999999999999999999999987642 1122224788999999999999987 555 999
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEE
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~ 204 (405)
++-..+.- .+|... ..-++++.|++++|-
T Consensus 70 vva~t~~d--------~~N~i~---~~la~~~~gv~~via 98 (225)
T COG0569 70 VVAATGND--------EVNSVL---ALLALKEFGVPRVIA 98 (225)
T ss_pred EEEeeCCC--------HHHHHH---HHHHHHhcCCCcEEE
Confidence 99655421 133332 222345578887764
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.10 E-value=6.5e-06 Score=74.33 Aligned_cols=71 Identities=20% Similarity=0.330 Sum_probs=51.0
Q ss_pred EEE-cCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh---CCCccE
Q 043385 89 LVV-GSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL---GTSIDV 164 (405)
Q Consensus 89 lVt-GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~---~~~~d~ 164 (405)
.|| .++|+||++++++|+++|++|+++++... . ...+ ...+|+.+.+++.+.++.+ .+++|+
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l----------~~~~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDi 83 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L----------KPEP---HPNLSIREIETTKDLLITLKELVQEHDI 83 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c----------cccc---CCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence 344 56899999999999999999999876321 1 0001 1347888888877765543 257999
Q ss_pred EEEcccccC
Q 043385 165 VVSCLASRS 173 (405)
Q Consensus 165 Vv~~a~~~~ 173 (405)
+|||||...
T Consensus 84 LVnnAgv~d 92 (227)
T TIGR02114 84 LIHSMAVSD 92 (227)
T ss_pred EEECCEecc
Confidence 999999643
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.1e-05 Score=73.69 Aligned_cols=102 Identities=10% Similarity=0.080 Sum_probs=72.1
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHH----------
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGF-------NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLE---------- 149 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---------- 149 (405)
+|.|+||+|.||..++..|...|. +++++++++... ..+....|+.|..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~ 66 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPT 66 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceecc
Confidence 589999999999999999998652 599999865431 1112223333332
Q ss_pred -HHHHHHHhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcC-CC-EEEEEc
Q 043385 150 -SLEKSLENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCG-AS-HFVLLS 206 (405)
Q Consensus 150 -~l~~~~~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~-v~-~~V~~S 206 (405)
...+.+++ +|+||++||.... ++.+..+.|+.-.+.+.+..++.+ .+ .+|.+|
T Consensus 67 ~~~~~~~~~----aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 67 HDPAVAFTD----VDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred CChHHHhCC----CCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 23466776 9999999997643 345678899999999999998874 44 455444
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=9.7e-06 Score=76.06 Aligned_cols=82 Identities=16% Similarity=0.242 Sum_probs=60.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCC---CCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREK---SGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~---~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
..++++++|+|| |++|++++..|++.|++ |++++|+. ++... ..+.+.. .+.+.+...|+.|.+.+.+.++
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~---l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~ 198 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQ---TAEKIKQEVPECIVNVYDLNDTEKLKAEIA 198 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHH---HHHHHhhcCCCceeEEechhhhhHHHhhhc
Confidence 356789999999 89999999999999985 99999986 33211 1111211 1345566789988888888887
Q ss_pred hhCCCccEEEEcccc
Q 043385 157 NLGTSIDVVVSCLAS 171 (405)
Q Consensus 157 ~~~~~~d~Vv~~a~~ 171 (405)
. +|+||||...
T Consensus 199 ~----~DilINaTp~ 209 (289)
T PRK12548 199 S----SDILVNATLV 209 (289)
T ss_pred c----CCEEEEeCCC
Confidence 7 8999998653
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.9e-05 Score=76.75 Aligned_cols=104 Identities=19% Similarity=0.251 Sum_probs=72.4
Q ss_pred CCCCCeEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCC
Q 043385 82 NPKDINILVVGS----------------TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145 (405)
Q Consensus 82 ~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl 145 (405)
++++++|||||| ||.+|.+++++|..+|++|+++.+..... ...++ ...|+
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-----------~~~~~--~~~~v 248 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-----------TPPGV--KSIKV 248 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-----------CCCCc--EEEEe
Confidence 478899999998 36799999999999999999998765421 01122 45789
Q ss_pred CCHHHH-HHHHHhhCCCccEEEEcccccCCCC-----------cchhHhHHHHHHHHHHHHHhcC
Q 043385 146 TNLESL-EKSLENLGTSIDVVVSCLASRSGGV-----------KDSWKIDYEANRNSLVAGRNCG 198 (405)
Q Consensus 146 ~d~~~l-~~~~~~~~~~~d~Vv~~a~~~~~~~-----------~~~~~~n~~g~~~ll~aa~~~~ 198 (405)
.+.+++ +.+++...+++|++|++||.....+ ...+.+|+..+..++...++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~ 313 (390)
T TIGR00521 249 STAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK 313 (390)
T ss_pred ccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence 988887 5555343346899999999754211 1123355566667777766543
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.1e-05 Score=76.69 Aligned_cols=74 Identities=27% Similarity=0.397 Sum_probs=54.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhC-C-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSR-G-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~-g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++++++|+||||+|+||+.++++|+++ | .+|+++.|+..+.. .+.. ++..+|+. ++.+++.+
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~-------~La~----el~~~~i~---~l~~~l~~-- 215 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQ-------ELQA----ELGGGKIL---SLEEALPE-- 215 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHH-------HHHH----HhccccHH---hHHHHHcc--
Confidence 578899999999999999999999865 5 68999999865432 1111 11124443 46677777
Q ss_pred CCccEEEEcccccC
Q 043385 160 TSIDVVVSCLASRS 173 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~ 173 (405)
+|+|||+++...
T Consensus 216 --aDiVv~~ts~~~ 227 (340)
T PRK14982 216 --ADIVVWVASMPK 227 (340)
T ss_pred --CCEEEECCcCCc
Confidence 999999988643
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00076 Score=55.97 Aligned_cols=140 Identities=19% Similarity=0.270 Sum_probs=84.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCC--C-HHH----HHHHHHhh
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT--N-LES----LEKSLENL 158 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--d-~~~----l~~~~~~~ 158 (405)
.+|+|-||-|-+|+++++.+.+++|-|.-++..+.... ..-.++.+|-. + .++ +.+.+++
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~A------------d~sI~V~~~~swtEQe~~v~~~vg~sL~g- 70 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA------------DSSILVDGNKSWTEQEQSVLEQVGSSLQG- 70 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc------------cceEEecCCcchhHHHHHHHHHHHHhhcc-
Confidence 58999999999999999999999999988887654321 11123333332 1 222 2233444
Q ss_pred CCCccEEEEcccccCCCCc---c-------hhHhHHHH-HHHHHHHHHhcCCCEEEEEcccccc----CCChhHHHHHHH
Q 043385 159 GTSIDVVVSCLASRSGGVK---D-------SWKIDYEA-NRNSLVAGRNCGASHFVLLSAICVQ----KPLLEFQRAKLK 223 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~~~~---~-------~~~~n~~g-~~~ll~aa~~~~v~~~V~~Ss~~~~----~~~~~y~~sK~~ 223 (405)
+++|.||+.||...+... + +|+.-+-. +...--+......+-++.+.....- ...-.|+..|.+
T Consensus 71 -ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaA 149 (236)
T KOG4022|consen 71 -EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAA 149 (236)
T ss_pred -cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHH
Confidence 689999999886543211 1 22222211 1111111222233345555544332 334679999999
Q ss_pred HHHHHHHHhhhcCCce
Q 043385 224 FEAEMMKVAEEDSGFT 239 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~ 239 (405)
+.++.+.++.+++|++
T Consensus 150 VHqLt~SLaak~SGlP 165 (236)
T KOG4022|consen 150 VHQLTSSLAAKDSGLP 165 (236)
T ss_pred HHHHHHHhcccccCCC
Confidence 9999999988767765
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.91 E-value=4.1e-05 Score=74.34 Aligned_cols=107 Identities=21% Similarity=0.347 Sum_probs=70.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~ 161 (405)
++++|.|.||||++|+.+++.|.++ +++|+.++++..... .+.. .......+|+.+.+.++.. +++
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~-------~i~~-~~~~l~~~~~~~~~~~~~~~~~~---- 104 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQ-------SFGS-VFPHLITQDLPNLVAVKDADFSD---- 104 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCC-------Cchh-hCccccCccccceecCCHHHhcC----
Confidence 4579999999999999999999998 579999988654321 1110 0112222444433333332 555
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhH
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEF 217 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y 217 (405)
+|+||.+++. ....++++++ +.| .++|-+|+..-..+...|
T Consensus 105 ~DvVf~Alp~-------------~~s~~i~~~~-~~g-~~VIDlSs~fRl~~~~~y 145 (381)
T PLN02968 105 VDAVFCCLPH-------------GTTQEIIKAL-PKD-LKIVDLSADFRLRDIAEY 145 (381)
T ss_pred CCEEEEcCCH-------------HHHHHHHHHH-hCC-CEEEEcCchhccCCcccc
Confidence 9999986652 2566677776 455 589999998877665444
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.85 E-value=3e-05 Score=71.58 Aligned_cols=77 Identities=23% Similarity=0.417 Sum_probs=60.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
..++|-|||||.|..++++|.++|.+-.+..|+..++. .+...-+.+.-..++.+++.+++.+.+ .++|
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~-------~l~~~LG~~~~~~p~~~p~~~~~~~~~----~~VV 75 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLD-------ALRASLGPEAAVFPLGVPAALEAMASR----TQVV 75 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHH-------HHHHhcCccccccCCCCHHHHHHHHhc----ceEE
Confidence 46899999999999999999999988888888876652 222211344444566668889998887 9999
Q ss_pred EEcccccC
Q 043385 166 VSCLASRS 173 (405)
Q Consensus 166 v~~a~~~~ 173 (405)
+||+|+..
T Consensus 76 lncvGPyt 83 (382)
T COG3268 76 LNCVGPYT 83 (382)
T ss_pred Eecccccc
Confidence 99999754
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00017 Score=69.23 Aligned_cols=94 Identities=21% Similarity=0.359 Sum_probs=62.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF---NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+++|+|.||||++|+.+++.|.+++| +++++++...... .+. ..+.+....|+.+. .+++
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~-------~l~-~~g~~i~v~d~~~~-----~~~~---- 63 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGK-------ELS-FKGKELKVEDLTTF-----DFSG---- 63 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCC-------eee-eCCceeEEeeCCHH-----HHcC----
Confidence 46899999999999999999999876 4578877654321 111 12345555566542 2345
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+||.+++.. .++.+++...++|. .+|=.|+..
T Consensus 64 vDvVf~A~g~g-------------~s~~~~~~~~~~G~-~VIDlS~~~ 97 (334)
T PRK14874 64 VDIALFSAGGS-------------VSKKYAPKAAAAGA-VVIDNSSAF 97 (334)
T ss_pred CCEEEECCChH-------------HHHHHHHHHHhCCC-EEEECCchh
Confidence 99999877632 34556666666776 566666654
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00015 Score=69.48 Aligned_cols=110 Identities=20% Similarity=0.323 Sum_probs=72.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCC---------------------chhHhhhccCCcEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRN---------------------DKEETLNQLQGASV 140 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~---------------------~~~~~~~~~~~v~~ 140 (405)
++..+|+|.|+ |++|+.+++.|++.|. +|++++++.-...... +.+..+...-.++.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 45678999999 9999999999999996 8999998742211110 01111111124556
Q ss_pred EEcCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 141 CFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 141 ~~~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
+..|++. +.+.+.+++ +|+||.+.. |...-..+-++|.+.++ .+|+.+..+.+
T Consensus 101 ~~~~~~~-~~~~~~~~~----~DlVid~~D------------n~~~r~~ln~~~~~~~i-P~i~~~~~g~~ 153 (339)
T PRK07688 101 IVQDVTA-EELEELVTG----VDLIIDATD------------NFETRFIVNDAAQKYGI-PWIYGACVGSY 153 (339)
T ss_pred EeccCCH-HHHHHHHcC----CCEEEEcCC------------CHHHHHHHHHHHHHhCC-CEEEEeeeeee
Confidence 6667653 556777777 999998743 34444456678888886 57777766544
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00018 Score=68.84 Aligned_cols=110 Identities=16% Similarity=0.277 Sum_probs=71.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCc---------------------hhHhhhccCCcEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRND---------------------KEETLNQLQGASV 140 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~---------------------~~~~~~~~~~v~~ 140 (405)
++.++|+|.|+ |.+|+++++.|++.|. ++++++++.-......+ .+..+...-.++.
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 45678999998 8899999999999996 79999987522211111 1111112224556
Q ss_pred EEcCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 141 CFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 141 ~~~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
+..|++ .+.+.+++++ +|+||.+.. |...-..+-++|.+.+++ +|+.+..+.+
T Consensus 101 ~~~~~~-~~~~~~~~~~----~DlVid~~D------------~~~~r~~in~~~~~~~ip-~i~~~~~g~~ 153 (338)
T PRK12475 101 VVTDVT-VEELEELVKE----VDLIIDATD------------NFDTRLLINDLSQKYNIP-WIYGGCVGSY 153 (338)
T ss_pred EeccCC-HHHHHHHhcC----CCEEEEcCC------------CHHHHHHHHHHHHHcCCC-EEEEEecccE
Confidence 667775 4567777877 999998753 222223355678888874 7777655543
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00041 Score=65.89 Aligned_cols=112 Identities=15% Similarity=0.198 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhcc-CCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQL-QGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..++||.|+|+ |.+|..++..|+..|. ++++++++++.+.+....+...... .++.+..+ +. +.+++
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~~----~~~~~-- 73 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---DY----SDCKD-- 73 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---CH----HHhCC--
Confidence 35679999998 9999999999999985 7999999887664433332222211 23333322 22 33566
Q ss_pred CCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 160 TSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.+||.... +..+..+.|..-.+.+++.+++.+.+ .+|.+|
T Consensus 74 --adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 74 --ADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred --CCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 9999999997532 34457788999999999999887755 444444
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00019 Score=62.36 Aligned_cols=69 Identities=26% Similarity=0.338 Sum_probs=42.1
Q ss_pred cCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEEEcccc
Q 043385 92 GSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLAS 171 (405)
Q Consensus 92 GatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~ 171 (405)
-.||..|.+|++++..+|++|+.+..... . ...++++.+. +...+++.+++.......|++||+|+.
T Consensus 26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~----------~~p~~~~~i~--v~sa~em~~~~~~~~~~~Di~I~aAAV 92 (185)
T PF04127_consen 26 RSSGKMGAALAEEAARRGAEVTLIHGPSS-L----------PPPPGVKVIR--VESAEEMLEAVKELLPSADIIIMAAAV 92 (185)
T ss_dssp S--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE---SSHHHHHHHHHHHGGGGSEEEE-SB-
T ss_pred CCcCHHHHHHHHHHHHCCCEEEEEecCcc-c----------cccccceEEE--ecchhhhhhhhccccCcceeEEEecch
Confidence 34899999999999999999999998742 1 1123676666 445555554444322338999999997
Q ss_pred cC
Q 043385 172 RS 173 (405)
Q Consensus 172 ~~ 173 (405)
..
T Consensus 93 sD 94 (185)
T PF04127_consen 93 SD 94 (185)
T ss_dssp -S
T ss_pred hh
Confidence 64
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00011 Score=79.26 Aligned_cols=77 Identities=31% Similarity=0.410 Sum_probs=60.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-Ce-------------EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHH
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FN-------------VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLE 149 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~-------------V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~ 149 (405)
.+++|+|.|| |++|+.+++.|.+.+ ++ |.+.+++.+... ......++++.+..|+.|.+
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~------~la~~~~~~~~v~lDv~D~e 640 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAK------ETVEGIENAEAVQLDVSDSE 640 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHH------HHHHhcCCCceEEeecCCHH
Confidence 4678999998 999999999998763 33 777777765431 11222347888999999999
Q ss_pred HHHHHHHhhCCCccEEEEcccc
Q 043385 150 SLEKSLENLGTSIDVVVSCLAS 171 (405)
Q Consensus 150 ~l~~~~~~~~~~~d~Vv~~a~~ 171 (405)
++.+++++ +|+||++...
T Consensus 641 ~L~~~v~~----~DaVIsalP~ 658 (1042)
T PLN02819 641 SLLKYVSQ----VDVVISLLPA 658 (1042)
T ss_pred HHHHhhcC----CCEEEECCCc
Confidence 99999887 9999998765
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00015 Score=72.67 Aligned_cols=73 Identities=18% Similarity=0.372 Sum_probs=59.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~d~ 164 (405)
|+|+|+|+ |.+|+++++.|.++|++|++++++++.. +.+....+++++.||.++.+.+.++ +++ +|.
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~-------~~~~~~~~~~~~~gd~~~~~~l~~~~~~~----a~~ 68 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERL-------RRLQDRLDVRTVVGNGSSPDVLREAGAED----ADL 68 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHH-------HHHHhhcCEEEEEeCCCCHHHHHHcCCCc----CCE
Confidence 58999998 9999999999999999999999987653 2222223689999999999988887 665 999
Q ss_pred EEEccc
Q 043385 165 VVSCLA 170 (405)
Q Consensus 165 Vv~~a~ 170 (405)
||-+..
T Consensus 69 vi~~~~ 74 (453)
T PRK09496 69 LIAVTD 74 (453)
T ss_pred EEEecC
Confidence 997654
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0004 Score=65.84 Aligned_cols=112 Identities=14% Similarity=0.199 Sum_probs=72.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCC--CCcCCCCchhHh-hhccC-CcEEEEcCCCCHHHHHHHHHhhC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF--NVIAIAREK--SGIRGRNDKEET-LNQLQ-GASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~--~~~~~~~~~~~~-~~~~~-~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
|+|.|+|+||.+|..++..|+..|+ +|++++|++ +++.+....+.. +...+ ...+... .| . +.+++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~--~d---~-~~l~~-- 72 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKIS--SD---L-SDVAG-- 72 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEEC--CC---H-HHhCC--
Confidence 6899999999999999999999985 599999954 333222211111 11111 1111111 12 2 23666
Q ss_pred CCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEcc
Q 043385 160 TSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSA 207 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss 207 (405)
+|+||-++|.... +..+..+.|+.-.+.+++.+.+.+.+ .+|.+++
T Consensus 73 --aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 73 --SDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred --CCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 9999999986542 22456788999999999888777544 5665664
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00046 Score=55.84 Aligned_cols=106 Identities=21% Similarity=0.333 Sum_probs=60.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCC-CcCCCCchhHhhhccCCc-EEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 87 NILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKS-GIRGRNDKEETLNQLQGA-SVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~-~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
||.|+||||++|+.+++.|.+.- ++++.+..+.. ...... .......+. ....-| .+.+.+ ++ +|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~-~~~~~~----~~----~D 68 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLS---EVFPHPKGFEDLSVED-ADPEEL----SD----VD 68 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHH---HTTGGGTTTEEEBEEE-TSGHHH----TT----ES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeee---hhccccccccceeEee-cchhHh----hc----CC
Confidence 68999999999999999999964 56555444433 221110 111111112 111122 333333 55 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHH
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQ 218 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~ 218 (405)
+||.|.+. .....+.+.+.+.|+ ++|=.|+..-..+..+|+
T Consensus 69 vvf~a~~~-------------~~~~~~~~~~~~~g~-~ViD~s~~~R~~~~~~~~ 109 (121)
T PF01118_consen 69 VVFLALPH-------------GASKELAPKLLKAGI-KVIDLSGDFRLDDDVPYG 109 (121)
T ss_dssp EEEE-SCH-------------HHHHHHHHHHHHTTS-EEEESSSTTTTSTTSEEE
T ss_pred EEEecCch-------------hHHHHHHHHHhhCCc-EEEeCCHHHhCCCCCCEE
Confidence 99997652 335667777778887 677666665444444444
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00076 Score=61.51 Aligned_cols=97 Identities=20% Similarity=0.240 Sum_probs=76.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+++|||.|||+ =|+.|++.|.++|++|++.+-.+... .. ..++.++.|-+.|.+.+.+.+++ ++++.
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~---------~~-~~~~~v~~G~l~~~~~l~~~l~~--~~i~~ 68 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG---------PA-DLPGPVRVGGFGGAEGLAAYLRE--EGIDL 68 (248)
T ss_pred CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC---------cc-cCCceEEECCCCCHHHHHHHHHH--CCCCE
Confidence 57899999977 79999999999999888777665432 11 23678888999899999999987 67999
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEE
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~ 204 (405)
||+...+.. ..-++++.++|++.|+..+=|
T Consensus 69 VIDATHPfA----------~~is~~a~~ac~~~~ipyiR~ 98 (248)
T PRK08057 69 VIDATHPYA----------AQISANAAAACRALGIPYLRL 98 (248)
T ss_pred EEECCCccH----------HHHHHHHHHHHHHhCCcEEEE
Confidence 999766542 345889999999999875444
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.68 E-value=5.7e-05 Score=62.44 Aligned_cols=77 Identities=21% Similarity=0.318 Sum_probs=53.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+.++++|+|.|+ |+.|+.++..|.+.|.+ |+++.|+.++.... .+.+ ....+.++ ++. ++.+.+..
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l---~~~~-~~~~~~~~--~~~---~~~~~~~~--- 75 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEAL---AEEF-GGVNIEAI--PLE---DLEEALQE--- 75 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHH---HHHH-TGCSEEEE--EGG---GHCHHHHT---
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHH---HHHc-Ccccccee--eHH---HHHHHHhh---
Confidence 467899999998 99999999999999975 99999997764211 1111 11233443 333 34466776
Q ss_pred CccEEEEccccc
Q 043385 161 SIDVVVSCLASR 172 (405)
Q Consensus 161 ~~d~Vv~~a~~~ 172 (405)
+|+||++.+..
T Consensus 76 -~DivI~aT~~~ 86 (135)
T PF01488_consen 76 -ADIVINATPSG 86 (135)
T ss_dssp -ESEEEE-SSTT
T ss_pred -CCeEEEecCCC
Confidence 99999987654
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00022 Score=71.40 Aligned_cols=78 Identities=23% Similarity=0.272 Sum_probs=56.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++++|+|+|+++ +|..+++.|+++|++|++.++..... .......+.. .++.++.+|..| +...+ +
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~--~~~~~~~l~~-~~~~~~~~~~~~-----~~~~~----~ 69 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQ--LKEALEELGE-LGIELVLGEYPE-----EFLEG----V 69 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHH--HHHHHHHHHh-cCCEEEeCCcch-----hHhhc----C
Confidence 5678999999966 99999999999999999999875321 1111122222 267888888876 22344 9
Q ss_pred cEEEEcccccC
Q 043385 163 DVVVSCLASRS 173 (405)
Q Consensus 163 d~Vv~~a~~~~ 173 (405)
|+||+++|...
T Consensus 70 d~vv~~~g~~~ 80 (450)
T PRK14106 70 DLVVVSPGVPL 80 (450)
T ss_pred CEEEECCCCCC
Confidence 99999988643
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00036 Score=61.90 Aligned_cols=108 Identities=18% Similarity=0.278 Sum_probs=66.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCc-------------------hhHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRND-------------------KEETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~-------------------~~~~~~~~~~v~~~~ 142 (405)
+...+|+|.|+ |.+|+++++.|+..|. ++++++.+.-......+ .+..+...-.++.+.
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 45678999997 9999999999999995 89999987422211111 111111111233344
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
.++. .+.+.+.+++ +|+||.+.. |...-..+-+.|++.++ .+|+.+..+
T Consensus 98 ~~i~-~~~~~~~~~~----~D~Vi~~~d------------~~~~r~~l~~~~~~~~i-p~i~~~~~g 146 (202)
T TIGR02356 98 ERVT-AENLELLINN----VDLVLDCTD------------NFATRYLINDACVALGT-PLISAAVVG 146 (202)
T ss_pred hcCC-HHHHHHHHhC----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 4443 3456677776 899998653 23333345667787776 477666443
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00061 Score=64.29 Aligned_cols=111 Identities=21% Similarity=0.157 Sum_probs=74.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
|||.|+|++|.+|++++-.|+..| .++++++++ +..+....+.... ....+.... ..+++.+.+++ +|
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~--~~~~i~~~~--~~~~~y~~~~d----aD 70 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN--TPAKVTGYL--GPEELKKALKG----AD 70 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC--CcceEEEec--CCCchHHhcCC----CC
Confidence 589999999999999999999888 579999987 3332222111111 112222110 11224566777 99
Q ss_pred EEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 164 VVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 164 ~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+||-+||... ....+..+.|..-.+.+++..++.+.+ .+|.+|
T Consensus 71 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvt 117 (310)
T cd01337 71 VVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIIS 117 (310)
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 9999999753 234457889999999999999888754 455555
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00059 Score=64.69 Aligned_cols=109 Identities=15% Similarity=0.200 Sum_probs=74.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhcc--CCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQL--QGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++|.|.|+ |.+|+.++..|+..| ++|++++|++++..+....+...... ....... .+.+ .+++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~----~l~~---- 68 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS----DCKD---- 68 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH----HhCC----
Confidence 37999997 999999999999998 68999999887765433332222111 1222222 2222 3455
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||+++|.... +..+..+.|..-.+.+.+.+++.+.+ .+|.+|
T Consensus 69 aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs 117 (306)
T cd05291 69 ADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS 117 (306)
T ss_pred CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 9999999987532 33457788999999999999888754 455555
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0013 Score=61.49 Aligned_cols=111 Identities=16% Similarity=0.167 Sum_probs=75.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCC-cEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQG-ASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~-v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+||.|+|| |+||+.++-.|+.++ .+++++++.++...+....+........ -..+.+| .| -+.+++ .
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~----a 70 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKG----A 70 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcC----C
Confidence 58999999 999999999998876 4899999996665543332222221111 1222333 22 344566 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
|+|+-.||.... ...+.++.|..-.+.+.+...+.+.+-+|.+-
T Consensus 71 DiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVv 117 (313)
T COG0039 71 DIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVV 117 (313)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence 999999986532 45568899999999999998888765454443
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00073 Score=55.79 Aligned_cols=106 Identities=19% Similarity=0.291 Sum_probs=68.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCc------------h-------hHhhhccCCcEEEEcC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRND------------K-------EETLNQLQGASVCFSD 144 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~------------~-------~~~~~~~~~v~~~~~D 144 (405)
.++|+|.|+ |.+|+.+++.|+..|. ++++++.+.-......+ + +......-+++.+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 368999999 9999999999999996 79999875422211111 0 0011111245555566
Q ss_pred CCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 145 VTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 145 l~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+ +.+.+.+.+++ +|+||.+.. |......+-+.|++.+. .+|+.+..+
T Consensus 81 ~-~~~~~~~~~~~----~d~vi~~~d------------~~~~~~~l~~~~~~~~~-p~i~~~~~g 127 (135)
T PF00899_consen 81 I-DEENIEELLKD----YDIVIDCVD------------SLAARLLLNEICREYGI-PFIDAGVNG 127 (135)
T ss_dssp C-SHHHHHHHHHT----SSEEEEESS------------SHHHHHHHHHHHHHTT--EEEEEEEET
T ss_pred c-ccccccccccC----CCEEEEecC------------CHHHHHHHHHHHHHcCC-CEEEEEeec
Confidence 6 45667888877 999998754 23444557778888886 677776554
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00078 Score=64.82 Aligned_cols=103 Identities=19% Similarity=0.164 Sum_probs=62.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEE-EcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVC-FSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++|+|.||||++|+.+++.|.+. +++++++.++.+..... .. ..+++..+ ..++.+.+.. .+++ +
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l----~~--~~~~~~~~~~~~~~~~~~~--~~~~----v 69 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPL----SD--VHPHLRGLVDLVLEPLDPE--ILAG----A 69 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcch----HH--hCcccccccCceeecCCHH--HhcC----C
Confidence 479999999999999999999987 57887777643221100 00 01111111 1233333322 3445 9
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP 213 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~ 213 (405)
|+||.|.+. .....++..+.++|+ ++|=.|+..-..+
T Consensus 70 D~Vf~alP~-------------~~~~~~v~~a~~aG~-~VID~S~~fR~~~ 106 (343)
T PRK00436 70 DVVFLALPH-------------GVSMDLAPQLLEAGV-KVIDLSADFRLKD 106 (343)
T ss_pred CEEEECCCc-------------HHHHHHHHHHHhCCC-EEEECCcccCCCC
Confidence 999987652 234556666766674 7888887765544
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00087 Score=54.45 Aligned_cols=94 Identities=27% Similarity=0.449 Sum_probs=57.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHh-CCCeEE-EEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 86 INILVVGSTGYIGKFVVEELVS-RGFNVI-AIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~-~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
|+|.|.|++|.+|+.+++.+.+ .++++. +++|+++...+. +. ..+. +.. ...+.-.++++++++. +|
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~-d~-g~~~---~~~--~~~~~v~~~l~~~~~~----~D 69 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGK-DV-GELA---GIG--PLGVPVTDDLEELLEE----AD 69 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTS-BC-HHHC---TSS--T-SSBEBS-HHHHTTH-----S
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccc-hh-hhhh---CcC--CcccccchhHHHhccc----CC
Confidence 5899999999999999999999 578855 455655322111 00 1111 111 0111112557788877 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEE
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V 203 (405)
+||+.. +...+...++.|.++|+.-++
T Consensus 70 VvIDfT-------------~p~~~~~~~~~~~~~g~~~Vi 96 (124)
T PF01113_consen 70 VVIDFT-------------NPDAVYDNLEYALKHGVPLVI 96 (124)
T ss_dssp EEEEES--------------HHHHHHHHHHHHHHT-EEEE
T ss_pred EEEEcC-------------ChHHhHHHHHHHHhCCCCEEE
Confidence 999964 345677788889888874333
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0008 Score=67.43 Aligned_cols=102 Identities=23% Similarity=0.334 Sum_probs=72.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
..+++|+|.|+ |.+|+.+++.|.+.|++|++++++++.. +.+. ...++.++.||.+|++.+.++--. +
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~-------~~~~~~~~~~~~i~gd~~~~~~L~~~~~~---~ 297 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERA-------EELAEELPNTLVLHGDGTDQELLEEEGID---E 297 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-------HHHHHHCCCCeEEECCCCCHHHHHhcCCc---c
Confidence 44688999999 9999999999999999999999987643 2222 224688999999999988654322 4
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
+|+||-+.... +.|... ...+++.+.+++|....
T Consensus 298 a~~vi~~~~~~--------~~n~~~----~~~~~~~~~~~ii~~~~ 331 (453)
T PRK09496 298 ADAFIALTNDD--------EANILS----SLLAKRLGAKKVIALVN 331 (453)
T ss_pred CCEEEECCCCc--------HHHHHH----HHHHHHhCCCeEEEEEC
Confidence 89998654321 245442 23456667777665543
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0013 Score=52.46 Aligned_cols=71 Identities=31% Similarity=0.546 Sum_probs=54.2
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEEE
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVS 167 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv~ 167 (405)
|+|.|. |-+|..+++.|.+.+.+|++++++++.. +.+.. .++.++.||.+|++.++++=-. +++.||-
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~-------~~~~~-~~~~~i~gd~~~~~~l~~a~i~---~a~~vv~ 68 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERV-------EELRE-EGVEVIYGDATDPEVLERAGIE---KADAVVI 68 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHH-------HHHHH-TTSEEEES-TTSHHHHHHTTGG---CESEEEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHH-------HHHHh-cccccccccchhhhHHhhcCcc---ccCEEEE
Confidence 578888 7999999999999777999999997653 23333 3689999999999998876322 4899987
Q ss_pred ccc
Q 043385 168 CLA 170 (405)
Q Consensus 168 ~a~ 170 (405)
+..
T Consensus 69 ~~~ 71 (116)
T PF02254_consen 69 LTD 71 (116)
T ss_dssp ESS
T ss_pred ccC
Confidence 544
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0017 Score=59.30 Aligned_cols=98 Identities=29% Similarity=0.400 Sum_probs=73.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
|+|||.|||+ =|+.|++.|.++|+ |.+-+-..-.. ... ...+.+.++.|-+.|.+.+.+.++. ++++.
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~-------~~~~~~~~~~~v~~G~lg~~~~l~~~l~~--~~i~~ 69 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGG-------ELLKPELPGLEVRVGRLGDEEGLAEFLRE--NGIDA 69 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhH-------hhhccccCCceEEECCCCCHHHHHHHHHh--CCCcE
Confidence 7899999977 69999999999998 55544433221 112 1224678889999899999999987 67999
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEE
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~ 204 (405)
||+...+.. ..-++|+.++|++.|+..+=|
T Consensus 70 vIDATHPfA----------~~is~na~~a~~~~~ipylR~ 99 (249)
T PF02571_consen 70 VIDATHPFA----------AEISQNAIEACRELGIPYLRF 99 (249)
T ss_pred EEECCCchH----------HHHHHHHHHHHhhcCcceEEE
Confidence 999766542 345889999999999874443
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0023 Score=56.53 Aligned_cols=111 Identities=15% Similarity=0.223 Sum_probs=69.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCch---------------------hHhhhccCCcEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDK---------------------EETLNQLQGASV 140 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~---------------------~~~~~~~~~v~~ 140 (405)
.+..+|+|.|++| +|.++++.|+..| .++++++.+.-......+. +..+...-+++.
T Consensus 17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~ 95 (198)
T cd01485 17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI 95 (198)
T ss_pred HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence 4457899999955 9999999999999 4699998764321111110 111222224455
Q ss_pred EEcCCCC-HHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 141 CFSDVTN-LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 141 ~~~Dl~d-~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
+..++.+ .+...+.++. +|+||.+.. +......+-+.|++.++ .+|+.++.+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~----~dvVi~~~d------------~~~~~~~ln~~c~~~~i-p~i~~~~~G~~ 150 (198)
T cd01485 96 VEEDSLSNDSNIEEYLQK----FTLVIATEE------------NYERTAKVNDVCRKHHI-PFISCATYGLI 150 (198)
T ss_pred EecccccchhhHHHHHhC----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEEeecCE
Confidence 5555542 3445666766 899997632 23334456678888887 57777766554
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0015 Score=53.34 Aligned_cols=92 Identities=20% Similarity=0.267 Sum_probs=68.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++++|++.|. | -|.+++..|.+.|++|++++.++... +.... ..+.++.+|+.+++. +.-++ +|
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV-------~~a~~-~~~~~v~dDlf~p~~--~~y~~----a~ 79 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAV-------EKAKK-LGLNAFVDDLFNPNL--EIYKN----AK 79 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHH-------HHHHH-hCCeEEECcCCCCCH--HHHhc----CC
Confidence 4578999998 5 89999999999999999999998743 22222 368999999998862 33445 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEE
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V 203 (405)
.|+.+=.+ .+-...+++.|++.++.-+|
T Consensus 80 liysirpp------------~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 80 LIYSIRPP------------RDLQPFILELAKKINVPLII 107 (134)
T ss_pred EEEEeCCC------------HHHHHHHHHHHHHcCCCEEE
Confidence 99965321 24466789999998876544
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0011 Score=62.95 Aligned_cols=111 Identities=14% Similarity=0.142 Sum_probs=73.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCC--CcCCCCchhHhhh--ccCCcEEEEcCCCCHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-------NVIAIAREKS--GIRGRNDKEETLN--QLQGASVCFSDVTNLESLEK 153 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~l~r~~~--~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~ 153 (405)
..||.|+||+|++|++++..|+..|. +++++++++. +..+....+.... ...++.+. + ...+
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~------~~~~ 75 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-T------DPEE 75 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-c------ChHH
Confidence 46899999999999999999998873 7999998653 2332222111111 01122211 1 1234
Q ss_pred HHHhhCCCccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCC-C-EEEEEc
Q 043385 154 SLENLGTSIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGA-S-HFVLLS 206 (405)
Q Consensus 154 ~~~~~~~~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v-~-~~V~~S 206 (405)
.+++ +|+||.+||... .+..+.+..|+.-.+.+++.+++.+. + .+|.+|
T Consensus 76 ~~~d----aDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 76 AFKD----VDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred HhCC----CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 5666 999999999753 23445788999999999999998865 4 444444
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0012 Score=62.40 Aligned_cols=110 Identities=18% Similarity=0.155 Sum_probs=73.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
||.|+|++|.||.+++-.|+..+. +++++++++ ..+....+.. ......+.... +.+++.+.+++ +|+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~--~~~~~~i~~~~--~~~~~~~~~~d----aDi 70 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSH--IPTAASVKGFS--GEEGLENALKG----ADV 70 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhc--CCcCceEEEec--CCCchHHHcCC----CCE
Confidence 589999999999999999988874 799999877 2222111111 11112222111 11224567777 999
Q ss_pred EEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 165 VVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 165 Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
||-+||... .+..+....|+.-.+.+.+...+.+.+ .+|.+|
T Consensus 71 vvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs 116 (312)
T TIGR01772 71 VVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT 116 (312)
T ss_pred EEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence 999999753 234457888999999999998888755 344444
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0011 Score=60.12 Aligned_cols=106 Identities=18% Similarity=0.229 Sum_probs=64.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCc-------------------hhHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRND-------------------KEETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~-------------------~~~~~~~~~~v~~~~ 142 (405)
++..+|+|.|+ |.+|+++++.|+..|. +++++|.+.-......+ .+..+...-+++.+.
T Consensus 19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 45679999997 9999999999999995 78888765422211111 001111111344455
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
.++ +.+.+.+.+++ +|+||.+... ...-..+-++|.+.++ .+|+.+.
T Consensus 98 ~~i-~~~~~~~~~~~----~DvVi~~~d~------------~~~r~~l~~~~~~~~i-p~i~~g~ 144 (228)
T cd00757 98 ERL-DAENAEELIAG----YDLVLDCTDN------------FATRYLINDACVKLGK-PLVSGAV 144 (228)
T ss_pred cee-CHHHHHHHHhC----CCEEEEcCCC------------HHHHHHHHHHHHHcCC-CEEEEEe
Confidence 455 34556677776 8999986542 2233446667777775 4666553
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0013 Score=58.66 Aligned_cols=110 Identities=15% Similarity=0.247 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC---CCcCCC---------------CchhHhhhccCCcEEEEc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREK---SGIRGR---------------NDKEETLNQLQGASVCFS 143 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~---~~~~~~---------------~~~~~~~~~~~~v~~~~~ 143 (405)
++..+|+|.|+ |.+|+.+++.|+..|. ++++++.+. +.+..+ .+.+..+...-+++.+..
T Consensus 26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~ 104 (212)
T PRK08644 26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE 104 (212)
T ss_pred HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence 45678999998 9999999999999995 699999873 222111 000011111123444555
Q ss_pred CCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccccc
Q 043385 144 DVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQ 211 (405)
Q Consensus 144 Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~ 211 (405)
.+++ +.+.+.+++ +|+||.+.- |...-..+.+.|.+. ++ .+|+.+..+.+
T Consensus 105 ~i~~-~~~~~~~~~----~DvVI~a~D------------~~~~r~~l~~~~~~~~~~-p~I~~~~~~~~ 155 (212)
T PRK08644 105 KIDE-DNIEELFKD----CDIVVEAFD------------NAETKAMLVETVLEHPGK-KLVAASGMAGY 155 (212)
T ss_pred ecCH-HHHHHHHcC----CCEEEECCC------------CHHHHHHHHHHHHHhCCC-CEEEeehhhcc
Confidence 5544 446667776 899998632 334444566777777 65 57766544433
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0011 Score=63.86 Aligned_cols=105 Identities=19% Similarity=0.172 Sum_probs=61.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEE-ecCCCCcCCCCchhHhhhccCCcEEE-EcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSR-GFNVIAI-AREKSGIRGRNDKEETLNQLQGASVC-FSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
++|.|.||||++|+.+++.|.+. +++++.+ +++....... .... +.+... ..++.+. +..+.+++ +
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~---~~~~---~~l~~~~~~~~~~~-~~~~~~~~----~ 69 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPV---SEVH---PHLRGLVDLNLEPI-DEEEIAED----A 69 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCCh---HHhC---ccccccCCceeecC-CHHHhhcC----C
Confidence 57999999999999999999987 5788754 5443211100 0111 111111 1112211 12333345 9
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCCh
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLL 215 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~ 215 (405)
|+||.|.+. .....++..+.++| +++|=+|+..-..+..
T Consensus 70 DvVf~alP~-------------~~s~~~~~~~~~~G-~~VIDlS~~fR~~~~~ 108 (346)
T TIGR01850 70 DVVFLALPH-------------GVSAELAPELLAAG-VKVIDLSADFRLKDPE 108 (346)
T ss_pred CEEEECCCc-------------hHHHHHHHHHHhCC-CEEEeCChhhhcCChh
Confidence 999987653 23566777777777 5888888876655433
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00098 Score=63.67 Aligned_cols=95 Identities=21% Similarity=0.334 Sum_probs=57.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCe---EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFN---VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+++|+|+||||++|+.+++.|.+++|. ++.+... +..- +.+. ..+ ...++.+.+.. .+++
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG------~~l~-~~~---~~l~~~~~~~~--~~~~---- 66 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS-ESAG------HSVP-FAG---KNLRVREVDSF--DFSQ---- 66 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCC------Ceec-cCC---cceEEeeCChH--HhcC----
Confidence 378999999999999999999987654 3344333 2211 1111 112 12333333321 1455
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+|+||.+++. .....+++.+.++|+ ++|=.|+..-
T Consensus 67 vD~vFla~p~-------------~~s~~~v~~~~~~G~-~VIDlS~~fR 101 (336)
T PRK05671 67 VQLAFFAAGA-------------AVSRSFAEKARAAGC-SVIDLSGALP 101 (336)
T ss_pred CCEEEEcCCH-------------HHHHHHHHHHHHCCC-eEEECchhhc
Confidence 9999986641 123457778878886 4776776654
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0029 Score=59.78 Aligned_cols=108 Identities=14% Similarity=0.179 Sum_probs=75.3
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhcc---CCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQL---QGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~---~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
||.|.|+ |.||..++..|+.+| .++++++.+++...+....+...... ..+.+..+| -+.+++
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~---- 68 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCAD---- 68 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCC----
Confidence 5889999 999999999999887 37999999877654433333222221 134444333 244566
Q ss_pred ccEEEEcccccCC---C--CcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 162 IDVVVSCLASRSG---G--VKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~--~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
+|+||-+||.... . ..+.+..|..-.+.+++..++.+.+-++.+-
T Consensus 69 aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivv 118 (307)
T cd05290 69 ADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILI 118 (307)
T ss_pred CCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 9999999997532 2 2567889999999999999998865444433
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0015 Score=62.72 Aligned_cols=91 Identities=22% Similarity=0.398 Sum_probs=57.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEE---EEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVI---AIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~---~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
+|+|.||||++|+.+++.|.+++|.+. .+.+...... .+. ..+...+..|+.. ..+++ +|
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~-------~~~-~~~~~~~~~~~~~-----~~~~~----~D 63 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGR-------KVT-FKGKELEVNEAKI-----ESFEG----ID 63 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCC-------eee-eCCeeEEEEeCCh-----HHhcC----CC
Confidence 589999999999999999999887644 4445543221 111 2245566666641 23455 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+||.+++.. .+..++..+.+.|+ ++|=.|+.
T Consensus 64 ~v~~a~g~~-------------~s~~~a~~~~~~G~-~VID~ss~ 94 (339)
T TIGR01296 64 IALFSAGGS-------------VSKEFAPKAAKCGA-IVIDNTSA 94 (339)
T ss_pred EEEECCCHH-------------HHHHHHHHHHHCCC-EEEECCHH
Confidence 999887632 24445555566676 46555553
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0029 Score=60.29 Aligned_cols=111 Identities=14% Similarity=0.113 Sum_probs=73.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC--C-----eEEEEecCCC--CcCCCCchhHhhh-c-cCCcEEEEcCCCCHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG--F-----NVIAIAREKS--GIRGRNDKEETLN-Q-LQGASVCFSDVTNLESLEK 153 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g--~-----~V~~l~r~~~--~~~~~~~~~~~~~-~-~~~v~~~~~Dl~d~~~l~~ 153 (405)
++||.|+|++|.+|..++-.|+..| . +++++++++. ++.+....+.... . ..++.+. . ...+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-~------~~y~ 76 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-D------DPNV 76 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-c------ChHH
Confidence 4689999999999999999998876 2 7999998653 2333222222211 1 1122221 1 1235
Q ss_pred HHHhhCCCccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEc
Q 043385 154 SLENLGTSIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLS 206 (405)
Q Consensus 154 ~~~~~~~~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~S 206 (405)
.+++ +|+||-+||... .+..+.++.|..-.+.+.+..++.. -..+|.+|
T Consensus 77 ~~~d----aDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 77 AFKD----ADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred HhCC----CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 5666 999999999643 2344578899999999999998843 33556555
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0025 Score=57.98 Aligned_cols=107 Identities=19% Similarity=0.189 Sum_probs=65.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchh----------------Hhhhc-cCCc--EEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKE----------------ETLNQ-LQGA--SVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~----------------~~~~~-~~~v--~~~~ 142 (405)
++..+|+|.|+ |++|+.+++.|+..| -++++++.+.-......+.. +.+.. .+.+ +.+.
T Consensus 22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~ 100 (240)
T TIGR02355 22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN 100 (240)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 45678999998 999999999999999 47888887654332211110 01111 1333 3333
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
..++ .+.+.+.+++ +|+||.+.. |...-..+-++|.+.++ .+|+.++.
T Consensus 101 ~~i~-~~~~~~~~~~----~DlVvd~~D------------~~~~r~~ln~~~~~~~i-p~v~~~~~ 148 (240)
T TIGR02355 101 AKLD-DAELAALIAE----HDIVVDCTD------------NVEVRNQLNRQCFAAKV-PLVSGAAI 148 (240)
T ss_pred ccCC-HHHHHHHhhc----CCEEEEcCC------------CHHHHHHHHHHHHHcCC-CEEEEEec
Confidence 3333 3456677776 899998653 23333445567888776 46665543
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0021 Score=62.08 Aligned_cols=110 Identities=17% Similarity=0.220 Sum_probs=70.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCch-------------------hHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDK-------------------EETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-------------------~~~~~~~~~v~~~~ 142 (405)
++..+|+|.|+ |++|+.+++.|+..|. ++++++.+.-......+. +..+...-+++.+.
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 45679999999 9999999999999994 788888865222111110 11111112345555
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
.+++. +...+.+++ +|+||.+.. |...-..+-++|.+.++ .+|+.+..+-+
T Consensus 105 ~~i~~-~~~~~~~~~----~DvVvd~~d------------~~~~r~~~n~~c~~~~i-p~v~~~~~g~~ 155 (355)
T PRK05597 105 RRLTW-SNALDELRD----ADVILDGSD------------NFDTRHLASWAAARLGI-PHVWASILGFD 155 (355)
T ss_pred eecCH-HHHHHHHhC----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEEEecCe
Confidence 55553 456667777 999998753 23333345567888886 47877655543
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.002 Score=62.88 Aligned_cols=107 Identities=17% Similarity=0.188 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCC-------------ch---hHhhhc-cCCc--EEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRN-------------DK---EETLNQ-LQGA--SVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~-------------~~---~~~~~~-~~~v--~~~~ 142 (405)
++..+|+|.|+ |++|++++..|+..|. ++++++++.-...... +. .+.+.. .+.+ +.+.
T Consensus 133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 45678999988 8899999999999995 7999998731111000 00 011111 1333 3444
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
..++ .+.+.+.+++ +|+||++... ...-..+-++|++.++ .+|+.+..
T Consensus 212 ~~~~-~~~~~~~~~~----~D~Vv~~~d~------------~~~r~~ln~~~~~~~i-p~i~~~~~ 259 (376)
T PRK08762 212 ERVT-SDNVEALLQD----VDVVVDGADN------------FPTRYLLNDACVKLGK-PLVYGAVF 259 (376)
T ss_pred ccCC-hHHHHHHHhC----CCEEEECCCC------------HHHHHHHHHHHHHcCC-CEEEEEec
Confidence 4443 3456677777 9999987542 2222335577888886 57766544
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0022 Score=55.44 Aligned_cols=103 Identities=16% Similarity=0.207 Sum_probs=62.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC---CCcCCCC---------------chhHhhhccCCcEEEEcCCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGF-NVIAIAREK---SGIRGRN---------------DKEETLNQLQGASVCFSDVTN 147 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~---~~~~~~~---------------~~~~~~~~~~~v~~~~~Dl~d 147 (405)
+|+|.|+ |.+|+.+++.|++.|. ++++++.+. +.+..+. +.+..+...-+++.+...+++
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 5899998 9999999999999996 699999875 2221000 000111111234444555544
Q ss_pred HHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEccc
Q 043385 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAI 208 (405)
Q Consensus 148 ~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~ 208 (405)
+.+.+.+++ +|+||.+.. |...-..+.+.+.+. ++ .+|+-+..
T Consensus 80 -~~~~~~l~~----~DlVi~~~d------------~~~~r~~i~~~~~~~~~i-p~i~~~~~ 123 (174)
T cd01487 80 -NNLEGLFGD----CDIVVEAFD------------NAETKAMLAESLLGNKNK-PVVCASGM 123 (174)
T ss_pred -hhHHHHhcC----CCEEEECCC------------CHHHHHHHHHHHHHHCCC-CEEEEehh
Confidence 456677777 999998632 233334466666665 65 46655433
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0027 Score=57.50 Aligned_cols=109 Identities=22% Similarity=0.273 Sum_probs=64.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCc-------------h-------hHhhhccCCcEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRND-------------K-------EETLNQLQGASVC 141 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~-------------~-------~~~~~~~~~v~~~ 141 (405)
.++.+|+|.|+ |++|+++++.|+..| .++++++.+.-......+ + +..+...-.++.+
T Consensus 25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~ 103 (231)
T PRK08328 25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETF 103 (231)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEE
Confidence 45678999999 899999999999999 478888865432211110 0 0111111133444
Q ss_pred EcCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 142 FSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 142 ~~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
...+ +.+.+.+.+++ +|+||.+.. |...-..+-++|++.++ .+|+.++.+.
T Consensus 104 ~~~~-~~~~~~~~l~~----~D~Vid~~d------------~~~~r~~l~~~~~~~~i-p~i~g~~~g~ 154 (231)
T PRK08328 104 VGRL-SEENIDEVLKG----VDVIVDCLD------------NFETRYLLDDYAHKKGI-PLVHGAVEGT 154 (231)
T ss_pred eccC-CHHHHHHHHhc----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEeeccC
Confidence 4455 34456667776 888887643 22222234456777775 4666555443
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0022 Score=61.95 Aligned_cols=36 Identities=28% Similarity=0.534 Sum_probs=30.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKS 120 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~ 120 (405)
+++|+|+||||++|+.+++.|.+.. .+++++.++..
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~ 39 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASER 39 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChh
Confidence 5799999999999999999999875 48888855543
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0062 Score=55.69 Aligned_cols=106 Identities=16% Similarity=0.167 Sum_probs=64.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCc-------------------hhHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRND-------------------KEETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~-------------------~~~~~~~~~~v~~~~ 142 (405)
++..+|+|.|+ |.+|+.+++.|+..|. ++++++.+.-......+ .+..+...-+++.+.
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~ 108 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN 108 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 45679999999 9999999999999994 78888875432211111 011111112344445
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
..++ .+.+.+.+++ +|+||.+.. |...-..+-++|++.++ .+|+.++
T Consensus 109 ~~i~-~~~~~~~~~~----~DiVi~~~D------------~~~~r~~ln~~~~~~~i-p~v~~~~ 155 (245)
T PRK05690 109 ARLD-DDELAALIAG----HDLVLDCTD------------NVATRNQLNRACFAAKK-PLVSGAA 155 (245)
T ss_pred ccCC-HHHHHHHHhc----CCEEEecCC------------CHHHHHHHHHHHHHhCC-EEEEeee
Confidence 4454 3456667776 899998653 23333345567777775 4665443
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0048 Score=61.85 Aligned_cols=122 Identities=16% Similarity=0.091 Sum_probs=78.3
Q ss_pred EEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEEEcc
Q 043385 90 VVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCL 169 (405)
Q Consensus 90 VtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv~~a 169 (405)
|+||+|.+|.++++.|...|++|++..+.+.+.. .....++..+..|.+..+..+++..-
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~--------~~~~~~~~~~~~d~~~~~~~~~l~~~------------ 102 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA--------AGWGDRFGALVFDATGITDPADLKAL------------ 102 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCccccccc--------cCcCCcccEEEEECCCCCCHHHHHHH------------
Confidence 7788899999999999999999998766554211 00011333233344333222211110
Q ss_pred cccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhhh-cCCceEEEEecCC
Q 043385 170 ASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEE-DSGFTYSIVRPTA 247 (405)
Q Consensus 170 ~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~-~~gi~~~ilRp~~ 247 (405)
.......++.+.. -++||++++.........|..+|..++.+++.++.| ..++++..+.|+.
T Consensus 103 --------------~~~~~~~l~~l~~--~griv~i~s~~~~~~~~~~~~akaal~gl~rsla~E~~~gi~v~~i~~~~ 165 (450)
T PRK08261 103 --------------YEFFHPVLRSLAP--CGRVVVLGRPPEAAADPAAAAAQRALEGFTRSLGKELRRGATAQLVYVAP 165 (450)
T ss_pred --------------HHHHHHHHHhccC--CCEEEEEccccccCCchHHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCC
Confidence 1112223333332 259999999877656667999999999999998876 4689999998875
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.004 Score=59.00 Aligned_cols=111 Identities=12% Similarity=0.170 Sum_probs=74.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccC-CcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQ-GASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~-~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+||.|+|+ |.||..++..|+..| .++++++++++...+....+....... ...+... .|.+ .+++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~----~~~~---- 71 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS----VTAN---- 71 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH----HhCC----
Confidence 368999997 999999999998887 479999998866544333222222111 1233321 1232 2566
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||-+||.... +..+.++.|..-.+.+.+..++.+.+ .+|.+|
T Consensus 72 adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 120 (312)
T cd05293 72 SKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS 120 (312)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence 9999999997542 33457788999999999999888754 455455
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00069 Score=57.20 Aligned_cols=75 Identities=17% Similarity=0.271 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.++++|+|+|+ |.+|..+++.|.+.| ++|++++|++++... ..... +...+..+..+. .+.+++
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~------~~~~~-~~~~~~~~~~~~---~~~~~~---- 81 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKA------LAERF-GELGIAIAYLDL---EELLAE---- 81 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHH------HHHHH-hhcccceeecch---hhcccc----
Confidence 45689999998 999999999999996 889999998764321 11111 111112233333 333555
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
+|+||++.+..
T Consensus 82 ~Dvvi~~~~~~ 92 (155)
T cd01065 82 ADLIINTTPVG 92 (155)
T ss_pred CCEEEeCcCCC
Confidence 99999987754
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0029 Score=58.67 Aligned_cols=109 Identities=17% Similarity=0.190 Sum_probs=67.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCch-------------------hHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDK-------------------EETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~-------------------~~~~~~~~~v~~~~ 142 (405)
++..+|+|.|+ |++|+.+++.|+..| -+++++|.+.-......+. +..+...-+++.+.
T Consensus 25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 45678999999 899999999999999 4788888764322111110 01111112345555
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
..++ ++.+.+.+++ +|+||++.-.. +...-..+-++|++.++ .+|+.+..
T Consensus 104 ~~l~-~~n~~~ll~~----~DlVvD~~D~~----------~~~~r~~ln~~c~~~~i-P~V~~~~~ 153 (287)
T PRK08223 104 EGIG-KENADAFLDG----VDVYVDGLDFF----------EFDARRLVFAACQQRGI-PALTAAPL 153 (287)
T ss_pred cccC-ccCHHHHHhC----CCEEEECCCCC----------cHHHHHHHHHHHHHcCC-CEEEEecc
Confidence 5554 3446777777 99999754211 12333445678888886 47765543
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0061 Score=58.06 Aligned_cols=113 Identities=18% Similarity=0.217 Sum_probs=73.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCc-EEEEcCCCCHHHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGA-SVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+.++|.|+|| |.+|..++..|+..| .+|++++++++...+............+. .-+.+ -.| .+ ++++
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-~l~~---- 73 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-DIKD---- 73 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH-HhCC----
Confidence 4579999998 999999999999888 78999999877643221111111111111 11121 122 33 5676
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCE-EEEEc
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASH-FVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~-~V~~S 206 (405)
+|+||.++|.... ...+....|..-.+.+.+.+.+...+- +|.+|
T Consensus 74 ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvs 122 (319)
T PTZ00117 74 SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVT 122 (319)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999999976432 233466778877888888888876554 66555
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0054 Score=54.08 Aligned_cols=109 Identities=18% Similarity=0.180 Sum_probs=65.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCc-------------------hhHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRND-------------------KEETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~-------------------~~~~~~~~~~v~~~~ 142 (405)
++..+|+|.|+ |.+|.++++.|+..|. ++++++.+.-......+ .+..+...-.++.+.
T Consensus 19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~ 97 (197)
T cd01492 19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT 97 (197)
T ss_pred HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence 45678999998 5599999999999995 68888876432211111 011222222344455
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
..+.+ ...+.+++ +|+||.+.. |......+-+.|++.++ .+|+.++.+-+
T Consensus 98 ~~~~~--~~~~~~~~----~dvVi~~~~------------~~~~~~~ln~~c~~~~i-p~i~~~~~G~~ 147 (197)
T cd01492 98 DDISE--KPEEFFSQ----FDVVVATEL------------SRAELVKINELCRKLGV-KFYATGVHGLF 147 (197)
T ss_pred cCccc--cHHHHHhC----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEEecCCE
Confidence 55542 23445666 899997643 22334445678888887 47777665543
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0057 Score=54.29 Aligned_cols=95 Identities=24% Similarity=0.203 Sum_probs=65.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++++++|+|.|| |.+|..-++.|++.|++|++++....+ .+..+....+++++..+.... .+++
T Consensus 6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~------~l~~l~~~~~i~~~~~~~~~~-----dl~~---- 69 (205)
T TIGR01470 6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELES------ELTLLAEQGGITWLARCFDAD-----ILEG---- 69 (205)
T ss_pred EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCH------HHHHHHHcCCEEEEeCCCCHH-----HhCC----
Confidence 367889999999 999999999999999999999865432 112333334789999887632 2455
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
+|.||-+.+.. .-...+...|++.++ +|++.
T Consensus 70 ~~lVi~at~d~------------~ln~~i~~~a~~~~i--lvn~~ 100 (205)
T TIGR01470 70 AFLVIAATDDE------------ELNRRVAHAARARGV--PVNVV 100 (205)
T ss_pred cEEEEECCCCH------------HHHHHHHHHHHHcCC--EEEEC
Confidence 89988543311 123357777777664 55444
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.005 Score=59.10 Aligned_cols=104 Identities=17% Similarity=0.224 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe---EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFN---VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
..++|.|.||||++|+.+++.|.+++|. +..+....... +.+.. .+..+...++. + +.+++
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaG-------k~~~~-~~~~~~v~~~~-~----~~~~~--- 69 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAG-------KKVTF-EGRDYTVEELT-E----DSFDG--- 69 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCC-------Ceeee-cCceeEEEeCC-H----HHHcC---
Confidence 3578999999999999999999998763 44443321111 01111 12333333443 2 23455
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHH
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQ 218 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~ 218 (405)
+|+||.+++.. ....++..+.+.|+ ++|=.|+..-..+..+|+
T Consensus 70 -~D~vf~a~p~~-------------~s~~~~~~~~~~g~-~VIDlS~~fR~~~~~p~~ 112 (344)
T PLN02383 70 -VDIALFSAGGS-------------ISKKFGPIAVDKGA-VVVDNSSAFRMEEGVPLV 112 (344)
T ss_pred -CCEEEECCCcH-------------HHHHHHHHHHhCCC-EEEECCchhhcCCCCceE
Confidence 99999876531 24455555656665 677777766544444443
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0066 Score=58.36 Aligned_cols=110 Identities=11% Similarity=0.168 Sum_probs=74.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhcc-CCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQL-QGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+||.|+|+ |.||+.++-.|+..| .++++++.+++...+....+...... .... +.++ .|.+ .+++ +
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~-i~~~-~dy~----~~~d----a 106 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK-ILAS-TDYA----VTAG----S 106 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE-EEeC-CCHH----HhCC----C
Confidence 69999997 999999999999887 47999999887654433332222211 1222 2221 1222 2566 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
|+||-+||.... +..+....|+.-.+.+++..++.+.+ .+|.+|
T Consensus 107 DiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 107 DLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999999997532 33457788988899999998887754 455555
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0036 Score=56.56 Aligned_cols=110 Identities=17% Similarity=0.182 Sum_probs=66.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCch------------h----Hhhhc-cCC--cEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDK------------E----ETLNQ-LQG--ASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~------------~----~~~~~-~~~--v~~~~ 142 (405)
++..+|+|.|. |++|+++++.|++.|. ++++++.+.-......+. . +.+.. .|. ++.+.
T Consensus 9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~ 87 (231)
T cd00755 9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE 87 (231)
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence 45678999999 8999999999999994 788888764222111110 0 01111 133 34444
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
..++ ++.+.+.+.. ++|+||.+.. |+..-..+.+.|++.+++ +|...+.+.
T Consensus 88 ~~i~-~~~~~~l~~~---~~D~VvdaiD------------~~~~k~~L~~~c~~~~ip-~I~s~g~g~ 138 (231)
T cd00755 88 EFLT-PDNSEDLLGG---DPDFVVDAID------------SIRAKVALIAYCRKRKIP-VISSMGAGG 138 (231)
T ss_pred eecC-HhHHHHHhcC---CCCEEEEcCC------------CHHHHHHHHHHHHHhCCC-EEEEeCCcC
Confidence 4444 3455555542 4899998753 234455688899988864 655544443
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.004 Score=60.41 Aligned_cols=109 Identities=16% Similarity=0.195 Sum_probs=69.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCch-------------------hHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDK-------------------EETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~-------------------~~~~~~~~~v~~~~ 142 (405)
++..+|+|.|+ |++|+.+++.|+..| .++++++.+.-......+. +..+...-+++.+.
T Consensus 39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 117 (370)
T PRK05600 39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALR 117 (370)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEee
Confidence 45678999999 899999999999999 4899998864222111111 01111112345555
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
..++ .+.+.+.+++ +|+||.|.. |...-..+-++|.+.++ .+|+.+..+-
T Consensus 118 ~~i~-~~~~~~~~~~----~DlVid~~D------------n~~~r~~in~~~~~~~i-P~v~~~~~g~ 167 (370)
T PRK05600 118 ERLT-AENAVELLNG----VDLVLDGSD------------SFATKFLVADAAEITGT-PLVWGTVLRF 167 (370)
T ss_pred eecC-HHHHHHHHhC----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEEEecC
Confidence 5554 4557778887 999998754 33433345567888886 4777665443
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0094 Score=54.94 Aligned_cols=111 Identities=17% Similarity=0.206 Sum_probs=68.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchh----------------Hhhh-ccCCcEEEEc-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKE----------------ETLN-QLQGASVCFS- 143 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~----------------~~~~-~~~~v~~~~~- 143 (405)
++..+|+|.|+ |++|+++++.|++.| -++++++.+.-......+.. +.+. -.+.+++...
T Consensus 28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~ 106 (268)
T PRK15116 28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD 106 (268)
T ss_pred hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence 45678999998 999999999999999 68999987643322211110 0111 1233333222
Q ss_pred CCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 144 DVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 144 Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+.-+++.+.+.+.. ++|+||.+... +..-..+.+.|++.++ .+|.+...+.
T Consensus 107 ~~i~~e~~~~ll~~---~~D~VIdaiD~------------~~~k~~L~~~c~~~~i-p~I~~gGag~ 157 (268)
T PRK15116 107 DFITPDNVAEYMSA---GFSYVIDAIDS------------VRPKAALIAYCRRNKI-PLVTTGGAGG 157 (268)
T ss_pred cccChhhHHHHhcC---CCCEEEEcCCC------------HHHHHHHHHHHHHcCC-CEEEECCccc
Confidence 22345566666642 48999987652 2334457888998887 4665555543
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0058 Score=60.27 Aligned_cols=111 Identities=17% Similarity=0.191 Sum_probs=76.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-------CC--eEEEEecCCCCcCCCCchhHhhh-cc-CCcEEEEcCCCCHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR-------GF--NVIAIAREKSGIRGRNDKEETLN-QL-QGASVCFSDVTNLESLEK 153 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~-------g~--~V~~l~r~~~~~~~~~~~~~~~~-~~-~~v~~~~~Dl~d~~~l~~ 153 (405)
.-+|.|+|++|.||.+++-.|+.. |. +++.++++++.+.+....+.... .. .++.+..+ | .+
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye 172 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YE 172 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence 358999999999999999999988 63 79999999887754433322221 11 12222222 2 24
Q ss_pred HHHhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHh-cCCC-EEEEEc
Q 043385 154 SLENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRN-CGAS-HFVLLS 206 (405)
Q Consensus 154 ~~~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~-~~v~-~~V~~S 206 (405)
.+++ +|+||-.||.... +..+..+.|+.-.+.+.+...+ ++-+ .+|.+|
T Consensus 173 ~~kd----aDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs 226 (444)
T PLN00112 173 VFQD----AEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG 226 (444)
T ss_pred HhCc----CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence 4566 9999999997532 3445788999999999999988 5644 455555
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0092 Score=52.75 Aligned_cols=80 Identities=19% Similarity=0.316 Sum_probs=52.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecC---CCCcCCCCchh------------Hhhhc-cC--CcEEEEc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIARE---KSGIRGRNDKE------------ETLNQ-LQ--GASVCFS 143 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~---~~~~~~~~~~~------------~~~~~-~~--~v~~~~~ 143 (405)
++..+|+|.|+ |.+|+.++..|++.|. +|++++++ .+.+..+.... +.+.. .+ +++.+..
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~ 97 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE 97 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence 45678999999 8899999999999997 69999988 44332211000 01111 12 3445555
Q ss_pred CCCCHHHHHHHHHhhCCCccEEEEc
Q 043385 144 DVTNLESLEKSLENLGTSIDVVVSC 168 (405)
Q Consensus 144 Dl~d~~~l~~~~~~~~~~~d~Vv~~ 168 (405)
+++ .+.+.+.+++ +|+||.+
T Consensus 98 ~i~-~~~~~~~~~~----~DlVi~a 117 (200)
T TIGR02354 98 KIT-EENIDKFFKD----ADIVCEA 117 (200)
T ss_pred eCC-HhHHHHHhcC----CCEEEEC
Confidence 564 3557777776 8999986
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0055 Score=51.02 Aligned_cols=104 Identities=19% Similarity=0.319 Sum_probs=64.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCc------------hh----Hhhhc-cCC--cEEEEcCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRND------------KE----ETLNQ-LQG--ASVCFSDVT 146 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~------------~~----~~~~~-~~~--v~~~~~Dl~ 146 (405)
+|+|.|+ |.+|+++++.|+..|. ++++++.+.-......+ +. +.+.. .+. ++.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5899998 9999999999999996 68888876322111000 00 01111 123 344444544
Q ss_pred CHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 147 d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+.. ..+.+++ +|+||.+.. |......+.+.|++.++ .+|..++.+
T Consensus 80 ~~~-~~~~~~~----~diVi~~~d------------~~~~~~~l~~~~~~~~i-~~i~~~~~g 124 (143)
T cd01483 80 EDN-LDDFLDG----VDLVIDAID------------NIAVRRALNRACKELGI-PVIDAGGLG 124 (143)
T ss_pred hhh-HHHHhcC----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEcCCC
Confidence 432 3455565 999998754 23455667788888886 466666554
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0049 Score=59.16 Aligned_cols=103 Identities=17% Similarity=0.230 Sum_probs=62.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh-CC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL-GT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-~~ 160 (405)
..+.+|||+||+|.+|..+++.+...|.+|+++++++++. +.+.. . ++..+ .|..+.+++.+.+... .+
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~-------~~~~~~l-Ga~~v-i~~~~~~~~~~~i~~~~~~ 220 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKV-------DLLKNKL-GFDDA-FNYKEEPDLDAALKRYFPN 220 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHhc-CCcee-EEcCCcccHHHHHHHhCCC
Confidence 3467999999999999999998888999999998876543 22222 2 33222 2322222232222211 13
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
++|+||++.|. ......++.++.. +++|.++...
T Consensus 221 gvd~v~d~~g~-------------~~~~~~~~~l~~~--G~iv~~G~~~ 254 (338)
T cd08295 221 GIDIYFDNVGG-------------KMLDAVLLNMNLH--GRIAACGMIS 254 (338)
T ss_pred CcEEEEECCCH-------------HHHHHHHHHhccC--cEEEEecccc
Confidence 59999998762 1233445555544 4788777543
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0036 Score=60.17 Aligned_cols=82 Identities=24% Similarity=0.378 Sum_probs=55.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
..+++.|||.||+|.+|++.++.+...|..+++.+++.++. +....+ +... ..|+.+++.++...+...++
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-------~l~k~l-GAd~-vvdy~~~~~~e~~kk~~~~~ 225 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-------ELVKKL-GADE-VVDYKDENVVELIKKYTGKG 225 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-------HHHHHc-CCcE-eecCCCHHHHHHHHhhcCCC
Confidence 34577999999999999999998888895555555555543 333333 3222 24788866555555521256
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
+|+|++|.|..
T Consensus 226 ~DvVlD~vg~~ 236 (347)
T KOG1198|consen 226 VDVVLDCVGGS 236 (347)
T ss_pred ccEEEECCCCC
Confidence 99999999864
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0058 Score=56.36 Aligned_cols=85 Identities=24% Similarity=0.358 Sum_probs=56.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEE-EecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 86 INILVVGSTGYIGKFVVEELVSR-GFNVIA-IAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~-l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|.|+|++|.+|+.+++.+.+. +.++++ ++++++... .. -..++...+++.+++++ +|
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~-------~~--------~~~~i~~~~dl~~ll~~----~D 62 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLV-------GQ--------GALGVAITDDLEAVLAD----AD 62 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccc-------cc--------CCCCccccCCHHHhccC----CC
Confidence 68999999999999999988875 677766 555544321 00 11233333445666665 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEE
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V 203 (405)
+||+++.+ .....++..|.++|+ ++|
T Consensus 63 vVid~t~p-------------~~~~~~~~~al~~G~-~vv 88 (257)
T PRK00048 63 VLIDFTTP-------------EATLENLEFALEHGK-PLV 88 (257)
T ss_pred EEEECCCH-------------HHHHHHHHHHHHcCC-CEE
Confidence 99997642 234567778888886 455
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.00065 Score=64.45 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=32.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
|+|.|+| .|.+|..++..|+++|++|++++|+++..
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~ 38 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAA 38 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHH
Confidence 5799999 59999999999999999999999987543
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.012 Score=56.13 Aligned_cols=112 Identities=16% Similarity=0.197 Sum_probs=72.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccC--CcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQ--GASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~--~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+.+||.|+|| |.+|..++..|+..|. +|++++++++...+............ ..++.. ..| . +.+++
T Consensus 5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d---~-~~l~~--- 74 (321)
T PTZ00082 5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNN---Y-EDIAG--- 74 (321)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCC---H-HHhCC---
Confidence 3478999996 9999999999999994 89999998876432111111111111 122322 122 2 34666
Q ss_pred CccEEEEcccccCC--------CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 161 SIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.+++.... +..+....|+.-.+.+++.+.+.+.+ .+|.+|
T Consensus 75 -aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s 128 (321)
T PTZ00082 75 -SDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT 128 (321)
T ss_pred -CCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999999886532 12235567888888888888887755 566666
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0067 Score=57.54 Aligned_cols=111 Identities=12% Similarity=0.191 Sum_probs=69.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccC--CcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQ--GASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~--~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++||.|+|| |.+|..++..|+..|. +|++++++++...+............ ...+. . -.| . +.+++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~-~-~~d---~-~~~~~---- 70 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKIT-G-TND---Y-EDIAG---- 70 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEE-e-CCC---H-HHHCC----
Confidence 479999999 9999999999998875 99999998775432211111110000 11111 1 112 2 24566
Q ss_pred ccEEEEcccccCCC---CcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 162 IDVVVSCLASRSGG---VKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~---~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.+++..... ..+....|+.-.+.+++.+.+...+ .+|.+|
T Consensus 71 aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t 119 (307)
T PRK06223 71 SDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT 119 (307)
T ss_pred CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99999988765321 2234567888888888887776544 355554
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.006 Score=58.02 Aligned_cols=99 Identities=25% Similarity=0.376 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+.+|+|+||+|.+|..+++.+.+.|.+|+++++++++. +.+... +...+ .|..+ +.+.+... .++|
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~-------~~~~~~-~~~~~-~~~~~---~~~~~~~~-~~~d 228 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKL-------KILKEL-GADYV-IDGSK---FSEDVKKL-GGAD 228 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH-------HHHHHc-CCcEE-EecHH---HHHHHHhc-cCCC
Confidence 457899999999999999999999999999999876542 222222 22211 12222 33333321 1499
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+|++++|.. .....++.+... +++|.++....
T Consensus 229 ~v~~~~g~~-------------~~~~~~~~~~~~--g~~v~~g~~~~ 260 (332)
T cd08259 229 VVIELVGSP-------------TIEESLRSLNKG--GRLVLIGNVTP 260 (332)
T ss_pred EEEECCChH-------------HHHHHHHHhhcC--CEEEEEcCCCC
Confidence 999988732 123344444433 47888876543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0032 Score=58.26 Aligned_cols=110 Identities=14% Similarity=0.167 Sum_probs=73.5
Q ss_pred EEEEcCCChhHHHHHHHHHhCC----CeEEEEecCCCCcCCCCchhHhhhccC-CcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 88 ILVVGSTGYIGKFVVEELVSRG----FNVIAIAREKSGIRGRNDKEETLNQLQ-GASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~-~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
|.|+||+|.+|..++..|+..| .+|++++++++++......+....... ..++.. .+++.+++++ +
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~-----~~d~~~~~~~----a 71 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI-----TDDPYEAFKD----A 71 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEE-----CCchHHHhCC----C
Confidence 5789999999999999999988 789999998877654333322222211 112221 1235567777 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
|+||..++.... ...+....|+.-.+.+.+.+++.+.+ .+|.+|
T Consensus 72 DiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 72 DVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999998886432 22335667888888888888887644 444444
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.011 Score=56.18 Aligned_cols=109 Identities=15% Similarity=0.218 Sum_probs=70.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
|+|.|.|+ |.+|..++..|+.+| .+|.++++++++..+....+..... .....+..+ |. +.+++ +
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d~----~~l~~----a 68 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---DY----ADCKG----A 68 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---CH----HHhCC----C
Confidence 57999999 999999999999999 6899999987654321111111110 012222222 22 23666 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
|+||.+++.... +..+....|+.-.+.+++.+++.+-+-+|.+-
T Consensus 69 DiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~ 115 (308)
T cd05292 69 DVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVV 115 (308)
T ss_pred CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 999999886532 23345677888888888888877654444333
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0044 Score=62.02 Aligned_cols=78 Identities=19% Similarity=0.186 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+.+++|+|||++| +|.+.++.|++.|++|++.+++...... ....+.. .++.+..++.. ..+ +.. ++
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~---~~~~l~~-~g~~~~~~~~~--~~~---~~~---~~ 69 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENP---EAQELLE-EGIKVICGSHP--LEL---LDE---DF 69 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchh---HHHHHHh-cCCEEEeCCCC--HHH---hcC---cC
Confidence 4578999999976 9999999999999999999876543211 1122222 25666554322 212 221 28
Q ss_pred cEEEEcccccC
Q 043385 163 DVVVSCLASRS 173 (405)
Q Consensus 163 d~Vv~~a~~~~ 173 (405)
|.||.+.|...
T Consensus 70 d~vV~s~gi~~ 80 (447)
T PRK02472 70 DLMVKNPGIPY 80 (447)
T ss_pred CEEEECCCCCC
Confidence 99999988764
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0022 Score=68.21 Aligned_cols=160 Identities=18% Similarity=0.187 Sum_probs=106.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhccCCcEE--EEcCCCCHHHHHHHHHhhC--C
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQLQGASV--CFSDVTNLESLEKSLENLG--T 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~--~~~Dl~d~~~l~~~~~~~~--~ 160 (405)
+..+|+||-|+-|..|++.|..+|.+ +++.+|+.-+.--+......+.. .++.+ -.-|++..+..+++++... +
T Consensus 1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~-~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRR-RGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHh-cCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence 67999999999999999999999976 55666665432111111122222 24433 3356666666677776542 5
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEcccccc---CCChhHHHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQ---KPLLEFQRAKLKFEA 226 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~---~~~~~y~~sK~~~E~ 226 (405)
.+-.|||+|..... +..+.-+.-+.||.|+=...++.- .+.||.+||...- ...+.|+.+....|+
T Consensus 1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~aNS~MER 1927 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLANSAMER 1927 (2376)
T ss_pred cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchhhHHHHH
Confidence 78889998875421 112222334566777766666642 5789999988765 356789999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCc
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAF 248 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v 248 (405)
+..+... .|++-+.|.=|.|
T Consensus 1928 iceqRr~--~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1928 ICEQRRH--EGFPGTAIQWGAI 1947 (2376)
T ss_pred HHHHhhh--cCCCcceeeeecc
Confidence 8887554 7888888876654
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0084 Score=54.39 Aligned_cols=112 Identities=19% Similarity=0.223 Sum_probs=71.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe---EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFN---VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~---V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
.+.+|.|.||.|+||+.|...| +.... ..+.+....+ +....+.+... ........-++.+++++++
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~--GVaaDlSHI~T----~s~V~g~~g~~~L~~al~~--- 96 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTP--GVAADLSHINT----NSSVVGFTGADGLENALKG--- 96 (345)
T ss_pred CcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCC--cccccccccCC----CCceeccCChhHHHHHhcC---
Confidence 3568999999999999997654 44433 3333333221 11111111111 1112234445689999998
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||--||.... ..++.+++|.--.+.+..++.++-.+ .+.++|
T Consensus 97 -advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs 145 (345)
T KOG1494|consen 97 -ADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS 145 (345)
T ss_pred -CCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence 9999998987642 45678999999999999998877544 444444
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0077 Score=51.39 Aligned_cols=66 Identities=29% Similarity=0.488 Sum_probs=47.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
|++|.+.|- |-.|+.+++.|+++|++|++.+|++++. +.+... +++. .++..+++++ +|+
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~-------~~~~~~-g~~~-------~~s~~e~~~~----~dv 60 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKA-------EALAEA-GAEV-------ADSPAEAAEQ----ADV 60 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHH-------HHHHHT-TEEE-------ESSHHHHHHH----BSE
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhh-------hhhHHh-hhhh-------hhhhhhHhhc----ccc
Confidence 478999998 9999999999999999999999987654 233322 3222 2346677777 899
Q ss_pred EEEccc
Q 043385 165 VVSCLA 170 (405)
Q Consensus 165 Vv~~a~ 170 (405)
||-+..
T Consensus 61 vi~~v~ 66 (163)
T PF03446_consen 61 VILCVP 66 (163)
T ss_dssp EEE-SS
T ss_pred eEeecc
Confidence 998764
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0085 Score=57.15 Aligned_cols=102 Identities=18% Similarity=0.274 Sum_probs=63.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+.+|||+||+|.+|..+++.+...|.+|+++++++++. +.+... ++..+ .|..+.+.+.+.++... +++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~-------~~~~~l-Ga~~v-i~~~~~~~~~~~~~~~~~~gv 208 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKV-------AYLKKL-GFDVA-FNYKTVKSLEETLKKASPDGY 208 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHc-CCCEE-EeccccccHHHHHHHhCCCCe
Confidence 467999999999999999998888899999998876543 222222 33222 23333222333222211 359
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
|+|+++.|.. .....++.++.. +++|.++...
T Consensus 209 dvv~d~~G~~-------------~~~~~~~~l~~~--G~iv~~G~~~ 240 (325)
T TIGR02825 209 DCYFDNVGGE-------------FSNTVIGQMKKF--GRIAICGAIS 240 (325)
T ss_pred EEEEECCCHH-------------HHHHHHHHhCcC--cEEEEecchh
Confidence 9999987631 123344555443 4888777543
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0015 Score=60.96 Aligned_cols=40 Identities=23% Similarity=0.360 Sum_probs=35.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCc
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGI 122 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~ 122 (405)
+..+++|+|+|+ |++|++++..|.+.| .+|++++|+.++.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a 160 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERA 160 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 456789999998 999999999999999 7999999987654
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.003 Score=55.90 Aligned_cols=40 Identities=20% Similarity=0.322 Sum_probs=35.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
.++++|+|+|+|. |.+|+++++.|.+.|++|++.+++++.
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~ 63 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEA 63 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 4577899999999 799999999999999999999887643
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0068 Score=57.17 Aligned_cols=106 Identities=18% Similarity=0.238 Sum_probs=68.1
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCch-------------------hHhhhccCCcEEEEcCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDK-------------------EETLNQLQGASVCFSDVT 146 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-------------------~~~~~~~~~v~~~~~Dl~ 146 (405)
+|||.|+ |++|.++++.|+..|. +++++|.+.-......+. +..+...-.++.+..++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 5899998 9999999999999994 788888764322111110 011111124566667777
Q ss_pred CHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 147 d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+.....+.+++ +|+||.+.- |...-..+-+.|.+.++ .+|...+.+.
T Consensus 80 ~~~~~~~f~~~----~DvVv~a~D------------n~~ar~~in~~c~~~~i-p~I~~gt~G~ 126 (312)
T cd01489 80 DPDFNVEFFKQ----FDLVFNALD------------NLAARRHVNKMCLAADV-PLIESGTTGF 126 (312)
T ss_pred CccchHHHHhc----CCEEEECCC------------CHHHHHHHHHHHHHCCC-CEEEEecCcc
Confidence 65434466776 999998642 34444556677888876 4777666554
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0058 Score=63.42 Aligned_cols=94 Identities=19% Similarity=0.324 Sum_probs=68.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~d 163 (405)
.++|+|.|. |-+|+.+++.|.++|+++++++.+++.. +.... .+..++.||.+|++.++++ ++ ++|
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v-------~~~~~-~g~~v~~GDat~~~~L~~agi~----~A~ 466 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAV-------NLMRK-YGYKVYYGDATQLELLRAAGAE----KAE 466 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHH-------HHHHh-CCCeEEEeeCCCHHHHHhcCCc----cCC
Confidence 357999887 9999999999999999999999998754 33333 4789999999999988875 33 489
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC-EEE
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS-HFV 203 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V 203 (405)
+||-+... -.....++..+++...+ ++|
T Consensus 467 ~vv~~~~d------------~~~n~~i~~~~r~~~p~~~Ii 495 (601)
T PRK03659 467 AIVITCNE------------PEDTMKIVELCQQHFPHLHIL 495 (601)
T ss_pred EEEEEeCC------------HHHHHHHHHHHHHHCCCCeEE
Confidence 99865431 22333456666765433 444
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0076 Score=59.10 Aligned_cols=110 Identities=12% Similarity=0.119 Sum_probs=69.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCch------------h----Hhhhc-cCC--cEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDK------------E----ETLNQ-LQG--ASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~------------~----~~~~~-~~~--v~~~~ 142 (405)
++..+|+|.|+ |++|+.+++.|+..|. ++++++.+.-......+. . +.+.. .+. ++.+.
T Consensus 40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 118 (392)
T PRK07878 40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE 118 (392)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence 45678999999 8999999999999995 688888654222111110 0 01111 233 44455
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
.+++. +...+.+++ +|+||.+.. |...-..+-++|.+.++ .+|+.+..+.+
T Consensus 119 ~~i~~-~~~~~~~~~----~D~Vvd~~d------------~~~~r~~ln~~~~~~~~-p~v~~~~~g~~ 169 (392)
T PRK07878 119 FRLDP-SNAVELFSQ----YDLILDGTD------------NFATRYLVNDAAVLAGK-PYVWGSIYRFE 169 (392)
T ss_pred ccCCh-hHHHHHHhc----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEEeccCE
Confidence 56554 446677877 999998753 33333345577888886 58877766544
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0075 Score=62.16 Aligned_cols=72 Identities=18% Similarity=0.394 Sum_probs=57.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
.+|+|.|+ |-+|+++++.|.++|++|++++.++++. +.... .+..++.||.+|++.++++=-+ ++|.|
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~-------~~~~~-~g~~~i~GD~~~~~~L~~a~i~---~a~~v 485 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRV-------DELRE-RGIRAVLGNAANEEIMQLAHLD---CARWL 485 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHH-------HHHHH-CCCeEEEcCCCCHHHHHhcCcc---ccCEE
Confidence 47899898 9999999999999999999999988654 33333 4789999999999988764322 48988
Q ss_pred EEcc
Q 043385 166 VSCL 169 (405)
Q Consensus 166 v~~a 169 (405)
+-+.
T Consensus 486 iv~~ 489 (558)
T PRK10669 486 LLTI 489 (558)
T ss_pred EEEc
Confidence 7543
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.019 Score=51.14 Aligned_cols=109 Identities=22% Similarity=0.289 Sum_probs=70.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhh-----------------ccCCcEEEEc-C
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLN-----------------QLQGASVCFS-D 144 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~-----------------~~~~v~~~~~-D 144 (405)
+..+|+|.|. |++|++.+++|++.|. ++++++-+.-......+.+-.+. -.|..++... |
T Consensus 29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~ 107 (263)
T COG1179 29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND 107 (263)
T ss_pred hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence 4468999999 8899999999999994 68888765533332222221110 0234444433 4
Q ss_pred CCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 145 VTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 145 l~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
.-.++.+.+.+.. .+|.||.+.- |+..=..++..|.+++++ + +||+++-
T Consensus 108 f~t~en~~~~~~~---~~DyvIDaiD------------~v~~Kv~Li~~c~~~ki~-v--Iss~Gag 156 (263)
T COG1179 108 FITEENLEDLLSK---GFDYVIDAID------------SVRAKVALIAYCRRNKIP-V--ISSMGAG 156 (263)
T ss_pred hhCHhHHHHHhcC---CCCEEEEchh------------hhHHHHHHHHHHHHcCCC-E--Eeecccc
Confidence 4566777777765 6999998642 455556788899998873 3 5666553
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0087 Score=57.61 Aligned_cols=98 Identities=15% Similarity=0.345 Sum_probs=58.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCe---EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSR-GFN---VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~-g~~---V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++|.|.||||++|+.+++.|+++ .+. ++.++...... ......+-.....++.|++. +++
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~--------~~~~f~g~~~~v~~~~~~~~----~~~---- 65 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGG--------AAPSFGGKEGTLQDAFDIDA----LKK---- 65 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCC--------cccccCCCcceEEecCChhH----hcC----
Confidence 68999999999999999966665 455 66655532221 11111222223334444443 345
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEccccccC
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAICVQK 212 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~~~~~ 212 (405)
+|+||.+++. ..++.+...+.++|++ .+|=.||..-..
T Consensus 66 ~Divf~a~~~-------------~~s~~~~~~~~~aG~~~~VID~Ss~fR~~ 104 (369)
T PRK06598 66 LDIIITCQGG-------------DYTNEVYPKLRAAGWQGYWIDAASTLRMK 104 (369)
T ss_pred CCEEEECCCH-------------HHHHHHHHHHHhCCCCeEEEECChHHhCC
Confidence 9999987762 2355677777777864 466666655433
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.007 Score=51.84 Aligned_cols=57 Identities=19% Similarity=0.365 Sum_probs=46.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++.+++|+|+|+++.+|..+++.|.++|.+|+++.|+. +.+.+.+++
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------------~~l~~~l~~---- 87 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------------KNLKEHTKQ---- 87 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------------hhHHHHHhh----
Confidence 57889999999976789999999999999999888752 235566666
Q ss_pred ccEEEEcccc
Q 043385 162 IDVVVSCLAS 171 (405)
Q Consensus 162 ~d~Vv~~a~~ 171 (405)
+|+||.+.+.
T Consensus 88 aDiVIsat~~ 97 (168)
T cd01080 88 ADIVIVAVGK 97 (168)
T ss_pred CCEEEEcCCC
Confidence 8888887664
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0028 Score=56.93 Aligned_cols=37 Identities=30% Similarity=0.373 Sum_probs=33.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
|+|.|+||+|.+|+.++..|++.|++|++.+|++++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~ 37 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA 37 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence 5799999999999999999999999999999987654
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.017 Score=55.27 Aligned_cols=101 Identities=22% Similarity=0.317 Sum_probs=61.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--CCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--TSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--~~~ 162 (405)
+.+|||+||+|.+|...++.+.+.|+.+++.+.+.++. +.+... +...+ .|..+.+ +.+.+++.. .++
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~-------~~~~~l-GAd~v-i~y~~~~-~~~~v~~~t~g~gv 212 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKL-------ELLKEL-GADHV-INYREED-FVEQVRELTGGKGV 212 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHH-------HHHHhc-CCCEE-EcCCccc-HHHHHHHHcCCCCc
Confidence 78999999999999999999999997776666665442 222332 22222 1344433 333333221 259
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
|+|+++.|.. .....+++++.. ++++.+...+.
T Consensus 213 Dvv~D~vG~~-------------~~~~~l~~l~~~--G~lv~ig~~~g 245 (326)
T COG0604 213 DVVLDTVGGD-------------TFAASLAALAPG--GRLVSIGALSG 245 (326)
T ss_pred eEEEECCCHH-------------HHHHHHHHhccC--CEEEEEecCCC
Confidence 9999987632 122244444433 58888887663
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.022 Score=54.12 Aligned_cols=104 Identities=23% Similarity=0.224 Sum_probs=66.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+.+|+|+|+++.+|..+++.+...|++|+++++++++. +.+... +... ..|..+.+....+.+... .++
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~-------~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKL-------ERAKEL-GADY-VIDYRKEDFVREVRELTGKRGV 236 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHc-CCCe-EEecCChHHHHHHHHHhCCCCC
Confidence 467899999999999999999999999999998876543 112211 2221 235555444443333211 359
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
|.++++++.. .....++..+.. +++|.+++....
T Consensus 237 d~~i~~~g~~-------------~~~~~~~~l~~~--G~~v~~~~~~~~ 270 (342)
T cd08266 237 DVVVEHVGAA-------------TWEKSLKSLARG--GRLVTCGATTGY 270 (342)
T ss_pred cEEEECCcHH-------------HHHHHHHHhhcC--CEEEEEecCCCC
Confidence 9999988731 123344444443 589988876543
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0057 Score=57.27 Aligned_cols=71 Identities=23% Similarity=0.397 Sum_probs=51.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+..+++|+|+|. |.+|+.+++.|.+.|++|++.+|++++. ..... .+...+ +.+.+.+.+++
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~-------~~~~~-~g~~~~-----~~~~l~~~l~~---- 209 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADL-------ARITE-MGLIPF-----PLNKLEEKVAE---- 209 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHH-CCCeee-----cHHHHHHHhcc----
Confidence 567899999999 8899999999999999999999987532 11111 122222 23456677776
Q ss_pred ccEEEEccc
Q 043385 162 IDVVVSCLA 170 (405)
Q Consensus 162 ~d~Vv~~a~ 170 (405)
+|+||++..
T Consensus 210 aDiVint~P 218 (287)
T TIGR02853 210 IDIVINTIP 218 (287)
T ss_pred CCEEEECCC
Confidence 999999764
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.028 Score=50.56 Aligned_cols=98 Identities=19% Similarity=0.292 Sum_probs=68.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+++|+|.|||+ =++.|+++|...+..+++.+-..... +..... . ..+.+-..+.+.+.+.++. +++|.
T Consensus 2 ~~~ilvlGGT~-Dar~la~~L~~~~~~~~~ss~t~~g~-------~l~~~~-~-~~~~~G~l~~e~l~~~l~e--~~i~l 69 (257)
T COG2099 2 MMRILLLGGTS-DARALAKKLAAAPVDIILSSLTGYGA-------KLAEQI-G-PVRVGGFLGAEGLAAFLRE--EGIDL 69 (257)
T ss_pred CceEEEEeccH-HHHHHHHHhhccCccEEEEEcccccc-------cchhcc-C-CeeecCcCCHHHHHHHHHH--cCCCE
Confidence 47899999987 58999999999985544444333221 111111 2 2455666778889999988 68999
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEE
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~ 204 (405)
||+...+.. ..-+.|.+++|++.|+..+.|
T Consensus 70 lIDATHPyA----------a~iS~Na~~aake~gipy~r~ 99 (257)
T COG2099 70 LIDATHPYA----------ARISQNAARAAKETGIPYLRL 99 (257)
T ss_pred EEECCChHH----------HHHHHHHHHHHHHhCCcEEEE
Confidence 999655431 455889999999999875554
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.012 Score=53.30 Aligned_cols=105 Identities=17% Similarity=0.157 Sum_probs=65.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCch-------------------hHhhhccCCcEEEEcCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDK-------------------EETLNQLQGASVCFSDVT 146 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-------------------~~~~~~~~~v~~~~~Dl~ 146 (405)
+|||.|+ |++|.++++.|+..|. +++++|.+.-......+. +..+...-+++.+..++.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 5899997 9999999999999994 688888764222111110 001111124556667775
Q ss_pred CHHHH-HHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 147 NLESL-EKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 147 d~~~l-~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+.... ...+++ +|+||.+.. |...-+.+-+.|.+.++ .+|..++.+
T Consensus 80 ~~~~~~~~f~~~----~DvVi~a~D------------n~~aR~~ln~~c~~~~i-plI~~g~~G 126 (234)
T cd01484 80 PEQDFNDTFFEQ----FHIIVNALD------------NIIARRYVNGMLIFLIV-PLIESGTEG 126 (234)
T ss_pred hhhhchHHHHhC----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEcccC
Confidence 54333 345666 999998643 44545556667788775 477666543
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.014 Score=61.29 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=69.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCch------------------hHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDK------------------EETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~------------------~~~~~~~~~v~~~~ 142 (405)
++..+|+|.|+ | +|+.++..|+..|. ++++++.+.-......+. +..++..-+++.+.
T Consensus 105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~ 182 (722)
T PRK07877 105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT 182 (722)
T ss_pred HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence 45679999999 7 99999999999994 788888764332222221 01111112566666
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
..++ ++.+.+.+++ +|+||.|.- |+..=..+-++|.+.++ .+|+-++
T Consensus 183 ~~i~-~~n~~~~l~~----~DlVvD~~D------------~~~~R~~ln~~a~~~~i-P~i~~~~ 229 (722)
T PRK07877 183 DGLT-EDNVDAFLDG----LDVVVEECD------------SLDVKVLLREAARARRI-PVLMATS 229 (722)
T ss_pred ccCC-HHHHHHHhcC----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEcC
Confidence 6666 5778888887 999999753 33333334467888876 4666664
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.011 Score=58.86 Aligned_cols=78 Identities=18% Similarity=0.210 Sum_probs=57.1
Q ss_pred CCCCCeEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCC
Q 043385 82 NPKDINILVVGS----------------TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145 (405)
Q Consensus 82 ~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl 145 (405)
++++++||||+| ||..|.+|++++..+|++|+++.-... +....+++++. +
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-----------~~~p~~v~~i~--V 319 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-----------LADPQGVKVIH--V 319 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-----------CCCCCCceEEE--e
Confidence 578999999965 799999999999999999999874321 11224666665 4
Q ss_pred CCHHHHHHHHHhhCCCccEEEEcccccC
Q 043385 146 TNLESLEKSLENLGTSIDVVVSCLASRS 173 (405)
Q Consensus 146 ~d~~~l~~~~~~~~~~~d~Vv~~a~~~~ 173 (405)
...+++.++++... +.|++|++|+..+
T Consensus 320 ~ta~eM~~av~~~~-~~Di~I~aAAVaD 346 (475)
T PRK13982 320 ESARQMLAAVEAAL-PADIAIFAAAVAD 346 (475)
T ss_pred cCHHHHHHHHHhhC-CCCEEEEeccccc
Confidence 45666666665432 3799999998754
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.006 Score=57.12 Aligned_cols=84 Identities=12% Similarity=0.205 Sum_probs=49.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+.++++|+|.|+ |+.+++++-.|...|. +|+++.|+++.........+.+....+..+...++.+.+.+.+.+.+
T Consensus 121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 196 (288)
T PRK12749 121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALAS--- 196 (288)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhccc---
Confidence 356789999998 7779999999999985 89999998642111111111111111111112233333334444555
Q ss_pred CccEEEEccc
Q 043385 161 SIDVVVSCLA 170 (405)
Q Consensus 161 ~~d~Vv~~a~ 170 (405)
+|+|||+..
T Consensus 197 -aDivINaTp 205 (288)
T PRK12749 197 -ADILTNGTK 205 (288)
T ss_pred -CCEEEECCC
Confidence 899999754
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0088 Score=50.67 Aligned_cols=68 Identities=15% Similarity=0.207 Sum_probs=46.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++++++|+|.|| |-+|...++.|++.|++|++++.. .. +.+.....+++....+.+.+ +++
T Consensus 10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~--~~-------~~l~~l~~i~~~~~~~~~~d-----l~~---- 70 (157)
T PRK06719 10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE--IC-------KEMKELPYITWKQKTFSNDD-----IKD---- 70 (157)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc--cC-------HHHHhccCcEEEecccChhc-----CCC----
Confidence 467899999999 999999999999999999988532 21 22222345555544443322 344
Q ss_pred ccEEEEc
Q 043385 162 IDVVVSC 168 (405)
Q Consensus 162 ~d~Vv~~ 168 (405)
.|.||-+
T Consensus 71 a~lViaa 77 (157)
T PRK06719 71 AHLIYAA 77 (157)
T ss_pred ceEEEEC
Confidence 8888854
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.021 Score=53.98 Aligned_cols=108 Identities=14% Similarity=0.224 Sum_probs=72.1
Q ss_pred EEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhcc-CCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 88 ILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQL-QGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
|.|.|+ |.+|..++-.|+..| .++++++++++...+....+...... ....+..+ .| .+.+++ +|+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~----aDi 69 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAAD----ADI 69 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCC----CCE
Confidence 467887 889999999999988 68999999887654433322222221 12232221 22 235666 999
Q ss_pred EEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 165 VVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 165 Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
||.++|.... +..+....|+.-.+.+.+..++.+.+ .+|.+|
T Consensus 70 VIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s 115 (300)
T cd00300 70 VVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS 115 (300)
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 9999997542 33446778888899999999888754 444444
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.018 Score=55.92 Aligned_cols=111 Identities=18% Similarity=0.199 Sum_probs=71.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-e----EEE--E--ecCCCCcCCCCchhHhhh-c-cCCcEEEEcCCCCHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-N----VIA--I--AREKSGIRGRNDKEETLN-Q-LQGASVCFSDVTNLESLEK 153 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-~----V~~--l--~r~~~~~~~~~~~~~~~~-~-~~~v~~~~~Dl~d~~~l~~ 153 (405)
.-||.|+||+|.+|.+++-.|+..|. . |.+ + +++.+...+....+.... . ..++.+..+ | .+
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~----y~ 116 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID---P----YE 116 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC---C----HH
Confidence 36899999999999999999998862 2 333 3 777666544332222211 1 122222222 2 24
Q ss_pred HHHhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcC-CC-EEEEEc
Q 043385 154 SLENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCG-AS-HFVLLS 206 (405)
Q Consensus 154 ~~~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~-v~-~~V~~S 206 (405)
.+++ +|+||-+||.... +..+.++.|+.-.+.+.+...+.. .. .+|.+|
T Consensus 117 ~~kd----aDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs 170 (387)
T TIGR01757 117 VFED----ADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG 170 (387)
T ss_pred HhCC----CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 4666 9999999997532 344577889999999999998843 33 455555
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.024 Score=53.94 Aligned_cols=101 Identities=19% Similarity=0.281 Sum_probs=62.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh-CCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL-GTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~~~ 162 (405)
.+.+|||+||+|.+|..+++.+...|.+|+++++++++. +.+... ++..+ .|..+.+ +.+.++.. .+++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~-------~~l~~~-Ga~~v-i~~~~~~-~~~~v~~~~~~gv 212 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV-------AWLKEL-GFDAV-FNYKTVS-LEEALKEAAPDGI 212 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHc-CCCEE-EeCCCcc-HHHHHHHHCCCCc
Confidence 467999999999999999999888999999998877543 223332 33222 2333332 22222211 1359
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
|+|+++.|.. .....++.++.. ++||.++...
T Consensus 213 d~vld~~g~~-------------~~~~~~~~l~~~--G~iv~~g~~~ 244 (329)
T cd08294 213 DCYFDNVGGE-------------FSSTVLSHMNDF--GRVAVCGSIS 244 (329)
T ss_pred EEEEECCCHH-------------HHHHHHHhhccC--CEEEEEcchh
Confidence 9999987631 123344444433 4788776543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.027 Score=53.48 Aligned_cols=97 Identities=27% Similarity=0.339 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+++|+|+|+. ++|..-++.+.+.|++|++++|++++. +....+ +...+. |-+|++.+...-+. +|
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~-------e~a~~l-GAd~~i-~~~~~~~~~~~~~~----~d 231 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKL-------ELAKKL-GADHVI-NSSDSDALEAVKEI----AD 231 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHH-------HHHHHh-CCcEEE-EcCCchhhHHhHhh----Cc
Confidence 46899999995 999999998888999999999999875 223333 233332 22256655554444 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
++|.+++ .. .....+++++..| ++|.++-..
T Consensus 232 ~ii~tv~-~~------------~~~~~l~~l~~~G--~~v~vG~~~ 262 (339)
T COG1064 232 AIIDTVG-PA------------TLEPSLKALRRGG--TLVLVGLPG 262 (339)
T ss_pred EEEECCC-hh------------hHHHHHHHHhcCC--EEEEECCCC
Confidence 9999887 21 1233555556544 788887664
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.009 Score=56.25 Aligned_cols=71 Identities=25% Similarity=0.417 Sum_probs=51.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
...+++|+|.|. |.+|+.++..|.+.|.+|++++|+++.. ...... +.+++ +.+.+.+.+++
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~-------~~~~~~-G~~~~-----~~~~l~~~l~~---- 210 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL-------ARITEM-GLSPF-----HLSELAEEVGK---- 210 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHc-CCeee-----cHHHHHHHhCC----
Confidence 346789999998 8899999999999999999999986532 112222 33332 23456677776
Q ss_pred ccEEEEccc
Q 043385 162 IDVVVSCLA 170 (405)
Q Consensus 162 ~d~Vv~~a~ 170 (405)
+|+||++++
T Consensus 211 aDiVI~t~p 219 (296)
T PRK08306 211 IDIIFNTIP 219 (296)
T ss_pred CCEEEECCC
Confidence 999999754
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0077 Score=61.38 Aligned_cols=40 Identities=20% Similarity=0.220 Sum_probs=35.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
+.++++|+|+|+ |++|++++..|++.|++|+++.|+.++.
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a 415 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERA 415 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 356789999999 8999999999999999999999976543
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0096 Score=57.91 Aligned_cols=75 Identities=13% Similarity=0.249 Sum_probs=55.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+.+|+|+|+ |.+|...++.|.+.|.+|++++|++++. +.+...-+ ..+..+..+.+.+.+.+.+ +|
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~-------~~l~~~~g-~~v~~~~~~~~~l~~~l~~----aD 232 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRL-------RQLDAEFG-GRIHTRYSNAYEIEDAVKR----AD 232 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHH-------HHHHHhcC-ceeEeccCCHHHHHHHHcc----CC
Confidence 4567999988 9999999999999999999999987543 11211111 1233456677888888887 99
Q ss_pred EEEEcccc
Q 043385 164 VVVSCLAS 171 (405)
Q Consensus 164 ~Vv~~a~~ 171 (405)
+||++++.
T Consensus 233 vVI~a~~~ 240 (370)
T TIGR00518 233 LLIGAVLI 240 (370)
T ss_pred EEEEcccc
Confidence 99998754
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.011 Score=61.44 Aligned_cols=73 Identities=25% Similarity=0.470 Sum_probs=58.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
.++|+|.|. |-+|+.+++.|.++|+++++++.++++. +.... .+..++.||.+|++.++++=- +++|.
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v-------~~~~~-~g~~v~~GDat~~~~L~~agi---~~A~~ 467 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHI-------ETLRK-FGMKVFYGDATRMDLLESAGA---AKAEV 467 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHH-------HHHHh-cCCeEEEEeCCCHHHHHhcCC---CcCCE
Confidence 357999998 9999999999999999999999998754 33333 478999999999998876421 24899
Q ss_pred EEEcc
Q 043385 165 VVSCL 169 (405)
Q Consensus 165 Vv~~a 169 (405)
||-+.
T Consensus 468 vvv~~ 472 (621)
T PRK03562 468 LINAI 472 (621)
T ss_pred EEEEe
Confidence 98754
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.016 Score=57.20 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=71.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC---C----CeEEEEecC--CCCcCCCCchhHhhh-c-cCCcEEEEcCCCCHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR---G----FNVIAIARE--KSGIRGRNDKEETLN-Q-LQGASVCFSDVTNLESLEK 153 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~---g----~~V~~l~r~--~~~~~~~~~~~~~~~-~-~~~v~~~~~Dl~d~~~l~~ 153 (405)
.-+|+||||+|.||-+|+-.+++- | ..+++++.. .+.+.+..-.+.... . ..++.+.. | -.+
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-~------~~e 195 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-D------LDV 195 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-C------CHH
Confidence 468999999999999999988873 4 236667763 333332221111111 1 12333332 1 145
Q ss_pred HHHhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCC--CEEEEEcc
Q 043385 154 SLENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGA--SHFVLLSA 207 (405)
Q Consensus 154 ~~~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v--~~~V~~Ss 207 (405)
++++ +|+||-++|.... +..+..+.|..-.+.+.++..+.+- .+++.+.|
T Consensus 196 a~~d----aDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 196 AFKD----AHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred HhCC----CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 6777 9999999987532 3445788899999999999888765 45655554
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.02 Score=54.24 Aligned_cols=69 Identities=23% Similarity=0.401 Sum_probs=52.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
...+++|.|.|- |.||+.+++.|..-|++|++.+|..... +++..+ ...+++.+++++
T Consensus 133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~-------------~~~~~~----~~~~~l~e~l~~---- 190 (312)
T PRK15469 133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSW-------------PGVQSF----AGREELSAFLSQ---- 190 (312)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCC-------------CCceee----cccccHHHHHhc----
Confidence 467889999988 9999999999999999999999865431 122211 124568888988
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
+|+|+.+....
T Consensus 191 aDvvv~~lPlt 201 (312)
T PRK15469 191 TRVLINLLPNT 201 (312)
T ss_pred CCEEEECCCCC
Confidence 99999887644
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.015 Score=56.97 Aligned_cols=110 Identities=15% Similarity=0.106 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCch-------------------hHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDK-------------------EETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-------------------~~~~~~~~~v~~~~ 142 (405)
++..+|+|.|+ |++|..+++.|+..|. +++++|.+.-......+. +..+...-+++.+.
T Consensus 36 L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~ 114 (390)
T PRK07411 36 LKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYE 114 (390)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEe
Confidence 45678999999 8899999999999994 688888754222211110 01111112455555
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
..++. +...+.+.+ +|+||.|.. |...-..+-++|.+.++ .+|+.+..+-+
T Consensus 115 ~~~~~-~~~~~~~~~----~D~Vvd~~d------------~~~~r~~ln~~~~~~~~-p~v~~~~~g~~ 165 (390)
T PRK07411 115 TRLSS-ENALDILAP----YDVVVDGTD------------NFPTRYLVNDACVLLNK-PNVYGSIFRFE 165 (390)
T ss_pred cccCH-HhHHHHHhC----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEEEccCE
Confidence 55554 345667777 999999754 23333335567787775 57776655443
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.011 Score=58.15 Aligned_cols=38 Identities=16% Similarity=0.146 Sum_probs=34.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
++|+|||||+...+|..+++.|.+.|++|++++.++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 45899999999999999999999999999999987643
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0074 Score=52.90 Aligned_cols=67 Identities=24% Similarity=0.203 Sum_probs=43.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|++.| ||+|.||..++++|.+.||+|++-.|+.++.. ......-+..+ ...+..++.+. .|+|
T Consensus 2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~------~a~a~~l~~~i------~~~~~~dA~~~----aDVV 64 (211)
T COG2085 2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKAL------AAAAAALGPLI------TGGSNEDAAAL----ADVV 64 (211)
T ss_pred cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHH------HHHHHhhcccc------ccCChHHHHhc----CCEE
Confidence 44554 77799999999999999999999977665431 11111111111 12335566776 8999
Q ss_pred EEcc
Q 043385 166 VSCL 169 (405)
Q Consensus 166 v~~a 169 (405)
|-..
T Consensus 65 vLAV 68 (211)
T COG2085 65 VLAV 68 (211)
T ss_pred EEec
Confidence 9643
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.031 Score=53.67 Aligned_cols=98 Identities=18% Similarity=0.260 Sum_probs=59.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+|||+||+|.+|..+++.+...|. +|+++++++++. +.+.. . ++..+ .|..+.+ +.+.+.... +++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~-------~~~~~~l-Ga~~v-i~~~~~~-~~~~i~~~~~~gv 225 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKC-------QLLKSEL-GFDAA-INYKTDN-VAERLRELCPEGV 225 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHH-------HHHHHhc-CCcEE-EECCCCC-HHHHHHHHCCCCc
Confidence 7999999999999999998888898 799998876543 22211 2 33222 2332221 222222111 359
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
|+||++.|.. .....++.++.. +++|.++..
T Consensus 226 d~vid~~g~~-------------~~~~~~~~l~~~--G~iv~~G~~ 256 (345)
T cd08293 226 DVYFDNVGGE-------------ISDTVISQMNEN--SHIILCGQI 256 (345)
T ss_pred eEEEECCCcH-------------HHHHHHHHhccC--CEEEEEeee
Confidence 9999987631 123344445544 478877643
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.017 Score=57.47 Aligned_cols=36 Identities=33% Similarity=0.642 Sum_probs=33.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
|+|+|+||+|.+|..+++.|.+.|++|++++|+++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~ 36 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKK 36 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence 589999999999999999999999999999998654
|
|
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.046 Score=50.95 Aligned_cols=106 Identities=19% Similarity=0.183 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCc-------------------hhHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRND-------------------KEETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~-------------------~~~~~~~~~~v~~~~ 142 (405)
+...+|||.|+ |++|..+++.|+..|. +|+++|.+.-......+ .+..++..-.++.+.
T Consensus 17 L~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~ 95 (286)
T cd01491 17 LQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVST 95 (286)
T ss_pred HhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 44578999999 8899999999999994 68888876432221111 111222222344444
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
.+++ .+.+.+ +|+||.+.. |......+-++|++.++ .||...+.+.+
T Consensus 96 ~~~~-----~~~l~~----fdvVV~~~~------------~~~~~~~in~~c~~~~i-pfI~a~~~G~~ 142 (286)
T cd01491 96 GPLT-----TDELLK----FQVVVLTDA------------SLEDQLKINEFCHSPGI-KFISADTRGLF 142 (286)
T ss_pred ccCC-----HHHHhc----CCEEEEecC------------CHHHHHHHHHHHHHcCC-EEEEEeccccE
Confidence 4422 234555 899987642 33444456678888886 68777766554
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.019 Score=61.54 Aligned_cols=110 Identities=14% Similarity=0.166 Sum_probs=69.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCc-------------------hhHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRND-------------------KEETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~-------------------~~~~~~~~~~v~~~~ 142 (405)
++..+|+|.|+ |++|+.++..|+..|. ++++++.+.-......+ .+..++..-+++.+.
T Consensus 330 L~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~ 408 (989)
T PRK14852 330 LLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP 408 (989)
T ss_pred HhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence 45679999997 8999999999999994 67777765422211111 011112122455555
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
..+ +.+.+.+.+++ +|+||.+.-.. ....-+.+.+.|.+.++ .+|+.++.+
T Consensus 409 ~~I-~~en~~~fl~~----~DiVVDa~D~~----------~~~~rr~l~~~c~~~~I-P~I~ag~~G 459 (989)
T PRK14852 409 EGV-AAETIDAFLKD----VDLLVDGIDFF----------ALDIRRRLFNRALELGI-PVITAGPLG 459 (989)
T ss_pred cCC-CHHHHHHHhhC----CCEEEECCCCc----------cHHHHHHHHHHHHHcCC-CEEEeeccc
Confidence 555 44668888887 99999865321 12234567778888887 466666533
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.016 Score=54.77 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=68.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhcc--CCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQL--QGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
|+|.|.|+ |.+|..++..|+.+|+ +|+++++.++...+........... ....+.. -.| +.+ +++ +
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~--t~d---~~~-~~~----a 70 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG--TNN---YAD-TAN----S 70 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe--cCC---HHH-hCC----C
Confidence 68999998 9999999999999886 8999999655332110000000000 0111111 012 222 455 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
|+||-++|.... ...+....|..-.+.+++...+.+-+ .+|.+|
T Consensus 71 DiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t 118 (305)
T TIGR01763 71 DIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS 118 (305)
T ss_pred CEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999999986532 22346678999899999888877543 455555
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0098 Score=45.65 Aligned_cols=67 Identities=24% Similarity=0.418 Sum_probs=44.3
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC---CeEEEE-ecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 87 NILVVGSTGYIGKFVVEELVSRG---FNVIAI-AREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g---~~V~~l-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
||.|.|+ |.+|.++++.|++.| ++|... +|++++. ..+...-++.+...| ..++++. .
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~----a 62 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKA-------AELAKEYGVQATADD------NEEAAQE----A 62 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHH-------HHHHHHCTTEEESEE------HHHHHHH----T
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHH-------HHHHHhhccccccCC------hHHhhcc----C
Confidence 5777755 999999999999999 899955 8888764 222222233333222 4455666 8
Q ss_pred cEEEEcccc
Q 043385 163 DVVVSCLAS 171 (405)
Q Consensus 163 d~Vv~~a~~ 171 (405)
|+||.+.-+
T Consensus 63 dvvilav~p 71 (96)
T PF03807_consen 63 DVVILAVKP 71 (96)
T ss_dssp SEEEE-S-G
T ss_pred CEEEEEECH
Confidence 999986543
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.034 Score=53.65 Aligned_cols=102 Identities=17% Similarity=0.277 Sum_probs=61.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhh-CCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENL-GTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~-~~~ 161 (405)
.+.+|||+||+|.+|..+++.+...|.+|+++++++++. +.+. .. ++..+. |..+.+.+.+.+... .++
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~-------~~~~~~l-Ga~~vi-~~~~~~~~~~~i~~~~~~g 228 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV-------DLLKNKL-GFDEAF-NYKEEPDLDAALKRYFPEG 228 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHH-------HHHHHhc-CCCEEE-ECCCcccHHHHHHHHCCCC
Confidence 467999999999999999998888899999888776543 2222 22 332222 332221233222211 135
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+||++.|.. .....++.++.. +++|.++...
T Consensus 229 vD~v~d~vG~~-------------~~~~~~~~l~~~--G~iv~~G~~~ 261 (348)
T PLN03154 229 IDIYFDNVGGD-------------MLDAALLNMKIH--GRIAVCGMVS 261 (348)
T ss_pred cEEEEECCCHH-------------HHHHHHHHhccC--CEEEEECccc
Confidence 99999987721 123344444443 4788776543
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.22 Score=50.26 Aligned_cols=154 Identities=19% Similarity=0.143 Sum_probs=94.2
Q ss_pred CCCCCCeEEEEcCC-ChhHHHHHHHHHhCCCeEEEEecCCCCcC-CCCchh--HhhhccCCcEEEEcCCCCHHHHHHHHH
Q 043385 81 KNPKDINILVVGST-GYIGKFVVEELVSRGFNVIAIAREKSGIR-GRNDKE--ETLNQLQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 81 ~~~~~~~vlVtGat-G~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~--~~~~~~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
....++.+|||||+ |-||..++..|++-|..|++.+-+-+... ...+.+ +........-+|..+.....+++.+++
T Consensus 392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe 471 (866)
T COG4982 392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE 471 (866)
T ss_pred CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence 34667899999987 88999999999999999998876544321 000000 000001234556677766666666665
Q ss_pred hhC-----------------CCccEEEEcccccCCC-C-------cchhHhHHHHHHHHHHHHHhc----CCC---EEEE
Q 043385 157 NLG-----------------TSIDVVVSCLASRSGG-V-------KDSWKIDYEANRNSLVAGRNC----GAS---HFVL 204 (405)
Q Consensus 157 ~~~-----------------~~~d~Vv~~a~~~~~~-~-------~~~~~~n~~g~~~ll~aa~~~----~v~---~~V~ 204 (405)
-+. -..|.+|-.|++...+ . +..+++-+.....+|-..+.. |+. |+|.
T Consensus 472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVL 551 (866)
T COG4982 472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVL 551 (866)
T ss_pred HhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEe
Confidence 331 1367777777754321 1 113344344444555444433 332 6777
Q ss_pred Eccccc--cCCChhHHHHHHHHHHHHHHHhhh
Q 043385 205 LSAICV--QKPLLEFQRAKLKFEAEMMKVAEE 234 (405)
Q Consensus 205 ~Ss~~~--~~~~~~y~~sK~~~E~~~~~~~~~ 234 (405)
..|..- +.....|+.+|...|.++..+..|
T Consensus 552 PgSPNrG~FGgDGaYgEsK~aldav~~RW~sE 583 (866)
T COG4982 552 PGSPNRGMFGGDGAYGESKLALDAVVNRWHSE 583 (866)
T ss_pred cCCCCCCccCCCcchhhHHHHHHHHHHHhhcc
Confidence 777543 355678999999999999988775
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.04 Score=52.77 Aligned_cols=99 Identities=23% Similarity=0.376 Sum_probs=57.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHh-CCCe---EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVS-RGFN---VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~---V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+++|.|.||||++|+.+++.|.+ ...+ +..+........ .+ ...+-....-++ |++. +++
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk-------~~-~~~~~~l~v~~~-~~~~----~~~-- 68 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGK-------TV-QFKGREIIIQEA-KINS----FEG-- 68 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCC-------Ce-eeCCcceEEEeC-CHHH----hcC--
Confidence 347899999999999999999995 4555 555554322111 11 111112222222 3332 345
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP 213 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~ 213 (405)
+|+||.+++. ...+.+...+.+.|. .+|=.|+..-..+
T Consensus 69 --~Divf~a~~~-------------~~s~~~~~~~~~~G~-~VID~Ss~fR~~~ 106 (347)
T PRK06728 69 --VDIAFFSAGG-------------EVSRQFVNQAVSSGA-IVIDNTSEYRMAH 106 (347)
T ss_pred --CCEEEECCCh-------------HHHHHHHHHHHHCCC-EEEECchhhcCCC
Confidence 8999987652 234556666666664 5666676654433
|
|
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.041 Score=44.05 Aligned_cols=85 Identities=21% Similarity=0.359 Sum_probs=52.7
Q ss_pred CeEEEEcCC---ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGST---GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
|+|.|.|++ +..|..+.+.|.+.|++|+.+.-+.... .+...+ -++.| .. +.+
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i-------------~G~~~y-~sl~e-------~p---~~i 56 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEI-------------LGIKCY-PSLAE-------IP---EPI 56 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEE-------------TTEE-B-SSGGG-------CS---ST-
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEE-------------CcEEee-ccccC-------CC---CCC
Confidence 579999998 7789999999999999999885444321 122221 23322 11 248
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
|.++.+.. -..+..+++.|.+.|++.+++.++
T Consensus 57 Dlavv~~~-------------~~~~~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 57 DLAVVCVP-------------PDKVPEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp SEEEE-S--------------HHHHHHHHHHHHHHT-SEEEE-TT
T ss_pred CEEEEEcC-------------HHHHHHHHHHHHHcCCCEEEEEcc
Confidence 99887643 345667888888889999998887
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.013 Score=51.82 Aligned_cols=73 Identities=12% Similarity=0.144 Sum_probs=48.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++++++|+|.|| |-+|...++.|++.|++|+++++...+. +..+.....+.+..-++.+ ..+++
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~------l~~l~~~~~i~~~~~~~~~-----~~l~~---- 70 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTEN------LVKLVEEGKIRWKQKEFEP-----SDIVD---- 70 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHH------HHHHHhCCCEEEEecCCCh-----hhcCC----
Confidence 467899999999 9999999999999999999997643211 1122222345665543332 22445
Q ss_pred ccEEEEccc
Q 043385 162 IDVVVSCLA 170 (405)
Q Consensus 162 ~d~Vv~~a~ 170 (405)
+|+||-+.+
T Consensus 71 adlViaaT~ 79 (202)
T PRK06718 71 AFLVIAATN 79 (202)
T ss_pred ceEEEEcCC
Confidence 899986543
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.018 Score=54.30 Aligned_cols=34 Identities=21% Similarity=0.436 Sum_probs=27.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-FNVIAIARE 118 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~ 118 (405)
+.+|.|.||||++|..+++.|.++. .++..+..+
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~ 36 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEA 36 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence 5789999999999999999998886 355555543
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.027 Score=52.32 Aligned_cols=103 Identities=18% Similarity=0.224 Sum_probs=68.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.++.|.|+|+.| +|.-=++.-.+-|++|+++++...+.+ +..+.+ +.+++..-..|++.++++.+. .|
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kke------ea~~~L-GAd~fv~~~~d~d~~~~~~~~----~d 248 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKE------EAIKSL-GADVFVDSTEDPDIMKAIMKT----TD 248 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHH------HHHHhc-CcceeEEecCCHHHHHHHHHh----hc
Confidence 578999999988 998888877777999999999875432 445554 666666444478877776665 55
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
.++|++..... .....++..++..| ++|+++-...
T Consensus 249 g~~~~v~~~a~----------~~~~~~~~~lk~~G--t~V~vg~p~~ 283 (360)
T KOG0023|consen 249 GGIDTVSNLAE----------HALEPLLGLLKVNG--TLVLVGLPEK 283 (360)
T ss_pred Ccceeeeeccc----------cchHHHHHHhhcCC--EEEEEeCcCC
Confidence 55554431110 01223555566544 7898886654
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.049 Score=51.80 Aligned_cols=102 Identities=20% Similarity=0.232 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh-CCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL-GTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~~~ 162 (405)
.+.+|+|.|++|.+|..+++.+.+.|.+|+++++++++. +.+... ++..+ .|..+.+ +.+.+... .+.+
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~-------~~~~~~-g~~~v-~~~~~~~-~~~~~~~~~~~~v 208 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKA-------EFLKSL-GCDRP-INYKTED-LGEVLKKEYPKGV 208 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHH-------HHHHHc-CCceE-EeCCCcc-HHHHHHHhcCCCC
Confidence 467899999999999999998888999999998876543 222222 22221 1222222 22222111 1358
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
|.|+++.|. ......++.++.. +++|.+++...
T Consensus 209 d~v~~~~g~-------------~~~~~~~~~l~~~--g~~v~~g~~~~ 241 (329)
T cd08250 209 DVVYESVGG-------------EMFDTCVDNLALK--GRLIVIGFISG 241 (329)
T ss_pred eEEEECCcH-------------HHHHHHHHHhccC--CeEEEEecccC
Confidence 999998762 1233344444443 48988876654
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.025 Score=59.17 Aligned_cols=107 Identities=15% Similarity=0.228 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCch-------------------hHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDK-------------------EETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-------------------~~~~~~~~~v~~~~ 142 (405)
++..+|+|.|+ |++|+.+++.|+..|. ++++++.+.-......+. +..+...-+++.+.
T Consensus 41 L~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~ 119 (679)
T PRK14851 41 LAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP 119 (679)
T ss_pred HhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence 45679999997 8999999999999994 677777653222111110 01111122566677
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
..++ .+.+.+.+++ +|+||.+.-.. .+..-..+.+.|.+.++. +|+.+
T Consensus 120 ~~i~-~~n~~~~l~~----~DvVid~~D~~----------~~~~r~~l~~~c~~~~iP-~i~~g 167 (679)
T PRK14851 120 AGIN-ADNMDAFLDG----VDVVLDGLDFF----------QFEIRRTLFNMAREKGIP-VITAG 167 (679)
T ss_pred cCCC-hHHHHHHHhC----CCEEEECCCCC----------cHHHHHHHHHHHHHCCCC-EEEee
Confidence 7775 4567888888 99999865321 122334566788888874 66554
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.043 Score=55.31 Aligned_cols=108 Identities=17% Similarity=0.153 Sum_probs=67.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH---------------
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL--------------- 148 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--------------- 148 (405)
.+.+|+|+|+ |-+|...+..+...|.+|+++++++++. +..+.. +.+++..|..+.
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rl-------e~aesl-GA~~v~i~~~e~~~~~~gya~~~s~~~ 234 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVA-------EQVESM-GAEFLELDFEEEGGSGDGYAKVMSEEF 234 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHc-CCeEEEeccccccccccchhhhcchhH
Confidence 4679999999 9999999999999999999999998764 233333 555444443221
Q ss_pred -HHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 149 -ESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 149 -~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+...+.+.+...++|+||.+++......... -++..++.++.. .++|.++..
T Consensus 235 ~~~~~~~~~~~~~gaDVVIetag~pg~~aP~l------it~~~v~~mkpG--gvIVdvg~~ 287 (509)
T PRK09424 235 IKAEMALFAEQAKEVDIIITTALIPGKPAPKL------ITAEMVASMKPG--SVIVDLAAE 287 (509)
T ss_pred HHHHHHHHHhccCCCCEEEECCCCCcccCcch------HHHHHHHhcCCC--CEEEEEccC
Confidence 1122232221134999999998643211111 134455555543 368888753
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0091 Score=58.79 Aligned_cols=75 Identities=16% Similarity=0.363 Sum_probs=54.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+..+++|+|.|+ |..|+.++..|.+.| .+|+++.|+.++.. .+.. ..... ....+.+.+.+..
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~-------~La~~~~~~~-----~~~~~~l~~~l~~-- 242 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQ-------KITSAFRNAS-----AHYLSELPQLIKK-- 242 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHH-------HHHHHhcCCe-----EecHHHHHHHhcc--
Confidence 467789999999 999999999999999 47999999876542 2221 11122 2234556777776
Q ss_pred CCccEEEEcccccC
Q 043385 160 TSIDVVVSCLASRS 173 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~ 173 (405)
+|+||++.+...
T Consensus 243 --aDiVI~aT~a~~ 254 (414)
T PRK13940 243 --ADIIIAAVNVLE 254 (414)
T ss_pred --CCEEEECcCCCC
Confidence 999999887643
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0071 Score=56.58 Aligned_cols=39 Identities=26% Similarity=0.365 Sum_probs=34.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGI 122 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~ 122 (405)
.++++|+|.|+ |+.|++++..|.+.|. +|+++.|+.++.
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka 162 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKL 162 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence 46789999998 9999999999999995 799999987654
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.014 Score=55.72 Aligned_cols=92 Identities=21% Similarity=0.318 Sum_probs=65.9
Q ss_pred CccEEEEcccccCCCC----cchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc--CCChhHHHHHHHHHHHHHH
Q 043385 161 SIDVVVSCLASRSGGV----KDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ--KPLLEFQRAKLKFEAEMMK 230 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~----~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~--~~~~~y~~sK~~~E~~~~~ 230 (405)
+++.+|++.|...... .....+++.-+..++++.. +.+.|++|.++|.+.. ....+|..+|.+.|+.+..
T Consensus 203 ~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~~~~s~~f~Yfk~K~~LE~dl~~ 282 (410)
T PF08732_consen 203 DIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNNNAISSMFPYFKTKGELENDLQN 282 (410)
T ss_pred hhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCcchhhhhhhhhHHHHHHHHHHHh
Confidence 4889999988754211 1222444445555666655 6778999999999876 4567999999999999887
Q ss_pred HhhhcCCceEEEEecCCcccCch
Q 043385 231 VAEEDSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 231 ~~~~~~gi~~~ilRp~~v~g~~~ 253 (405)
.-. ..--..+|+|||.+.|...
T Consensus 283 ~l~-~~l~~lvILRPGplvG~h~ 304 (410)
T PF08732_consen 283 LLP-PKLKHLVILRPGPLVGEHG 304 (410)
T ss_pred hcc-cccceEEEecCccccCCCC
Confidence 543 1124789999999999643
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.023 Score=55.37 Aligned_cols=68 Identities=19% Similarity=0.362 Sum_probs=53.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+++|+|.|+ |.+|+.++..+.+.|++|++++.++.... ... .-..+.+|..|.+.+.++++. +|+
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa------~~~----ad~~~~~~~~D~~~l~~~a~~----~dv 66 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPA------AQV----ADEVIVADYDDVAALRELAEQ----CDV 66 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCch------hHh----CceEEecCCCCHHHHHHHHhc----CCE
Confidence 468999999 89999999999999999999998765421 111 124566899999999999887 898
Q ss_pred EEE
Q 043385 165 VVS 167 (405)
Q Consensus 165 Vv~ 167 (405)
|..
T Consensus 67 it~ 69 (372)
T PRK06019 67 ITY 69 (372)
T ss_pred EEe
Confidence 753
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.029 Score=43.83 Aligned_cols=90 Identities=22% Similarity=0.225 Sum_probs=58.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+.++++|||+|| |.+|..=++.|++.|.+|++++..... .+ ..+++..-++. +.+++
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~----------~~--~~i~~~~~~~~------~~l~~---- 60 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEF----------SE--GLIQLIRREFE------EDLDG---- 60 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHH----------HH--TSCEEEESS-G------GGCTT----
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhh----------hh--hHHHHHhhhHH------HHHhh----
Confidence 467899999999 999999999999999999999987410 11 24555554431 22555
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+|.||-+.+ |-.-...+.+.|++.++ +|+++..
T Consensus 61 ~~lV~~at~------------d~~~n~~i~~~a~~~~i--~vn~~D~ 93 (103)
T PF13241_consen 61 ADLVFAATD------------DPELNEAIYADARARGI--LVNVVDD 93 (103)
T ss_dssp ESEEEE-SS-------------HHHHHHHHHHHHHTTS--EEEETT-
T ss_pred heEEEecCC------------CHHHHHHHHHHHhhCCE--EEEECCC
Confidence 898885432 12234557777887764 7766654
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.015 Score=54.20 Aligned_cols=37 Identities=19% Similarity=0.199 Sum_probs=33.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR 117 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r 117 (405)
.+.++++|+|.|++|.+|+.++..|+++|..|+++.|
T Consensus 155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~ 191 (283)
T PRK14192 155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS 191 (283)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 3578899999999999999999999999999998877
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.039 Score=53.84 Aligned_cols=35 Identities=20% Similarity=0.490 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE 118 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~ 118 (405)
..++|.|.||.|.+|..+++.|.++|++|++.+|+
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence 45789999999999999999999999999999985
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.021 Score=49.51 Aligned_cols=72 Identities=25% Similarity=0.356 Sum_probs=50.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
....+++|.|.|. |.||+.+++.|..-|.+|++.+|..... ..... .++. ..+++++++.
T Consensus 32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~-------~~~~~-~~~~--------~~~l~ell~~--- 91 (178)
T PF02826_consen 32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE-------EGADE-FGVE--------YVSLDELLAQ--- 91 (178)
T ss_dssp S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH-------HHHHH-TTEE--------ESSHHHHHHH---
T ss_pred cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh-------hhccc-ccce--------eeehhhhcch---
Confidence 3567899999988 9999999999999999999999987532 10111 1221 2347788888
Q ss_pred CccEEEEcccccC
Q 043385 161 SIDVVVSCLASRS 173 (405)
Q Consensus 161 ~~d~Vv~~a~~~~ 173 (405)
+|+|+.+.....
T Consensus 92 -aDiv~~~~plt~ 103 (178)
T PF02826_consen 92 -ADIVSLHLPLTP 103 (178)
T ss_dssp --SEEEE-SSSST
T ss_pred -hhhhhhhhcccc
Confidence 999998877543
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.016 Score=57.40 Aligned_cols=74 Identities=24% Similarity=0.458 Sum_probs=52.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
...+++|+|.|+ |.+|..+++.|.+.| .+|++++|+.++.. ...... +...+ +.+++.+.+.+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~------~la~~~-g~~~i-----~~~~l~~~l~~--- 240 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAE------DLAKEL-GGEAV-----KFEDLEEYLAE--- 240 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHH------HHHHHc-CCeEe-----eHHHHHHHHhh---
Confidence 356789999998 999999999999999 78999999876431 111111 22222 23456777777
Q ss_pred CccEEEEccccc
Q 043385 161 SIDVVVSCLASR 172 (405)
Q Consensus 161 ~~d~Vv~~a~~~ 172 (405)
+|+||.+.+..
T Consensus 241 -aDvVi~aT~s~ 251 (417)
T TIGR01035 241 -ADIVISSTGAP 251 (417)
T ss_pred -CCEEEECCCCC
Confidence 99999986643
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.041 Score=52.69 Aligned_cols=99 Identities=23% Similarity=0.291 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH--HHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL--ESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~~l~~~~~~~~~ 160 (405)
.+.+|+|+|+ |.+|..+++.+...|.+ |+++++++++. +..... ++..+ .|..+. +.+.+...+ .
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~-------~~~~~~-ga~~~-i~~~~~~~~~~~~~~~~--~ 230 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERL-------ELAKAL-GADFV-INSGQDDVQEIRELTSG--A 230 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-------HHHHHh-CCCEE-EcCCcchHHHHHHHhCC--C
Confidence 4789999986 99999999999889988 99988876543 222222 33222 233332 333333332 2
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
++|+||++.|.. ......++.++.. +++|.++..
T Consensus 231 ~~d~vid~~g~~------------~~~~~~~~~l~~~--G~~v~~g~~ 264 (339)
T cd08239 231 GADVAIECSGNT------------AARRLALEAVRPW--GRLVLVGEG 264 (339)
T ss_pred CCCEEEECCCCH------------HHHHHHHHHhhcC--CEEEEEcCC
Confidence 599999987732 1122344555544 478887754
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.033 Score=53.59 Aligned_cols=98 Identities=16% Similarity=0.224 Sum_probs=61.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.+.+|+|+|+ |.+|...++.+...|. +|+++++++++. +....+ +...+ .|..+.+ +.+..+. .+.+
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~-------~~a~~l-Ga~~v-i~~~~~~-~~~~~~~-~g~~ 236 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSL-------SLAREM-GADKL-VNPQNDD-LDHYKAE-KGYF 236 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHH-------HHHHHc-CCcEE-ecCCccc-HHHHhcc-CCCC
Confidence 4679999986 9999999998888897 688899887654 222333 33322 2443322 3333322 1348
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
|+||.+.|.. ......++.++.. +++|.++.
T Consensus 237 D~vid~~G~~------------~~~~~~~~~l~~~--G~iv~~G~ 267 (343)
T PRK09880 237 DVSFEVSGHP------------SSINTCLEVTRAK--GVMVQVGM 267 (343)
T ss_pred CEEEECCCCH------------HHHHHHHHHhhcC--CEEEEEcc
Confidence 9999998742 1233445555544 47888774
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.0099 Score=55.26 Aligned_cols=39 Identities=26% Similarity=0.344 Sum_probs=34.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
..+++++|+|+ |.+|++++..|++.|++|++++|+.++.
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~ 153 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKA 153 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 34678999999 8999999999999999999999987654
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0041 Score=58.17 Aligned_cols=75 Identities=17% Similarity=0.230 Sum_probs=49.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
...+++|+|.|+ |+.|++++..|.+.|. +|++++|+.++..... +.+.. .+.+.+.. + +.+.+.+.+
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la---~~l~~~~~~~~~~~--~---~~~~~~~~~-- 192 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALA---DELNARFPAARATA--G---SDLAAALAA-- 192 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH---HHHHhhCCCeEEEe--c---cchHhhhCC--
Confidence 345689999999 8899999999999996 7999999876653211 11111 12222222 1 223445555
Q ss_pred CCccEEEEcc
Q 043385 160 TSIDVVVSCL 169 (405)
Q Consensus 160 ~~~d~Vv~~a 169 (405)
+|+||++.
T Consensus 193 --aDiVInaT 200 (284)
T PRK12549 193 --ADGLVHAT 200 (284)
T ss_pred --CCEEEECC
Confidence 89999984
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.029 Score=54.04 Aligned_cols=82 Identities=17% Similarity=0.196 Sum_probs=53.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..+.+++|.|.|- |.||+.+++.|..-|.+|++.+|+..+... .... ....+..+........++.+++..
T Consensus 155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~L~ell~~-- 226 (347)
T PLN02928 155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPE-----DGLLIPNGDVDDLVDEKGGHEDIYEFAGE-- 226 (347)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhh-----hhhccccccccccccccCcccCHHHHHhh--
Confidence 3577899999998 999999999999999999999987432100 0000 000111111111134568899988
Q ss_pred CCccEEEEccccc
Q 043385 160 TSIDVVVSCLASR 172 (405)
Q Consensus 160 ~~~d~Vv~~a~~~ 172 (405)
+|+|+.++...
T Consensus 227 --aDiVvl~lPlt 237 (347)
T PLN02928 227 --ADIVVLCCTLT 237 (347)
T ss_pred --CCEEEECCCCC
Confidence 99999887654
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.045 Score=54.76 Aligned_cols=76 Identities=18% Similarity=0.195 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+.+++|+|+|+ |..|.++++.|.++|++|.+.+..+.... ...+.. ..++.+..+...+. .+.+
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~~~~-----~~~l~~~~~gi~~~~g~~~~~-----~~~~---- 67 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELKPER-----VAQIGKMFDGLVFYTGRLKDA-----LDNG---- 67 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCchh-----HHHHhhccCCcEEEeCCCCHH-----HHhC----
Confidence 45689999998 68999999999999999999987654311 112222 13677766653321 2345
Q ss_pred ccEEEEcccccC
Q 043385 162 IDVVVSCLASRS 173 (405)
Q Consensus 162 ~d~Vv~~a~~~~ 173 (405)
+|.||...|..+
T Consensus 68 ~d~vv~spgi~~ 79 (445)
T PRK04308 68 FDILALSPGISE 79 (445)
T ss_pred CCEEEECCCCCC
Confidence 899999888764
|
|
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.048 Score=51.81 Aligned_cols=101 Identities=18% Similarity=0.163 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHH---HHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLES---LEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---l~~~~~~~~~ 160 (405)
.+.+|+|+|++|.+|..+++.+.+.|.+|+++++++++. +.+...-++.. ..|..+.+. +.+... +
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~-------~~~~~~~g~~~-~~~~~~~~~~~~v~~~~~---~ 213 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKC-------RWLVEELGFDA-AINYKTPDLAEALKEAAP---D 213 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHhhcCCce-EEecCChhHHHHHHHhcc---C
Confidence 457999999999999999999999999999998876542 22222012211 112233222 222221 3
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
++|+++++.|.. .....++.++.. +++|.++....
T Consensus 214 ~~d~vi~~~g~~-------------~~~~~~~~l~~~--G~~v~~g~~~~ 248 (329)
T cd05288 214 GIDVYFDNVGGE-------------ILDAALTLLNKG--GRIALCGAISQ 248 (329)
T ss_pred CceEEEEcchHH-------------HHHHHHHhcCCC--ceEEEEeeccC
Confidence 599999987631 233344444443 47888876543
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.0017 Score=56.70 Aligned_cols=36 Identities=28% Similarity=0.610 Sum_probs=28.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
|+|.|.|. |++|..++..|++.|++|++++.++++.
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~~v 36 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEEKV 36 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChHHH
Confidence 68999976 9999999999999999999999987643
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.033 Score=52.46 Aligned_cols=77 Identities=26% Similarity=0.355 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHH---HHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLE---KSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~---~~~~~~~~ 160 (405)
.+++|+|+|++|.+|..+++.+.+.|.+|+++++++++. +.+... ++..+ .|..+.+... +...+ .
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~-------~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~--~ 212 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGA-------ELVRQA-GADAV-FNYRAEDLADRILAATAG--Q 212 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHc-CCCEE-EeCCCcCHHHHHHHHcCC--C
Confidence 568999999999999999999999999999999876543 222222 22222 3444433332 22222 3
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
++|.|+++++.
T Consensus 213 ~~d~vi~~~~~ 223 (325)
T cd08253 213 GVDVIIEVLAN 223 (325)
T ss_pred ceEEEEECCch
Confidence 59999998763
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.044 Score=52.03 Aligned_cols=97 Identities=22% Similarity=0.252 Sum_probs=61.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH--HHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL--ESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~~l~~~~~~~~~~~ 162 (405)
+.+|+|.|++|.+|..+++.+.+.|.+|+++++++++. +.+... ++..+ .|..+. +.+.+. .+ ..+
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~-------~~~~~~-g~~~v-~~~~~~~~~~~~~~-~~--~~~ 214 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAA-------DYLKKL-GAKEV-IPREELQEESIKPL-EK--QRW 214 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHH-------HHHHHc-CCCEE-EcchhHHHHHHHhh-cc--CCc
Confidence 56999999999999999999999999999999887653 222222 33222 222222 223332 21 359
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
|+|+++.+. ......++.++.. +++|.++..
T Consensus 215 d~vld~~g~-------------~~~~~~~~~l~~~--G~~i~~g~~ 245 (326)
T cd08289 215 AGAVDPVGG-------------KTLAYLLSTLQYG--GSVAVSGLT 245 (326)
T ss_pred CEEEECCcH-------------HHHHHHHHHhhcC--CEEEEEeec
Confidence 999998762 1233344555444 488888755
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.04 Score=52.05 Aligned_cols=108 Identities=12% Similarity=0.185 Sum_probs=66.3
Q ss_pred EEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhcc--CCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQL--QGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
|.|+|| |.+|..++..|+..|. +|++++++++...+........... ....+ ... .| . +.+++ +|+
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~~t-~d---~-~~l~d----ADi 69 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-TGT-ND---Y-EDIAG----SDV 69 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-EEc-CC---H-HHhCC----CCE
Confidence 568899 9999999999998876 9999999876432211111111111 11122 111 12 2 23666 999
Q ss_pred EEEcccccCCC---CcchhHhHHHHHHHHHHHHHhcCCCE-EEEEc
Q 043385 165 VVSCLASRSGG---VKDSWKIDYEANRNSLVAGRNCGASH-FVLLS 206 (405)
Q Consensus 165 Vv~~a~~~~~~---~~~~~~~n~~g~~~ll~aa~~~~v~~-~V~~S 206 (405)
||.+++..... ..+....|+.-.+.+++.+.+...+. +|.+|
T Consensus 70 VIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 70 VVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred EEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99998865322 12345668888888888888776544 45454
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.032 Score=50.62 Aligned_cols=95 Identities=22% Similarity=0.274 Sum_probs=57.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-Ce-EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-FN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++|.|.|++|-.|+.+++.+.+.. .+ +-+++|.+....... ...+. ++.....-+.|. +..... ++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d--~ge~~---g~~~~gv~v~~~--~~~~~~----~~ 70 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSD--AGELA---GLGLLGVPVTDD--LLLVKA----DA 70 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccc--hhhhc---cccccCceeecc--hhhccc----CC
Confidence 5799999999999999999999885 55 446667654321100 00111 111111111111 233333 49
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEE
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V 203 (405)
|++|....+ .++...++.|.++++.-+|
T Consensus 71 DV~IDFT~P-------------~~~~~~l~~~~~~~~~lVI 98 (266)
T COG0289 71 DVLIDFTTP-------------EATLENLEFALEHGKPLVI 98 (266)
T ss_pred CEEEECCCc-------------hhhHHHHHHHHHcCCCeEE
Confidence 999997543 4677888999999875444
|
|
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.052 Score=49.66 Aligned_cols=105 Identities=22% Similarity=0.259 Sum_probs=63.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+.+|+|+|+++ +|..+++.+...|.+|+++++++++. +.+... +... ..|..+.+..........+.+
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~-------~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~ 202 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKL-------ELAKEL-GADH-VIDYKEEDLEEELRLTGGGGA 202 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHH-------HHHHHh-CCce-eccCCcCCHHHHHHHhcCCCC
Confidence 3467999999998 99999999999999999999876542 222222 1111 123333332222211001459
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
|+||++++.. .....+++.++.. +++|.++.....
T Consensus 203 d~vi~~~~~~------------~~~~~~~~~l~~~--G~~v~~~~~~~~ 237 (271)
T cd05188 203 DVVIDAVGGP------------ETLAQALRLLRPG--GRIVVVGGTSGG 237 (271)
T ss_pred CEEEECCCCH------------HHHHHHHHhcccC--CEEEEEccCCCC
Confidence 9999987642 1233345555443 478888876544
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.046 Score=52.60 Aligned_cols=33 Identities=24% Similarity=0.516 Sum_probs=28.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG-FNVIAIARE 118 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~ 118 (405)
++|.|+||||++|++|++.|..++ .+|..+..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~ 34 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS 34 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence 479999999999999999998876 588877443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PLN02775 Probable dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.16 Score=47.01 Aligned_cols=94 Identities=22% Similarity=0.302 Sum_probs=57.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEE-EecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIA-IAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~-l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+|+|.|++|..|+.+++.+.+.+.++++ +++.+.... .. ...+..+......|.+ +.+.... ..+
T Consensus 12 i~V~V~Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~~~~--------~~~~~~g~~v~~~~~~dl~---~~l~~~~~~~~ 80 (286)
T PLN02775 12 IPIMVNGCTGKMGHAVAEAAVSAGLQLVPVSFTGPAGVG--------VTVEVCGVEVRLVGPSERE---AVLSSVKAEYP 80 (286)
T ss_pred CeEEEECCCChHHHHHHHHHhcCCCEEEEEecccccccc--------ccceeccceeeeecCccHH---HHHHHhhccCC
Confidence 68999999999999999999998888665 444432210 11 1112222222233433 3332210 248
Q ss_pred c-EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEE
Q 043385 163 D-VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203 (405)
Q Consensus 163 d-~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V 203 (405)
| ++|.... -..+...++.|.++|+.-+|
T Consensus 81 ~~VvIDFT~-------------P~a~~~~~~~~~~~g~~~Vv 109 (286)
T PLN02775 81 NLIVVDYTL-------------PDAVNDNAELYCKNGLPFVM 109 (286)
T ss_pred CEEEEECCC-------------hHHHHHHHHHHHHCCCCEEE
Confidence 9 8888643 34677788899999985444
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.023 Score=55.94 Aligned_cols=67 Identities=22% Similarity=0.259 Sum_probs=49.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+++|+|+|. |.||+.+++.|...|.+|+++++++.+.. . .. ..+.++. + +.+++++ +
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~------~-A~-~~G~~v~-----~---l~eal~~----a 268 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL------Q-AA-MDGFRVM-----T---MEEAAEL----G 268 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH------H-HH-hcCCEec-----C---HHHHHhC----C
Confidence 57899999998 99999999999999999999999876531 1 11 1133322 2 3456666 9
Q ss_pred cEEEEccc
Q 043385 163 DVVVSCLA 170 (405)
Q Consensus 163 d~Vv~~a~ 170 (405)
|+||.+.|
T Consensus 269 DVVI~aTG 276 (425)
T PRK05476 269 DIFVTATG 276 (425)
T ss_pred CEEEECCC
Confidence 99998765
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.018 Score=54.71 Aligned_cols=73 Identities=26% Similarity=0.447 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
..+++|+|.|+ |.+|+.+++.|...| .+|++++|++++.. ...... +... .+.+++.+.+.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~------~la~~~-g~~~-----~~~~~~~~~l~~---- 238 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE------ELAKEL-GGNA-----VPLDELLELLNE---- 238 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH------HHHHHc-CCeE-----EeHHHHHHHHhc----
Confidence 46789999998 999999999999876 68999999876532 111112 2222 233456677776
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
+|+||.+.+..
T Consensus 239 aDvVi~at~~~ 249 (311)
T cd05213 239 ADVVISATGAP 249 (311)
T ss_pred CCEEEECCCCC
Confidence 99999987754
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.03 Score=52.06 Aligned_cols=37 Identities=19% Similarity=0.328 Sum_probs=34.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE 118 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~ 118 (405)
++.+++|+|+|+++.+|+.++..|.++|..|+++.++
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~ 191 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR 191 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 5789999999999999999999999999999988764
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.017 Score=57.37 Aligned_cols=73 Identities=23% Similarity=0.473 Sum_probs=52.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
..+++|+|.|+ |.+|+.+++.|...|. +|++++|++++.. ...... +. +..+.+++.+.+.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~------~la~~~-g~-----~~~~~~~~~~~l~~---- 242 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAE------ELAEEF-GG-----EAIPLDELPEALAE---- 242 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHH------HHHHHc-CC-----cEeeHHHHHHHhcc----
Confidence 56789999998 9999999999999996 7999999876531 111111 21 22233556666776
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
+|+||.+.+..
T Consensus 243 aDvVI~aT~s~ 253 (423)
T PRK00045 243 ADIVISSTGAP 253 (423)
T ss_pred CCEEEECCCCC
Confidence 99999987643
|
|
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.054 Score=50.50 Aligned_cols=99 Identities=22% Similarity=0.243 Sum_probs=58.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH-HHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL-ESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~~~~~~~~ 161 (405)
.+.+|+|.|+ |.+|...++.+...|.+ |+++++++++. +..... +...+ .|..+. +.+.+...+ ..
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~-------~~a~~~-Ga~~~-i~~~~~~~~~~~~~~~--~g 187 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR-------ELALSF-GATAL-AEPEVLAERQGGLQNG--RG 187 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-------HHHHHc-CCcEe-cCchhhHHHHHHHhCC--CC
Confidence 5679999987 89999999988888986 88887766543 222222 23221 122222 223322222 24
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+|+||++.|.. ......++.++.. +++|.++..
T Consensus 188 ~d~vid~~G~~------------~~~~~~~~~l~~~--G~iv~~G~~ 220 (280)
T TIGR03366 188 VDVALEFSGAT------------AAVRACLESLDVG--GTAVLAGSV 220 (280)
T ss_pred CCEEEECCCCh------------HHHHHHHHHhcCC--CEEEEeccC
Confidence 99999987632 1233345555443 488888764
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.057 Score=50.92 Aligned_cols=105 Identities=12% Similarity=0.172 Sum_probs=70.5
Q ss_pred EEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhcc--CCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 90 VVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQL--QGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 90 VtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|.|+ |.||..++..|+..+ .++++++++++...+....+...... ..+.+.. .|. +.+++ +|+|
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~----~~~~d----aDiv 68 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GDY----SDCKD----ADLV 68 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CCH----HHHCC----CCEE
Confidence 4566 999999999999887 37999999877654433322222211 1233332 222 45666 9999
Q ss_pred EEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 166 VSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 166 v~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
|-+||.... +..+.++.|..-.+.+.+.+++++.+ .+|.+|
T Consensus 69 Vitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 113 (299)
T TIGR01771 69 VITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT 113 (299)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 999997532 34457888999999999999888754 455555
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.073 Score=52.69 Aligned_cols=37 Identities=30% Similarity=0.406 Sum_probs=33.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
.|+|.|.|. |++|..++..|+++|++|+++++++++.
T Consensus 3 ~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v 39 (415)
T PRK11064 3 FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAV 39 (415)
T ss_pred ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 478999987 9999999999999999999999988754
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.061 Score=51.02 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK 119 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~ 119 (405)
.+|+|.|.|+ |.+|+.++..|.+.|++|++.+|+.
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~ 37 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRS 37 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3578999987 9999999999999999999999875
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.087 Score=51.13 Aligned_cols=98 Identities=19% Similarity=0.242 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+.+|+|.|+ |.+|..+++.+...|.+|++++.+.++.. ...... ++..+. |..+.+.+.+...+ +|
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~------~~~~~~-Ga~~vi-~~~~~~~~~~~~~~----~D 249 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKED------EAINRL-GADSFL-VSTDPEKMKAAIGT----MD 249 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhh------hHHHhC-CCcEEE-cCCCHHHHHhhcCC----CC
Confidence 4678999775 99999999998889999888877655421 111222 333222 33344445544333 89
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+||.+.|.. ......++.++.. +++|.++..
T Consensus 250 ~vid~~g~~------------~~~~~~~~~l~~~--G~iv~vG~~ 280 (360)
T PLN02586 250 YIIDTVSAV------------HALGPLLGLLKVN--GKLITLGLP 280 (360)
T ss_pred EEEECCCCH------------HHHHHHHHHhcCC--cEEEEeCCC
Confidence 999987731 1223344555443 478877643
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.049 Score=53.55 Aligned_cols=72 Identities=24% Similarity=0.308 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
+.|+|+|+|+ |.+|+.+++.+.+.|++|++++.++.... ... .-..+..|..|.+.+.+.++. .++|
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~------~~~----ad~~~~~~~~d~~~l~~~~~~--~~id 77 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPA------MQV----AHRSHVIDMLDGDALRAVIER--EKPD 77 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCch------HHh----hhheEECCCCCHHHHHHHHHH--hCCC
Confidence 4578999987 78999999999999999999998765321 011 113467788999999888884 3599
Q ss_pred EEEEc
Q 043385 164 VVVSC 168 (405)
Q Consensus 164 ~Vv~~ 168 (405)
.|+..
T Consensus 78 ~vi~~ 82 (395)
T PRK09288 78 YIVPE 82 (395)
T ss_pred EEEEe
Confidence 99864
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.034 Score=53.19 Aligned_cols=67 Identities=16% Similarity=0.282 Sum_probs=50.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
..+.+|+|.|.|. |.||+.+++.|...|++|++.+|++... . ..++ -..++.+++++
T Consensus 142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~---------~---~~~~-------~~~~l~ell~~--- 198 (330)
T PRK12480 142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKD---------L---DFLT-------YKDSVKEAIKD--- 198 (330)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHh---------h---hhhh-------ccCCHHHHHhc---
Confidence 3578899999988 9999999999999999999999876421 0 0011 11246778887
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
+|+|+.+...
T Consensus 199 -aDiVil~lP~ 208 (330)
T PRK12480 199 -ADIISLHVPA 208 (330)
T ss_pred -CCEEEEeCCC
Confidence 9999977654
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.013 Score=55.07 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=32.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
++|.|.|+ |.+|..++..|+..|++|++++++++..
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l 39 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEAL 39 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence 68999997 9999999999999999999999987654
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.025 Score=57.32 Aligned_cols=75 Identities=24% Similarity=0.516 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+.+++|+|.|+ |.+|+.+++.|...|. +|+++.|+.++.. .+. ..+++.+.. .+.+++.+++.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~-------~La~~~~g~~i~~---~~~~dl~~al~~--- 329 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVA-------ALREEFPDVEIIY---KPLDEMLACAAE--- 329 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHH-------HHHHHhCCCceEe---ecHhhHHHHHhc---
Confidence 66789999999 9999999999999996 7999999876542 221 112222222 223445666776
Q ss_pred CccEEEEccccc
Q 043385 161 SIDVVVSCLASR 172 (405)
Q Consensus 161 ~~d~Vv~~a~~~ 172 (405)
+|+||.+.+..
T Consensus 330 -aDVVIsAT~s~ 340 (519)
T PLN00203 330 -ADVVFTSTSSE 340 (519)
T ss_pred -CCEEEEccCCC
Confidence 99999876543
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.079 Score=51.30 Aligned_cols=99 Identities=17% Similarity=0.294 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHH---HHHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLE---SLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~l~~~~~~~~ 159 (405)
.+.+|||.|+ |.+|...++.+...|.+ |+++++++++. +.+... +...+ .|..+.+ .+.+...+
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~-------~~~~~~-Ga~~~-i~~~~~~~~~~i~~~~~~-- 243 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKL-------EWAREF-GATHT-VNSSGTDPVEAIRALTGG-- 243 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-------HHHHHc-CCceE-EcCCCcCHHHHHHHHhCC--
Confidence 4679999986 99999999988888985 88888877653 222222 33221 2333332 23333322
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
.++|+||.+.|.. ......++.++.. +++|.++..
T Consensus 244 ~g~d~vid~~g~~------------~~~~~~~~~~~~~--G~iv~~G~~ 278 (358)
T TIGR03451 244 FGADVVIDAVGRP------------ETYKQAFYARDLA--GTVVLVGVP 278 (358)
T ss_pred CCCCEEEECCCCH------------HHHHHHHHHhccC--CEEEEECCC
Confidence 2599999988731 1223344555544 478888754
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.097 Score=50.97 Aligned_cols=98 Identities=17% Similarity=0.184 Sum_probs=60.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHH---HHHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLE---SLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~l~~~~~~~~ 159 (405)
.+.+|+|+|+ |.+|...++.+...|. +|+++++++++. +..... ++..+ .|..+.+ .+.+...
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~-------~~a~~~-Ga~~~-i~~~~~~~~~~i~~~~~--- 257 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKL-------ALAREL-GATAT-VNAGDPNAVEQVRELTG--- 257 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHH-------HHHHHc-CCceE-eCCCchhHHHHHHHHhC---
Confidence 4678999985 9999999998888898 698888877653 222222 33222 2333332 2222222
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+++|+||.+.|.. ......++.++.. +++|.++..
T Consensus 258 ~g~d~vid~~G~~------------~~~~~~~~~l~~~--G~iv~~G~~ 292 (371)
T cd08281 258 GGVDYAFEMAGSV------------PALETAYEITRRG--GTTVTAGLP 292 (371)
T ss_pred CCCCEEEECCCCh------------HHHHHHHHHHhcC--CEEEEEccC
Confidence 2599999988632 1233445555544 478877754
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.023 Score=47.95 Aligned_cols=70 Identities=21% Similarity=0.313 Sum_probs=45.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+.+|+++|+|= |.+|+.+++.|...|.+|++..++|-+. ......+.++.. +.+++..
T Consensus 20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~a--------lqA~~dGf~v~~--------~~~a~~~---- 78 (162)
T PF00670_consen 20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRA--------LQAAMDGFEVMT--------LEEALRD---- 78 (162)
T ss_dssp --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH--------HHHHHTT-EEE---------HHHHTTT----
T ss_pred eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHH--------HHhhhcCcEecC--------HHHHHhh----
Confidence 357899999998 9999999999999999999999987542 112224665442 5566666
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
.|++|.+.|..
T Consensus 79 adi~vtaTG~~ 89 (162)
T PF00670_consen 79 ADIFVTATGNK 89 (162)
T ss_dssp -SEEEE-SSSS
T ss_pred CCEEEECCCCc
Confidence 89999877743
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.034 Score=54.18 Aligned_cols=72 Identities=19% Similarity=0.201 Sum_probs=52.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
.++.+|+|.|.|. |.||+.+++.|..-|.+|++.+|..... ..... .+++ -..+++++++.
T Consensus 188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~-------~~~~~-~g~~-------~~~~l~ell~~--- 248 (385)
T PRK07574 188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPE-------EVEQE-LGLT-------YHVSFDSLVSV--- 248 (385)
T ss_pred eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCch-------hhHhh-cCce-------ecCCHHHHhhc---
Confidence 3578899999998 9999999999999999999999875321 11111 1222 12347778887
Q ss_pred CccEEEEccccc
Q 043385 161 SIDVVVSCLASR 172 (405)
Q Consensus 161 ~~d~Vv~~a~~~ 172 (405)
+|+|+.+....
T Consensus 249 -aDvV~l~lPlt 259 (385)
T PRK07574 249 -CDVVTIHCPLH 259 (385)
T ss_pred -CCEEEEcCCCC
Confidence 99999877643
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.044 Score=55.43 Aligned_cols=77 Identities=21% Similarity=0.254 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+++|+|.|+ |++|..+++.|.++|++|+++++.+.... ....+.+.. .+++++.++-.. ...+ +
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~--~~~~~~l~~-~gv~~~~~~~~~------~~~~----~ 79 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERH--RALAAILEA-LGATVRLGPGPT------LPED----T 79 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhh--HHHHHHHHH-cCCEEEECCCcc------ccCC----C
Confidence 45789999998 99999999999999999999987653211 001122333 377777665332 1233 8
Q ss_pred cEEEEcccccC
Q 043385 163 DVVVSCLASRS 173 (405)
Q Consensus 163 d~Vv~~a~~~~ 173 (405)
|.||...|..+
T Consensus 80 D~Vv~s~Gi~~ 90 (480)
T PRK01438 80 DLVVTSPGWRP 90 (480)
T ss_pred CEEEECCCcCC
Confidence 99998888654
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.044 Score=52.05 Aligned_cols=67 Identities=16% Similarity=0.299 Sum_probs=54.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+++|.|.|| |.+|+.++.+-.+-|++|++++-+++.... .. .-..+.++.+|++.++++.+. +|+
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~------~v----a~~~i~~~~dD~~al~ela~~----~DV 65 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAA------QV----ADRVIVAAYDDPEALRELAAK----CDV 65 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchh------hc----ccceeecCCCCHHHHHHHHhh----CCE
Confidence 368999999 999999999999999999999977765421 11 225667788899999999998 898
Q ss_pred EE
Q 043385 165 VV 166 (405)
Q Consensus 165 Vv 166 (405)
|=
T Consensus 66 iT 67 (375)
T COG0026 66 IT 67 (375)
T ss_pred EE
Confidence 85
|
|
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.089 Score=49.79 Aligned_cols=99 Identities=23% Similarity=0.289 Sum_probs=61.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHH-HHHHHHHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLE-SLEKSLENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~-~l~~~~~~~~~~~d 163 (405)
+.+|+|.|++|.+|..+++.+...|.+|+++++++++. +.+... ++..+ .|..+.+ .+.+...+ +.+|
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~-------~~~~~~-g~~~~-~~~~~~~~~~~~~~~~--~~~d 215 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQA-------DYLKSL-GASEV-LDREDLLDESKKPLLK--ARWA 215 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHhc-CCcEE-EcchhHHHHHHHHhcC--CCcc
Confidence 35899999999999999998888899999999887543 222222 33222 2333221 22222222 3489
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+++.+. ......++.++.. +++|.++...
T Consensus 216 ~vi~~~~~-------------~~~~~~~~~l~~~--g~~v~~g~~~ 246 (325)
T cd05280 216 GAIDTVGG-------------DVLANLLKQTKYG--GVVASCGNAA 246 (325)
T ss_pred EEEECCch-------------HHHHHHHHhhcCC--CEEEEEecCC
Confidence 99998662 1233445555443 4788887653
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.089 Score=50.61 Aligned_cols=100 Identities=17% Similarity=0.290 Sum_probs=60.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhccCCcE-EEEcCCCCHHHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQLQGAS-VCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~-~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+.+|+|+|+ |.+|..+++.+...|.+ |+++++++++. +.+... +.. ++..+-.+.+.+.+...+ .+
T Consensus 160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~-------~~~~~~-Ga~~~i~~~~~~~~~~~~~~~~--~~ 228 (347)
T PRK10309 160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKL-------ALAKSL-GAMQTFNSREMSAPQIQSVLRE--LR 228 (347)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH-------HHHHHc-CCceEecCcccCHHHHHHHhcC--CC
Confidence 4679999975 99999999998889986 67787776543 222222 222 222111123344444443 34
Q ss_pred cc-EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 162 ID-VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 162 ~d-~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+| +||.++|.. ......+++++.. ++++.++..
T Consensus 229 ~d~~v~d~~G~~------------~~~~~~~~~l~~~--G~iv~~G~~ 262 (347)
T PRK10309 229 FDQLILETAGVP------------QTVELAIEIAGPR--AQLALVGTL 262 (347)
T ss_pred CCeEEEECCCCH------------HHHHHHHHHhhcC--CEEEEEccC
Confidence 77 899988742 1223345555544 478877654
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.024 Score=55.21 Aligned_cols=75 Identities=28% Similarity=0.465 Sum_probs=58.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
++++++|||.|| |-+|.-++++|.++| .+|+++.|+.++.. .+...-+ +++...+.+...+..
T Consensus 175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~-------~La~~~~-----~~~~~l~el~~~l~~--- 238 (414)
T COG0373 175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAE-------ELAKKLG-----AEAVALEELLEALAE--- 238 (414)
T ss_pred ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHH-------HHHHHhC-----CeeecHHHHHHhhhh---
Confidence 368899999999 999999999999999 78999999987652 2222112 455556778888887
Q ss_pred CccEEEEcccccC
Q 043385 161 SIDVVVSCLASRS 173 (405)
Q Consensus 161 ~~d~Vv~~a~~~~ 173 (405)
+|+||.+.+...
T Consensus 239 -~DvVissTsa~~ 250 (414)
T COG0373 239 -ADVVISSTSAPH 250 (414)
T ss_pred -CCEEEEecCCCc
Confidence 999999877543
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.08 Score=51.06 Aligned_cols=37 Identities=11% Similarity=0.309 Sum_probs=31.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREK 119 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~ 119 (405)
.++..+|+|.|+ |++|+.++..|++.|. ++++++.+.
T Consensus 173 kL~~~~VaIVG~-GG~GS~Va~~LAR~GVgeI~LVD~D~ 210 (393)
T PRK06153 173 KLEGQRIAIIGL-GGTGSYILDLVAKTPVREIHLFDGDD 210 (393)
T ss_pred HHhhCcEEEEcC-CccHHHHHHHHHHcCCCEEEEECCCE
Confidence 356679999999 8899999999999994 788888653
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.033 Score=52.08 Aligned_cols=39 Identities=15% Similarity=0.265 Sum_probs=35.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK 119 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~ 119 (405)
-+..+++|.|.|.+|.+|+.++..|+++|+.|+++.|..
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t 193 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS 193 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence 367899999999999999999999999999999997653
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.045 Score=54.14 Aligned_cols=36 Identities=25% Similarity=0.504 Sum_probs=32.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
|+|.|.|. |.+|..++..|++.|++|+++++++++.
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v 36 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKV 36 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHH
Confidence 47899987 9999999999999999999999987654
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.073 Score=42.87 Aligned_cols=32 Identities=34% Similarity=0.720 Sum_probs=27.1
Q ss_pred eEEEEcCCChhHHHHHHHHHhC-CCeEEEE-ecC
Q 043385 87 NILVVGSTGYIGKFVVEELVSR-GFNVIAI-ARE 118 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~l-~r~ 118 (405)
+|.|+|++|.+|..+++.|.+. ++++.++ +|+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~ 34 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASA 34 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEech
Confidence 5789999999999999999995 7888877 444
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.068 Score=51.64 Aligned_cols=102 Identities=20% Similarity=0.250 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+.+|+|+|+ |.+|...++.+...|.+|++++|+..... +.+..... ++..+ |..+.+ +.+ .+. .+.+|
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~----~~~~~~~~-Ga~~v--~~~~~~-~~~-~~~-~~~~d 240 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDP----KADIVEEL-GATYV--NSSKTP-VAE-VKL-VGEFD 240 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHH----HHHHHHHc-CCEEe--cCCccc-hhh-hhh-cCCCC
Confidence 5679999986 99999999888888999999998531110 11222222 44443 433322 211 111 13599
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+||.+.|.. ......++.++.. +++|.++....
T Consensus 241 ~vid~~g~~------------~~~~~~~~~l~~~--G~~v~~G~~~~ 273 (355)
T cd08230 241 LIIEATGVP------------PLAFEALPALAPN--GVVILFGVPGG 273 (355)
T ss_pred EEEECcCCH------------HHHHHHHHHccCC--cEEEEEecCCC
Confidence 999998732 1122344444444 37887776543
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.042 Score=53.92 Aligned_cols=68 Identities=21% Similarity=0.239 Sum_probs=49.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
...+++|+|.|+ |.||..+++.+...|.+|+++++++.+.. .... .++..+ + +.+++++
T Consensus 199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~-------~A~~-~G~~~~-----~---~~e~v~~---- 257 (413)
T cd00401 199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICAL-------QAAM-EGYEVM-----T---MEEAVKE---- 257 (413)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHH-------HHHh-cCCEEc-----c---HHHHHcC----
Confidence 356889999999 99999999999999999999998876531 1121 244332 1 2345566
Q ss_pred ccEEEEccc
Q 043385 162 IDVVVSCLA 170 (405)
Q Consensus 162 ~d~Vv~~a~ 170 (405)
+|+||.+.|
T Consensus 258 aDVVI~atG 266 (413)
T cd00401 258 GDIFVTTTG 266 (413)
T ss_pred CCEEEECCC
Confidence 899999876
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.0037 Score=53.05 Aligned_cols=78 Identities=23% Similarity=0.406 Sum_probs=46.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEE
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVV 166 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv 166 (405)
||.|.|| |..|.+++..|..+|++|++.+|+++...............++++.-. .+.=..++++++++ .|+||
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~----ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALED----ADIII 74 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-----SEEE
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCc----ccEEE
Confidence 6889999 999999999999999999999998743321100000000112221111 11111336678887 99999
Q ss_pred Eccc
Q 043385 167 SCLA 170 (405)
Q Consensus 167 ~~a~ 170 (405)
.+..
T Consensus 75 iavP 78 (157)
T PF01210_consen 75 IAVP 78 (157)
T ss_dssp E-S-
T ss_pred eccc
Confidence 7543
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.16 Score=50.83 Aligned_cols=92 Identities=15% Similarity=0.271 Sum_probs=60.0
Q ss_pred CCCCeEEEEcCC---ChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHh
Q 043385 83 PKDINILVVGST---GYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 83 ~~~~~vlVtGat---G~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
+..++|.|.|++ |.+|..+++.|.+.|+ +|+.+..+.... .++.++ .++.++-.
T Consensus 5 ~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i-------------~G~~~~-------~sl~~lp~- 63 (447)
T TIGR02717 5 FNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEI-------------LGVKAY-------PSVLEIPD- 63 (447)
T ss_pred cCCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCcc-------------CCcccc-------CCHHHCCC-
Confidence 345789999998 6789999999999997 576665433211 122211 11222212
Q ss_pred hCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 158 LGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 158 ~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
.+|.++-+.. ...+..+++.|.+.|++.+|.+|+-...
T Consensus 64 ---~~Dlavi~vp-------------~~~~~~~l~e~~~~gv~~~vi~s~gf~e 101 (447)
T TIGR02717 64 ---PVDLAVIVVP-------------AKYVPQVVEECGEKGVKGAVVITAGFKE 101 (447)
T ss_pred ---CCCEEEEecC-------------HHHHHHHHHHHHhcCCCEEEEECCCccc
Confidence 3888886543 3446678888888999988888765443
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.024 Score=53.86 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=32.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
++|.|.|+ |-+|+.++..|+..|++|++.+++++..
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~ 43 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAE 43 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 68999998 9999999999999999999999987643
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.13 Score=49.69 Aligned_cols=101 Identities=18% Similarity=0.356 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH--HHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL--ESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~~l~~~~~~~~-- 159 (405)
.+.+|+|.|+ |.+|...++.+...|.+|+++++++++. +..... ++..+ .|..+. +.+.+.++...
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~-------~~~~~~-Ga~~~-i~~~~~~~~~~~~~~~~~t~~ 235 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKL-------EMMKGF-GADLT-LNPKDKSAREVKKLIKAFAKA 235 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHH-------HHHHHh-CCceE-ecCccccHHHHHHHHHhhccc
Confidence 4679999999 9999999999999999999998877653 222222 33222 233322 33444333211
Q ss_pred CCcc----EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 160 TSID----VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 160 ~~~d----~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
.++| +||.+.|.. ......++.++.. ++++.++..
T Consensus 236 ~g~d~~~d~v~d~~g~~------------~~~~~~~~~l~~~--G~iv~~G~~ 274 (349)
T TIGR03201 236 RGLRSTGWKIFECSGSK------------PGQESALSLLSHG--GTLVVVGYT 274 (349)
T ss_pred CCCCCCcCEEEECCCCh------------HHHHHHHHHHhcC--CeEEEECcC
Confidence 1354 888887632 1233345555544 478888754
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.013 Score=54.50 Aligned_cols=40 Identities=18% Similarity=0.313 Sum_probs=35.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIR 123 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~ 123 (405)
.++++|+|.|| |+.+++++..|++.| .+|+++.|+.++..
T Consensus 124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~ 164 (283)
T COG0169 124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAE 164 (283)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 34689999999 999999999999999 58999999987753
|
|
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.6 Score=43.44 Aligned_cols=122 Identities=20% Similarity=0.248 Sum_probs=69.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH---HHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL---ESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~l~~~~~~~~~~ 161 (405)
.++|+|.| .|.+|+.+++.|.++|+.|.++.++..... .. .....++.|. +.......+
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~--------~~-----~a~~lgv~d~~~~~~~~~~~~~---- 64 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAAT--------LK-----AALELGVIDELTVAGLAEAAAE---- 64 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHH--------HH-----HHhhcCcccccccchhhhhccc----
Confidence 36677766 699999999999999999988888765421 11 1112344333 112344444
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHh-cCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhhhcCCceE
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRN-CGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTY 240 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~-~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~~~gi~~ 240 (405)
.|+||-+.. +..+..+++.... ...+.+| ..-+..|...-+.++.+.. .+.++
T Consensus 65 aD~VivavP-------------i~~~~~~l~~l~~~l~~g~iv-----------~Dv~S~K~~v~~a~~~~~~--~~~~~ 118 (279)
T COG0287 65 ADLVIVAVP-------------IEATEEVLKELAPHLKKGAIV-----------TDVGSVKSSVVEAMEKYLP--GDVRF 118 (279)
T ss_pred CCEEEEecc-------------HHHHHHHHHHhcccCCCCCEE-----------EecccccHHHHHHHHHhcc--CCCee
Confidence 899997644 3345556655542 2333444 1223455555444544332 12256
Q ss_pred EEEecCCcccCc
Q 043385 241 SIVRPTAFFKSL 252 (405)
Q Consensus 241 ~ilRp~~v~g~~ 252 (405)
+-..| ++||-
T Consensus 119 vg~HP--M~G~~ 128 (279)
T COG0287 119 VGGHP--MFGPE 128 (279)
T ss_pred EecCC--CCCCc
Confidence 65555 66764
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.12 Score=50.39 Aligned_cols=98 Identities=19% Similarity=0.266 Sum_probs=61.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+.+|+|.|+ |.+|...++.+...|.+|++++++.++.. +..... ++..+ .|..+.+.+.+... .+|
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~------~~a~~l-Ga~~~-i~~~~~~~v~~~~~----~~D 244 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKER------EAIDRL-GADSF-LVTTDSQKMKEAVG----TMD 244 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhH------HHHHhC-CCcEE-EcCcCHHHHHHhhC----CCc
Confidence 4678999886 99999999998889999998887654311 112222 33322 23344444555443 389
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+||.+.|.. ......++.++.. +++|.++..
T Consensus 245 ~vid~~G~~------------~~~~~~~~~l~~~--G~iv~vG~~ 275 (375)
T PLN02178 245 FIIDTVSAE------------HALLPLFSLLKVS--GKLVALGLP 275 (375)
T ss_pred EEEECCCcH------------HHHHHHHHhhcCC--CEEEEEccC
Confidence 999987732 1233445555443 488888753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 3e-41
Identities = 61/323 (18%), Positives = 113/323 (34%), Gaps = 39/323 (12%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ--GASVCFSD 144
IL++G+TGYIG+ V + + G + RE + +K + L + GA++
Sbjct: 6 RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNS-EKAQLLESFKASGANIVHGS 64
Query: 145 VTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204
+ + SL ++++N +DVV+S + S +S +A + R +
Sbjct: 65 IDDHASLVEAVKN----VDVVISTVGSLQI---ESQVNIIKAIKEVGTVKRFFPSEFGND 117
Query: 205 LSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFF----KSLGGQVELVK 260
+ + +P K K + E G Y+ V F +SL
Sbjct: 118 VDNVHAVEPAKSVFEVKAKVRRAI-----EAEGIPYTYVSSNCFAGYFLRSLAQAGLTAP 172
Query: 261 EGKPYVMFGDG-------------KLCAYCVLSEDKINQILPIGGPGKALTPLEQGEILF 307
V+ GDG V +N+ L + P L+ E +
Sbjct: 173 PRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWE 232
Query: 308 RLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETG 367
+ + K + VP + I F I ++ + F K + + P
Sbjct: 233 KKIDKTLEKAYVPEEEVLKLIADTPFPANISIAI-SHSIFVKGDQTNFE-----IGPAGV 286
Query: 368 EYSAEKTPSYGKDTLEEFFERVL 390
E S + P T++E+ +
Sbjct: 287 EAS-QLYPDVKYTTVDEYLSNFV 308
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 5e-37
Identities = 61/337 (18%), Positives = 111/337 (32%), Gaps = 62/337 (18%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+L+VG TGYIGK +V +S G + R + + + GA + + +
Sbjct: 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD 65
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
+ + L +L+ +DVV+S LA + A + G L S
Sbjct: 66 DHQRLVDALKQ----VDVVISALAGGVL------SHHILEQLKLVEAIKEAGNIKRFLPS 115
Query: 207 AICVQ--------KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVE- 257
+ +P K K + E + Y+ V F G +
Sbjct: 116 EFGMDPDIMEHALQPGSITFIDKRKVRRAI-----EAASIPYTYVSSNMFAGYFAGSLAQ 170
Query: 258 ----LVKEGKPYVMFGDG-------------KLCAYCVLSEDKINQILPIGGPGKALTPL 300
++ +++GDG + +N+ + I P L+
Sbjct: 171 LDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQK 230
Query: 301 EQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESML 360
E +I RL + + + DFL + +D + KI R + +
Sbjct: 231 EVIQIWERLSEQNLDKIYIS---------SQDFLADM----KDKSYEEKIVRCHLY-QIF 276
Query: 361 I----LDPETGEYSAEKT---PSYGKDTLEEFFERVL 390
+ E G + E T P T++ + ER +
Sbjct: 277 FRGDLYNFEIGPNAIEATKLYPEVKYVTMDSYLERYV 313
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 3e-34
Identities = 42/241 (17%), Positives = 89/241 (36%), Gaps = 30/241 (12%)
Query: 65 ITASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG 124
+ +S +S N + + +LVVG+ G + ++++ EL ++G +A+ R
Sbjct: 1 MGSSHHHHHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVR------- 53
Query: 125 RNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCL-ASRSGGVKDSWKID 183
++ L + + + +++ E + + ID VV + G + ID
Sbjct: 54 NEEQGPELRERGASDIVVANLE--EDFSHAFAS----IDAVVFAAGSGPHTGADKTILID 107
Query: 184 YEANRNSLVAGRNCGASHFVLLSAICVQKP------LLEFQRAKLKFEAEMMKVAEEDSG 237
++ G F+++S++ P + + AK + E+ + S
Sbjct: 108 LWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDEL-----KRSS 162
Query: 238 FTYSIVRPTAFFKSLG-GQVELVKEGKPYVMF---GD-GKLCAYCVLSEDKINQILPIGG 292
Y+IVRP G+V + D K+ A V + I + +
Sbjct: 163 LDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLN 222
Query: 293 P 293
Sbjct: 223 G 223
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 2e-31
Identities = 46/266 (17%), Positives = 91/266 (34%), Gaps = 59/266 (22%)
Query: 87 NILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSD 144
+LV G++G G+ V ++L F + R +E + A V D
Sbjct: 6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ-------GKEKI--GGEADVFIGD 56
Query: 145 VTNLESLEKSLENLGTSIDVVVSCLASRSG------------------GVKDSWKIDYEA 186
+T+ +S+ + + ID +V ++ + ++D+
Sbjct: 57 ITDADSINPAFQG----IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIG 112
Query: 187 NRNSLVAGRNCGASHFVLLSAICVQKP--------LLEFQRAKLKFEAEMMKVAEEDSGF 238
+N + A + G H V++ ++ P K K E + DSG
Sbjct: 113 QKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYL-----ADSGT 167
Query: 239 TYSIVRPTAFFKSLGGQVELV-KEGKPYVMFGDG--------KLCAYCVLSEDKINQILP 289
Y+I+R GG EL+ + + ++C +L E+ N+
Sbjct: 168 PYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFD 227
Query: 290 IGGPGKALTPLEQGEI--LF-RLLGK 312
+G T + LF ++ +
Sbjct: 228 LGSK-PEGTSTPTKDFKALFSQVTSR 252
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-30
Identities = 46/217 (21%), Positives = 84/217 (38%), Gaps = 34/217 (15%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
I +VGSTG +GK +++ L + + + A AR K E + Q DV
Sbjct: 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR----------KVEQVPQYNNVKAVHFDVD 51
Query: 147 -NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205
E + K L +D +++ S K K+D + A F+LL
Sbjct: 52 WTPEEMAKQLHG----MDAIINVSGSGG---KSLLKVDLYGAVKLMQAAEKAEVKRFILL 104
Query: 206 SAICVQKP----------LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-G 254
S I +P L ++ AK + + K ++ Y+I++P A + G
Sbjct: 105 STIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTK----ETNLDYTIIQPGALTEEEATG 160
Query: 255 QVELVKEGKPYVMFGD-GKLCAYCVLSEDKINQILPI 290
+++ E GD V+++ I +++ +
Sbjct: 161 LIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISM 197
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 4e-30
Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 23/215 (10%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
I + G+TG G + + V G+ V + R+ S + + A V DV
Sbjct: 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR--------PAHVVVGDVL 56
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
++K++ D V+ L +R+ + E RN + A + G V +
Sbjct: 57 QAADVDKTVAG----QDAVIVLLGTRND--LSPTTVMSEGARNIVAAMKAHGVDKVVACT 110
Query: 207 AICVQKPLLEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFF-KSLGGQVELVKEG 262
+ + + +L+ + + +SG Y V P + L G + +G
Sbjct: 111 SAFLLWDPTKV-PPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDG 169
Query: 263 KPYVMF---GD-GKLCAYCVLSEDKINQILPIGGP 293
+ D G C+ +++
Sbjct: 170 RGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 1e-27
Identities = 55/323 (17%), Positives = 105/323 (32%), Gaps = 38/323 (11%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+L+ G+TG+IG+FV + +AR + + L +GA + + +
Sbjct: 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED-KGAIIVYGLIN 70
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
E++EK L+ ID+VVS + S + + A + G L S
Sbjct: 71 EQEAMEKILK--EHEIDIVVSTVGGESILDQ----------IALVKAMKAVGTIKRFLPS 118
Query: 207 AICVQKPLLEFQRAKLKFEAEMMKVAE--EDSGFTYSIVRPTAF----FKSLGGQVELVK 260
+ L E +V + E+SG ++ + + + + E++
Sbjct: 119 EFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLP 178
Query: 261 EGKPYVMFGDG-------------KLCAYCVLSEDKINQILPIGGPGKALTPLEQGEILF 307
+ ++GDG K V +N+ + L E +
Sbjct: 179 PTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWE 238
Query: 308 RLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETG 367
+ +G+ + V + A G + + F K G +D
Sbjct: 239 KKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDI-FIK-GCQVNFS----IDGPED 292
Query: 368 EYSAEKTPSYGKDTLEEFFERVL 390
P T+EE F +
Sbjct: 293 VEVTTLYPEDSFRTVEECFGEYI 315
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 3e-27
Identities = 55/334 (16%), Positives = 110/334 (32%), Gaps = 60/334 (17%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ--GASVCFSD 144
IL++G TG IG+ +V + G A+ R+ KEE ++ Q G + D
Sbjct: 4 KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63
Query: 145 VTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204
+ + E+L K+++ +D+V+ + E + A + G
Sbjct: 64 INDHETLVKAIKQ----VDIVICAAGR----------LLIEDQVKIIKAIKEAGNVKKFF 109
Query: 205 LS-------AICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFF----KSLG 253
S +P+ + K E G Y+ + AF ++L
Sbjct: 110 PSEFGLDVDRHDAVEPVRQVFEEKASIRR-----VIEAEGVPYTYLCCHAFTGYFLRNLA 164
Query: 254 GQVELVKEGKPYVMFGDG-------------KLCAYCVLSEDKINQILPIGGPGKALTPL 300
V+ GDG + +N+ + I P LT
Sbjct: 165 QLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQN 224
Query: 301 EQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAA---- 356
E + + +GK + V + ++K + + Y++
Sbjct: 225 EVIALWEKKIGKTLEKTYVS----------EEQVLKDIQESSFPHNYL-LALYHSQQIKG 273
Query: 357 ESMLILDPETGEYSAEKTPSYGKDTLEEFFERVL 390
+++ +DP ++E P T +E+ + +
Sbjct: 274 DAVYEIDPAKDIEASEAYPDVTYTTADEYLNQFV 307
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-25
Identities = 39/222 (17%), Positives = 83/222 (37%), Gaps = 35/222 (15%)
Query: 87 NILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
N+L++G+ G I + V+ +L + AR+ + I + + DV
Sbjct: 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP--------TNSQIIMGDV 76
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205
N +L+++++ D+V + L +D +A + + A + C + +
Sbjct: 77 LNHAALKQAMQG----QDIVYANLTGE--------DLDIQA-NSVIAAMKACDVKRLIFV 123
Query: 206 SAICV----QKPLLEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFFKSLGGQVEL 258
++ + +E+ A + + + A + SG Y+I+RP EL
Sbjct: 124 LSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYEL 183
Query: 259 VKEGKPYVM----FGD-GKLCAYCVLSEDK-INQILPIGGPG 294
+P+ L + +K I + + I PG
Sbjct: 184 TSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG 225
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 6e-22
Identities = 53/281 (18%), Positives = 95/281 (33%), Gaps = 43/281 (15%)
Query: 87 NILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSD 144
+I V G+TG +G V++ L+ + +IAI R +K TL QG V D
Sbjct: 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-------NVEKASTLAD-QGVEVRHGD 53
Query: 145 VTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204
ESL+K+ + ++ + N + A R+ G H
Sbjct: 54 YNQPESLQKAFAG----VSKLLFISGPHYDNTL-----LIVQHANVVKAARDAGVKHIAY 104
Query: 205 LSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQV--ELVKEG 262
++ ++ L E + + Y+ +R + + + G
Sbjct: 105 TGYAFAEESIIPLAHVHLATEYAI-----RTTNIPYTFLRNALYTDFFVNEGLRASTESG 159
Query: 263 KPYVMFGDGKL----------CAYCVLSEDK-INQILPIGGPGKALTPLEQGEILFRLLG 311
G G + A VL+E+ N+ + + T E +IL + G
Sbjct: 160 AIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSN-QPWTFDELAQILSEVSG 218
Query: 312 KEPKFLKVP----IGIMDFAIGVLDFLVKIFPSLEDAAEFG 348
K+ V + GV + +I ++ DA G
Sbjct: 219 KKVVHQPVSFEEEKNFLV-NAGVPEPFTEITAAIYDAISKG 258
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 91.5 bits (227), Expect = 7e-21
Identities = 55/325 (16%), Positives = 101/325 (31%), Gaps = 45/325 (13%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ--GASVCFSD 144
IL+ G TGYIG +V+ + G R S K L++ Q GA + +
Sbjct: 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS------SKTTLLDEFQSLGAIIVKGE 66
Query: 145 VTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204
+ E L + ++ +DVV+S LA + L A + G L
Sbjct: 67 LDEHEKLVELMKK----VDVVISALAFPQILDQ----------FKILEAIKVAGNIKRFL 112
Query: 205 LSAICVQKPLLEFQRAKLKFEAEMMKVAE--EDSGFTYSIVRPTAFFK-SLGGQVELVKE 261
S V++ + + E++ Y+ V F + +
Sbjct: 113 PSDFGVEEDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPYDP 172
Query: 262 GKPYVMFGDG-------------KLCAYCVLSEDKINQILPIGGPGKALTPLEQGEILFR 308
++G G +N+++ +T LE +
Sbjct: 173 KDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEK 232
Query: 309 LLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGE 368
+GK+ K + VP + L I ++ F G + + E
Sbjct: 233 KIGKKFKKIHVPEEEIVALTKELPEPENIPIAILHCL-FID-GATMSYD----FKENDVE 286
Query: 369 YSAEKTPSYGKDTLEEFFERVLREG 393
S P T++E + + +
Sbjct: 287 AS-TLYPELKFTTIDELLDIFVHDP 310
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 90.0 bits (223), Expect = 2e-20
Identities = 50/338 (14%), Positives = 95/338 (28%), Gaps = 47/338 (13%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ--GASVCFSD 144
I++ G TGYIGKF+V +S AR + + + + G ++ +
Sbjct: 6 KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTP-DSTPSSVQLREEFRSMGVTIIEGE 64
Query: 145 VTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204
+ E + L+ +D+V+S L + I + + S F
Sbjct: 65 MEEHEKMVSVLKQ----VDIVISALPFP--MISSQIHIINAIKAAGNI--KRFLPSDFGC 116
Query: 205 -LSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFF----KSLGGQVELV 259
I P K A E + Y+ V F L
Sbjct: 117 EEDRIKPLPPFESVLEKKRIIRR-----AIEAAALPYTYVSANCFGAYFVNYLLHPSPHP 171
Query: 260 KEGKPYVMFGDG-------------KLCAYCVLSEDKINQILPIGGPGKALTPLEQGEIL 306
V++G G K N+I+ P ++ E +
Sbjct: 172 NRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLW 231
Query: 307 FRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRY--YAAESMLILDP 364
G K + +P + LV++ L + + ++ +
Sbjct: 232 EAKSGLSFKKVHMP----------DEQLVRLSQELPQPQNIPVSILHSIFVKGDLMSYEM 281
Query: 365 ETGEYSA-EKTPSYGKDTLEEFFERVLREGMAGQELGE 401
+ A P +++ + + L E
Sbjct: 282 RKDDIEASNLYPELEFTSIDGLLDLFISGRAPPPTLAE 319
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-18
Identities = 52/279 (18%), Positives = 104/279 (37%), Gaps = 44/279 (15%)
Query: 88 ILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
I + G+TG +G +V+E L+ ++AI R + + QG +V +D
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA--------QGITVRQADY 53
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205
+ +L +L+ ++ ++ L S S + + +RN + A + G
Sbjct: 54 GDEAALTSALQG----VEKLL--LISSSEVGQRA-----PQHRNVINAAKAAGVKFIAYT 102
Query: 206 SAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPY 265
S + L ++ E DSG Y+++R + ++ E +
Sbjct: 103 SLLHADTSPLGLADEHIETEK-----MLADSGIVYTLLRNGWYSENYLASAPAALEHGVF 157
Query: 266 VM-FGDGKL----------CAYCVLSEDK-INQILPIGGPGKALTPLEQGEILFRLLGKE 313
+ GDGK+ A V+SE ++ + G A T + L + GK+
Sbjct: 158 IGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGD-SAWTLTQLAAELTKQSGKQ 216
Query: 314 PKFLKVP----IGIMDFAIGVLDFLVKIFPSLEDAAEFG 348
+ + + ++G+ D L + + A G
Sbjct: 217 VTYQNLSEADFAAALK-SVGLPDGLADMLADSDVGASKG 254
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 81.7 bits (202), Expect = 4e-18
Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 28/176 (15%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
I+++G++G++G ++ E ++RGF V A+ R I+ N+ V +DV+
Sbjct: 6 KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENE---------HLKVKKADVS 56
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
+L+ + + + D V+S D + + + + G + F+++
Sbjct: 57 SLDEVCEVCKG----ADAVISAFNPGWNN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVG 111
Query: 207 AICV-----QKPLLEF--------QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFF 249
L++ K E + + +E + P A
Sbjct: 112 GAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKE-KEIDWVFFSPAADM 166
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 6e-18
Identities = 46/272 (16%), Positives = 85/272 (31%), Gaps = 46/272 (16%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
NI++ G+TG++G + + ++ + R + +D SV D
Sbjct: 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVE--KVPDDWR------GKVSVRQLDY 53
Query: 146 TNLESLEKSLENLGTSIDVV--VSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203
N ES+ ++ + +D V + + S N + A + G +H +
Sbjct: 54 FNQESMVEAFKG----MDTVVFIPSIIHPSFKR-------IPEVENLVYAAKQSGVAHII 102
Query: 204 LLSAICVQK-PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQV-ELVKE 261
+ Q SG Y+ VR + L + EL+
Sbjct: 103 FIGYYADQHNNPFHMSPYFGYASR-----LLSTSGIDYTYVRMAMYMDPLKPYLPELMNM 157
Query: 262 GKPYVMFGDGKLC-----------AYCVLSEDKINQILPIGGPGKALTPLEQGEILFRLL 310
K GDG++ + + D + + G + E IL
Sbjct: 158 HKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGY--SYDMKELAAILSEAS 215
Query: 311 GKEPKFLKVP----IGIMDFAIGVLDFLVKIF 338
G E K+ V + D G L ++
Sbjct: 216 GTEIKYEPVSLETFAEMYDEPKGFGALLASMY 247
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 80.1 bits (197), Expect = 1e-17
Identities = 34/199 (17%), Positives = 64/199 (32%), Gaps = 32/199 (16%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
I V+G+TG G +V E RG V+A+ R + GA+V
Sbjct: 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVR----------DPQKAADRLGATVATLVKE 51
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
L E L+ S+D VV L+ G + + + + RN +L
Sbjct: 52 PLVLTEADLD----SVDAVVDALSVPWGS--GRGYLHLDFATHLVSLLRNSDTLAVFILG 105
Query: 207 AICVQ--------------KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL 252
+ + + ++ + + ++ + + P+ F
Sbjct: 106 SASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFP-- 163
Query: 253 GGQVELVKEGKPYVMFGDG 271
G GK ++ G+
Sbjct: 164 SGPATSYVAGKDTLLVGED 182
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 5e-16
Identities = 60/325 (18%), Positives = 100/325 (30%), Gaps = 64/325 (19%)
Query: 88 ILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
++V G TG G V L+ G F V + R + + QGA V D
Sbjct: 8 VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL------QGAEVVQGDQD 61
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
+ +E +L ++ + + + R G + V
Sbjct: 62 DQVIMELALNG----AYATFIVTNYWESCSQEQ---EVKQGKLLADLARRLGLHYVVYSG 114
Query: 207 AICVQKPLLEFQRAKL---KFEAEMMKVAEEDSGFTYSIVRPTAFFKSL--GGQVELVKE 261
++K A K E E D G + VR +F++L + +
Sbjct: 115 LENIKKLTAGRLAAAHFDGKGEVEEYF---RDIGVPMTSVRLPCYFENLLSHFLPQKAPD 171
Query: 262 GKPYVMF---GDGKL-------CAYCVLS-----EDKINQILPIGGPGKALTPLEQGEIL 306
GK Y++ GD + VLS E + Q + + T E +L
Sbjct: 172 GKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTC--RHTAEEYAALL 229
Query: 307 FRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAA---EFGKIGRYYAAESMLILD 363
+ K K+ D+ FP D A F + E L L+
Sbjct: 230 TKHTRKVVHDAKMTPE---------DYEKLGFPGARDLANMFRFYALRPDRDIELTLRLN 280
Query: 364 PETGEYSAEKTPSYGKDTLEEFFER 388
P+ TL+++ E+
Sbjct: 281 PKAL-------------TLDQWLEQ 292
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 74.3 bits (182), Expect = 2e-15
Identities = 26/226 (11%), Positives = 61/226 (26%), Gaps = 38/226 (16%)
Query: 87 NILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
I ++G+ G I + + L++ ++ R + + + + +V
Sbjct: 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGR-----QLKTRIPPEIIDHERVTVIEGSF 61
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205
N LE+++ N +VV + + A + +
Sbjct: 62 QNPGXLEQAVTN----AEVVFVGAME-----------SGSDMASIVKALSRXNIRRVIGV 106
Query: 206 SAICVQKPL-----LEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFFKSLGGQVE 257
S + + + A +S Y+I+R T +
Sbjct: 107 SMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDY 166
Query: 258 LVKEGKPYVMFGD------GKLCAYCVLSEDK---INQILPIGGPG 294
+ K + + D+ + +G PG
Sbjct: 167 ELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG 212
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 3e-15
Identities = 38/187 (20%), Positives = 74/187 (39%), Gaps = 26/187 (13%)
Query: 65 ITASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGI 122
+ + A+ FR +N + ++G++G G+ +++E++ +G V I R K
Sbjct: 1 MAETEALSKLREDFRMQNKS---VFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF 57
Query: 123 RGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDS--W 180
+ + +NQ D L+ + + DV CL + G
Sbjct: 58 --DEEAYKNVNQEVV------DFEKLDDYASAFQG----HDVGFCCLGTTRGKAGAEGFV 105
Query: 181 KIDYEANRNSLVAGRNCGASHFVLLSAICV-QKPLLEFQRAKLKFEAEMMKVAEEDSGF- 238
++D + S + G HF LLS+ + + + K + EA++ + F
Sbjct: 106 RVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEE-----LKFD 160
Query: 239 TYSIVRP 245
YS+ RP
Sbjct: 161 RYSVFRP 167
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 72.3 bits (177), Expect = 8e-15
Identities = 27/231 (11%), Positives = 69/231 (29%), Gaps = 43/231 (18%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
I ++G+TG G ++EE +RG V AI R I + ++ D+
Sbjct: 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHK---------DINILQKDIF 52
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
+L + S +VVV + + + + + +++
Sbjct: 53 DLTLSDLS------DQNVVVDAYGISPDEAEK----HVTSLDHLISVLNGTVSPRLLVVG 102
Query: 207 AICVQK--------------PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRP------- 245
+ + ++ + + F+++ + P
Sbjct: 103 GAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPG 162
Query: 246 --TAFFKSLGGQVELVKEGKPYVMFGD-GKLCAYCVLSEDKINQILPIGGP 293
T ++ + +G ++ D + + +N+ + G
Sbjct: 163 ERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGK 213
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 3e-14
Identities = 37/291 (12%), Positives = 82/291 (28%), Gaps = 58/291 (19%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
V+G+TG +G + + G +++ I R S I+ L L +++ +
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-------LAYL-EPECRVAEMLD 67
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEAN----RNSLVAGRNCGASHFV 203
LE++L +D V+ A W+ + + A +
Sbjct: 68 HAGLERALRG----LDGVIFS-AGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRIL 122
Query: 204 LLSAICV------QKPLLEFQR-----------AKLKFEAEMMKVAEEDSGFTYSIVRPT 246
+ + P E K+ + + +G I P
Sbjct: 123 YVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPG 182
Query: 247 AFF------KSLGGQVELVKEGKPYVMFGDGKLC----------AYCVLSEDKINQ--IL 288
+ G + + G+ + G+ L +I + +L
Sbjct: 183 MVLGELDIGPTTGRVITAIGNGE-MTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLL 241
Query: 289 PIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFP 339
G L + + LLG+ + + + + ++
Sbjct: 242 ----TGHNLEMADLTRRIAELLGQPAP-QPMSMAMARALATLGRLRYRVSG 287
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 1e-13
Identities = 37/172 (21%), Positives = 65/172 (37%), Gaps = 30/172 (17%)
Query: 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQLQG 137
+ PK +L+ G+TG G+ +++ ++S VIA AR +L
Sbjct: 2 HSTPK--RVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR---------KALAEHPRLDN 50
Query: 138 ASVCFSDVTNLESLEKSLENLGTSIDVVVSCL---ASRSGGVKDSWKIDYEANRNSLVAG 194
V L L L+ SID CL +G + +D++
Sbjct: 51 ------PVGPLAELLPQLDG---SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRA 101
Query: 195 RNCGASHFVLLSAICVQ-KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRP 245
GA H++++SA+ K + + R K + E + + +I RP
Sbjct: 102 LEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQ----LTIARP 149
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.1 bits (155), Expect = 3e-11
Identities = 66/405 (16%), Positives = 117/405 (28%), Gaps = 107/405 (26%)
Query: 5 FSFNMFSIQSPKSQILSRTRLSSQFINQTQVKSAPYTLSDYHVNSSQPF-KLSTSSKRFN 63
+ F M I++ + Q TR+ + ++ + + + Y+V+ QP+ KL +
Sbjct: 91 YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF--AKYNVSRLQPYLKLRQALLELR 148
Query: 64 PITASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSR--------GFNV--I 113
P N+L+ G G GK V V F + +
Sbjct: 149 P--------------------AKNVLIDGVLG-SGKTWVALDVCLSYKVQCKMDFKIFWL 187
Query: 114 AIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCL---- 169
+ N E L LQ + + N S N+ I + + L
Sbjct: 188 NLKN-------CNSPETVLEMLQ--KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 170 ASRSG--------GVKDSWKIDYEANR-NSLVAGRNCGASHFVLLSAICVQKPLLEFQRA 220
S+ V+++ + L+ R + F LSA L+
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF--LSAATTTHISLDHHSM 296
Query: 221 KLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQV----ELVKEGKPYV--MFG----D 270
L E+ + K L + V P + D
Sbjct: 297 TLT-PDEVKSL----------------LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD 339
Query: 271 GKLCA--YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAI 328
G + ++ DK+ I I L P E + +F L P +P
Sbjct: 340 GLATWDNWKHVNCDKLTTI--IESSLNVLEPAEYRK-MFDRLSVFPPSAHIP-------T 389
Query: 329 GVLDFL---VKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYS 370
+L + V + + K S++ P+ S
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHK-------YSLVEKQPKESTIS 427
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 2e-09
Identities = 49/341 (14%), Positives = 109/341 (31%), Gaps = 83/341 (24%)
Query: 99 KFVVEEL-VSRGFNVIAIAREKSGIRGRNDK-EETLNQLQGASVCFS--DVTNLE---SL 151
KFV E L ++ F + I E+ E ++L + F+ +V+ L+ L
Sbjct: 81 KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL 140
Query: 152 EKSLENLGTSIDVVV--------SCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203
++L L + +V++ + +A + + V + ++
Sbjct: 141 RQALLELRPAKNVLIDGVLGSGKTWVAL-------------DVCLSYKVQCKMDFKIFWL 187
Query: 204 LLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIV------RPTAFFKSLGGQVE 257
L + +LE KL ++ + + D + KS +
Sbjct: 188 NLKNCNSPETVLE-MLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 258 L-----VKEGKPYVMFGDGKLCAYCVLSEDK--INQI-------LPIGGPGKALTPLEQG 303
L V+ K + F + C + + K + + + + LTP E
Sbjct: 247 LLVLLNVQNAKAWNAF-NLS-CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304
Query: 304 EILFRLLGKEPKFLKVP---IGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAE--- 357
+L + L P+ L P + + ++ ++ + D + ++ +
Sbjct: 305 SLLLKYLDCRPQDL--PREVLTTNPRRLSIIAESIRDGLATWD--NW----KHVNCDKLT 356
Query: 358 -----SMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREG 393
S+ +L+P EY + + V
Sbjct: 357 TIIESSLNVLEPA--EY---------RKMFDRLS--VFPPS 384
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 4e-11
Identities = 48/332 (14%), Positives = 93/332 (28%), Gaps = 64/332 (19%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
I VVG+TG G ++ + G +V A G E L + ++ + N
Sbjct: 8 IAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG-----LIAEELQAIPNVTLFQGPLLN 62
Query: 148 -LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKID-YEANRNSLVAGRNCGA-SHFVL 204
+ ++ E + S D ++ A + G H++
Sbjct: 63 NVPLMDTLFEG----AHLAFI--------NTTSQAGDEIAIGKDLADAAKRAGTIQHYIY 110
Query: 205 LSAICVQK----PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL------GG 254
S P + K E ++ G + V + +
Sbjct: 111 SSMPDHSLYGPWPAVPMWAPKFTVE-NYVR----QLGLPSTFVYAGIYNNNFTSLPYPLF 165
Query: 255 QVELVKEGK---PYVMFGDGKL--------CAYCVLS------EDKINQILPIGGPGKAL 297
Q+EL+ +G D L +L + + + L
Sbjct: 166 QMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE--TL 223
Query: 298 TPLEQGEILFRLLGKEPKFLKVPIGIM--DFAIGVLDFLVKIFPSLEDAAEFGKIGRYYA 355
+P++ R L + +++VP + + +G + L I FG+ Y
Sbjct: 224 SPVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIE------VVFGEHKAPYF 277
Query: 356 AESMLILDPETGEYSAEKTPSYGKDTLEEFFE 387
P+ GK +
Sbjct: 278 PLPE--FSRPAAGSPKGLGPANGKGAGAGMMQ 307
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 60.1 bits (145), Expect = 4e-10
Identities = 45/288 (15%), Positives = 85/288 (29%), Gaps = 66/288 (22%)
Query: 89 LVVGSTGYIGKFVVEELVSRG-----FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS 143
L+VG TG IG + E L + V +AR R R ++ +
Sbjct: 5 LIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR-----RTR----PAWHEDNPINYVQC 55
Query: 144 DVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS--H 201
D+++ + + L L T + V + +++ + + + RN L A + H
Sbjct: 56 DISDPDDSQAKLSPL-TDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKH 114
Query: 202 FVLLSAICVQK--------------------PLLEFQRAKLKFEAEMMKVAEEDSGFTYS 241
L + P L++ E M++ E+ G T+S
Sbjct: 115 ISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWS 174
Query: 242 IVRPTAFFKSLGGQVELV------------KEGKPYVMFGDG----------------KL 273
+ RP F + + EGK G +
Sbjct: 175 VHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEH 234
Query: 274 CAYCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPI 321
+ + N+ + G ++L G E + +
Sbjct: 235 HIWAAVDPYAKNEAFNVSN-GDVFKWKHFWKVLAEQFGVECGEYEEGV 281
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 34/198 (17%), Positives = 63/198 (31%), Gaps = 41/198 (20%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
IL+ G G +G + L ++G V + R G +DVT
Sbjct: 5 KILIAG-CGDLGLELARRLTAQGHEVTGLRR-------SAQPMP-----AGVQTLIADVT 51
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
++L S+ +L +++V C+A+ + E RN+L A H +S
Sbjct: 52 RPDTLA-SIVHLRP--EILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVS 108
Query: 207 AICV------------QKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRP--------T 246
+ V P+ + K EAE + ++ +I+R
Sbjct: 109 STGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAE-----ALLAAYSSTILRFSGIYGPGRL 163
Query: 247 AFFKSLGGQVELVKEGKP 264
+ +
Sbjct: 164 RMIRQAQTPEQWPARNAW 181
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 1e-07
Identities = 26/124 (20%), Positives = 41/124 (33%), Gaps = 14/124 (11%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+ + G G IG + E L+ RG V+ I +G + E L + +
Sbjct: 23 KVFITGICGQIGSHIAELLLERGDKVVGIDNFATG------RREHLKDHPNLTFVEGSIA 76
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANR----NSLVAGRNCGASHF 202
+ + + + D VV A S D W D N N + A + F
Sbjct: 77 DHALVNQLIG--DLQPDAVVHTAA--SYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRF 132
Query: 203 VLLS 206
V
Sbjct: 133 VYFQ 136
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 3e-07
Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 22/123 (17%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+LV G+ G +G + L + V G E + D+ +
Sbjct: 5 LLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLG-----AAEAHEEIVAC------DLAD 53
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEAN----RNSLVAGRNCGASHFV 203
+++ +++ D ++ L S V+ W +AN N A RN G V
Sbjct: 54 AQAVHDLVKD----CDGIIH-LGGVS--VERPWNDILQANIIGAYNLYEAARNLGKPRIV 106
Query: 204 LLS 206
S
Sbjct: 107 FAS 109
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 5e-07
Identities = 46/289 (15%), Positives = 85/289 (29%), Gaps = 73/289 (25%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGF-------NVIAIAREKSGIRGRNDKEETLNQLQGAS 139
+I ++G+ G +G+ + + LV G I +
Sbjct: 16 HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAA---- 71
Query: 140 VCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSG-GVKD---SWKIDYEANRNSLVAGR 195
D++ EK +E DV+ A SG D ++I+ + R A R
Sbjct: 72 ----DLSAPGEAEKLVEA---RPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIR 124
Query: 196 NCGASH-----FVLLSAI--------------CVQKPLLEFQRAKLKFEAEMMKVAEEDS 236
V S+I PL + K E ++
Sbjct: 125 IANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICE-LLLSDYSRRG 183
Query: 237 GFTYSIVR--------------PTAFFKSLGGQVELVKEGKPYVMFGDGKLCAY------ 276
F +R + FF ++ + G+ V+ + +
Sbjct: 184 FFDGIGIRLPTICIRPGKPNAAASGFFSNI---LREPLVGQEAVLPVPESIRHWHASPRS 240
Query: 277 CV--------LSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFL 317
V + +K+ + PG + T EQ E L ++ G++ L
Sbjct: 241 AVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVAL 289
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 2e-06
Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
++L++GS G++ + ++ L G V R ++ +Q ++ DV
Sbjct: 5 SVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLE------SAKKLSAGVQHSTPISLDVN 57
Query: 147 NLESLEKSLENLGTSIDVVVSCL 169
+ +L+ + D+V+S +
Sbjct: 58 DDAALDAEVAK----HDLVISLI 76
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 48/272 (17%), Positives = 81/272 (29%), Gaps = 64/272 (23%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
ILV GS+G IG +V L + IA S I R+ L DV+N
Sbjct: 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIA---SDIVQRDTGGIKFITL--------DVSN 50
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSG-GVKD---SWKIDYEANRNSLVAGRNCGASHFV 203
+ +++++E ID + S G KD ++K++ N L A + V
Sbjct: 51 RDEIDRAVEKYS--IDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVV 108
Query: 204 LLSAI---------------CVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVR---- 244
+ S I + +P F K+ E + + E G +R
Sbjct: 109 IPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAE-LLGQYYYEKFGLDVRSLRYPGI 167
Query: 245 ----------PTAFFKSLGGQVELVKEGKPYVMFGDGK--------------LCAYCVLS 280
T + + + + Y + L
Sbjct: 168 ISYKAEPTAGTTDYAVEI---FYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEAD 224
Query: 281 EDKINQILPIGGPGKALTPLEQGEILFRLLGK 312
DK+ TP E + + +
Sbjct: 225 RDKLVLRNGYNVTAYTFTPSELYSKIKERIPE 256
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 3e-06
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 9/81 (11%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQG-ASVCFSDV 145
I++ G++ +G + + + G R K T+ N L D+
Sbjct: 4 IVITGASSGLGAELAKLYDAEGKATYLTGR-------SESKLSTVTNCLSNNVGYRARDL 56
Query: 146 TNLESLEKSLENLGTSIDVVV 166
+ + +E+ E L + VV
Sbjct: 57 ASHQEVEQLFEQLDSIPSTVV 77
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 3e-06
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ---GASVCF- 142
+LV G GYIG V EL+ G+ + I + RG E+L ++Q G SV F
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63
Query: 143 -SDVTNLESLEKSLENLGTSIDVVV 166
D+ + +L++ + S V+
Sbjct: 64 EMDILDQGALQRLFKK--YSFMAVI 86
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 7e-06
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 22/124 (17%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+LV G+ G +G+ + E L + + EE +Q D+
Sbjct: 5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSP--LDPAGPNEEC---VQC------DLA 53
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEAN----RNSLVAGRNCGASHF 202
+ ++ + D +V L S V+ ++ + N N A R G
Sbjct: 54 DANAVNAMVAG----CDGIVH-LGGIS--VEKPFEQILQGNIIGLYNLYEAARAHGQPRI 106
Query: 203 VLLS 206
V S
Sbjct: 107 VFAS 110
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 8e-06
Identities = 47/268 (17%), Positives = 81/268 (30%), Gaps = 62/268 (23%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
I V G TG++G++VVE + + G I + + + SD T
Sbjct: 4 KIAVTGGTGFLGQYVVESIKNDGNTPIIL-----------TRSIGNKAINDYEYRVSDYT 52
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEAN----RNSLVAGRNCGASHF 202
+ + + L + +D VV LA+ G + ++ N +N A S+
Sbjct: 53 LEDLINQ-LND----VDAVVH-LAATR-GSQGKIS-EFHDNEILTQNLYDACYENNISNI 104
Query: 203 VLLSAICV-----QKPLLEFQRAKL-------KFEAEMM-KVAEEDSGFTYSIVRPTAFF 249
V S I P E + K E + + G +R F
Sbjct: 105 VYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLR---FA 161
Query: 250 KSLG-GQ---------VELVKEGKPYVMFGDGK----------LCA--YCVLSEDKINQI 287
G + G+ + + L ++K++
Sbjct: 162 HLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGT 221
Query: 288 LPIGGPGKALTPLEQGEILFRLLGKEPK 315
IG G ALT E + G +
Sbjct: 222 FNIGS-GDALTNYEVANTINNAFGNKDN 248
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 8e-06
Identities = 29/158 (18%), Positives = 50/158 (31%), Gaps = 21/158 (13%)
Query: 60 KRFNPITASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK 119
+ + E + L+ G G+IG ++E L+ V+ +
Sbjct: 5 HHHGSMGMMSRYEELRKELPAQPKV---WLITGVAGFIGSNLLETLLKLDQKVVGLDNFA 61
Query: 120 SGIRGRNDKEETLNQLQGASVCFS----DVTNLESLEKSLENLGTSIDVVVSCLASRSGG 175
+G RN E + F D+ NL+ + +D V+ A+ G
Sbjct: 62 TG-HQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG----VDYVLH-QAAL-GS 114
Query: 176 VKDSWK---IDYEAN----RNSLVAGRNCGASHFVLLS 206
V S N N L+A R+ F +
Sbjct: 115 VPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAA 152
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 41/181 (22%), Positives = 64/181 (35%), Gaps = 36/181 (19%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+LV G G+IG +VE+L++RG V + +G R K + D+
Sbjct: 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPF--FRV------DLR 53
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWK---IDYEAN----RNSLVAGRNCGA 199
+ E +E++ V A S VK S + +D+E N N L A R G
Sbjct: 54 DKEGVERAFR--EFRPTHVSHQAAQAS--VKVSVEDPVLDFEVNLLGGLNLLEACRQYGV 109
Query: 200 SHFVLLSAIC-------VQKPLLEFQ---------RAKLKFEAEMMKVAEEDSGFTYSIV 243
V S + E +K FE + V + G + +
Sbjct: 110 EKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFE-HYLSVYGQSYGLKWVSL 168
Query: 244 R 244
R
Sbjct: 169 R 169
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 21/149 (14%)
Query: 69 TAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDK 128
+ E T L+ G G+IG ++E+L+ VI + +G + N
Sbjct: 12 SRYEEITQQLIFSPKT---WLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQ-YNLD 67
Query: 129 EETLNQLQGASVCFS----DVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWK--- 181
E F D+ +L + E+ ++ +D V+ A+ G V S
Sbjct: 68 EVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG----VDHVLH-QAAL-GSVPRSIVDPI 121
Query: 182 IDYEAN----RNSLVAGRNCGASHFVLLS 206
N N L A +N F +
Sbjct: 122 TTNATNITGFLNILHAAKNAQVQSFTYAA 150
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 23/136 (16%)
Query: 82 NPKDINILVVGSTGYIGKFVVEELVSR-GF-NVIAIAREKSGIRGRNDKEETLNQLQGAS 139
NPK IL++G+ G IG + ++L G NVIA + ++ + +
Sbjct: 2 NPK---ILIIGACGQIGTELTQKLRKLYGTENVIAS----------DIRKLNTDVVNSGP 48
Query: 140 VCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSG--GVKD---SWKIDYEANRNSLVAG 194
+ + +E +E I + +A+ K+ +W ++ + + L
Sbjct: 49 FEVVNALDFNQIEHLVEVHK--ITDIYL-MAALLSATAEKNPAFAWDLNMNSLFHVLNLA 105
Query: 195 RNCGASHFVLLSAICV 210
+ S+I V
Sbjct: 106 KAKKIKKIFWPSSIAV 121
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 8/81 (9%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQG-ASVCFSDV 145
L+ G++ IG + L G VI + + + N L+ ++ ++
Sbjct: 16 TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKL------KSLGNALKDNYTIEVCNL 69
Query: 146 TNLESLEKSLENLGTSIDVVV 166
N E + ++D++V
Sbjct: 70 ANKEECSNLISKTS-NLDILV 89
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 2e-05
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFS-DV 145
+LV G+T G+ + + +G VIA R R ++ + L ++L DV
Sbjct: 3 VLVTGATAGFGECITRRFIQQGHKVIATGR-------RQERLQELKDELGDNLYIAQLDV 55
Query: 146 TNLESLEKSLENLGT---SIDVVV 166
N ++E+ L +L +ID++V
Sbjct: 56 RNRAAIEEMLASLPAEWCNIDILV 79
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-05
Identities = 31/133 (23%), Positives = 48/133 (36%), Gaps = 22/133 (16%)
Query: 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGAS 139
+N IL+ G G+IG + LV+ G V + + E +
Sbjct: 2 QRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV---PPMIPPEGTGKFLEKP 58
Query: 140 VCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWK--IDYEAN----RNSLVA 193
LE E+ L + + +V LAS V S+K +DY N R+ L
Sbjct: 59 -------VLELEERDLSD----VRLVYH-LASH-KSVPRSFKQPLDYLDNVDSGRHLLAL 105
Query: 194 GRNCGASHFVLLS 206
+ G V+ S
Sbjct: 106 CTSVGVPKVVVGS 118
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-05
Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 24/137 (17%)
Query: 76 SSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRND-----KEE 130
SS + IL+ G G +G ++E + +G ++ I D K E
Sbjct: 11 SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVI-----------DNFATGKRE 59
Query: 131 TLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEAN--- 187
L + G SV VT+ LE++ + VV A + D W D N
Sbjct: 60 VLPPVAGLSVIEGSVTDAGLLERAFD--SFKPTHVVHSAA--AYKDPDDWAEDAATNVQG 115
Query: 188 -RNSLVAGRNCGASHFV 203
N A G +
Sbjct: 116 SINVAKAASKAGVKRLL 132
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 8e-05
Identities = 44/217 (20%), Positives = 69/217 (31%), Gaps = 51/217 (23%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
I+V G G+IG +V++LV G+ V+ + SG + E +N A + D+
Sbjct: 2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSG------RREFVN--PSAELHVRDLK 53
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWK---IDYEAN----RNSLVAGRNCGA 199
+ DVV A+ V+ S + + N N L R G
Sbjct: 54 DYSWGAG------IKGDVVFH-FAANP-EVRLSTTEPIVHFNENVVATFNVLEWARQTGV 105
Query: 200 SHFVLLS--AI---CVQKPLLEFQR---------AKLKFEAEMMKVAEEDSGFTYSIVRP 245
V S + P E + AK E M G VR
Sbjct: 106 RTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGE-VMCATYARLFGVRCLAVR- 163
Query: 246 TAFF-----KSLGGQV-----ELVKEGKPYVMFGDGK 272
+ + G + +L + + GDG
Sbjct: 164 --YANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGT 198
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 8e-05
Identities = 14/92 (15%), Positives = 35/92 (38%), Gaps = 11/92 (11%)
Query: 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGAS 139
+ +++ G++ IG+ + G ++ +AR R ++ + LN
Sbjct: 11 GRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLAR-------RVERLKALNLPNTLC 63
Query: 140 VCFSDVTNLESLEKSLENLGT---SIDVVVSC 168
DVT+ + + ++ D +V+
Sbjct: 64 AQV-DVTDKYTFDTAITRAEKIYGPADAIVNN 94
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 8e-05
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 21/81 (25%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
IL++G++G +G V E L + VI R + D+TN
Sbjct: 6 ILLIGASGTLGSAVKERLEKKA-EVITAGRHSGDVTV-------------------DITN 45
Query: 148 LESLEKSLENLGTSIDVVVSC 168
++S++K E +G +D +VS
Sbjct: 46 IDSIKKMYEQVG-KVDAIVSA 65
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 89 LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL 148
+V G+ IG + E G V+AI + + D + +++ G ++ DVT
Sbjct: 217 VVTGAARGIGATIAEVFARDGATVVAIDVDGAA----EDLKRVADKVGGTALT-LDVTAD 271
Query: 149 ES----LEKSLENLGTSIDVVV 166
++ E+ G +D++V
Sbjct: 272 DAVDKITAHVTEHHGGKVDILV 293
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 1e-04
Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 24/124 (19%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+L G GY + + L +G+ +I +R D+ E + + +
Sbjct: 7 TLLSFGH-GYTARVLSRALAPQGWRIIGTSRNP-------DQMEAIRASGAEPLLWPG-- 56
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
E SL+ + ++ A SGG D A +A R LS
Sbjct: 57 ----EEPSLDG----VTHLLISTAPDSGG--D----PVLAALGDQIAARAAQFRWVGYLS 102
Query: 207 AICV 210
V
Sbjct: 103 TTAV 106
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 2e-04
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVT 146
+L+ G++ IG+ L ++G+ V +AR + + L +L+GA DV
Sbjct: 8 VLITGASRGIGEATARLLHAKGYRVGLMAR-------DEKRLQALAAELEGALPLPGDVR 60
Query: 147 NLESLEKSLENLGTS---IDVVV 166
+++ + + + +V
Sbjct: 61 EEGDWARAVAAMEEAFGELSALV 83
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 12/86 (13%), Positives = 35/86 (40%), Gaps = 14/86 (16%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFS--- 143
+ + G+T G+ G++++ R R ++ + L +L +
Sbjct: 24 LFITGATSGFGEACARRFAEAGWSLVLTGR-------REERLQALAGELSAKTRVLPLTL 76
Query: 144 DVTNLESLEKSLENLGT---SIDVVV 166
DV + ++ +++NL ++ ++
Sbjct: 77 DVRDRAAMSAAVDNLPEEFATLRGLI 102
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 17/108 (15%)
Query: 64 PITASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIR 123
+ A T + + LV G+TG IG+ + ++G V + +
Sbjct: 11 TLEAQTQGPGSMFKLTGRK-----ALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKL- 64
Query: 124 GRNDKEETLNQLQG-ASVCFSDVTNLES----LEKSLENLGTSIDVVV 166
+E L V +++++ +S E + + ID++V
Sbjct: 65 -----KEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREME-GIDILV 106
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 18/105 (17%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 46 HVNSSQPFKLSTSSKRFNPITASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEEL 105
V++ P T + ++ + + + + + + GS G +G+ + +L
Sbjct: 108 SVSTRLPASTLTGMFAYRQTQLIEDLKFLSRTSTLFDGSPLTVAITGSRGLVGRALTAQL 167
Query: 106 VSRGFNVIAIAREKSGIRGR--NDKEETLNQLQGASVCFSDVTNL 148
+ G VI + R++ R + + L GA V + +L
Sbjct: 168 QTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADV----LVHL 208
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 2e-04
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 87 NILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
N+L++GS G++ + V++ L + NV R + L + G+ DV
Sbjct: 25 NVLLLGS-GFVAQPVIDTLAANDDINVTVACRTL-------ANAQALAKPSGSKAISLDV 76
Query: 146 TNLESLEKSLENLGTSIDVVVSCL 169
T+ +L+K L DVV+S +
Sbjct: 77 TDDSALDKVLA----DNDVVISLI 96
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 3e-04
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 20/120 (16%)
Query: 65 ITASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSR---GFNVIAIAREKSG 121
I A T A + + +L+ G+TG++G+++V EL+ R +I + R +S
Sbjct: 55 IDADTLATAVNLPGPSPELR--TVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESD 112
Query: 122 IRGRNDKEETLNQLQGASVCFSDVTNLESLE-----KSLENLG----------TSIDVVV 166
R E+T + + + LE KS +LG ++D++V
Sbjct: 113 EDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIV 172
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 19/91 (20%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ----GASVCF 142
N++ V + G IG ELV R I R + L +L+ ++ F
Sbjct: 7 NVIFVAALGGIGLDTSRELVKRNLKNFVILD-------RVENPTALAELKAINPKVNITF 59
Query: 143 --SDVTNLES-----LEKSLENLGTSIDVVV 166
DVT + L+K + L T +D+++
Sbjct: 60 HTYDVTVPVAESKKLLKKIFDQLKT-VDILI 89
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 17/98 (17%)
Query: 76 SSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAI-----AREKSGIRGRNDKEE 130
++ +LV G GYIG V EL+ G++ + + S R
Sbjct: 2 TAQLQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVAR------- 54
Query: 131 TLNQLQGASVCF--SDVTNLESLEKSLENLGTSIDVVV 166
L L + F D+ + + LEK + ID V+
Sbjct: 55 -LEVLTKHHIPFYEVDLCDRKGLEKVFKE--YKIDSVI 89
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 4e-04
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 89 LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL 148
LV G+ IG+ V+ L + G V+A++R ++ D + + + G D+ +
Sbjct: 11 LVTGAGKGIGRGTVQALHATGARVVAVSRTQA------DLDSLVRECPGIEPVCVDLGDW 64
Query: 149 ESLEKSLENLGTSIDVVV 166
E+ E++L ++G +D++V
Sbjct: 65 EATERALGSVG-PVDLLV 81
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 40.5 bits (96), Expect = 4e-04
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 89 LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL 148
LV G+ IG+ V+ L + G V+A+ R S + + G D+ +
Sbjct: 11 LVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL------VSLAKECPGIEPVCVDLGDW 64
Query: 149 ESLEKSLENLGTSIDVVV 166
++ EK+L +G +D++V
Sbjct: 65 DATEKALGGIG-PVDLLV 81
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 5e-04
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 18/88 (20%)
Query: 89 LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQG------ASVCF 142
LV G T IG +VEE G + AR + + E L++ Q SVC
Sbjct: 18 LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYEL------NECLSKWQKKGFQVTGSVC- 70
Query: 143 SDVTNLESLEK----SLENLGTSIDVVV 166
D + EK G +D+++
Sbjct: 71 -DASLRPEREKLMQTVSSMFGGKLDILI 97
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 5e-04
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGA----SVCFS 143
+ V G TG++G ++++ L+ G++V R R L L GA +
Sbjct: 4 VCVTGGTGFLGSWIIKSLLENGYSVNTTIRADP---ERKRDVSFLTNLPGASEKLHFFNA 60
Query: 144 DVTNLESLE 152
D++N +S
Sbjct: 61 DLSNPDSFA 69
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 6e-04
Identities = 29/139 (20%), Positives = 51/139 (36%), Gaps = 30/139 (21%)
Query: 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGAS-VCF 142
+++ I + G+ G+I + L G VIA K E + +
Sbjct: 28 ENLKISITGAGGFIASHIARRLKHEGHYVIAS---------DWKKNEHMTEDMFCDEFHL 78
Query: 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGV-----------KDSWKIDYEANRNSL 191
D+ +E+ K E +D V + LA+ GG+ ++ I + N +
Sbjct: 79 VDLRVMENCLKVTEG----VDHVFN-LAADMGGMGFIQSNHSVIMYNNTMI----SFNMI 129
Query: 192 VAGRNCGASHFVLLSAICV 210
A R G F S+ C+
Sbjct: 130 EAARINGIKRFFYASSACI 148
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 6e-04
Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 87 NILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS- 143
+++V G+ IG +V++LV ++IA AR +K L ++ + V
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR-------DVEKATELKSIKDSRVHVLP 57
Query: 144 -DVTNLESLEKSLENL-----GTSIDVVV 166
VT +SL+ + + + +++
Sbjct: 58 LTVTCDKSLDTFVSKVGEIVGSDGLSLLI 86
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGAS--- 139
P+ +LV G+ G++ VVE+L+ G+ V AR S + + +
Sbjct: 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSAS----KLANLQKRWDAKYPGRFE 64
Query: 140 -VCFSDVTNLESLEKSLE 156
D+ + ++ ++
Sbjct: 65 TAVVEDMLKQGAYDEVIK 82
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 405 | |||
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.98 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.98 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.98 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.98 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.98 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.97 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.97 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.97 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.97 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.97 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.97 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.97 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.97 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.97 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.97 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.97 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.97 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.97 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.97 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.97 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.97 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.96 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.96 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.96 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.96 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.96 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.96 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.96 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.96 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.96 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.96 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.96 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.96 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.96 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.96 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.95 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.95 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.95 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.95 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.94 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.94 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.94 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.94 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.93 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.92 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.92 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.92 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.92 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.92 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.92 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.92 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.91 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.91 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.91 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.91 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.91 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.91 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.91 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.91 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.9 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.9 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.9 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.9 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.9 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.9 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.9 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.9 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.9 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.9 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.9 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.9 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.9 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.9 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.9 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.9 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.9 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.89 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.89 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.89 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.89 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.89 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.89 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.89 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.89 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.89 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.89 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.89 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.89 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.89 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.89 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.89 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.89 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.89 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.89 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.89 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.89 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.89 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.89 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.89 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.89 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.89 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.89 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.89 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.89 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.89 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.88 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.88 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.88 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.88 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.88 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.88 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.88 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.88 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.88 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.88 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.88 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.88 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.88 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.88 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.88 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.88 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.88 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.88 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.88 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.88 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.88 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.88 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.88 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.88 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.88 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.88 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.88 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.88 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.88 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.88 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.88 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.88 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.88 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.88 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.88 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.88 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.88 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.88 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.88 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.88 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.88 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.88 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.88 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.88 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.88 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.88 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.88 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.88 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.88 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.88 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.88 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.88 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.88 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.88 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.87 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.87 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.87 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.87 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.87 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.87 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.87 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.87 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.87 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.87 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.87 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.87 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.87 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.87 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.87 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.87 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.87 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.87 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.87 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.87 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.87 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.87 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.87 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.87 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.87 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.87 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.87 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.87 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.87 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.87 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.87 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.87 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.87 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.87 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.87 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.87 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.87 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.86 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.86 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.86 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.86 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.86 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.86 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.86 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.86 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.86 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.86 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.86 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.86 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.86 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.86 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.86 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.86 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.86 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.86 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.86 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.86 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.86 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.86 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.86 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.86 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.86 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.86 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.86 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.86 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.85 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.85 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.85 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.85 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.85 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.85 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.85 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.85 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.85 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.85 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.85 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.85 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.85 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.85 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.84 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.84 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.84 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.84 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.84 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.84 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.83 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.82 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.82 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.82 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.82 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.81 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.8 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.79 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.79 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.79 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.79 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.78 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.74 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.73 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.71 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.71 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.69 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.69 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.68 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.68 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.67 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.63 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.63 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.62 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.6 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.59 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.58 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.58 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.38 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.34 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.31 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.16 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 99.04 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 99.02 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.93 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.89 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.88 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.87 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.81 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.8 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.79 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.69 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.64 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.64 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.62 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.56 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.55 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.55 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.41 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.39 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.35 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.33 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.29 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.28 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.19 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 98.1 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.1 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.04 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 98.0 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.95 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.94 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.91 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.83 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.82 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.77 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.76 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.74 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.73 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.7 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.7 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.69 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.69 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.69 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.67 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.67 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.65 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.63 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.63 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.61 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.56 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.55 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.52 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.52 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.51 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.49 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.47 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.47 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.46 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.45 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 97.45 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.44 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.44 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.44 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 97.44 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 97.43 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.42 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.41 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.41 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.41 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.4 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.39 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.39 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.38 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.37 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.37 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.37 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.36 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.34 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.34 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.31 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.3 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.29 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.28 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.27 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.25 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.24 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.23 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.22 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.22 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.2 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.19 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.17 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.15 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.14 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 97.13 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.12 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.11 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.1 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.07 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.06 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.06 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 97.05 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 97.02 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.02 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.01 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.01 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.01 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.97 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.97 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 96.97 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 96.93 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 96.93 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 96.93 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 96.92 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.91 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 96.9 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 96.89 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 96.89 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 96.88 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 96.83 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 96.82 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 96.82 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 96.81 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 96.81 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.79 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.79 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.79 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 96.76 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.75 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.75 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 96.73 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.73 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.71 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 96.7 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.7 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 96.7 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 96.7 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.69 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.67 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 96.67 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 96.66 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.65 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 96.65 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.61 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 96.61 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.59 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.59 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.59 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 96.59 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 96.58 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.56 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 96.56 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.56 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 96.55 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 96.55 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.54 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.54 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.53 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.53 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.53 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 96.52 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.52 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.51 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 96.5 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 96.5 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.49 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 96.49 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.48 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.48 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.47 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 96.46 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 96.46 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.46 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 96.45 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.44 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.43 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 96.41 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.39 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.39 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 96.39 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.38 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.36 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.34 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 96.34 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.34 |
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=283.46 Aligned_cols=257 Identities=20% Similarity=0.242 Sum_probs=207.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+|||||||||||++|+++|+++|++|++++|++... . ..+++++.+|++ ++++.+++++ +|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~-~~~~~~~~~Dl~-~~~~~~~~~~----~d~ 65 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK----------A-INDYEYRVSDYT-LEDLINQLND----VDA 65 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTTT----CSE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc----------c-CCceEEEEcccc-HHHHHHhhcC----CCE
Confidence 47999999999999999999999999999999984321 1 238999999999 9999999998 999
Q ss_pred EEEcccccCC-CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHHHHHH
Q 043385 165 VVSCLASRSG-GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFEAEMM 229 (405)
Q Consensus 165 Vv~~a~~~~~-~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E~~~~ 229 (405)
|||+|+.... ++...+++|+.++.+++++|++.+++||||+||.++|. |.+.|+.+|.++|++++
T Consensus 66 Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 145 (311)
T 3m2p_A 66 VVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGN 145 (311)
T ss_dssp EEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred EEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Confidence 9999997644 56678899999999999999999999999999998872 45789999999999999
Q ss_pred HHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeee------hh------hcccccccceEec
Q 043385 230 KVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCA------YC------VLSEDKINQILPI 290 (405)
Q Consensus 230 ~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~------~~------~~~~~~~~~~y~i 290 (405)
.++. +.+++++++||+.+|||.. .++..+..+.++.++|++.+.+ ++ +......+++||+
T Consensus 146 ~~~~-~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i 224 (311)
T 3m2p_A 146 IYSR-KKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNI 224 (311)
T ss_dssp HHHH-HSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEE
T ss_pred HHHH-HcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEe
Confidence 9876 5799999999999999853 3456677788888888877654 11 1122237889999
Q ss_pred cCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccc
Q 043385 291 GGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYS 370 (405)
Q Consensus 291 ~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 370 (405)
+++ +.+|+.|+++.+.+.+|.+..+...|.+ .. . ......+|.++++..
T Consensus 225 ~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------------~~--------~-------~~~~~~~d~~k~~~~ 273 (311)
T 3m2p_A 225 GSG-DALTNYEVANTINNAFGNKDNLLVKNPN---------------AN--------E-------GIHSSYMDSSKAKEL 273 (311)
T ss_dssp CCS-CEECHHHHHHHHHHHTTCTTCEEECSSS---------------BC--------C-------SCCCBCBCCHHHHHH
T ss_pred CCC-CcccHHHHHHHHHHHhCCCCcceecCCC---------------CC--------C-------CcCceecCHHHHHHH
Confidence 986 8999999999999999998888776653 00 0 112234788889989
Q ss_pred cccCCccchhhHHHHHHHHhhc
Q 043385 371 AEKTPSYGKDTLEEFFERVLRE 392 (405)
Q Consensus 371 lg~~P~~~~~~l~~~~~~~~~~ 392 (405)
|||+|.+ ++++.+++.++.
T Consensus 274 lG~~p~~---~~~~~l~~~~~~ 292 (311)
T 3m2p_A 274 LDFSTDY---NFATAVEEIHLL 292 (311)
T ss_dssp SCCCCSC---CHHHHHHHHHHH
T ss_pred hCCCccc---CHHHHHHHHHHH
Confidence 9999954 566666665554
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=293.53 Aligned_cols=223 Identities=17% Similarity=0.307 Sum_probs=184.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCC-CHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT-NLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~l~~~~~~~~ 159 (405)
.+++|+|||||||||||++|+++|+++ |++|++++|++.+.. .+...++++++.+|++ |.+.+.+++++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~v~~~~~Dl~~d~~~~~~~~~~-- 91 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLG-------DLVKHERMHFFEGDITINKEWVEYHVKK-- 91 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTG-------GGGGSTTEEEEECCTTTCHHHHHHHHHH--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhh-------hhccCCCeEEEeCccCCCHHHHHHHhcc--
Confidence 356789999999999999999999998 999999999876542 2223358999999999 99999999998
Q ss_pred CCccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------------C
Q 043385 160 TSIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------------P 213 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------------~ 213 (405)
+|+|||||+.... ++.+.+++|+.++.+++++|++.+ +||||+||.++|. |
T Consensus 92 --~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p 168 (372)
T 3slg_A 92 --CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKP 168 (372)
T ss_dssp --CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCT
T ss_pred --CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCC
Confidence 9999999997542 445678999999999999999999 9999999998872 2
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch---------------HHHHHHHhCCCeEEecCCeeee---
Q 043385 214 LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG---------------GQVELVKEGKPYVMFGDGKLCA--- 275 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~---------------~~~~~~~~g~~~~~~g~g~~~~--- 275 (405)
.+.|+.+|.++|++++.++. . +++++++||+++|||.. .++..+..+.++.++++|.+.+
T Consensus 169 ~~~Y~~sK~~~E~~~~~~~~-~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 246 (372)
T 3slg_A 169 RWIYACSKQLMDRVIWGYGM-E-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFT 246 (372)
T ss_dssp THHHHHHHHHHHHHHHHHHT-T-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECE
T ss_pred CCcHHHHHHHHHHHHHHHHH-C-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEE
Confidence 33799999999999999887 3 99999999999999862 3456677899998888887655
Q ss_pred ----------hhhcccc--cccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeee
Q 043385 276 ----------YCVLSED--KINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLK 318 (405)
Q Consensus 276 ----------~~~~~~~--~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~ 318 (405)
.++..+. ..+++||++++|+.+|+.|+++.+.+.+|.+.++..
T Consensus 247 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~ 301 (372)
T 3slg_A 247 YVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYAD 301 (372)
T ss_dssp EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHH
T ss_pred EHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCccccc
Confidence 1222233 568999999844799999999999999998765543
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-36 Score=288.83 Aligned_cols=270 Identities=17% Similarity=0.148 Sum_probs=205.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc------CCcEEEEcCCCCHHHHHHHHH
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL------QGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~------~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
+++|+|||||||||||++|+++|+++|++|++++|....... ....+... .+++++.+|++|++++.++++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 99 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQY---NLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK 99 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHH---HHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchh---hhhhhhhccccccCCceEEEEccCCCHHHHHHHhc
Confidence 457899999999999999999999999999999998764321 11111111 589999999999999999999
Q ss_pred hhCCCccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------------CCChhH
Q 043385 157 NLGTSIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------------KPLLEF 217 (405)
Q Consensus 157 ~~~~~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------------~~~~~y 217 (405)
+ +|+|||+|+... .++...+++|+.++.+++++|++.++++|||+||.++| .|.+.|
T Consensus 100 ~----~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y 175 (351)
T 3ruf_A 100 G----VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPY 175 (351)
T ss_dssp T----CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHH
T ss_pred C----CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChh
Confidence 8 999999999643 24456789999999999999999999999999999987 235789
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----------HHHHHHHhCCCeEEecCCeeeeh----------
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----------GQVELVKEGKPYVMFGDGKLCAY---------- 276 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----------~~~~~~~~g~~~~~~g~g~~~~~---------- 276 (405)
+.+|..+|++++.++. ..|++++++||+++|||.. .++..+..+.++.++|+|.+.++
T Consensus 176 ~~sK~~~E~~~~~~~~-~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 254 (351)
T 3ruf_A 176 AVTKYVNEIYAQVYAR-TYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQM 254 (351)
T ss_dssp HHHHHHHHHHHHHHHH-HHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHH
Confidence 9999999999998876 4699999999999999852 35666778999888998877651
Q ss_pred ---hhcc-cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhh
Q 043385 277 ---CVLS-EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGR 352 (405)
Q Consensus 277 ---~~~~-~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (405)
++.. +...+++||++++ +.+|+.|+++.+.+.+|.+......+... .+. ..+
T Consensus 255 ~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~--------------~~~-----~~~---- 310 (351)
T 3ruf_A 255 NILSALAKDSAKDNIYNVAVG-DRTTLNELSGYIYDELNLIHHIDKLSIKY--------------REF-----RSG---- 310 (351)
T ss_dssp HHHHHTCCGGGCSEEEEESCS-CCEEHHHHHHHHHHHHHTTCCC-----EE--------------ECC-----CTT----
T ss_pred HHHHHhhccccCCCEEEeCCC-CcccHHHHHHHHHHHhCcccccccccccc--------------cCC-----CCC----
Confidence 1222 3467899999986 89999999999999999854433222110 000 000
Q ss_pred hhhhhhhcccCccccccccccCCccchhhHHHHHHHHh
Q 043385 353 YYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVL 390 (405)
Q Consensus 353 ~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~ 390 (405)
......+|.++++..|||.|.+ ++++.+++.+
T Consensus 311 ---~~~~~~~d~~k~~~~lG~~p~~---~~~~~l~~~~ 342 (351)
T 3ruf_A 311 ---DVRHSQADVTKAIDLLKYRPNI---KIREGLRLSM 342 (351)
T ss_dssp ---CCSBCCBCCHHHHHHHCCCCCC---CHHHHHHHHH
T ss_pred ---ccceeeeCHHHHHHHhCCCCCC---CHHHHHHHHH
Confidence 1123347888999999999965 3444444433
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=284.55 Aligned_cols=270 Identities=18% Similarity=0.228 Sum_probs=202.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+++|+|||||||||||++|+++|+++| ++|++++|...... ...+..+...++++++.+|++|++.+.+++++
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 96 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE-- 96 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH--
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh--
Confidence 3567899999999999999999999999 77888887653221 11112222235899999999999999999987
Q ss_pred CCccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC---------------ChhHHH
Q 043385 160 TSIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP---------------LLEFQR 219 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~---------------~~~y~~ 219 (405)
.++|+|||+|+... .++...+++|+.++.+++++|++.+++||||+||.++|.. .+.|+.
T Consensus 97 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~ 176 (346)
T 4egb_A 97 RDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSS 176 (346)
T ss_dssp HTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHH
T ss_pred cCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHH
Confidence 35899999999753 2455688999999999999999999999999999988742 378999
Q ss_pred HHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeeehhh------------cc
Q 043385 220 AKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCAYCV------------LS 280 (405)
Q Consensus 220 sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~~~~------------~~ 280 (405)
+|.++|++++.++. ..|++++++||+++|||.. .++..+..+.++.++|++.+.++++ ..
T Consensus 177 sK~~~E~~~~~~~~-~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 255 (346)
T 4egb_A 177 SKASADMIALAYYK-TYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 255 (346)
T ss_dssp HHHHHHHHHHHHHH-HHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence 99999999999886 4699999999999999853 3566778888888889887765111 12
Q ss_pred cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCe-eecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhh
Q 043385 281 EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKF-LKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESM 359 (405)
Q Consensus 281 ~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (405)
....+++||++++ +.+++.|+++.+.+.+|.+.+. ...+.. .+ ....
T Consensus 256 ~~~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~------------------------~~-------~~~~ 303 (346)
T 4egb_A 256 KGRVGEVYNIGGN-NEKTNVEVVEQIITLLGKTKKDIEYVTDR------------------------LG-------HDRR 303 (346)
T ss_dssp HCCTTCEEEECCS-CCEEHHHHHHHHHHHHTCCGGGCEEECC--------------------------C-------CCSC
T ss_pred cCCCCCEEEECCC-CceeHHHHHHHHHHHhCCCcccccccCCC------------------------CC-------Ccce
Confidence 2346789999986 8899999999999999987542 222211 00 0112
Q ss_pred cccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 360 LILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 360 ~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
+.+|.++++..|||+|.+ ++++.+++.++
T Consensus 304 ~~~d~~k~~~~lG~~p~~---~~~e~l~~~~~ 332 (346)
T 4egb_A 304 YAINAEKMKNEFDWEPKY---TFEQGLQETVQ 332 (346)
T ss_dssp CCBCCHHHHHHHCCCCCC---CHHHHHHHHHH
T ss_pred eeccHHHHHHHcCCCCCC---CHHHHHHHHHH
Confidence 336888888899999965 34444444433
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-35 Score=278.64 Aligned_cols=280 Identities=13% Similarity=0.157 Sum_probs=204.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+|||||||||||++|+++|+++|++|++++|++.+.. .+.. .+++++.+|++|++++.+++++ +|+
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~l~~-~~~~~~~~Dl~d~~~~~~~~~~----~d~ 80 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ-------RLAY-LEPECRVAEMLDHAGLERALRG----LDG 80 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG-------GGGG-GCCEEEECCTTCHHHHHHHTTT----CSE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh-------hhcc-CCeEEEEecCCCHHHHHHHHcC----CCE
Confidence 469999999999999999999999999999999876532 1222 3789999999999999999988 999
Q ss_pred EEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC-------------------ChhHHHHHH
Q 043385 165 VVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP-------------------LLEFQRAKL 222 (405)
Q Consensus 165 Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~-------------------~~~y~~sK~ 222 (405)
|||+|+... .++.+.+++|+.++.+++++|++.+++||||+||.++|.+ .+.|+.+|.
T Consensus 81 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~ 160 (342)
T 2x4g_A 81 VIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKW 160 (342)
T ss_dssp EEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHH
T ss_pred EEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHH
Confidence 999999653 3456788999999999999999999999999999998731 668999999
Q ss_pred HHHHHHHHHhhhcCCceEEEEecCCcccCch------HHHHHHHhCCCeEEecCCeeee-----------hhhccccccc
Q 043385 223 KFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG------GQVELVKEGKPYVMFGDGKLCA-----------YCVLSEDKIN 285 (405)
Q Consensus 223 ~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~------~~~~~~~~g~~~~~~g~g~~~~-----------~~~~~~~~~~ 285 (405)
++|++++.++. . |++++++||+++|||.. .++..+..|.+..+ ++....+ .++..+. .+
T Consensus 161 ~~e~~~~~~~~-~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~~~~~~~~~~~-~g 236 (342)
T 2x4g_A 161 ALDEQAREQAR-N-GLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY-VAGQRNVIDAAEAGRGLLMALERGR-IG 236 (342)
T ss_dssp HHHHHHHHHHH-T-TCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE-ECCEEEEEEHHHHHHHHHHHHHHSC-TT
T ss_pred HHHHHHHHHhh-c-CCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc-cCCCcceeeHHHHHHHHHHHHhCCC-CC
Confidence 99999999886 4 99999999999999854 35566677776654 4433222 1222222 38
Q ss_pred ceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCcc
Q 043385 286 QILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPE 365 (405)
Q Consensus 286 ~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 365 (405)
++||++++ + +|+.|+++.+.+.+|.+.++ .+|.+.....+.+.+++....... ..... ..... ......+|.+
T Consensus 237 ~~~~v~~~-~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~--~~~~~~~d~~ 309 (342)
T 2x4g_A 237 ERYLLTGH-N-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQL-PLLDE-TAIEV--MAGGQFLDGR 309 (342)
T ss_dssp CEEEECCE-E-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC------------------CC--TTCCCCBCCH
T ss_pred ceEEEcCC-c-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCC-CCCCH-HHHHH--HhcCcccChH
Confidence 89999986 7 99999999999999999888 899988776665554443221100 00000 00000 1123446888
Q ss_pred cccccccc-CCccchhhHHHHHHHHhh
Q 043385 366 TGEYSAEK-TPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 366 ~~~~~lg~-~P~~~~~~l~~~~~~~~~ 391 (405)
+++..+|| .| .++++.+++.++
T Consensus 310 k~~~~lG~~~p----~~~~~~l~~~~~ 332 (342)
T 2x4g_A 310 KAREELGFFST----TALDDTLLRAID 332 (342)
T ss_dssp HHHHHHCCCCC----SCHHHHHHHHHH
T ss_pred HHHHhCCCCCC----CCHHHHHHHHHH
Confidence 88888999 99 455566655554
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=284.85 Aligned_cols=254 Identities=17% Similarity=0.144 Sum_probs=201.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
...++|+|||||||||||++|+++|+++|++|++++|++.. .+++++.+|++|++.+.+++++
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~--- 77 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIMG--- 77 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHTT---
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHhC---
Confidence 35677899999999999999999999999999999998753 3788999999999999999998
Q ss_pred CccEEEEcccccCCC---CcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC----------------CChhHHHHH
Q 043385 161 SIDVVVSCLASRSGG---VKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK----------------PLLEFQRAK 221 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~---~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~----------------~~~~y~~sK 221 (405)
+|+|||+|+..... +...+++|+.++.+++++|++.++++|||+||.++|. |.+.|+.+|
T Consensus 78 -~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK 156 (347)
T 4id9_A 78 -VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTK 156 (347)
T ss_dssp -CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred -CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHH
Confidence 99999999976432 2568899999999999999999999999999988873 456799999
Q ss_pred HHHHHHHHHHhhhcCCceEEEEecCCcc-------------cCc--------------hH----HHHHHHhCCCeEEecC
Q 043385 222 LKFEAEMMKVAEEDSGFTYSIVRPTAFF-------------KSL--------------GG----QVELVKEGKPYVMFGD 270 (405)
Q Consensus 222 ~~~E~~~~~~~~~~~gi~~~ilRp~~v~-------------g~~--------------~~----~~~~~~~g~~~~~~g~ 270 (405)
..+|++++.++. ..+++++++||+++| ||. .. ++..+..+.++.++|+
T Consensus 157 ~~~E~~~~~~~~-~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 235 (347)
T 4id9_A 157 LLGEELVRFHQR-SGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILAR 235 (347)
T ss_dssp HHHHHHHHHHHH-HSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEE
T ss_pred HHHHHHHHHHHH-hcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCC
Confidence 999999998876 479999999999999 765 12 3445566777777877
Q ss_pred Ceeeehh-----------------hcccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHH
Q 043385 271 GKLCAYC-----------------VLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDF 333 (405)
Q Consensus 271 g~~~~~~-----------------~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~ 333 (405)
+.+.+++ +..+...+++||++++ +.+|+.|+++.+.+.+|.+.++..+|.+..
T Consensus 236 ~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~--------- 305 (347)
T 4id9_A 236 NENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGAD-EPADFAALLPKIAALTGLPIVTVDFPGDGV--------- 305 (347)
T ss_dssp CTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCS-SCEEHHHHHHHHHHHHCCCEEEEECSSCCC---------
T ss_pred CCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCC-CcccHHHHHHHHHHHhCCCCceeeCCCccc---------
Confidence 6543322 2233356889999986 899999999999999999877766664310
Q ss_pred HHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 334 LVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
...+|.++++..|||.|.+ ++++.+++.++
T Consensus 306 -------------------------~~~~d~~k~~~~lG~~p~~---~~~~~l~~~~~ 335 (347)
T 4id9_A 306 -------------------------YYHTSNERIRNTLGFEAEW---TMDRMLEEAAT 335 (347)
T ss_dssp -------------------------BCCBCCHHHHHHHCCCCCC---CHHHHHHHHHH
T ss_pred -------------------------ccccCHHHHHHHhCCCCCC---CHHHHHHHHHH
Confidence 2336888888899999965 44444444443
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=274.78 Aligned_cols=269 Identities=17% Similarity=0.202 Sum_probs=202.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|+|||||||||||++++++|+++|++|++++|+..+............ ..+++++.+|++|++++.++++. .++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~--~~~d 80 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA--HPIT 80 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH--SCCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc--cCCc
Confidence 45799999999999999999999999999999998766432111111111 24789999999999999999984 3499
Q ss_pred EEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHH
Q 043385 164 VVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKF 224 (405)
Q Consensus 164 ~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~ 224 (405)
+|||||+.... ...+.+++|+.++.+++++|++.++++|||+||.++|. |.+.|+.+|.++
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~ 160 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMA 160 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHH
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence 99999997532 34467889999999999999999999999999998872 336899999999
Q ss_pred HHHHHHHhhhcCCceEEEEecCCcccCch-------------H---HHHHHHhC--CCeEEec------CCeeeehh---
Q 043385 225 EAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------------G---QVELVKEG--KPYVMFG------DGKLCAYC--- 277 (405)
Q Consensus 225 E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------------~---~~~~~~~g--~~~~~~g------~g~~~~~~--- 277 (405)
|++++.++.+..+++++++||+++|||.. . ++.....+ .++.++| +|.+.+++
T Consensus 161 e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 240 (341)
T 3enk_A 161 EQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHV 240 (341)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEH
T ss_pred HHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEH
Confidence 99999988744469999999999999842 1 23333333 4566667 66665511
Q ss_pred ----------hcc--cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhh
Q 043385 278 ----------VLS--EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAA 345 (405)
Q Consensus 278 ----------~~~--~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (405)
+.. +...+++||++++ +.+|+.|+++.+.+.+|.+.++...|...
T Consensus 241 ~Dva~a~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~---------------------- 297 (341)
T 3enk_A 241 VDLARGHIAALDALERRDASLTVNLGTG-RGYSVLEVVRAFEKASGRAVPYELVARRP---------------------- 297 (341)
T ss_dssp HHHHHHHHHHHHHHHHHTSCEEEEESCS-CCEEHHHHHHHHHHHHCSCCCEEEECCCT----------------------
T ss_pred HHHHHHHHHHHHhhhcCCcceEEEeCCC-CceeHHHHHHHHHHHhCCCcceeeCCCCC----------------------
Confidence 112 2356889999985 89999999999999999988876655320
Q ss_pred hhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHh
Q 043385 346 EFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVL 390 (405)
Q Consensus 346 ~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~ 390 (405)
+. ......|.+++++.|||+|.+. +++.+++.+
T Consensus 298 --~~-------~~~~~~d~~k~~~~lG~~p~~~---l~~~l~~~~ 330 (341)
T 3enk_A 298 --GD-------VAECYANPAAAAETIGWKAERD---LERMCADHW 330 (341)
T ss_dssp --TC-------CSEECBCCHHHHHHHCCCCCCC---HHHHHHHHH
T ss_pred --CC-------ccccccCHHHHHHHcCCCCCCC---HHHHHHHHH
Confidence 00 0123368888888999999653 444444433
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-34 Score=276.56 Aligned_cols=249 Identities=19% Similarity=0.220 Sum_probs=198.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|+|||||||||||++|+++|+++|++|++++|++.+... .. ..+++++.+|++|++++.+++++ +|
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~-~~~v~~~~~Dl~d~~~~~~~~~~----~d 95 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-------ED-MFCDEFHLVDLRVMENCLKVTEG----VD 95 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-------GG-GTCSEEEECCTTSHHHHHHHHTT----CS
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh-------hc-cCCceEEECCCCCHHHHHHHhCC----CC
Confidence 56899999999999999999999999999999998765321 11 24789999999999999999987 99
Q ss_pred EEEEcccccC------CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------------CChh
Q 043385 164 VVVSCLASRS------GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------------PLLE 216 (405)
Q Consensus 164 ~Vv~~a~~~~------~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------------~~~~ 216 (405)
+|||||+... .++.+.+++|+.++.+++++|++.++++|||+||.++|. |.+.
T Consensus 96 ~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~ 175 (379)
T 2c5a_A 96 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDA 175 (379)
T ss_dssp EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSH
T ss_pred EEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCCh
Confidence 9999999653 345567899999999999999999999999999988763 2457
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----------HHHHHHHhCCC-eEEecCCeeeehhhc-----
Q 043385 217 FQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----------GQVELVKEGKP-YVMFGDGKLCAYCVL----- 279 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----------~~~~~~~~g~~-~~~~g~g~~~~~~~~----- 279 (405)
|+.+|.++|++++.++. ..+++++++||+++|||.. .++..+..+.+ +.+++++.+.+.+++
T Consensus 176 Y~~sK~~~E~~~~~~~~-~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva 254 (379)
T 2c5a_A 176 FGLEKLATEELCKHYNK-DFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 254 (379)
T ss_dssp HHHHHHHHHHHHHHHHH-HHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHH
T ss_pred hHHHHHHHHHHHHHHHH-HHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHH
Confidence 99999999999998876 4689999999999999852 24555666766 777888776551111
Q ss_pred ------ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhh
Q 043385 280 ------SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRY 353 (405)
Q Consensus 280 ------~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (405)
.....+++||++++ +.+|+.|+++.+.+.+|.+.++..+|.+. +
T Consensus 255 ~ai~~~l~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p~~~------------------------~----- 304 (379)
T 2c5a_A 255 EGVLRLTKSDFREPVNIGSD-EMVSMNEMAEMVLSFEEKKLPIHHIPGPE------------------------G----- 304 (379)
T ss_dssp HHHHHHHHSSCCSCEEECCC-CCEEHHHHHHHHHHTTTCCCCEEEECCCC------------------------C-----
T ss_pred HHHHHHhhccCCCeEEeCCC-CccCHHHHHHHHHHHhCCCCceeeCCCCC------------------------C-----
Confidence 01125789999986 89999999999999999988777666431 0
Q ss_pred hhhhhhcccCccccccccccCCccc
Q 043385 354 YAAESMLILDPETGEYSAEKTPSYG 378 (405)
Q Consensus 354 ~~~~~~~~~d~~~~~~~lg~~P~~~ 378 (405)
.....+|.++++..|||+|++.
T Consensus 305 ---~~~~~~d~~k~~~~lG~~p~~~ 326 (379)
T 2c5a_A 305 ---VRGRNSDNNLIKEKLGWAPNMR 326 (379)
T ss_dssp ---CSBCEECCHHHHHHHSCCCCCC
T ss_pred ---cccccCCHHHHHHHhCCCCCCC
Confidence 0012357888888999999754
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=274.19 Aligned_cols=262 Identities=21% Similarity=0.222 Sum_probs=195.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|||||||||||++|+++|+++|++|++++|++.... ... ..+++++.+|+.|.+ +.+++++ |+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~-~~~~~~~~~Dl~d~~-~~~~~~~-----d~v 66 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR-------EFV-NPSAELHVRDLKDYS-WGAGIKG-----DVV 66 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCG-------GGS-CTTSEEECCCTTSTT-TTTTCCC-----SEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCch-------hhc-CCCceEEECccccHH-HHhhcCC-----CEE
Confidence 68999999999999999999999999999999876542 111 257899999999988 7766552 999
Q ss_pred EEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHHH
Q 043385 166 VSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFEA 226 (405)
Q Consensus 166 v~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E~ 226 (405)
||||+... .++...+++|+.++.+++++|++.++++|||+||.++|. |.+.|+.+|.++|+
T Consensus 67 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~ 146 (312)
T 3ko8_A 67 FHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEV 146 (312)
T ss_dssp EECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred EECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Confidence 99999643 234557899999999999999999999999999998872 45789999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCch------HHHHHHHhC-CCeEEecCCeeee-------------hhhcc---ccc
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSLG------GQVELVKEG-KPYVMFGDGKLCA-------------YCVLS---EDK 283 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~~------~~~~~~~~g-~~~~~~g~g~~~~-------------~~~~~---~~~ 283 (405)
+++.++. +.|++++++||+++|||.. .++..+..+ .++..++++.+.+ .++.. ...
T Consensus 147 ~~~~~~~-~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~ 225 (312)
T 3ko8_A 147 MCATYAR-LFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDA 225 (312)
T ss_dssp HHHHHHH-HHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHH-HhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCC
Confidence 9999886 4599999999999999852 345555555 5666788887655 11222 245
Q ss_pred ccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccC
Q 043385 284 INQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILD 363 (405)
Q Consensus 284 ~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 363 (405)
.+++||++++ +.+|+.|+++.+.+.+|.+.++..+|...... +. ........+|
T Consensus 226 ~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~---------------------~~----~~~~~~~~~d 279 (312)
T 3ko8_A 226 PFLALNVGNV-DAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGR---------------------GW----PGDVKYMTLA 279 (312)
T ss_dssp SEEEEEESCS-SCEEHHHHHHHHHHHHTCCCEEEEC-----------------------------------CCCSEECBC
T ss_pred CCcEEEEcCC-CceeHHHHHHHHHHHhCCCCceeecCcccccc---------------------CC----CCCccccccC
Confidence 6789999986 89999999999999999988777766532100 00 0011223478
Q ss_pred ccccccccccCCccchhhHHHHHHHHhh
Q 043385 364 PETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 364 ~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
.++++..|||+|++ ++++.+++.++
T Consensus 280 ~~k~~~~lG~~p~~---~~~~~l~~~~~ 304 (312)
T 3ko8_A 280 VTKLMKLTGWRPTM---TSAEAVKKTAE 304 (312)
T ss_dssp CHHHHHHHCCCCSS---CHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCC---CHHHHHHHHHH
Confidence 88888899999965 44444444443
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-34 Score=275.21 Aligned_cols=256 Identities=17% Similarity=0.100 Sum_probs=195.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHh--CCCeEEEEecCCCCcC------CCCchhHhhhccCCcEEEEcCCCCHHHHH
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVS--RGFNVIAIAREKSGIR------GRNDKEETLNQLQGASVCFSDVTNLESLE 152 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~--~g~~V~~l~r~~~~~~------~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~ 152 (405)
+++++|+|||||||||||++|+++|++ +|++|++++|+..... .......... ..+++++.+|++|++.+.
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~ 84 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLI-GFKGEVIAADINNPLDLR 84 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGT-TCCSEEEECCTTCHHHHH
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhcc-ccCceEEECCCCCHHHHH
Confidence 356789999999999999999999999 9999999999765110 0000111122 236899999999999999
Q ss_pred HH-HHhhCCCccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-------------CCh
Q 043385 153 KS-LENLGTSIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-------------PLL 215 (405)
Q Consensus 153 ~~-~~~~~~~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-------------~~~ 215 (405)
++ ..+ +|+||||||... .++...+++|+.++.+++++|++.+++ |||+||.++|. |.+
T Consensus 85 ~~~~~~----~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~ 159 (362)
T 3sxp_A 85 RLEKLH----FDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPEN 159 (362)
T ss_dssp HHTTSC----CSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSS
T ss_pred HhhccC----CCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCC
Confidence 88 554 999999999654 345668899999999999999999986 99999988873 346
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----------HHHHHHHhCCCeEEecCCeeeehh-------
Q 043385 216 EFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----------GQVELVKEGKPYVMFGDGKLCAYC------- 277 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----------~~~~~~~~g~~~~~~g~g~~~~~~------- 277 (405)
.|+.+|.++|.+++.++. . ++++++||+++|||.. .++..+..+.++.+++++.+.+++
T Consensus 160 ~Y~~sK~~~E~~~~~~~~--~-~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 236 (362)
T 3sxp_A 160 VYGFSKLCMDEFVLSHSN--D-NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI 236 (362)
T ss_dssp HHHHHHHHHHHHHHHTTT--T-SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHH
T ss_pred hhHHHHHHHHHHHHHHhc--c-CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHH
Confidence 799999999999999775 2 9999999999999863 245566778888877887765511
Q ss_pred -----hcccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhh
Q 043385 278 -----VLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGR 352 (405)
Q Consensus 278 -----~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (405)
+...+..+ +||++++ +.+|+.|+++.+.+.+| +.++...|.+.
T Consensus 237 ~ai~~~~~~~~~g-~~~i~~~-~~~s~~e~~~~i~~~~g-~~~~~~~~~~~----------------------------- 284 (362)
T 3sxp_A 237 QANVKAMKAQKSG-VYNVGYS-QARSYNEIVSILKEHLG-DFKVTYIKNPY----------------------------- 284 (362)
T ss_dssp HHHHHHTTCSSCE-EEEESCS-CEEEHHHHHHHHHHHHC-CCEEECCC--------------------------------
T ss_pred HHHHHHHhcCCCC-EEEeCCC-CCccHHHHHHHHHHHcC-CCceEECCCCC-----------------------------
Confidence 12233445 9999986 89999999999999999 77776666431
Q ss_pred hhhhhhhcccCccccccccccCCccc
Q 043385 353 YYAAESMLILDPETGEYSAEKTPSYG 378 (405)
Q Consensus 353 ~~~~~~~~~~d~~~~~~~lg~~P~~~ 378 (405)
........+|.++++..|||+|.+.
T Consensus 285 -~~~~~~~~~d~~k~~~~lG~~p~~~ 309 (362)
T 3sxp_A 285 -AFFQKHTQAHIEPTILDLDYTPLYD 309 (362)
T ss_dssp -----CCCCBCCHHHHHHHCCCCCCC
T ss_pred -cCcccceecCHHHHHHHhCCCCCCC
Confidence 0001223468888888999999654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=274.00 Aligned_cols=267 Identities=18% Similarity=0.138 Sum_probs=202.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh------ccCCcEEEEcCCCCHHHHHHHHH
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN------QLQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~------~~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
+++|+|||||||||||++|+++|+++|++|++++|+..... .....+. ...+++++.+|++|.+++.++++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 101 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQ---RNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA 101 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCH---HHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccch---hhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc
Confidence 45689999999999999999999999999999999765321 0011110 02578999999999999999999
Q ss_pred hhCCCccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhH
Q 043385 157 NLGTSIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEF 217 (405)
Q Consensus 157 ~~~~~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y 217 (405)
+ +|+|||||+... .++...+++|+.++.+++++|++.++++|||+||.++|. |.+.|
T Consensus 102 ~----~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y 177 (352)
T 1sb8_A 102 G----VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPY 177 (352)
T ss_dssp T----CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHH
T ss_pred C----CCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChh
Confidence 7 999999999753 245567899999999999999999999999999998873 35689
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----------HHHHHHHhCCCeEEecCCeeee------h----
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----------GQVELVKEGKPYVMFGDGKLCA------Y---- 276 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----------~~~~~~~~g~~~~~~g~g~~~~------~---- 276 (405)
+.+|.++|.+++.++. ..+++++++||+++|||.. .++..+..+.++.+++++.+.+ +
T Consensus 178 ~~sK~~~e~~~~~~~~-~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 256 (352)
T 1sb8_A 178 AVTKYVNELYADVFSR-CYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQA 256 (352)
T ss_dssp HHHHHHHHHHHHHHHH-HHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHH
Confidence 9999999999998876 3689999999999999852 2456667788888888877654 1
Q ss_pred ---hhcc-cccccceEeccCCCCCCCHHHHHHHHHHHc---CCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhh
Q 043385 277 ---CVLS-EDKINQILPIGGPGKALTPLEQGEILFRLL---GKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGK 349 (405)
Q Consensus 277 ---~~~~-~~~~~~~y~i~~~g~~~t~~ela~~l~~~~---g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (405)
++.. +...+++||++++ +.+|+.|+++.+.+.+ |.+....+. + .+. ..+.
T Consensus 257 ~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~g~~~~~~~~--~---------------~~~-----~~~~ 313 (352)
T 1sb8_A 257 NLLAATAGLDARNQVYNIAVG-GRTSLNQLFFALRDGLAENGVSYHREPV--Y---------------RDF-----REGD 313 (352)
T ss_dssp HHHHHTCCGGGCSEEEEESCS-CCEEHHHHHHHHHHHHHHTTCCCCCCCE--E---------------ECC-----CTTC
T ss_pred HHHHHhccccCCCceEEeCCC-CCccHHHHHHHHHHHHHhcCCCCCCCce--e---------------cCC-----Cccc
Confidence 1122 2356889999985 8999999999999999 987553211 0 000 0000
Q ss_pred hhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHh
Q 043385 350 IGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVL 390 (405)
Q Consensus 350 ~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~ 390 (405)
.....+|.++++..+||+|.+ ++++.+++.+
T Consensus 314 -------~~~~~~d~~k~~~~lG~~p~~---~~~e~l~~~~ 344 (352)
T 1sb8_A 314 -------VRHSLADISKAAKLLGYAPKY---DVSAGVALAM 344 (352)
T ss_dssp -------CSBCCBCCHHHHHHTCCCCCC---CHHHHHHHHH
T ss_pred -------hhhccCCHHHHHHHhCCCCCC---CHHHHHHHHH
Confidence 012336888888899999955 3444444444
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=273.57 Aligned_cols=275 Identities=16% Similarity=0.187 Sum_probs=204.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
||+|||||||||||++|+++|+++|++|++++|...... ......+....+++++.+|++|++++.+++++ .++|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~d~ 76 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA--TDNLHWLSSLGNFEFVHGDIRNKNDVTRLITK--YMPDS 76 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH--HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH--HCCSE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCc--hhhhhhhccCCceEEEEcCCCCHHHHHHHHhc--cCCCE
Confidence 368999999999999999999999999999998642210 00111222224689999999999999999986 25899
Q ss_pred EEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEccccccC--------------------------
Q 043385 165 VVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAICVQK-------------------------- 212 (405)
Q Consensus 165 Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~~~~~-------------------------- 212 (405)
|||||+... .++...+++|+.++.+++++|++.+++ +|||+||.++|.
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~ 156 (347)
T 1orr_A 77 CFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES 156 (347)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred EEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCcccc
Confidence 999999753 245568899999999999999999886 999999988763
Q ss_pred ----CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch----------HHHHHHHhCC-----CeEEecCCee
Q 043385 213 ----PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG----------GQVELVKEGK-----PYVMFGDGKL 273 (405)
Q Consensus 213 ----~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------~~~~~~~~g~-----~~~~~g~g~~ 273 (405)
|.+.|+.+|.++|.+++.++. +.|++++++||+++|||.. .++..+..+. ++..+|+|.+
T Consensus 157 ~~~~~~~~Y~~sK~~~E~~~~~~~~-~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~ 235 (347)
T 1orr_A 157 TQLDFHSPYGCSKGAADQYMLDYAR-IFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQ 235 (347)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCC
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHH-HhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcc
Confidence 456799999999999999876 3599999999999999852 2334444454 6777888876
Q ss_pred ee-------------hhhcc-cccccceEeccCCCC--CCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhh
Q 043385 274 CA-------------YCVLS-EDKINQILPIGGPGK--ALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKI 337 (405)
Q Consensus 274 ~~-------------~~~~~-~~~~~~~y~i~~~g~--~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~ 337 (405)
.+ .++.. +...+++||+++. + .+|+.|+++.+.+.+|.+.++...|..
T Consensus 236 ~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~-~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------- 299 (347)
T 1orr_A 236 VRDVLHAEDMISLYFTALANVSKIRGNAFNIGGT-IVNSLSLLELFKLLEDYCNIDMRFTNLPVR--------------- 299 (347)
T ss_dssp EEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSC-GGGEEEHHHHHHHHHHHHTCCCCEEEECCC---------------
T ss_pred eEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCC-CCCCccHHHHHHHHHHHhCCCCCceeCCCC---------------
Confidence 55 11122 2345789999984 5 499999999999999998777666521
Q ss_pred ccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhhccchhhcc
Q 043385 338 FPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLREGMAGQEL 399 (405)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~~~~~~~~~ 399 (405)
+ + ......+|.++++..|||+|.+ ++++.+++.++.....++.
T Consensus 300 -~--------~-------~~~~~~~d~~k~~~~lG~~p~~---~~~e~l~~~~~~~~~~~~~ 342 (347)
T 1orr_A 300 -E--------S-------DQRVFVADIKKITNAIDWSPKV---SAKDGVQKMYDWTSSILEH 342 (347)
T ss_dssp -S--------S-------CCSEECBCCHHHHHHHCCCCCS---CHHHHHHHHHHHHHHC---
T ss_pred -C--------C-------CcceeecCHHHHHHHHCCCccC---CHHHHHHHHHHHHHHHHHh
Confidence 0 0 0012346888888899999944 5677777766655444443
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-34 Score=268.50 Aligned_cols=220 Identities=22% Similarity=0.273 Sum_probs=174.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
||+|||||||||||++|+++|+++| .|+++++...... ... ..+++++.+|++| +++.+++++ +|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~------~~~--~~~~~~~~~Dl~~-~~~~~~~~~----~d~ 66 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNE------EFV--NEAARLVKADLAA-DDIKDYLKG----AEE 66 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCG------GGS--CTTEEEECCCTTT-SCCHHHHTT----CSE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCCh------hhc--CCCcEEEECcCCh-HHHHHHhcC----CCE
Confidence 3689999999999999999999999 5555555433221 111 2478999999999 889999987 999
Q ss_pred EEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHH
Q 043385 165 VVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFE 225 (405)
Q Consensus 165 Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E 225 (405)
|||+|+... .++...+++|+.++.+++++|++.++++|||+||.++|. |.+.|+.+|.++|
T Consensus 67 vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e 146 (313)
T 3ehe_A 67 VWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACE 146 (313)
T ss_dssp EEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred EEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 999998642 244568899999999999999999999999999998872 4567999999999
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCch------HHHHHHHhC-CCeEEecCCeeeehh------------hcccccccc
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSLG------GQVELVKEG-KPYVMFGDGKLCAYC------------VLSEDKINQ 286 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~~------~~~~~~~~g-~~~~~~g~g~~~~~~------------~~~~~~~~~ 286 (405)
.+++.++. ..|++++++||+++|||.. .++..+..+ .++.+++++.+.+++ +..+...++
T Consensus 147 ~~~~~~~~-~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~ 225 (313)
T 3ehe_A 147 ALIESYCH-TFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVN 225 (313)
T ss_dssp HHHHHHHH-HTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEE
T ss_pred HHHHHHHH-hcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCc
Confidence 99999886 5799999999999999853 345555555 566788988776611 122445678
Q ss_pred eEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecC
Q 043385 287 ILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVP 320 (405)
Q Consensus 287 ~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p 320 (405)
+||++++ +.+|+.|+++.+.+.+|.++.+...+
T Consensus 226 ~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~ 258 (313)
T 3ehe_A 226 IFNIGSE-DQIKVKRIAEIVCEELGLSPRFRFTG 258 (313)
T ss_dssp EEECCCS-CCEEHHHHHHHHHHHTTCCCEEEEC-
T ss_pred eEEECCC-CCeeHHHHHHHHHHHhCCCCceEECC
Confidence 9999986 89999999999999999887665444
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=267.94 Aligned_cols=261 Identities=13% Similarity=0.149 Sum_probs=201.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.+.|+|||||||||||++|+++|+++|++|++++|++.. . . . +++++.+|++|++++.+++++ .++
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~------~----l-~~~~~~~Dl~d~~~~~~~~~~--~~~ 75 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K------L----P-NVEMISLDIMDSQRVKKVISD--IKP 75 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C------C----T-TEEEEECCTTCHHHHHHHHHH--HCC
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c------c----c-eeeEEECCCCCHHHHHHHHHh--cCC
Confidence 345899999999999999999999999999999998754 1 1 1 688999999999999999986 358
Q ss_pred cEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEccccccC----------------CChhHHHH
Q 043385 163 DVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQK----------------PLLEFQRA 220 (405)
Q Consensus 163 d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~~----------------~~~~y~~s 220 (405)
|+||||||... .++...+++|+.++.+++++|++. ++++|||+||.++|. |.+.|+.+
T Consensus 76 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~s 155 (321)
T 2pk3_A 76 DYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVS 155 (321)
T ss_dssp SEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHH
T ss_pred CEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHH
Confidence 99999999753 245668899999999999999876 689999999998773 34689999
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHh---C--CCeEEecCCeeee------hh-----
Q 043385 221 KLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKE---G--KPYVMFGDGKLCA------YC----- 277 (405)
Q Consensus 221 K~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~---g--~~~~~~g~g~~~~------~~----- 277 (405)
|.++|.+++.++. +.|++++++||+++|||.. .++..+.. | .++..++++...+ ++
T Consensus 156 K~~~E~~~~~~~~-~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~ 234 (321)
T 2pk3_A 156 KASVGMLARQYVK-AYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYW 234 (321)
T ss_dssp HHHHHHHHHHHHH-HHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHH
Confidence 9999999998876 3699999999999999863 23444444 6 5777788776544 11
Q ss_pred -hcccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhh
Q 043385 278 -VLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAA 356 (405)
Q Consensus 278 -~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (405)
+......+++||++++ +.+++.|+++.+.+.+|.+.++...|.. .. .. .
T Consensus 235 ~~~~~~~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p~~---------------~~-------~~-------~ 284 (321)
T 2pk3_A 235 LLSQYGKTGDVYNVCSG-IGTRIQDVLDLLLAMANVKIDTELNPLQ---------------LR-------PS-------E 284 (321)
T ss_dssp HHHHHCCTTCEEEESCS-CEEEHHHHHHHHHHHSSSCCEEEECGGG---------------CC-------SS-------C
T ss_pred HHHhCCCCCCeEEeCCC-CCeeHHHHHHHHHHHhCCCCceeecccc---------------CC-------Cc-------c
Confidence 1122345789999985 8999999999999999988777665531 00 00 0
Q ss_pred hhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 357 ESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 357 ~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
.....+|.++++..|||+|.+ ++++.+++.++
T Consensus 285 ~~~~~~d~~k~~~~lG~~p~~---~~~e~l~~~~~ 316 (321)
T 2pk3_A 285 VPTLIGSNKRLKDSTGWKPRI---PLEKSLFEILQ 316 (321)
T ss_dssp CSBCCBCCHHHHHHHCCCCCS---CHHHHHHHHHH
T ss_pred cchhccCHHHHHHHcCCCcCC---CHHHHHHHHHH
Confidence 122346888888899999954 56666666554
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-34 Score=271.79 Aligned_cols=222 Identities=19% Similarity=0.300 Sum_probs=177.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH-HHHHHHHHhhCCCcc
Q 043385 86 INILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL-ESLEKSLENLGTSID 163 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~~~~~~~~~d 163 (405)
|+|||||||||||++++++|+++ |++|++++|+..+.. .+....+++++.+|++|. +.+.+++++ +|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~~----~d 69 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS-------RFLNHPHFHFVEGDISIHSEWIEYHVKK----CD 69 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGG-------GGTTCTTEEEEECCTTTCSHHHHHHHHH----CS
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHH-------HhhcCCCeEEEeccccCcHHHHHhhccC----CC
Confidence 58999999999999999999998 899999999876432 122235789999999984 678889998 99
Q ss_pred EEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------------CChhH
Q 043385 164 VVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------------PLLEF 217 (405)
Q Consensus 164 ~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------------~~~~y 217 (405)
+|||||+... .++...+++|+.++.+++++|++.+ ++|||+||.++|. |.+.|
T Consensus 70 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y 148 (345)
T 2bll_A 70 VVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIY 148 (345)
T ss_dssp EEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHH
T ss_pred EEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCccccc
Confidence 9999999654 2445678899999999999999998 8999999988872 12379
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch---------------HHHHHHHhCCCeEEecCCeeee-------
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG---------------GQVELVKEGKPYVMFGDGKLCA------- 275 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~---------------~~~~~~~~g~~~~~~g~g~~~~------- 275 (405)
+.+|..+|++++.++. ..+++++++||+.+|||.. .++..+..+.++.+++++.+.+
T Consensus 149 ~~sK~~~e~~~~~~~~-~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D 227 (345)
T 2bll_A 149 SVSKQLLDRVIWAYGE-KEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 227 (345)
T ss_dssp HHHHHHHHHHHHHHHH-HHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHH
T ss_pred HHHHHHHHHHHHHHHH-hcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHH
Confidence 9999999999998875 4699999999999999852 2445567788888888776554
Q ss_pred ------hhhcccc--cccceEeccCCCC-CCCHHHHHHHHHHHcCCCCCeeecCh
Q 043385 276 ------YCVLSED--KINQILPIGGPGK-ALTPLEQGEILFRLLGKEPKFLKVPI 321 (405)
Q Consensus 276 ------~~~~~~~--~~~~~y~i~~~g~-~~t~~ela~~l~~~~g~~~~~~~~p~ 321 (405)
.++..+. ..+++||++++ + .+|+.|+++.+.+.+|.+.....+|.
T Consensus 228 va~a~~~~~~~~~~~~~g~~~~i~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 281 (345)
T 2bll_A 228 GIEALYRIIENAGNRCDGEIINIGNP-ENEASIEELGEMLLASFEKHPLRHHFPP 281 (345)
T ss_dssp HHHHHHHHHHCGGGTTTTEEEEECCT-TSEEEHHHHHHHHHHHHHTCTTGGGSCC
T ss_pred HHHHHHHHHhhccccCCCceEEeCCC-CCCCCHHHHHHHHHHHhCCCcccccCcc
Confidence 1122222 45789999985 5 79999999999999998765555543
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=265.59 Aligned_cols=262 Identities=18% Similarity=0.251 Sum_probs=196.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
||+|||||||||||++++++|+++|++|++++|...... ..+. .+++++.+|++|++.+.++++. .++|+
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~--~~~~~~~~D~~~~~~~~~~~~~--~~~d~ 70 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE------DAIT--EGAKFYNGDLRDKAFLRDVFTQ--ENIEA 70 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG------GGSC--TTSEEEECCTTCHHHHHHHHHH--SCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch------hhcC--CCcEEEECCCCCHHHHHHHHhh--cCCCE
Confidence 378999999999999999999999999999999765431 1111 2789999999999999999983 23999
Q ss_pred EEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHH
Q 043385 165 VVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFE 225 (405)
Q Consensus 165 Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E 225 (405)
|||+|+... .++...+++|+.++.+++++|++.++++|||+||.++|. |.+.|+.+|.++|
T Consensus 71 vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e 150 (330)
T 2c20_A 71 VMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIE 150 (330)
T ss_dssp EEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHH
T ss_pred EEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHH
Confidence 999999753 245567899999999999999999999999999998873 3578999999999
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCc------------hHHHHHH---Hh--CCCeEEec------CCeeee------h
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSL------------GGQVELV---KE--GKPYVMFG------DGKLCA------Y 276 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~------------~~~~~~~---~~--g~~~~~~g------~g~~~~------~ 276 (405)
++++.++. +.+++++++||+++|||. ..++..+ .. +.++.++| +|.+.+ +
T Consensus 151 ~~~~~~~~-~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~D 229 (330)
T 2c20_A 151 KMLHWYSQ-ASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVED 229 (330)
T ss_dssp HHHHHHHH-TSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHH
T ss_pred HHHHHHHH-HhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHH
Confidence 99999876 469999999999999984 1233222 22 33566666 555444 1
Q ss_pred h-------hcccc--cccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhh
Q 043385 277 C-------VLSED--KINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEF 347 (405)
Q Consensus 277 ~-------~~~~~--~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (405)
+ +..+. ..+++||++++ +.+|+.|+++.+.+.+|.+.++...|...
T Consensus 230 va~a~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~------------------------ 284 (330)
T 2c20_A 230 LVAAHFLGLKDLQNGGESDFYNLGNG-NGFSVKEIVDAVREVTNHEIPAEVAPRRA------------------------ 284 (330)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCCT-TCBCHHHHHHHHHHHTTSCCCEEEECCCS------------------------
T ss_pred HHHHHHHHHhccccCCCCCeEEeCCC-CCccHHHHHHHHHHHhCCCCceeeCCCCC------------------------
Confidence 1 12221 13689999985 89999999999999999887766554210
Q ss_pred hhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 348 GKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 348 ~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
+. .....+|.++++..|||+|.+ .++++.+++.++
T Consensus 285 ~~-------~~~~~~d~~k~~~~lG~~p~~--~~l~~~l~~~~~ 319 (330)
T 2c20_A 285 GD-------PARLVASSQKAKEKLGWDPRY--VNVKTIIEHAWN 319 (330)
T ss_dssp SC-------CSEECBCCHHHHHHHCCCCSC--CCHHHHHHHHHH
T ss_pred Cc-------ccccccCHHHHHHHhCCCCcc--CCHHHHHHHHHH
Confidence 00 012336788888899999954 145555555443
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=263.38 Aligned_cols=266 Identities=18% Similarity=0.219 Sum_probs=198.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 86 INILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
|+|||||||||||++++++|+++ |++|++++|++.+. ..+.. .+++++.+|++|++++.+++++ +|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------~~l~~-~~~~~~~~D~~d~~~l~~~~~~----~d 68 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKA-------STLAD-QGVEVRHGDYNQPESLQKAFAG----VS 68 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTT-------HHHHH-TTCEEEECCTTCHHHHHHHTTT----CS
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHH-------hHHhh-cCCeEEEeccCCHHHHHHHHhc----CC
Confidence 57999999999999999999999 99999999987653 22222 4789999999999999999998 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhhhcCCceEEEE
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIV 243 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~il 243 (405)
+|||+|+... . .++|+.++.+++++|++.+++||||+||.+++....+|+.+|..+|++++. .+++++++
T Consensus 69 ~vi~~a~~~~---~--~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~~K~~~E~~~~~-----~~~~~~il 138 (287)
T 2jl1_A 69 KLLFISGPHY---D--NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEESIIPLAHVHLATEYAIRT-----TNIPYTFL 138 (287)
T ss_dssp EEEECCCCCS---C--HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCCSTHHHHHHHHHHHHHH-----TTCCEEEE
T ss_pred EEEEcCCCCc---C--chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCCCchHHHHHHHHHHHHH-----cCCCeEEE
Confidence 9999998632 1 157999999999999999999999999999986667899999999999876 79999999
Q ss_pred ecCCcccCc-hHHHHH-HHhCCCeEEecCCeeee-------------hhhcccccccceEeccCCCCCCCHHHHHHHHHH
Q 043385 244 RPTAFFKSL-GGQVEL-VKEGKPYVMFGDGKLCA-------------YCVLSEDKINQILPIGGPGKALTPLEQGEILFR 308 (405)
Q Consensus 244 Rp~~v~g~~-~~~~~~-~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~ 308 (405)
||+.++|+. ..++.. +..+... .+.++..+ .++..+...+++||++++ +.+|+.|+++.+.+
T Consensus 139 rp~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~s~~e~~~~i~~ 215 (287)
T 2jl1_A 139 RNALYTDFFVNEGLRASTESGAIV--TNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSN-QPWTFDELAQILSE 215 (287)
T ss_dssp EECCBHHHHSSGGGHHHHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCS-SCBCHHHHHHHHHH
T ss_pred ECCEeccccchhhHHHHhhCCcee--ccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCC-CcCCHHHHHHHHHH
Confidence 999999876 444433 3344332 33333322 222333456789999986 79999999999999
Q ss_pred HcCCCCCeeecChHHHHHHHH---HHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHH
Q 043385 309 LLGKEPKFLKVPIGIMDFAIG---VLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEF 385 (405)
Q Consensus 309 ~~g~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~ 385 (405)
.+|.+.++.++|.+.+..... .++..... ...+...+ .......|.++++..+| .| .+++|+
T Consensus 216 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~lG-~~----~~l~e~ 280 (287)
T 2jl1_A 216 VSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEI---------TAAIYDAI-SKGEASKTSDDLQKLIG-SL----TPLKET 280 (287)
T ss_dssp HHSSCCEEEECCHHHHHHHHHHTTCCHHHHHH---------HHHHHHHH-HTTTTCCCCSHHHHHHS-SC----CCHHHH
T ss_pred HHCCcceEEeCCHHHHHHHHHhCCCCHHHHHH---------HHHHHHHH-hCCCCcCCchHHHHHhC-CC----CCHHHH
Confidence 999999888999876553321 01111000 00011111 11233457778888899 44 789999
Q ss_pred HHHHhh
Q 043385 386 FERVLR 391 (405)
Q Consensus 386 ~~~~~~ 391 (405)
+++.++
T Consensus 281 l~~~~~ 286 (287)
T 2jl1_A 281 VKQALK 286 (287)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 998764
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-33 Score=265.43 Aligned_cols=259 Identities=21% Similarity=0.286 Sum_probs=198.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||+||||++++++|+++|++|++++|...... ..+. .+++++.+|++|++++.+++++ .++|+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~------~~~~--~~~~~~~~Dl~~~~~~~~~~~~--~~~d~v 70 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR------ENVP--KGVPFFRVDLRDKEGVERAFRE--FRPTHV 70 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG------GGSC--TTCCEECCCTTCHHHHHHHHHH--HCCSEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch------hhcc--cCeEEEECCCCCHHHHHHHHHh--cCCCEE
Confidence 58999999999999999999999999999998543221 1111 3678899999999999999983 139999
Q ss_pred EEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc-cccC---------------CChhHHHHHHHH
Q 043385 166 VSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI-CVQK---------------PLLEFQRAKLKF 224 (405)
Q Consensus 166 v~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~-~~~~---------------~~~~y~~sK~~~ 224 (405)
||+|+... .++...+++|+.++.+++++|++.++++||++||. ++|. |.+.|+.+|.++
T Consensus 71 i~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 150 (311)
T 2p5y_A 71 SHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAF 150 (311)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHH
T ss_pred EECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHH
Confidence 99998653 24556789999999999999999999999999998 5442 456899999999
Q ss_pred HHHHHHHhhhcCCceEEEEecCCcccCch----------HHHHHHHhCCCeEEe-----cCCeeeehhhccc--------
Q 043385 225 EAEMMKVAEEDSGFTYSIVRPTAFFKSLG----------GQVELVKEGKPYVMF-----GDGKLCAYCVLSE-------- 281 (405)
Q Consensus 225 E~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------~~~~~~~~g~~~~~~-----g~g~~~~~~~~~~-------- 281 (405)
|.+++.++. +.+++++++||+++|||.. .++..+..+.++.++ +++.+.+++++.+
T Consensus 151 e~~~~~~~~-~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 229 (311)
T 2p5y_A 151 EHYLSVYGQ-SYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHAL 229 (311)
T ss_dssp HHHHHHHHH-HHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHH-HcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHH
Confidence 999998876 4689999999999999852 234556678887777 7776654111100
Q ss_pred --ccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhh
Q 043385 282 --DKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESM 359 (405)
Q Consensus 282 --~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (405)
...+++||++++ +.+|+.|+++.+.+.+|.+.++...|... +.. ..
T Consensus 230 ~~~~~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~------------------------~~~-------~~ 277 (311)
T 2p5y_A 230 ALFSLEGIYNVGTG-EGHTTREVLMAVAEAAGKAPEVQPAPPRP------------------------GDL-------ER 277 (311)
T ss_dssp HHHHCCEEEEESCS-CCEEHHHHHHHHHHHHTCCCCEEEECCCT------------------------TCC-------SB
T ss_pred HHhCCCCEEEeCCC-CCccHHHHHHHHHHHhCCCCCceeCCCCc------------------------cch-------hh
Confidence 012789999985 89999999999999999887776555320 000 12
Q ss_pred cccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 360 LILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 360 ~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
..+|.++++. +||+|.+ ++++.+++.++
T Consensus 278 ~~~d~~k~~~-lg~~p~~---~~~~~l~~~~~ 305 (311)
T 2p5y_A 278 SVLSPLKLMA-HGWRPKV---GFQEGIRLTVD 305 (311)
T ss_dssp CCBCCHHHHT-TTCCCSS---CHHHHHHHHHH
T ss_pred ccCCHHHHHH-CCCCCCC---CHHHHHHHHHH
Confidence 3468888888 9999954 55555555544
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=265.61 Aligned_cols=224 Identities=21% Similarity=0.242 Sum_probs=175.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++|+|||||||||||++++++|+++| ++|++++|...... ......+....+++++.+|++|++.+.+++.+
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---- 75 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSN--PANLKDLEDDPRYTFVKGDVADYELVKELVRK---- 75 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHT----
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCc--hhHHhhhccCCceEEEEcCCCCHHHHHHHhhC----
Confidence 35789999999999999999999996 89999999753211 00111111134789999999999999999977
Q ss_pred ccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCC-CEEEEEccccccC--------------CChhHHHHH
Q 043385 162 IDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGA-SHFVLLSAICVQK--------------PLLEFQRAK 221 (405)
Q Consensus 162 ~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v-~~~V~~Ss~~~~~--------------~~~~y~~sK 221 (405)
+|+||||||... .++...+++|+.++.+++++|.+.+. ++|||+||.++|. |.+.|+.+|
T Consensus 76 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK 155 (336)
T 2hun_A 76 VDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATK 155 (336)
T ss_dssp CSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHH
T ss_pred CCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHH
Confidence 999999999753 24566889999999999999998875 7999999987762 346899999
Q ss_pred HHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeee------hh------hcccc
Q 043385 222 LKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCA------YC------VLSED 282 (405)
Q Consensus 222 ~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~------~~------~~~~~ 282 (405)
.++|.+++.++. +.+++++++||+.+|||.. .++..+..+.++.+++++.+.+ ++ +....
T Consensus 156 ~~~e~~~~~~~~-~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~ 234 (336)
T 2hun_A 156 AASDMLVLGWTR-TYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG 234 (336)
T ss_dssp HHHHHHHHHHHH-HTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-HhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC
Confidence 999999998876 4699999999999999863 2445667788888888876554 11 11233
Q ss_pred cccceEeccCCCCCCCHHHHHHHHHHHcCCCCC
Q 043385 283 KINQILPIGGPGKALTPLEQGEILFRLLGKEPK 315 (405)
Q Consensus 283 ~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~ 315 (405)
..+++||++++ +.+|+.|+++.+.+.+|.+.+
T Consensus 235 ~~g~~~~v~~~-~~~s~~e~~~~i~~~~g~~~~ 266 (336)
T 2hun_A 235 ESREIYNISAG-EEKTNLEVVKIILRLMGKGEE 266 (336)
T ss_dssp CTTCEEEECCS-CEECHHHHHHHHHHHTTCCST
T ss_pred CCCCEEEeCCC-CcccHHHHHHHHHHHhCCCcc
Confidence 46789999985 889999999999999998643
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-33 Score=266.44 Aligned_cols=270 Identities=17% Similarity=0.232 Sum_probs=198.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC---CCchhHhhh--ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG---RNDKEETLN--QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~---~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+|+|||||||||||++++++|+++|++|++++|....... .......+. ...+++++.+|++|++++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-- 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK-- 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh--
Confidence 5799999999999999999999999999999987543100 011111121 124789999999999999999983
Q ss_pred CCccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------C-ChhHHH
Q 043385 160 TSIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------P-LLEFQR 219 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~-~~~y~~ 219 (405)
.++|+|||||+... .++.+.+++|+.++.+++++|++.++++|||+||.++|. | .+.|+.
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~ 159 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGK 159 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHH
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHH
Confidence 13999999999753 245568899999999999999999999999999998873 3 578999
Q ss_pred HHHHHHHHHHHHhhhcCCceEEEEecCCcccCc-------------hHH----HHHHH-hCCCeEEec------CCeeee
Q 043385 220 AKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL-------------GGQ----VELVK-EGKPYVMFG------DGKLCA 275 (405)
Q Consensus 220 sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~-------------~~~----~~~~~-~g~~~~~~g------~g~~~~ 275 (405)
+|.++|.+++.++.+..+++++++||+++|||. ..+ +..+. .+.++.++| +|.+.+
T Consensus 160 sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 239 (348)
T 1ek6_A 160 SKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR 239 (348)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEE
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEE
Confidence 999999999998863234999999999999983 122 23333 466677776 455444
Q ss_pred ------h-------hhcccc-ccc-ceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccc
Q 043385 276 ------Y-------CVLSED-KIN-QILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPS 340 (405)
Q Consensus 276 ------~-------~~~~~~-~~~-~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 340 (405)
+ ++..+. ..+ ++||++++ +.+|+.|+++.+.+.+|.+.++...|...
T Consensus 240 ~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------------- 301 (348)
T 1ek6_A 240 DYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTG-TGYSVLQMVQAMEKASGKKIPYKVVARRE----------------- 301 (348)
T ss_dssp CEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCS-CCEEHHHHHHHHHHHHCSCCCEEEECCCT-----------------
T ss_pred eeEEHHHHHHHHHHHHhcccccCCceEEEeCCC-CCccHHHHHHHHHHHhCCCCceeeCCCCC-----------------
Confidence 1 122221 344 89999985 89999999999999999887766554210
Q ss_pred hhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 341 LEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
+. .....+|.++++..|||+|.+. +++.+++.++
T Consensus 302 -------~~-------~~~~~~d~~k~~~~lG~~p~~~---l~~~l~~~~~ 335 (348)
T 1ek6_A 302 -------GD-------VAACYANPSLAQEELGWTAALG---LDRMCEDLWR 335 (348)
T ss_dssp -------TC-------CSEECBCCHHHHHTTCCCCCCC---HHHHHHHHHH
T ss_pred -------cc-------chhhccCHHHHHHhcCCCCCCC---HHHHHHHHHH
Confidence 00 0123468888888999999654 4444444443
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-33 Score=266.61 Aligned_cols=221 Identities=20% Similarity=0.260 Sum_probs=177.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC---C---CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 86 INILVVGSTGYIGKFVVEELVSR---G---FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~---g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
|+|||||||||||++++++|+++ | ++|++++|...... ......+....+++++.+|++|++++.+++.+
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 76 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLARELRG-- 76 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHHTTT--
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCc--hhhhhhcccCCCeEEEEcCCCCHHHHHHHhcC--
Confidence 58999999999999999999997 8 99999999753211 01111122224789999999999999999976
Q ss_pred CCccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHH
Q 043385 160 TSIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRA 220 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~s 220 (405)
+|+|||||+... .++...+++|+.++.+++++|++.++++|||+||.++|. |.+.|+.+
T Consensus 77 --~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~s 154 (337)
T 1r6d_A 77 --VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAAS 154 (337)
T ss_dssp --CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHH
T ss_pred --CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHH
Confidence 999999999754 255678899999999999999999999999999987762 45689999
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeee------hh------hccc
Q 043385 221 KLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCA------YC------VLSE 281 (405)
Q Consensus 221 K~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~------~~------~~~~ 281 (405)
|.++|++++.++. ..+++++++||+++|||.. .++..+..+.++.+++++.+.+ ++ +...
T Consensus 155 K~~~e~~~~~~~~-~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 233 (337)
T 1r6d_A 155 KAGSDLVARAYHR-TYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG 233 (337)
T ss_dssp HHHHHHHHHHHHH-HHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhC
Confidence 9999999998876 4689999999999999853 2455667788888888877654 11 1122
Q ss_pred ccccceEeccCCCCCCCHHHHHHHHHHHcCCCC
Q 043385 282 DKINQILPIGGPGKALTPLEQGEILFRLLGKEP 314 (405)
Q Consensus 282 ~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~ 314 (405)
...+++||++++ +.+|+.|+++.+.+.+|.+.
T Consensus 234 ~~~g~~~~v~~~-~~~s~~e~~~~i~~~~g~~~ 265 (337)
T 1r6d_A 234 GRAGEIYHIGGG-LELTNRELTGILLDSLGADW 265 (337)
T ss_dssp CCTTCEEEECCC-CEEEHHHHHHHHHHHHTCCG
T ss_pred CCCCCEEEeCCC-CCccHHHHHHHHHHHhCCCc
Confidence 346789999986 88999999999999999864
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-33 Score=275.10 Aligned_cols=253 Identities=12% Similarity=0.081 Sum_probs=195.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+++|+|||||||||||++|+++|+++| ++|++++|+..... ..+...++++++.+|++|++.+.+++++
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~------~~l~~~~~v~~~~~Dl~d~~~l~~~~~~---- 99 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK------INVPDHPAVRFSETSITDDALLASLQDE---- 99 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG------GGSCCCTTEEEECSCTTCHHHHHHCCSC----
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch------hhccCCCceEEEECCCCCHHHHHHHhhC----
Confidence 457899999999999999999999999 99999999865431 1111135789999999999999998887
Q ss_pred ccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccccc--------------------CCCh
Q 043385 162 IDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQ--------------------KPLL 215 (405)
Q Consensus 162 ~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~--------------------~~~~ 215 (405)
+|+|||||+.... ++...+++|+.++.+++++|++. ++++|||+||.++| .|.+
T Consensus 100 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~ 179 (377)
T 2q1s_A 100 YDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDS 179 (377)
T ss_dssp CSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCS
T ss_pred CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCC
Confidence 9999999997542 45568899999999999999999 89999999998765 2346
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch----------------H----HHHHHHhCCCeEEecCCeeee
Q 043385 216 EFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG----------------G----QVELVKEGKPYVMFGDGKLCA 275 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------------~----~~~~~~~g~~~~~~g~g~~~~ 275 (405)
.|+.+|.++|.+++.++. ..+++++++||+++|||.. . ++..+..+.++.+++++.+.+
T Consensus 180 ~Y~~sK~~~E~~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~ 258 (377)
T 2q1s_A 180 PYSMSKIFGEFYSVYYHK-QHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATR 258 (377)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEE
T ss_pred chHHHHHHHHHHHHHHHH-HhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEE
Confidence 899999999999998875 3599999999999999854 1 345566788777777776554
Q ss_pred ---------hh-h---cccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchh
Q 043385 276 ---------YC-V---LSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLE 342 (405)
Q Consensus 276 ---------~~-~---~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 342 (405)
.+ + ......+ +||++++ +.+|+.|+++.+.+.+|.+.++...|..
T Consensus 259 ~~i~v~Dva~a~i~~~~~~~~~g-~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p~~-------------------- 316 (377)
T 2q1s_A 259 DFIFVEDVANGLIACAADGTPGG-VYNIASG-KETSIADLATKINEITGNNTELDRLPKR-------------------- 316 (377)
T ss_dssp CCEEHHHHHHHHHHHHHHCCTTE-EEECCCC-CCEEHHHHHHHHHHHHTCCSCCCCCCCC--------------------
T ss_pred eeEEHHHHHHHHHHHHHhcCCCC-eEEecCC-CceeHHHHHHHHHHHhCCCCCceeCCCC--------------------
Confidence 12 1 1122245 9999986 8999999999999999987665554421
Q ss_pred hhhhhhhhhhhhhhhhhcccCccccccccccCCccc
Q 043385 343 DAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYG 378 (405)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~ 378 (405)
.+.. .....+|.++++..|||+|.+.
T Consensus 317 ----~~~~------~~~~~~d~~k~~~~lG~~p~~~ 342 (377)
T 2q1s_A 317 ----PWDN------SGKRFGSPEKARRELGFSADVS 342 (377)
T ss_dssp ----GGGC------C-CCCCCCHHHHHHHCCCCCCC
T ss_pred ----cccc------ccccccCHHHHHHHcCCCCCCC
Confidence 0000 0123468888888999999654
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-33 Score=264.70 Aligned_cols=258 Identities=14% Similarity=0.109 Sum_probs=192.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++|+|||||||||||++|+++|+++|++|++++|+.............+....+++++.+|+. + +
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~----~ 70 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------D----V 70 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------T----E
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------c----C
Confidence 4578999999999999999999999999999999987621111111111111235666666665 5 9
Q ss_pred cEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHH
Q 043385 163 DVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLK 223 (405)
Q Consensus 163 d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~ 223 (405)
|+|||+|+... ..+...++ |+.++.+++++|++.++++|||+||.++|. |.+.|+.+|..
T Consensus 71 d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~ 149 (321)
T 3vps_A 71 RLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVG 149 (321)
T ss_dssp EEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred CEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHH
Confidence 99999999753 34556777 999999999999999999999999998873 35789999999
Q ss_pred HHHHHHHHhhhcCCc-eEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeeehh------------hccccc
Q 043385 224 FEAEMMKVAEEDSGF-TYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCAYC------------VLSEDK 283 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi-~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~~~------------~~~~~~ 283 (405)
+|++++.++. ..++ +++++||+++|||.. .++..+..+.++.+++++.+.+.+ +.....
T Consensus 150 ~E~~~~~~~~-~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 228 (321)
T 3vps_A 150 LEMVAGAHQR-ASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPL 228 (321)
T ss_dssp HHHHHHHHHH-SSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCC
T ss_pred HHHHHHHHHH-HcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCC
Confidence 9999999887 5789 999999999999852 355667788888888888776511 122223
Q ss_pred ccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccC
Q 043385 284 INQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILD 363 (405)
Q Consensus 284 ~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 363 (405)
.+ +||++++ +.+|+.|+++.+. .+|.+.++...|.+. . ......+|
T Consensus 229 ~g-~~~i~~~-~~~s~~e~~~~i~-~~g~~~~~~~~~~~~------------------------~-------~~~~~~~d 274 (321)
T 3vps_A 229 PS-VVNFGSG-QSLSVNDVIRILQ-ATSPAAEVARKQPRP------------------------N-------EITEFRAD 274 (321)
T ss_dssp CS-EEEESCS-CCEEHHHHHHHHH-TTCTTCEEEEECCCT------------------------T-------CCSBCCBC
T ss_pred CC-eEEecCC-CcccHHHHHHHHH-HhCCCCccccCCCCC------------------------C-------Ccceeecc
Confidence 35 9999986 8999999999999 999988877666431 0 01123468
Q ss_pred ccccccccccCC-ccch-hhHHHHHHHHh
Q 043385 364 PETGEYSAEKTP-SYGK-DTLEEFFERVL 390 (405)
Q Consensus 364 ~~~~~~~lg~~P-~~~~-~~l~~~~~~~~ 390 (405)
.++++..|||.| .+.. +.++++++.+.
T Consensus 275 ~~k~~~~lG~~p~~~~~~~~l~~~~~~~~ 303 (321)
T 3vps_A 275 TALQTRQIGERSGGIGIEEGIRLTLEWWQ 303 (321)
T ss_dssp CHHHHHHHCCCSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcCCHHHHHHHHHHHHH
Confidence 888888999999 6654 33444444443
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=263.44 Aligned_cols=252 Identities=15% Similarity=0.132 Sum_probs=194.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++|+|||||||||||++|+++|+++|+ +.... ..+++++.+|++|++.+.+++++ .++
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~--~~~ 62 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED-------------WVFVSSKDADLTDTAQTRALFEK--VQP 62 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-------------EEECCTTTCCTTSHHHHHHHHHH--SCC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc-------------ccccCceecccCCHHHHHHHHhh--cCC
Confidence 5678999999999999999999999998 11110 12455567999999999999997 368
Q ss_pred cEEEEcccccC------CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC------------------Ch-hH
Q 043385 163 DVVVSCLASRS------GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP------------------LL-EF 217 (405)
Q Consensus 163 d~Vv~~a~~~~------~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~------------------~~-~y 217 (405)
|+|||+|+... .++.+.+++|+.++.+++++|++.+++||||+||.++|.. .. +|
T Consensus 63 d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y 142 (319)
T 4b8w_A 63 THVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGY 142 (319)
T ss_dssp SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHH
T ss_pred CEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchH
Confidence 99999999753 2445678999999999999999999999999999988721 12 59
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH-----------HHHH----HHhCCCeEEecCCeeeeh------
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG-----------QVEL----VKEGKPYVMFGDGKLCAY------ 276 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~-----------~~~~----~~~g~~~~~~g~g~~~~~------ 276 (405)
+.+|..+|++++.++. ..+++++++||+++|||... ++.. +..+.++.+++++.+.++
T Consensus 143 ~~sK~~~E~~~~~~~~-~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D 221 (319)
T 4b8w_A 143 SYAKRMIDVQNRAYFQ-QYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLD 221 (319)
T ss_dssp HHHHHHHHHHHHHHHH-HHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHH
T ss_pred HHHHHHHHHHHHHHHH-hhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHH
Confidence 9999999999998876 46999999999999998632 3444 677889988999887651
Q ss_pred -------hhcc-cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhh
Q 043385 277 -------CVLS-EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFG 348 (405)
Q Consensus 277 -------~~~~-~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (405)
++.. +...+++||++++ +.+|+.|+++.+.+.+|.+.++...|... .
T Consensus 222 va~a~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~------------------------~ 276 (319)
T 4b8w_A 222 LAQLFIWVLREYNEVEPIILSVGEE-DEVSIKEAAEAVVEAMDFHGEVTFDTTKS------------------------D 276 (319)
T ss_dssp HHHHHHHHHHHCCCSSCEEECCCGG-GCEEHHHHHHHHHHHTTCCSCEEEETTSC------------------------C
T ss_pred HHHHHHHHHhccccCCceEEEecCC-CceeHHHHHHHHHHHhCCCCcEEeCCCCC------------------------c
Confidence 1222 2344679999985 89999999999999999887766544320 0
Q ss_pred hhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 349 KIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 349 ~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
. ......|.++++..|||.|.+ ++++.+++.++
T Consensus 277 ~-------~~~~~~d~~k~~~~lg~~p~~---~~~~~l~~~~~ 309 (319)
T 4b8w_A 277 G-------QFKKTASNSKLRTYLPDFRFT---PFKQAVKETCA 309 (319)
T ss_dssp C-------CSCCCBCCHHHHHHCTTCCCC---CHHHHHHHHHH
T ss_pred C-------cccccCCHHHHHHhcCCCCCC---CHHHHHHHHHH
Confidence 0 011236888999999999954 45555554444
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=264.03 Aligned_cols=221 Identities=17% Similarity=0.219 Sum_probs=177.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+|+|||||||||||++++++|+++ |++|++++|+..... ......+.. ++++++.+|++|++.+.+++++ +
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~----~ 76 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN--KANLEAILG-DRVELVVGDIADAELVDKLAAK----A 76 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC--GGGTGGGCS-SSEEEEECCTTCHHHHHHHHTT----C
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCC--hhHHhhhcc-CCeEEEECCCCCHHHHHHHhhc----C
Confidence 479999999999999999999999 899999999753211 001111111 4789999999999999999998 8
Q ss_pred cEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-------------------------
Q 043385 163 DVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK------------------------- 212 (405)
Q Consensus 163 d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~------------------------- 212 (405)
|+|||||+... .++...+++|+.++.+++++|.+.++ +|||+||.++|.
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~ 155 (348)
T 1oc2_A 77 DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY 155 (348)
T ss_dssp SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCC
T ss_pred CEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCC
Confidence 99999999753 25567889999999999999999888 999999987662
Q ss_pred -CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeeehh-------
Q 043385 213 -PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCAYC------- 277 (405)
Q Consensus 213 -~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~~~------- 277 (405)
|.+.|+.+|..+|.+++.++. ..|++++++||+.+|||.. .++..+..+.++.+++++.+.+.+
T Consensus 156 ~~~~~Y~~sK~~~e~~~~~~~~-~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 234 (348)
T 1oc2_A 156 NPSSPYSSTKAASDLIVKAWVR-SFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHS 234 (348)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHH-HhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHH
Confidence 346799999999999998876 4599999999999999863 245566678888778887665411
Q ss_pred -----hcccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCC
Q 043385 278 -----VLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPK 315 (405)
Q Consensus 278 -----~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~ 315 (405)
+......+++||++++ +.+++.|+++.+.+.+|.+..
T Consensus 235 ~~~~~~~~~~~~g~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~ 276 (348)
T 1oc2_A 235 TGVWAILTKGRMGETYLIGAD-GEKNNKEVLELILEKMGQPKD 276 (348)
T ss_dssp HHHHHHHHHCCTTCEEEECCS-CEEEHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHhhCCCCCCeEEeCCC-CCCCHHHHHHHHHHHhCCCcc
Confidence 1123346789999985 899999999999999998653
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=259.75 Aligned_cols=265 Identities=18% Similarity=0.234 Sum_probs=194.2
Q ss_pred eEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 87 NILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|||||||||||++++++|+++ |++|++++|++++. ..+.. .+++++.+|++|++++.+++++ +|+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------~~~~~-~~~~~~~~D~~d~~~~~~~~~~----~d~ 68 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA-------QALAA-QGITVRQADYGDEAALTSALQG----VEK 68 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC-------HHHHH-TTCEEEECCTTCHHHHHHHTTT----CSE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh-------hhhhc-CCCeEEEcCCCCHHHHHHHHhC----CCE
Confidence 5899999999999999999999 99999999987653 22222 4789999999999999999998 999
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhhhcCCceEEEEe
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVR 244 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilR 244 (405)
|||+|+... +.|+.++++++++|++.+++|||++||.+++....+|+.+|..+|++++. .+++++++|
T Consensus 69 vi~~a~~~~-------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~y~~sK~~~e~~~~~-----~~~~~~ilr 136 (286)
T 2zcu_A 69 LLLISSSEV-------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLAD-----SGIVYTLLR 136 (286)
T ss_dssp EEECC---------------CHHHHHHHHHHHHTCCEEEEEEETTTTTCCSTTHHHHHHHHHHHHH-----HCSEEEEEE
T ss_pred EEEeCCCCc-------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCcchhHHHHHHHHHHHHH-----cCCCeEEEe
Confidence 999998532 25788999999999999999999999999986667899999999999876 689999999
Q ss_pred cCCcccCchHHHHHHHhCCCeEEecCCeeee-------------hhhcccccccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 245 PTAFFKSLGGQVELVKEGKPYVMFGDGKLCA-------------YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 245 p~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
|+.++++...++.....++.+. .++++..+ .++..+...+++||++++ +.+|+.|+++.+.+.+|
T Consensus 137 p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~-~~~s~~e~~~~i~~~~g 214 (286)
T 2zcu_A 137 NGWYSENYLASAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGD-SAWTLTQLAAELTKQSG 214 (286)
T ss_dssp ECCBHHHHHTTHHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCS-SCBCHHHHHHHHHHHHS
T ss_pred ChHHhhhhHHHhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCC-CcCCHHHHHHHHHHHHC
Confidence 9988887655444444334443 44444333 222333456889999986 79999999999999999
Q ss_pred CCCCeeecChHHHHHHHH---HHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHH
Q 043385 312 KEPKFLKVPIGIMDFAIG---VLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFER 388 (405)
Q Consensus 312 ~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~ 388 (405)
.+.++.++|.+.+...+. ..+...... ..+...+ .......|.++++..+||.| .+++|++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~lg~~~----~~~~e~l~~ 280 (286)
T 2zcu_A 215 KQVTYQNLSEADFAAALKSVGLPDGLADML---------ADSDVGA-SKGGLFDDSKTLSKLIGHPT----TTLAESVSH 280 (286)
T ss_dssp SCCEEEECCHHHHHHHHTTSSCCHHHHHHH---------HHHHHHH-HTTTTCCCCCHHHHHHTSCC----CCHHHHHHG
T ss_pred CCCceeeCCHHHHHHHHHHcCCCHHHHHHH---------HHHHHHH-hCCCCccCchHHHHHhCcCC----CCHHHHHHH
Confidence 999899999876553321 111111000 0001111 11223456777888899855 789999988
Q ss_pred Hhh
Q 043385 389 VLR 391 (405)
Q Consensus 389 ~~~ 391 (405)
.++
T Consensus 281 ~~~ 283 (286)
T 2zcu_A 281 LFN 283 (286)
T ss_dssp GGC
T ss_pred HHh
Confidence 764
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=264.26 Aligned_cols=246 Identities=15% Similarity=0.133 Sum_probs=190.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|+||||| +||||++|+++|+++|++|++++|++++. .++++++.+|++|++.+.+++++ ++|
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~---~~d 65 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVHL---RPE 65 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGGG---CCS
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhcC---CCC
Confidence 457999999 59999999999999999999999987653 14789999999999999988876 599
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHHHHHH
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFEAEMM 229 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E~~~~ 229 (405)
+|||+|+....++...+++|+.++.+++++|++.++++|||+||.++|. |.+.|+.+|.++|++ +
T Consensus 66 ~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~ 144 (286)
T 3gpi_A 66 ILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-L 144 (286)
T ss_dssp EEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-G
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-H
Confidence 9999999766666778899999999999999999999999999999872 467899999999998 5
Q ss_pred HHhhhcCCceEEEEecCCcccCchH-HHHHHHhCCCeEEecCCeeee-------------hhhccc--ccccceEeccCC
Q 043385 230 KVAEEDSGFTYSIVRPTAFFKSLGG-QVELVKEGKPYVMFGDGKLCA-------------YCVLSE--DKINQILPIGGP 293 (405)
Q Consensus 230 ~~~~~~~gi~~~ilRp~~v~g~~~~-~~~~~~~g~~~~~~g~g~~~~-------------~~~~~~--~~~~~~y~i~~~ 293 (405)
. . ++++++||+++|||... ++..+.. ... ++++...+ .++..+ ...+++||++++
T Consensus 145 ~-----~-~~~~ilR~~~v~G~~~~~~~~~~~~-~~~--~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~ 215 (286)
T 3gpi_A 145 A-----A-YSSTILRFSGIYGPGRLRMIRQAQT-PEQ--WPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDN 215 (286)
T ss_dssp G-----G-SSEEEEEECEEEBTTBCHHHHHTTC-GGG--SCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCS
T ss_pred h-----c-CCeEEEecccccCCCchhHHHHHHh-ccc--CCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCC
Confidence 4 4 99999999999999754 5555554 322 35555444 122222 467899999985
Q ss_pred CCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCcccccccccc
Q 043385 294 GKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEK 373 (405)
Q Consensus 294 g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~ 373 (405)
+.+|+.|+++.+.+.+|.+.++...+ . ......+|.++++ .+||
T Consensus 216 -~~~s~~e~~~~i~~~~g~~~~~~~~~-~---------------------------------~~~~~~~d~~k~~-~lG~ 259 (286)
T 3gpi_A 216 -QPLPVHDLLRWLADRQGIAYPAGATP-P---------------------------------VQGNKKLSNARLL-ASGY 259 (286)
T ss_dssp -CCEEHHHHHHHHHHHTTCCCCCSCCC-C---------------------------------BCSSCEECCHHHH-HTTC
T ss_pred -CCCCHHHHHHHHHHHcCCCCCCCCCc-c---------------------------------cCCCeEeeHHHHH-HcCC
Confidence 89999999999999999876553222 0 0112336888887 8999
Q ss_pred CCccchhhHHHHHHHHhhcc
Q 043385 374 TPSYGKDTLEEFFERVLREG 393 (405)
Q Consensus 374 ~P~~~~~~l~~~~~~~~~~~ 393 (405)
+|.+. ++++.+++..+..
T Consensus 260 ~p~~~--~l~e~l~~~~~~~ 277 (286)
T 3gpi_A 260 QLIYP--DYVSGYGALLAAM 277 (286)
T ss_dssp CCSSC--SHHHHHHHHHHHH
T ss_pred CCcCC--cHHHHHHHHHHHH
Confidence 99441 4666666666543
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-32 Score=263.95 Aligned_cols=259 Identities=18% Similarity=0.197 Sum_probs=191.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHH-hCCCeEEEEecCCCCcCC--CCchhHhh----hc------cCC---cEEEEcCCCCH
Q 043385 85 DINILVVGSTGYIGKFVVEELV-SRGFNVIAIAREKSGIRG--RNDKEETL----NQ------LQG---ASVCFSDVTNL 148 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~l~r~~~~~~~--~~~~~~~~----~~------~~~---v~~~~~Dl~d~ 148 (405)
+|+|||||||||||++|+++|+ ++|++|++++|+...... .......+ .. ..+ ++++.+|++|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4799999999999999999999 999999999997654200 00000111 00 124 89999999999
Q ss_pred HHHHHHHHhhCCCccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-----------
Q 043385 149 ESLEKSLENLGTSIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK----------- 212 (405)
Q Consensus 149 ~~l~~~~~~~~~~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~----------- 212 (405)
+.+.++++.. +++|+|||||+... .++...+++|+.++.+++++|++.++++|||+||.++|.
T Consensus 82 ~~~~~~~~~~-~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 82 DFLNGVFTRH-GPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHS-CCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHhc-CCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence 9999999842 13999999999754 245568899999999999999999999999999998873
Q ss_pred ----------CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCc------------hHHHHH--------HHhC
Q 043385 213 ----------PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL------------GGQVEL--------VKEG 262 (405)
Q Consensus 213 ----------~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~------------~~~~~~--------~~~g 262 (405)
|.+.|+.+|.++|.+++.++. +.+++++++||+++|||. ..++.. +..+
T Consensus 161 ~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 239 (397)
T 1gy8_A 161 EPIDINAKKSPESPYGESKLIAERMIRDCAE-AYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD 239 (397)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC
T ss_pred cCcCccCCCCCCCchHHHHHHHHHHHHHHHH-HHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhc
Confidence 246899999999999999876 359999999999999984 123332 2234
Q ss_pred C------------CeEEec------CCeeee------h-------hhcccccc-----c---ceEeccCCCCCCCHHHHH
Q 043385 263 K------------PYVMFG------DGKLCA------Y-------CVLSEDKI-----N---QILPIGGPGKALTPLEQG 303 (405)
Q Consensus 263 ~------------~~~~~g------~g~~~~------~-------~~~~~~~~-----~---~~y~i~~~g~~~t~~ela 303 (405)
. ++.++| +|.+.+ + ++..+... + ++||++++ +.+|+.|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~ 318 (397)
T 1gy8_A 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS-RGYSVREVI 318 (397)
T ss_dssp -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS-CCEEHHHHH
T ss_pred CccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCC-CcccHHHHH
Confidence 3 466666 565544 1 11122222 3 89999985 899999999
Q ss_pred HHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCcc
Q 043385 304 EILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSY 377 (405)
Q Consensus 304 ~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~ 377 (405)
+.+.+.+|.+.++...|.. .+. .....+|.++++..|||+|.+
T Consensus 319 ~~i~~~~g~~~~~~~~~~~------------------------~~~-------~~~~~~d~~k~~~~lG~~p~~ 361 (397)
T 1gy8_A 319 EVARKTTGHPIPVRECGRR------------------------EGD-------PAYLVAASDKAREVLGWKPKY 361 (397)
T ss_dssp HHHHHHHCCCCCEEEECCC------------------------TTC-------CSEECBCCHHHHHHTCCCCSC
T ss_pred HHHHHHhCCCCCeeeCCCC------------------------CCc-------ccccccCHHHHHHHhCCCCCc
Confidence 9999999988776655421 000 012346888888899999965
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-32 Score=259.16 Aligned_cols=271 Identities=17% Similarity=0.118 Sum_probs=196.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+|+|||||||||||++++++|+++|++|++++|++.+... .....+....+++++.+|++|++++.++++++ ++|
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~d 88 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLRELGIEGDIQYEDGDMADACSVQRAVIKA--QPQ 88 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH--CCS
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhccccCceEEEECCCCCHHHHHHHHHHc--CCC
Confidence 46899999999999999999999999999999998764310 11111212247899999999999999999873 469
Q ss_pred EEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCC-CEEEEEccccccC--------------CChhHHHHHHH
Q 043385 164 VVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGA-SHFVLLSAICVQK--------------PLLEFQRAKLK 223 (405)
Q Consensus 164 ~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v-~~~V~~Ss~~~~~--------------~~~~y~~sK~~ 223 (405)
+|||||+... .++...+++|+.++.+++++|++.++ ++|||+||.++|. |.+.|+.+|.+
T Consensus 89 ~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~ 168 (335)
T 1rpn_A 89 EVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLY 168 (335)
T ss_dssp EEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred EEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHH
Confidence 9999999653 24556789999999999999999986 8999999998873 34679999999
Q ss_pred HHHHHHHHhhhcCCceEEEEecCCcccCch----------HHHHHHHhCC-CeEEecCCeeeehhhc-----------cc
Q 043385 224 FEAEMMKVAEEDSGFTYSIVRPTAFFKSLG----------GQVELVKEGK-PYVMFGDGKLCAYCVL-----------SE 281 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------~~~~~~~~g~-~~~~~g~g~~~~~~~~-----------~~ 281 (405)
+|.+++.++. ..+++++++||+.+|||.. .++..+..|. +...+|++.+.+++++ ..
T Consensus 169 ~e~~~~~~~~-~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~ 247 (335)
T 1rpn_A 169 GHWITVNYRE-SFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQ 247 (335)
T ss_dssp HHHHHHHHHH-HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHh
Confidence 9999998876 4689999999999999842 1233445565 4445788766551111 01
Q ss_pred ccccceEeccCCCCCCCHHHHHHHHHHHcCCCCC-eeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhc
Q 043385 282 DKINQILPIGGPGKALTPLEQGEILFRLLGKEPK-FLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESML 360 (405)
Q Consensus 282 ~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (405)
...+++||++++ +.+|+.|+++.+.+.+|.+.. ..+++.. ..... .....
T Consensus 248 ~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~---------------------~~~~~-------~~~~~ 298 (335)
T 1rpn_A 248 QDKADDYVVATG-VTTTVRDMCQIAFEHVGLDYRDFLKIDPA---------------------FFRPA-------EVDVL 298 (335)
T ss_dssp SSSCCCEEECCS-CEEEHHHHHHHHHHTTTCCGGGTEEECGG---------------------GCCSS-------CCCBC
T ss_pred cCCCCEEEEeCC-CCccHHHHHHHHHHHhCCCcccccccccc---------------------ccCCC-------cchhh
Confidence 122589999985 889999999999999998632 1222110 00000 01123
Q ss_pred ccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 361 ILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 361 ~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
.+|.++++..|||+|.+ ++++.+++.++
T Consensus 299 ~~d~~k~~~~lG~~p~~---~l~e~l~~~~~ 326 (335)
T 1rpn_A 299 LGNPAKAQRVLGWKPRT---SLDELIRMMVE 326 (335)
T ss_dssp CBCTHHHHHHHCCCCCS---CHHHHHHHHHH
T ss_pred cCCHHHHHHhcCCCcCC---CHHHHHHHHHH
Confidence 46888888899999955 44444444443
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-32 Score=260.40 Aligned_cols=260 Identities=13% Similarity=0.106 Sum_probs=193.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++|+|||||||||||++|+++|+++|++|++++|++.+.... ...+....+++++.+|++|++++.++++++ ++
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~ 81 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSL---FETARVADGMQSEIGDIRDQNKLLESIREF--QP 81 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCH---HHHTTTTTTSEEEECCTTCHHHHHHHHHHH--CC
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchh---hHhhccCCceEEEEccccCHHHHHHHHHhc--CC
Confidence 3568999999999999999999999999999999987654211 111111347899999999999999999873 48
Q ss_pred cEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcC-CCEEEEEccccccC---------------CChhHHHHH
Q 043385 163 DVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQK---------------PLLEFQRAK 221 (405)
Q Consensus 163 d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~~---------------~~~~y~~sK 221 (405)
|+||||||... .++...+++|+.++.+++++|++.+ +++|||+||.++|. |.+.|+.+|
T Consensus 82 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK 161 (357)
T 1rkx_A 82 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSK 161 (357)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHH
T ss_pred CEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHH
Confidence 99999999532 2445678999999999999999887 89999999998652 456799999
Q ss_pred HHHHHHHHHHhhhc--------CCceEEEEecCCcccCch--------HHHHHHHhCCCeEEecCCeeee------h---
Q 043385 222 LKFEAEMMKVAEED--------SGFTYSIVRPTAFFKSLG--------GQVELVKEGKPYVMFGDGKLCA------Y--- 276 (405)
Q Consensus 222 ~~~E~~~~~~~~~~--------~gi~~~ilRp~~v~g~~~--------~~~~~~~~g~~~~~~g~g~~~~------~--- 276 (405)
..+|++++.++.+. .|++++++||+++|||.. .++..+..|.++.+ +++...+ +
T Consensus 162 ~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva~ 240 (357)
T 1rkx_A 162 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPLS 240 (357)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHHH
Confidence 99999999887532 399999999999999853 24455667776654 3444433 1
Q ss_pred ----hhcc----cccccceEeccCC-CCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhh
Q 043385 277 ----CVLS----EDKINQILPIGGP-GKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEF 347 (405)
Q Consensus 277 ----~~~~----~~~~~~~y~i~~~-g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (405)
++.. +...+++||+++. ++.+|+.|+++.+.+.+|.+.++...+.. . .
T Consensus 241 a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------------~---~ 297 (357)
T 1rkx_A 241 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNA--------------------H---P 297 (357)
T ss_dssp HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-----------------------------
T ss_pred HHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCC--------------------C---C
Confidence 1111 1256789999962 26899999999999999987665322110 0 0
Q ss_pred hhhhhhhhhhhhcccCccccccccccCCccc
Q 043385 348 GKIGRYYAAESMLILDPETGEYSAEKTPSYG 378 (405)
Q Consensus 348 ~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~ 378 (405)
. ......+|.++++..|||+|.+.
T Consensus 298 ~-------~~~~~~~d~~k~~~~lG~~p~~~ 321 (357)
T 1rkx_A 298 H-------EAHYLKLDCSKAKMQLGWHPRWN 321 (357)
T ss_dssp --------CCCCCCBCCHHHHHHHCCCCCCC
T ss_pred c-------CcccccCCHHHHHHHhCCCcCCc
Confidence 0 01223478888888999999664
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=262.95 Aligned_cols=274 Identities=16% Similarity=0.177 Sum_probs=199.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcC----------CC---CchhHhh--hccCCcEEEEcCCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIR----------GR---NDKEETL--NQLQGASVCFSDVTN 147 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~----------~~---~~~~~~~--~~~~~v~~~~~Dl~d 147 (405)
..+++|||||||||||++|+++|+++|++|++++|...... .. ....... ....+++++.+|++|
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 45789999999999999999999999999999998642210 00 0000000 012478999999999
Q ss_pred HHHHHHHHHhhCCCccEEEEcccccCC-----CCc---chhHhHHHHHHHHHHHHHhcCC-CEEEEEccccccC------
Q 043385 148 LESLEKSLENLGTSIDVVVSCLASRSG-----GVK---DSWKIDYEANRNSLVAGRNCGA-SHFVLLSAICVQK------ 212 (405)
Q Consensus 148 ~~~l~~~~~~~~~~~d~Vv~~a~~~~~-----~~~---~~~~~n~~g~~~ll~aa~~~~v-~~~V~~Ss~~~~~------ 212 (405)
++++.+++++. ++|+||||||.... ++. ..+++|+.|+.+++++|++.++ ++||++||.++|.
T Consensus 89 ~~~~~~~~~~~--~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~ 166 (404)
T 1i24_A 89 FEFLAESFKSF--EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDI 166 (404)
T ss_dssp HHHHHHHHHHH--CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCB
T ss_pred HHHHHHHHhcc--CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCC
Confidence 99999999873 58999999996531 111 3678999999999999999887 5999999998763
Q ss_pred ---------------------CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch------------------
Q 043385 213 ---------------------PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG------------------ 253 (405)
Q Consensus 213 ---------------------~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~------------------ 253 (405)
|.+.|+.+|.++|.+++.++. ..|++++++||++||||..
T Consensus 167 ~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~-~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~ 245 (404)
T 1i24_A 167 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCK-AWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAV 245 (404)
T ss_dssp CSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTT
T ss_pred CccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHH-hcCCeEEEEecceeeCCCCCccccccccccccccccc
Confidence 246799999999999998775 3599999999999999852
Q ss_pred ------HHHHHHHhCCCeEEecCCeeeeh-------------hhccccccc--ceEeccCCCCCCCHHHHHHHHHHH---
Q 043385 254 ------GQVELVKEGKPYVMFGDGKLCAY-------------CVLSEDKIN--QILPIGGPGKALTPLEQGEILFRL--- 309 (405)
Q Consensus 254 ------~~~~~~~~g~~~~~~g~g~~~~~-------------~~~~~~~~~--~~y~i~~~g~~~t~~ela~~l~~~--- 309 (405)
.++..+..|.++.++++|.+.++ ++..+...+ ++||+++ +.+|+.|+++.+.+.
T Consensus 246 ~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~--~~~s~~e~~~~i~~~~~~ 323 (404)
T 1i24_A 246 FGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT--EQFSVNELASLVTKAGSK 323 (404)
T ss_dssp TCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS--EEEEHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC--CCCcHHHHHHHHHHHHHh
Confidence 24566677888888898876551 122223335 6999987 589999999999998
Q ss_pred cCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccch----hhHHHH
Q 043385 310 LGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGK----DTLEEF 385 (405)
Q Consensus 310 ~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~----~~l~~~ 385 (405)
+|.+.++..+|.+.. . ........|.++++ .|||+|++.. +.+.+|
T Consensus 324 ~g~~~~~~~~p~~~~------------------------~-----~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~ 373 (404)
T 1i24_A 324 LGLDVKKMTVPNPRV------------------------E-----AEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNF 373 (404)
T ss_dssp TTCCCCEEEECCSSC------------------------S-----CSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHH
T ss_pred hCCCccccccCcccC------------------------c-----cccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHH
Confidence 888877766664310 0 00112335778887 7999998743 445556
Q ss_pred HHHHhh
Q 043385 386 FERVLR 391 (405)
Q Consensus 386 ~~~~~~ 391 (405)
++...+
T Consensus 374 ~~~~~~ 379 (404)
T 1i24_A 374 AVQFKD 379 (404)
T ss_dssp HHHTGG
T ss_pred HHhhhh
Confidence 554443
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=263.52 Aligned_cols=223 Identities=17% Similarity=0.216 Sum_probs=176.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
|+||||||+||||++|+++|+++ |++|++++|+..... ......+....+++++.+|++|++++.++++. .++|+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~d~ 76 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQ--YQPDA 76 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH--HCCSE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCc--hhhhhhhhcCCCeEEEECCCCCHHHHHHHHhh--cCCCE
Confidence 57999999999999999999998 799999999752110 00011111124789999999999999999982 13999
Q ss_pred EEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhc--CCC-------EEEEEccccccC------------------
Q 043385 165 VVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNC--GAS-------HFVLLSAICVQK------------------ 212 (405)
Q Consensus 165 Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~--~v~-------~~V~~Ss~~~~~------------------ 212 (405)
||||||... .++...+++|+.++.+++++|.+. +++ +|||+||.++|.
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~ 156 (361)
T 1kew_A 77 VMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT 156 (361)
T ss_dssp EEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC
T ss_pred EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCC
Confidence 999999754 255678899999999999999998 887 999999987652
Q ss_pred ------CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeee----
Q 043385 213 ------PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCA---- 275 (405)
Q Consensus 213 ------~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~---- 275 (405)
|.+.|+.+|.++|.+++.++. +.+++++++||+.+|||.. .++..+..+.++.+++++.+.+
T Consensus 157 E~~~~~~~~~Y~~sK~~~e~~~~~~~~-~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 235 (361)
T 1kew_A 157 ETTAYAPSSPYSASKASSDHLVRAWRR-TYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLY 235 (361)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHH-HHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEE
T ss_pred CCCCCCCCCccHHHHHHHHHHHHHHHH-HhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEE
Confidence 346799999999999999876 3589999999999999863 2445666788888888876654
Q ss_pred --h------hhcccccccceEeccCCCCCCCHHHHHHHHHHHcCCCC
Q 043385 276 --Y------CVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEP 314 (405)
Q Consensus 276 --~------~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~ 314 (405)
+ .+......+++||++++ +.+++.|+++.+.+.+|.+.
T Consensus 236 v~Dva~a~~~~~~~~~~g~~~~v~~~-~~~s~~e~~~~i~~~~g~~~ 281 (361)
T 1kew_A 236 VEDHARALHMVVTEGKAGETYNIGGH-NEKKNLDVVFTICDLLDEIV 281 (361)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEECCC-CEEEHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEecCC-CeeeHHHHHHHHHHHhCCcC
Confidence 1 11123346789999985 78999999999999998654
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=258.89 Aligned_cols=247 Identities=15% Similarity=0.155 Sum_probs=188.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|+|||||||||||++|+++|+++|++|++++|+. .+|+.|.+++.++++.. ++|
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~--~~d 57 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE--RID 57 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH--CCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc--CCC
Confidence 357999999999999999999999999999988752 16999999999999821 299
Q ss_pred EEEEcccccC------CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC------------------C-ChhHH
Q 043385 164 VVVSCLASRS------GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK------------------P-LLEFQ 218 (405)
Q Consensus 164 ~Vv~~a~~~~------~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~------------------~-~~~y~ 218 (405)
+|||+|+... .++.+.+++|+.++.+++++|++.++++|||+||.++|. | .+.|+
T Consensus 58 ~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~ 137 (321)
T 1e6u_A 58 QVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYA 137 (321)
T ss_dssp EEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHH
T ss_pred EEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccH
Confidence 9999999754 244567899999999999999999999999999998873 1 14899
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------H----HHHHHHh----C-CCeEEecCCeeeeh------
Q 043385 219 RAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------G----QVELVKE----G-KPYVMFGDGKLCAY------ 276 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~----~~~~~~~----g-~~~~~~g~g~~~~~------ 276 (405)
.+|..+|++++.++. ..+++++++||+++|||.. . ++..+.. | .++.+++++.+.++
T Consensus 138 ~sK~~~E~~~~~~~~-~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~D 216 (321)
T 1e6u_A 138 IAKIAGIKLCESYNR-QYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDD 216 (321)
T ss_dssp HHHHHHHHHHHHHHH-HHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHH
T ss_pred HHHHHHHHHHHHHHH-HhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHH
Confidence 999999999998875 4599999999999999853 2 3344433 3 56777888776651
Q ss_pred -------hhccccc--------ccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccch
Q 043385 277 -------CVLSEDK--------INQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSL 341 (405)
Q Consensus 277 -------~~~~~~~--------~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 341 (405)
++..+.. .+++||++++ +.+|+.|+++.+.+.+|.+.++...|.. +
T Consensus 217 va~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------------~-- 277 (321)
T 1e6u_A 217 MAAASIHVMELAHEVWLENTQPMLSHINVGTG-VDCTIRELAQTIAKVVGYKGRVVFDASK----------------P-- 277 (321)
T ss_dssp HHHHHHHHHHSCHHHHHHTSBTTBCCEEESCS-CCEEHHHHHHHHHHHHTCCSEEEEETTS----------------C--
T ss_pred HHHHHHHHHhCcccccccccccCCceEEeCCC-CCccHHHHHHHHHHHhCCCCceEeCCCC----------------C--
Confidence 1222222 2689999985 8999999999999999987766554421 0
Q ss_pred hhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 342 EDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
.. .....+|.++++. |||+|.+ ++++.+++.++
T Consensus 278 ------~~-------~~~~~~d~~k~~~-lG~~p~~---~~~~~l~~~~~ 310 (321)
T 1e6u_A 278 ------DG-------TPRKLLDVTRLHQ-LGWYHEI---SLEAGLASTYQ 310 (321)
T ss_dssp ------CC-------CSBCCBCCHHHHH-TTCCCCC---CHHHHHHHHHH
T ss_pred ------CC-------cccccCCHHHHHh-cCCccCC---cHHHHHHHHHH
Confidence 00 0123468888888 9999954 44555544443
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-31 Score=255.42 Aligned_cols=268 Identities=17% Similarity=0.227 Sum_probs=193.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||+||||++++++|+++|++|++++|...........+.... ..+++++.+|++|++++.+++++ .++|+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~--~~~D~v 77 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHD--HAIDTV 77 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHH--TTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhc--cCCCEE
Confidence 589999999999999999999999999999886443211111111111 23688999999999999999985 258999
Q ss_pred EEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------C-ChhHHHHHHHHH
Q 043385 166 VSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------P-LLEFQRAKLKFE 225 (405)
Q Consensus 166 v~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~-~~~y~~sK~~~E 225 (405)
|||||... ..+.+.+++|+.++.+++++|++.++++||++||.++|. | .+.|+.+|.++|
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 157 (338)
T 1udb_A 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVE 157 (338)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHH
T ss_pred EECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHH
Confidence 99999643 134457899999999999999999999999999998762 2 568999999999
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCch-------------HHH----HHHH-hCCCeEEec------CCeeee------
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSLG-------------GQV----ELVK-EGKPYVMFG------DGKLCA------ 275 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------------~~~----~~~~-~g~~~~~~g------~g~~~~------ 275 (405)
++++.++.+..+++++++||+++|||.. .++ .... .+.++.++| +|.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 237 (338)
T 1udb_A 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHH
Confidence 9999987643489999999999998721 122 2222 344555554 444443
Q ss_pred hh-------hcccc-cc-cceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhh
Q 043385 276 YC-------VLSED-KI-NQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAE 346 (405)
Q Consensus 276 ~~-------~~~~~-~~-~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (405)
++ +.... .. +++||++++ +.+|+.|+++.+.+.+|.+.++...|..
T Consensus 238 Dva~a~~~~l~~~~~~~~~~~yni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~------------------------ 292 (338)
T 1udb_A 238 DLADGHVVAMEKLANKPGVHIYNLGAG-VGNSVLDVVNAFSKACGKPVNYHFAPRR------------------------ 292 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCS-CCEEHHHHHHHHHHHHTSCCCEEEECCC------------------------
T ss_pred HHHHHHHHHHhhhhccCCCcEEEecCC-CceeHHHHHHHHHHHhCCCCcceeCCCC------------------------
Confidence 11 11111 22 379999985 8999999999999999988766554421
Q ss_pred hhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 347 FGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 347 ~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
.+.. ....+|.++++..|||+|.+ ++++.+++.++
T Consensus 293 ~~~~-------~~~~~d~~k~~~~lG~~p~~---~l~~~l~~~~~ 327 (338)
T 1udb_A 293 EGDL-------PAYWADASKADRELNWRVTR---TLDEMAQDTWH 327 (338)
T ss_dssp TTCC-------SBCCBCCHHHHHHHCCCCCC---CHHHHHHHHHH
T ss_pred CCch-------hhhhcCHHHHHHHcCCCcCC---CHHHHHHHHHH
Confidence 0000 12336788888899999965 45555555443
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=257.77 Aligned_cols=260 Identities=15% Similarity=0.120 Sum_probs=192.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+|+|||||||||||++|+++|+++ |++|++++|++.+. . +. .+++++.+|++|++++.++++. .++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------~-~~--~~~~~~~~D~~d~~~~~~~~~~--~~~ 69 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNT-------D-VV--NSGPFEVVNALDFNQIEHLVEV--HKI 69 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSC-------H-HH--HSSCEEECCTTCHHHHHHHHHH--TTC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccc-------c-cc--CCCceEEecCCCHHHHHHHHhh--cCC
Confidence 478999999999999999999999 89999999986542 1 11 2678999999999999999983 139
Q ss_pred cEEEEcccccC----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------CChhHHHHHHH
Q 043385 163 DVVVSCLASRS----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------PLLEFQRAKLK 223 (405)
Q Consensus 163 d~Vv~~a~~~~----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------~~~~y~~sK~~ 223 (405)
|+|||+|+... .++...+++|+.++.+++++|++.++++|||+||.++|. |.+.|+.+|.+
T Consensus 70 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~ 149 (312)
T 2yy7_A 70 TDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQA 149 (312)
T ss_dssp CEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHH
T ss_pred CEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHH
Confidence 99999999753 245567899999999999999999999999999998873 25689999999
Q ss_pred HHHHHHHHhhhcCCceEEEEecCCcccCc----h----HH---HHHHHhCCCeEEecCCeeee-------------hhhc
Q 043385 224 FEAEMMKVAEEDSGFTYSIVRPTAFFKSL----G----GQ---VELVKEGKPYVMFGDGKLCA-------------YCVL 279 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~~~ilRp~~v~g~~----~----~~---~~~~~~g~~~~~~g~g~~~~-------------~~~~ 279 (405)
+|++++.++. ..+++++++||+++|||. . .+ +.....++++..++++.+.+ .++.
T Consensus 150 ~e~~~~~~~~-~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 228 (312)
T 2yy7_A 150 GERWCEYYHN-IYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMK 228 (312)
T ss_dssp HHHHHHHHHH-HHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHh
Confidence 9999988775 469999999999999953 1 12 22233455566677766544 1122
Q ss_pred cccc---ccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhh
Q 043385 280 SEDK---INQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAA 356 (405)
Q Consensus 280 ~~~~---~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (405)
.+.. .+++||+++ +.+|+.|+++.+.+.+|. ..+...|.. . .. .. .
T Consensus 229 ~~~~~~~~~~~~ni~~--~~~s~~e~~~~i~~~~~~-~~i~~~~~~--~-----------------~~-----~~----~ 277 (312)
T 2yy7_A 229 APVEKIKIHSSYNLAA--MSFTPTEIANEIKKHIPE-FTITYEPDF--R-----------------QK-----IA----D 277 (312)
T ss_dssp SCGGGCCCSSCEECCS--EEECHHHHHHHHHTTCTT-CEEEECCCT--H-----------------HH-----HH----T
T ss_pred CcccccccCceEEeCC--CccCHHHHHHHHHHHCCC-CceEeccCc--c-----------------cc-----cc----c
Confidence 2222 248999986 689999999999999983 222222210 0 00 00 0
Q ss_pred hhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 357 ESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 357 ~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
.....+|.++++..|||+|++ ++++.+++.++
T Consensus 278 ~~~~~~d~~k~~~~lG~~p~~---~l~~~l~~~~~ 309 (312)
T 2yy7_A 278 SWPASIDDSQAREDWDWKHTF---DLESMTKDMIE 309 (312)
T ss_dssp TSCSSBCCHHHHHHHCCCCCC---CHHHHHHHHHH
T ss_pred cccccCCHHHHHHHcCCCCCC---CHHHHHHHHHH
Confidence 011236888888899999954 56666666553
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-32 Score=258.49 Aligned_cols=251 Identities=17% Similarity=0.207 Sum_probs=190.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+++|+|||||||||||++|+++|+++|++|++++|....... ....+....+++++.+|+.|.. +.+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~-----~~~---- 91 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR---NVEHWIGHENFELINHDVVEPL-----YIE---- 91 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GTGGGTTCTTEEEEECCTTSCC-----CCC----
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchh---hhhhhccCCceEEEeCccCChh-----hcC----
Confidence 3567899999999999999999999999999999997643211 1111212347899999998863 344
Q ss_pred ccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-------------------CChhH
Q 043385 162 IDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-------------------PLLEF 217 (405)
Q Consensus 162 ~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-------------------~~~~y 217 (405)
+|+|||||+... .++...+++|+.++.+++++|++.++ +|||+||.++|. |.+.|
T Consensus 92 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y 170 (343)
T 2b69_A 92 VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACY 170 (343)
T ss_dssp CSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHH
T ss_pred CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCch
Confidence 999999999653 24456789999999999999999887 999999998872 23569
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch---------HHHHHHHhCCCeEEecCCeeeehhhc---------
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG---------GQVELVKEGKPYVMFGDGKLCAYCVL--------- 279 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~---------~~~~~~~~g~~~~~~g~g~~~~~~~~--------- 279 (405)
+.+|..+|++++.++. ..+++++++||+++|||.. .++..+..+.++.+++++.+.+.++.
T Consensus 171 ~~sK~~~E~~~~~~~~-~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~ 249 (343)
T 2b69_A 171 DEGKRVAETMCYAYMK-QEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLV 249 (343)
T ss_dssp HHHHHHHHHHHHHHHH-HHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHH
Confidence 9999999999998775 4699999999999999852 34566677888888888776551111
Q ss_pred --ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhh
Q 043385 280 --SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAE 357 (405)
Q Consensus 280 --~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (405)
.....+++||++++ +.+|+.|+++.+.+.+|.+.++..+|.+. .+ .
T Consensus 250 ~~~~~~~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~p~~~------------------~~-------------~ 297 (343)
T 2b69_A 250 ALMNSNVSSPVNLGNP-EEHTILEFAQLIKNLVGSGSEIQFLSEAQ------------------DD-------------P 297 (343)
T ss_dssp HHHTSSCCSCEEESCC-CEEEHHHHHHHHHHHHTCCCCEEEECCCT------------------TC-------------C
T ss_pred HHHhcCCCCeEEecCC-CCCcHHHHHHHHHHHhCCCCCceeCCCCC------------------CC-------------C
Confidence 11223789999986 89999999999999999988777666430 00 0
Q ss_pred hhcccCccccccccccCCccc
Q 043385 358 SMLILDPETGEYSAEKTPSYG 378 (405)
Q Consensus 358 ~~~~~d~~~~~~~lg~~P~~~ 378 (405)
.....|.++++..|||.|.+.
T Consensus 298 ~~~~~d~~k~~~~lG~~p~~~ 318 (343)
T 2b69_A 298 QKRKPDIKKAKLMLGWEPVVP 318 (343)
T ss_dssp CCCCBCCHHHHHHHCCCCCSC
T ss_pred ceecCCHHHHHHHcCCCCCCC
Confidence 112357788888999999653
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-32 Score=260.85 Aligned_cols=226 Identities=15% Similarity=0.164 Sum_probs=175.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh-C
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL-G 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~ 159 (405)
.+++|+|||||||||||++|+++|+++| ++|++++|++.... .....++. +.+|++|.+.+.+++++. .
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--------~~~~~~~~-~~~d~~~~~~~~~~~~~~~~ 113 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--------FVNLVDLN-IADYMDKEDFLIQIMAGEEF 113 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--------GGGTTTSC-CSEEEEHHHHHHHHHTTCCC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--------hhcccCce-EeeecCcHHHHHHHHhhccc
Confidence 3456899999999999999999999999 99999999865421 11122344 678999999999888731 0
Q ss_pred CCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKL 222 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~ 222 (405)
+++|+|||+|+.... ++.+.+++|+.++.+++++|++.++ +|||+||.++|. |.+.|+.+|.
T Consensus 114 ~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~ 192 (357)
T 2x6t_A 114 GDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKF 192 (357)
T ss_dssp SSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHH
T ss_pred CCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHH
Confidence 249999999997543 4456789999999999999999999 999999998873 3568999999
Q ss_pred HHHHHHHHHhhhcCCceEEEEecCCcccCch-----------HHHHHHHhCCCeEEecCCee-ee------h-------h
Q 043385 223 KFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----------GQVELVKEGKPYVMFGDGKL-CA------Y-------C 277 (405)
Q Consensus 223 ~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----------~~~~~~~~g~~~~~~g~g~~-~~------~-------~ 277 (405)
++|++++.++. ..+++++++||+++|||.. .++..+..+.++.+++++.+ .+ + +
T Consensus 193 ~~E~~~~~~~~-~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~ 271 (357)
T 2x6t_A 193 LFDEYVRQILP-EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWF 271 (357)
T ss_dssp HHHHHHHHHGG-GCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHH
Confidence 99999999876 4699999999999999852 23455677888878888766 44 1 1
Q ss_pred hcccccccceEeccCCCCCCCHHHHHHHHHHHcCCC-CCeeecCh
Q 043385 278 VLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKE-PKFLKVPI 321 (405)
Q Consensus 278 ~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~-~~~~~~p~ 321 (405)
+..+ . +++||++++ +.+|+.|+++.+.+.+|.+ +...+.|.
T Consensus 272 ~~~~-~-~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 313 (357)
T 2x6t_A 272 LENG-V-SGIFNLGTG-RAESFQAVADATLAYHKKGQIEYIPFPD 313 (357)
T ss_dssp HHHC-C-CEEEEESCS-CCEEHHHHHHHHHHHHTCCCCEEECCCG
T ss_pred HhcC-C-CCeEEecCC-CcccHHHHHHHHHHHcCCCCceecCCCc
Confidence 1222 2 889999985 8999999999999999987 44444443
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-32 Score=254.25 Aligned_cols=243 Identities=18% Similarity=0.248 Sum_probs=189.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|||||||||||++++++|+++|++|++++|. .+|+.|.+.+.++++.. ++|+|
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~--~~d~v 60 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI--RPHII 60 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH--CCSEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc--CCCEE
Confidence 589999999999999999999999999999992 17999999999999842 49999
Q ss_pred EEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHHH
Q 043385 166 VSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFEA 226 (405)
Q Consensus 166 v~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E~ 226 (405)
||+|+... .++...+++|+.++.+++++|++.++ ||||+||.++|. |.+.|+.+|.++|+
T Consensus 61 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 139 (287)
T 3sc6_A 61 IHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQ 139 (287)
T ss_dssp EECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred EECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999764 35566889999999999999999998 799999998872 35789999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCch-----HHHHHHHhCCCeEEecCCeeee-----------hhhcccccccceEec
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSLG-----GQVELVKEGKPYVMFGDGKLCA-----------YCVLSEDKINQILPI 290 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~~-----~~~~~~~~g~~~~~~g~g~~~~-----------~~~~~~~~~~~~y~i 290 (405)
+++.++ .+++++||+.+|||.. .++..+..+.++.+.|+....+ .++..+ . +++||+
T Consensus 140 ~~~~~~-----~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~-~~~~~i 212 (287)
T 3sc6_A 140 FVKELH-----NKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTS-L-YGTYHV 212 (287)
T ss_dssp HHHHHC-----SSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSC-C-CEEEEC
T ss_pred HHHHhC-----CCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCC-C-CCeEEE
Confidence 998853 4789999999999842 3445555678787777632222 122222 2 789999
Q ss_pred cCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccc
Q 043385 291 GGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYS 370 (405)
Q Consensus 291 ~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 370 (405)
+++ +.+|+.|+++.+.+.+|.+.++.++|.+.+. ... . ......+|.++++ .
T Consensus 213 ~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-------------~~~------~-------~~~~~~~d~~k~~-~ 264 (287)
T 3sc6_A 213 SNT-GSCSWFEFAKKIFSYANMKVNVLPVSTEEFG-------------AAA------A-------RPKYSIFQHNMLR-L 264 (287)
T ss_dssp CCB-SCEEHHHHHHHHHHHHTCCCEEEEECHHHHC-------------CSS------C-------CCSBCCBCCHHHH-H
T ss_pred cCC-CcccHHHHHHHHHHHcCCCcceeeeehhhcC-------------ccc------C-------CCCcccccHHHHH-h
Confidence 986 7999999999999999999888888765321 000 0 0112346888888 8
Q ss_pred cccCCccchhhHHHHHHHHhhc
Q 043385 371 AEKTPSYGKDTLEEFFERVLRE 392 (405)
Q Consensus 371 lg~~P~~~~~~l~~~~~~~~~~ 392 (405)
+||.|. .++++.+++.++.
T Consensus 265 lg~~p~---~~~~~~l~~~~~~ 283 (287)
T 3sc6_A 265 NGFLQM---PSWEEGLERFFIE 283 (287)
T ss_dssp TTCCCC---CBHHHHHHHHHHH
T ss_pred hCCCCC---ccHHHHHHHHHHH
Confidence 999994 4666777666653
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-31 Score=257.65 Aligned_cols=222 Identities=19% Similarity=0.247 Sum_probs=174.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHH--hhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLE--NLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~~~ 160 (405)
+++|+||||||||+||++|+++|+++|++|++++|++............+.. .+++++.+|++|.+++.++++ +
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~-~~v~~~~~Dl~d~~~l~~~~~~~~--- 83 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED-KGAIIVYGLINEQEAMEKILKEHE--- 83 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHH-TTCEEEECCTTCHHHHHHHHHHTT---
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHh-CCcEEEEeecCCHHHHHHHHhhCC---
Confidence 3457999999999999999999999999999999987432111111112222 589999999999999999999 7
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcC-CCEEEEEcccccc-------CCChhHHHHHHHHHHHHHHHh
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQ-------KPLLEFQRAKLKFEAEMMKVA 232 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~-------~~~~~y~~sK~~~E~~~~~~~ 232 (405)
+|+|||+++. .|+.++.+++++|++.| +++||+ |+.+.. .|...|+.+|..+|+++++
T Consensus 84 -~d~Vi~~a~~----------~n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~-- 149 (346)
T 3i6i_A 84 -IDIVVSTVGG----------ESILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEE-- 149 (346)
T ss_dssp -CCEEEECCCG----------GGGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHH--
T ss_pred -CCEEEECCch----------hhHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHH--
Confidence 9999999986 38889999999999999 999996 655442 3557899999999999987
Q ss_pred hhcCCceEEEEecCCcccCchH-HHHHH---HhCCCeEEecCCeeee-------------hhhcccccccceEeccCCCC
Q 043385 233 EEDSGFTYSIVRPTAFFKSLGG-QVELV---KEGKPYVMFGDGKLCA-------------YCVLSEDKINQILPIGGPGK 295 (405)
Q Consensus 233 ~~~~gi~~~ilRp~~v~g~~~~-~~~~~---~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y~i~~~g~ 295 (405)
.|++++++|||.+||++.. +.... ..+..+.++|+|+..+ .++..+...+++|+++++|+
T Consensus 150 ---~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~ 226 (346)
T 3i6i_A 150 ---SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCN 226 (346)
T ss_dssp ---TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGG
T ss_pred ---cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEEEEeCCCC
Confidence 7999999999999997532 22222 2456677888887654 22334455688999987668
Q ss_pred CCCHHHHHHHHHHHcCCCCCeeecChHHHH
Q 043385 296 ALTPLEQGEILFRLLGKEPKFLKVPIGIMD 325 (405)
Q Consensus 296 ~~t~~ela~~l~~~~g~~~~~~~~p~~~~~ 325 (405)
.+|+.|+++.+.+.+|++.++..+|.+.+.
T Consensus 227 ~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 256 (346)
T 3i6i_A 227 CLNINELASVWEKKIGRTLPRVTVTEDDLL 256 (346)
T ss_dssp EECHHHHHHHHHHHHTSCCCEEEECHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCceEecCHHHHH
Confidence 999999999999999999999999988654
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-31 Score=254.03 Aligned_cols=219 Identities=19% Similarity=0.251 Sum_probs=170.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+++|+|||||||||||++|+++|+++|++|++++|+..... .......+++++.+|++|++++.++++.+ +
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~--~ 88 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR------EVLPPVAGLSVIEGSVTDAGLLERAFDSF--K 88 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG------GGSCSCTTEEEEECCTTCHHHHHHHHHHH--C
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch------hhhhccCCceEEEeeCCCHHHHHHHHhhc--C
Confidence 467789999999999999999999999999999999765431 11122257899999999999999999821 2
Q ss_pred ccEEEEcccccCCC---CcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHH
Q 043385 162 IDVVVSCLASRSGG---VKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKF 224 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~---~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~ 224 (405)
+|+||||||..... ..+ +++|+.++.+++++|.+.++++||++||.++|. +.+.|+.+|.++
T Consensus 89 ~D~vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~ 167 (330)
T 2pzm_A 89 PTHVVHSAAAYKDPDDWAED-AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAG 167 (330)
T ss_dssp CSEEEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHH
T ss_pred CCEEEECCccCCCccccChh-HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHH
Confidence 99999999976431 112 789999999999999999999999999998873 457899999999
Q ss_pred HHHHHHHhhhcCCceEEEEecCCcccCch--HH----HHHHHhCCCeEEecCCeeee------hhhc-------cccccc
Q 043385 225 EAEMMKVAEEDSGFTYSIVRPTAFFKSLG--GQ----VELVKEGKPYVMFGDGKLCA------YCVL-------SEDKIN 285 (405)
Q Consensus 225 E~~~~~~~~~~~gi~~~ilRp~~v~g~~~--~~----~~~~~~g~~~~~~g~g~~~~------~~~~-------~~~~~~ 285 (405)
|.+++. .+++++++||+++|||.. .+ +..+..+. ..++++. .+ +++. .... +
T Consensus 168 e~~~~~-----~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~-g 238 (330)
T 2pzm_A 168 EAFLMM-----SDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP-T 238 (330)
T ss_dssp HHHHHT-----CSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC-C
T ss_pred HHHHHH-----cCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC-C
Confidence 999887 489999999999999863 22 34445554 3344443 22 2222 1223 8
Q ss_pred ceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecC
Q 043385 286 QILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVP 320 (405)
Q Consensus 286 ~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p 320 (405)
++||++++ +.+|+.|+++.+.+.+|.+ ++...|
T Consensus 239 ~~~~v~~~-~~~s~~e~~~~i~~~~g~~-~~~~~~ 271 (330)
T 2pzm_A 239 GVFNVSTG-EGHSIKEVFDVVLDYVGAT-LAEPVP 271 (330)
T ss_dssp EEEEESCS-CCEEHHHHHHHHHHHHTCC-CSSCCC
T ss_pred CEEEeCCC-CCCCHHHHHHHHHHHhCCC-CceeCC
Confidence 89999985 8999999999999999987 444444
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.1e-31 Score=255.04 Aligned_cols=227 Identities=15% Similarity=0.093 Sum_probs=174.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|+|||||||||||++++++|+++|++|++++|++.+... .....+....+++++.+|++|++++.++++++ ++|
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~d 77 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV--QPD 77 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH--CCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc--CCC
Confidence 46899999999999999999999999999999998765321 11111211246889999999999999999873 469
Q ss_pred EEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCC-CEEEEEcccccc--------------CCChhHHHHHHH
Q 043385 164 VVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGA-SHFVLLSAICVQ--------------KPLLEFQRAKLK 223 (405)
Q Consensus 164 ~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v-~~~V~~Ss~~~~--------------~~~~~y~~sK~~ 223 (405)
+||||||... .++...+++|+.++.+++++|++.++ ++|||+||.++| .|.+.|+.+|.+
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~ 157 (345)
T 2z1m_A 78 EVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLF 157 (345)
T ss_dssp EEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred EEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHH
Confidence 9999999753 34556889999999999999999887 899999999776 245689999999
Q ss_pred HHHHHHHHhhhcCCceEEEEecCCcccCchH----------HHHHHHhCCC-eEEecCCeeeehhhc-----------cc
Q 043385 224 FEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG----------QVELVKEGKP-YVMFGDGKLCAYCVL-----------SE 281 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~----------~~~~~~~g~~-~~~~g~g~~~~~~~~-----------~~ 281 (405)
+|.+++.++. +.+++++++|+.++|||... ++..+..+.. ...++++.+.+++++ ..
T Consensus 158 ~e~~~~~~~~-~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~ 236 (345)
T 2z1m_A 158 GHWITVNYRE-AYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQ 236 (345)
T ss_dssp HHHHHHHHHH-HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-HhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHh
Confidence 9999998876 46899999999999998521 1223345543 335677655441111 11
Q ss_pred ccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCe
Q 043385 282 DKINQILPIGGPGKALTPLEQGEILFRLLGKEPKF 316 (405)
Q Consensus 282 ~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~ 316 (405)
...+++||++++ +.+++.|+++.+.+.+|.+.++
T Consensus 237 ~~~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~ 270 (345)
T 2z1m_A 237 QPEPDDYVIATG-ETHTVREFVEKAAKIAGFDIEW 270 (345)
T ss_dssp SSSCCCEEECCS-CCEEHHHHHHHHHHHTTCCEEE
T ss_pred CCCCceEEEeCC-CCccHHHHHHHHHHHhCCCccc
Confidence 122479999985 8999999999999999987554
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-31 Score=254.49 Aligned_cols=217 Identities=16% Similarity=0.139 Sum_probs=168.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.++|+|||||||||||++++++|+++|++|++++|+..... ..+...++++++.+|++|++++.+++++ .++
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~l~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~ 90 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR------EHLKDHPNLTFVEGSIADHALVNQLIGD--LQP 90 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG------GGSCCCTTEEEEECCTTCHHHHHHHHHH--HCC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch------hhHhhcCCceEEEEeCCCHHHHHHHHhc--cCC
Confidence 46789999999999999999999999999999999865421 1122225789999999999999999986 358
Q ss_pred cEEEEcccccCCC-Ccc-hhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------CC-hhHHHHHHHH
Q 043385 163 DVVVSCLASRSGG-VKD-SWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------PL-LEFQRAKLKF 224 (405)
Q Consensus 163 d~Vv~~a~~~~~~-~~~-~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------~~-~~y~~sK~~~ 224 (405)
|+||||||..... ..+ .+++|+.++.+++++|++.++++||++||.++|. |. +.|+.+|.++
T Consensus 91 D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~ 170 (333)
T 2q1w_A 91 DAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSAN 170 (333)
T ss_dssp SEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHH
T ss_pred cEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHH
Confidence 9999999976431 111 1789999999999999999999999999999885 44 7899999999
Q ss_pred HHHHHH-HhhhcCCceEEEEecCCcccCch------HHHHHHHhCCCeEEecCCeeee-------------hhhcccccc
Q 043385 225 EAEMMK-VAEEDSGFTYSIVRPTAFFKSLG------GQVELVKEGKPYVMFGDGKLCA-------------YCVLSEDKI 284 (405)
Q Consensus 225 E~~~~~-~~~~~~gi~~~ilRp~~v~g~~~------~~~~~~~~g~~~~~~g~g~~~~-------------~~~~~~~~~ 284 (405)
|.+++. ++ +++++||+++|||.. .++..+..+. .+++ +...+ .++..+ .
T Consensus 171 E~~~~~s~~------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~-~- 239 (333)
T 2q1w_A 171 EDYLEYSGL------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGV-G- 239 (333)
T ss_dssp HHHHHHHTC------CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTC-C-
T ss_pred HHHHHhhhC------CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcC-C-
Confidence 999887 43 899999999999862 2444555565 2344 33332 112222 2
Q ss_pred cceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecC
Q 043385 285 NQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVP 320 (405)
Q Consensus 285 ~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p 320 (405)
+++||++++ +.+|+.|+++.+.+.+|.+ .+..+|
T Consensus 240 g~~~~v~~~-~~~s~~e~~~~i~~~~g~~-~~~~~~ 273 (333)
T 2q1w_A 240 HGAYHFSSG-TDVAIKELYDAVVEAMALP-SYPEPE 273 (333)
T ss_dssp CEEEECSCS-CCEEHHHHHHHHHHHTTCS-SCCCCE
T ss_pred CCEEEeCCC-CCccHHHHHHHHHHHhCCC-CceeCC
Confidence 889999985 8999999999999999987 443333
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.2e-31 Score=256.95 Aligned_cols=229 Identities=18% Similarity=0.191 Sum_probs=178.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-----CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-----FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-----~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+|+|||||||||||++|+++|+++| ++|++++|++.+.. . ...+++++.+|++|++.+.++++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------~-~~~~~~~~~~Dl~d~~~~~~~~~~~- 70 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------H-EDNPINYVQCDISDPDDSQAKLSPL- 70 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------C-CSSCCEEEECCTTSHHHHHHHHTTC-
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------c-ccCceEEEEeecCCHHHHHHHHhcC-
Confidence 3789999999999999999999999 99999999876532 1 1247899999999999999999863
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhc--CCCEEE-------EEccccccCC-----------------
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNC--GASHFV-------LLSAICVQKP----------------- 213 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V-------~~Ss~~~~~~----------------- 213 (405)
.++|+|||+|+....++.+.+++|+.++.+++++|++. ++++|| |+||.++|..
T Consensus 71 ~~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~ 150 (364)
T 2v6g_A 71 TDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKY 150 (364)
T ss_dssp TTCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSS
T ss_pred CCCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCcc
Confidence 12899999999876666778999999999999999998 799998 7999877621
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcCC-ceEEEEecCCcccCch----H------HHHHH--HhCCCeEEecCCeeee-----
Q 043385 214 LLEFQRAKLKFEAEMMKVAEEDSG-FTYSIVRPTAFFKSLG----G------QVELV--KEGKPYVMFGDGKLCA----- 275 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~~~g-i~~~ilRp~~v~g~~~----~------~~~~~--~~g~~~~~~g~g~~~~----- 275 (405)
.+.| ..+|+++++++. ..+ ++++++||+++|||.. . ++..+ ..|.++.++|++.+.+
T Consensus 151 ~~~y----~~~E~~~~~~~~-~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~ 225 (364)
T 2v6g_A 151 MNFY----YDLEDIMLEEVE-KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDC 225 (364)
T ss_dssp CCHH----HHHHHHHHHHHT-TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCC
T ss_pred chhh----HHHHHHHHHHhh-cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCC
Confidence 3356 357888887765 355 9999999999999753 1 23334 3677777778764321
Q ss_pred -----------hhhcccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCee--ecChHHHHHHHH
Q 043385 276 -----------YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFL--KVPIGIMDFAIG 329 (405)
Q Consensus 276 -----------~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~--~~p~~~~~~~~~ 329 (405)
.++..+...+++||++++ +.+|+.|+++.+.+.+|.+.... ++|.+.++..+.
T Consensus 226 ~~v~Dva~a~~~~~~~~~~~g~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~ 291 (364)
T 2v6g_A 226 SDADLIAEHHIWAAVDPYAKNEAFNVSNG-DVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKG 291 (364)
T ss_dssp EEHHHHHHHHHHHHHCGGGTTEEEEECCS-CCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTT
T ss_pred CcHHHHHHHHHHHHhCCCCCCceEEecCC-CcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhh
Confidence 112233346789999986 78999999999999999886655 778776665543
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=4.6e-32 Score=255.87 Aligned_cols=213 Identities=15% Similarity=0.180 Sum_probs=154.8
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCccE
Q 043385 87 NILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSIDV 164 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~d~ 164 (405)
+|||||||||||++|+++|+++| ++|++++|.+.... ...+. +++ +.+|++|.+.+.+++++.. +++|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-----~~~~~---~~~-~~~d~~~~~~~~~~~~~~~~~~~d~ 71 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLV---DLN-IADYMDKEDFLIQIMAGEEFGDVEA 71 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-----GHHHH---TSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-----hhhcC---cce-eccccccHHHHHHHHhccccCCCcE
Confidence 58999999999999999999999 99999999865421 01121 333 6789999999998887310 14899
Q ss_pred EEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHHHH
Q 043385 165 VVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFEAE 227 (405)
Q Consensus 165 Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E~~ 227 (405)
|||||+.... ++...+++|+.++.+++++|++.++ +|||+||.++|. |.+.|+.+|.++|.+
T Consensus 72 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~ 150 (310)
T 1eq2_A 72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEY 150 (310)
T ss_dssp EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred EEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence 9999997643 3455789999999999999999999 999999998872 356799999999999
Q ss_pred HHHHhhhcCCceEEEEecCCcccCchH-----------HHHHHHhCCCeEEecCCee-ee-------------hhhcccc
Q 043385 228 MMKVAEEDSGFTYSIVRPTAFFKSLGG-----------QVELVKEGKPYVMFGDGKL-CA-------------YCVLSED 282 (405)
Q Consensus 228 ~~~~~~~~~gi~~~ilRp~~v~g~~~~-----------~~~~~~~g~~~~~~g~g~~-~~-------------~~~~~~~ 282 (405)
++.++. ..|++++++||+++|||... ++..+..+.++.+++++.+ .+ .++..+
T Consensus 151 ~~~~~~-~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~- 228 (310)
T 1eq2_A 151 VRQILP-EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG- 228 (310)
T ss_dssp HHHHGG-GCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC-
T ss_pred HHHHHH-HcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcC-
Confidence 999876 47999999999999998632 3455667777777787766 43 112222
Q ss_pred cccceEeccCCCCCCCHHHHHHHHHHHcCCC
Q 043385 283 KINQILPIGGPGKALTPLEQGEILFRLLGKE 313 (405)
Q Consensus 283 ~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~ 313 (405)
. +++||++++ +.+|+.|+++.+.+.+|.+
T Consensus 229 ~-~~~~~i~~~-~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 229 V-SGIFNLGTG-RAESFQAVADATLAYHKKG 257 (310)
T ss_dssp C-CEEEEESCS-CCBCHHHHHHHC-------
T ss_pred C-CCeEEEeCC-CccCHHHHHHHHHHHcCCC
Confidence 2 889999985 8999999999999999986
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=250.93 Aligned_cols=269 Identities=16% Similarity=0.132 Sum_probs=189.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
|+||||||||+||++++++|+++ |++|++++|++++.. .+. ..+++++.+|++|++++.+++++ +|+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~-------~~~-~~~v~~~~~D~~d~~~l~~~~~~----~d~ 68 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVP-------DDW-RGKVSVRQLDYFNQESMVEAFKG----MDT 68 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSC-------GGG-BTTBEEEECCTTCHHHHHHHTTT----CSE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHH-------Hhh-hCCCEEEEcCCCCHHHHHHHHhC----CCE
Confidence 57999999999999999999998 899999999987542 122 24899999999999999999998 999
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC-ChhHHHHHHHHHHHHHHHhhhcCCceEEEE
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP-LLEFQRAKLKFEAEMMKVAEEDSGFTYSIV 243 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~-~~~y~~sK~~~E~~~~~~~~~~~gi~~~il 243 (405)
||||++.... ...|+.++++++++|++.|++||||+||.+.... ...+...+...|..+.. .|++++++
T Consensus 69 vi~~a~~~~~-----~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~~~~~~~~~~~~e~~~~~-----~g~~~~il 138 (289)
T 3e48_A 69 VVFIPSIIHP-----SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYFGYASRLLST-----SGIDYTYV 138 (289)
T ss_dssp EEECCCCCCS-----HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTCCSTTHHHHHHHHHHHHH-----HCCEEEEE
T ss_pred EEEeCCCCcc-----chhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCCCCccchhHHHHHHHHHH-----cCCCEEEE
Confidence 9999986532 2458999999999999999999999999775421 11223334456666654 79999999
Q ss_pred ecCCcccCchHHHHHHHhCCCeEEecCCeeee-------------hhhcccccccceEeccCCCCCCCHHHHHHHHHHHc
Q 043385 244 RPTAFFKSLGGQVELVKEGKPYVMFGDGKLCA-------------YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLL 310 (405)
Q Consensus 244 Rp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~ 310 (405)
||+++||+...++..+..+... .++.++... .++..+...+++||++ + +.+|+.|+++.+.+.+
T Consensus 139 rp~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~-~~~s~~e~~~~~~~~~ 215 (289)
T 3e48_A 139 RMAMYMDPLKPYLPELMNMHKL-IYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-G-YSYDMKELAAILSEAS 215 (289)
T ss_dssp EECEESTTHHHHHHHHHHHTEE-CCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-C-EEEEHHHHHHHHHHHH
T ss_pred eccccccccHHHHHHHHHCCCE-ecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-C-CcCCHHHHHHHHHHHH
Confidence 9999999987766555443332 234444332 2233344448899999 6 8999999999999999
Q ss_pred CCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHh
Q 043385 311 GKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVL 390 (405)
Q Consensus 311 g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~ 390 (405)
|+++++.++|.+.+......+..+. + ....+.... .......+....++.+|+.| +++++|++++.
T Consensus 216 g~~~~~~~~~~~~~~~~~~~p~~~~-------~--~~~~~~~~~-~~g~~~~~~~~~~~~~G~~p----~~~~~~~~~~~ 281 (289)
T 3e48_A 216 GTEIKYEPVSLETFAEMYDEPKGFG-------A--LLASMYHAG-ARGLLDQESNDFKQLVNDQP----QTLQSFLQENI 281 (289)
T ss_dssp TSCCEECCCCHHHHHHHTCCSTTHH-------H--HHHHHHHHH-HTTTTCCCCSHHHHHHSSCC----CCHHHHHHC--
T ss_pred CCceeEEeCCHHHHHHHhcCCccHH-------H--HHHHHHHHH-HCCCccccCchHHHHhCCCC----CCHHHHHHHHH
Confidence 9999999998876543321000000 0 000011111 11122234455677889988 89999999887
Q ss_pred hcc
Q 043385 391 REG 393 (405)
Q Consensus 391 ~~~ 393 (405)
.+.
T Consensus 282 ~~~ 284 (289)
T 3e48_A 282 LEH 284 (289)
T ss_dssp ---
T ss_pred Hhh
Confidence 653
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-31 Score=255.24 Aligned_cols=225 Identities=18% Similarity=0.119 Sum_probs=174.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh------ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN------QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~------~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
|+||||||+||||++++++|+++|++|++++|++..... .....+. ...+++++.+|++|++++.++++++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNT--GRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--TTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccch--hhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc-
Confidence 689999999999999999999999999999998754210 0011110 1247899999999999999999873
Q ss_pred CCccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCC---CEEEEEccccccC--------------CChhH
Q 043385 160 TSIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGA---SHFVLLSAICVQK--------------PLLEF 217 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v---~~~V~~Ss~~~~~--------------~~~~y 217 (405)
++|+||||||... .++...+++|+.++.+++++|++.++ ++|||+||.++|. |.+.|
T Consensus 102 -~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y 180 (375)
T 1t2a_A 102 -KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPY 180 (375)
T ss_dssp -CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHH
T ss_pred -CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChh
Confidence 4699999999754 24456789999999999999999988 8999999998873 45689
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch----------HHHHHHHhCC-CeEEecCCeeeehhhc-------
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG----------GQVELVKEGK-PYVMFGDGKLCAYCVL------- 279 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------~~~~~~~~g~-~~~~~g~g~~~~~~~~------- 279 (405)
+.+|.++|.+++.++. ..+++++++||+.+|||.. .++..+..|. +...+|++.+.+++++
T Consensus 181 ~~sK~~~e~~~~~~~~-~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a 259 (375)
T 1t2a_A 181 GAAKLYAYWIVVNFRE-AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA 259 (375)
T ss_dssp HHHHHHHHHHHHHHHH-HHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHH
Confidence 9999999999998876 4689999999999999742 1233445564 4456787766551111
Q ss_pred ----ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCe
Q 043385 280 ----SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKF 316 (405)
Q Consensus 280 ----~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~ 316 (405)
.....+++||++++ +.+|+.|+++.+.+.+|.+.++
T Consensus 260 ~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~~ 299 (375)
T 1t2a_A 260 MWLMLQNDEPEDFVIATG-EVHSVREFVEKSFLHIGKTIVW 299 (375)
T ss_dssp HHHHHHSSSCCCEEECCS-CCEEHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHhcCCCceEEEeCC-CcccHHHHHHHHHHHhCCCccc
Confidence 01122589999985 8999999999999999987543
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-31 Score=249.64 Aligned_cols=207 Identities=20% Similarity=0.176 Sum_probs=164.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 87 NILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|||||||||||++++++|+++ |++|++++|+.... .+++++.+|++|++++.++++. .++|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~--~~~d~ 65 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------GGIKFITLDVSNRDEIDRAVEK--YSIDA 65 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------TTCCEEECCTTCHHHHHHHHHH--TTCCE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------cCceEEEecCCCHHHHHHHHhh--cCCcE
Confidence 5899999999999999999998 89999999976532 1567899999999999999983 13999
Q ss_pred EEEcccccC----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------CChhHHHHHHHHH
Q 043385 165 VVSCLASRS----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------PLLEFQRAKLKFE 225 (405)
Q Consensus 165 Vv~~a~~~~----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------~~~~y~~sK~~~E 225 (405)
|||+|+... .++...+++|+.++.+++++|++.++++||++||.++|. |.+.|+.+|.++|
T Consensus 66 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e 145 (317)
T 3ajr_A 66 IFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAE 145 (317)
T ss_dssp EEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHH
T ss_pred EEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHH
Confidence 999998653 245567899999999999999999999999999998873 3578999999999
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCc--------hHH---HHHHHhCCCeEEecCCeeee------h-------hhccc
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSL--------GGQ---VELVKEGKPYVMFGDGKLCA------Y-------CVLSE 281 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~--------~~~---~~~~~~g~~~~~~g~g~~~~------~-------~~~~~ 281 (405)
.+++.++. ..+++++++||+.+||+. ..+ +.....++.+..++++.+.+ + ++..+
T Consensus 146 ~~~~~~~~-~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~ 224 (317)
T 3ajr_A 146 LLGQYYYE-KFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEAD 224 (317)
T ss_dssp HHHHHHHH-HHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCC
T ss_pred HHHHHHHH-hcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCC
Confidence 99988765 469999999999999953 111 22233455566666655544 1 12222
Q ss_pred cc---ccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 282 DK---INQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 282 ~~---~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
.. .+++||+++ ..+|+.|+++.+.+.+|
T Consensus 225 ~~~~~~g~~~~i~~--~~~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 225 RDKLVLRNGYNVTA--YTFTPSELYSKIKERIP 255 (317)
T ss_dssp GGGCSSCSCEECCS--EEECHHHHHHHHHTTCC
T ss_pred ccccccCceEecCC--ccccHHHHHHHHHHHCC
Confidence 21 258999986 57999999999999988
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-31 Score=248.27 Aligned_cols=244 Identities=19% Similarity=0.208 Sum_probs=189.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
.++|||||||||||++++++|+++|++|++++|+ .+|++|++++.+++++. ++|+
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~--~~d~ 66 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK--KPNV 66 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH--CCSE
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc--CCCE
Confidence 4799999999999999999999999999999985 17999999999999831 3999
Q ss_pred EEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHH
Q 043385 165 VVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFE 225 (405)
Q Consensus 165 Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E 225 (405)
|||||+... .++...+++|+.++.+++++|++.++ +|||+||.++|. |.+.|+.+|.++|
T Consensus 67 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E 145 (292)
T 1vl0_A 67 VINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGE 145 (292)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred EEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence 999999754 24556889999999999999999988 999999998873 3568999999999
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCchH----HHHHHHhCCCeEEecCCeeee----hh------hcccccccceEecc
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSLGG----QVELVKEGKPYVMFGDGKLCA----YC------VLSEDKINQILPIG 291 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~~~----~~~~~~~g~~~~~~g~g~~~~----~~------~~~~~~~~~~y~i~ 291 (405)
.+++.++ .+++++||+.+|||... ++..+..+.++.+.++....+ ++ +.... .+++||++
T Consensus 146 ~~~~~~~-----~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~i~ 219 (292)
T 1vl0_A 146 NFVKALN-----PKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK-NYGTFHCT 219 (292)
T ss_dssp HHHHHHC-----SSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT-CCEEEECC
T ss_pred HHHHhhC-----CCeEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC-CCcEEEec
Confidence 9998853 46999999999998433 334455677776666532211 11 11222 68899999
Q ss_pred CCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCcccccccc
Q 043385 292 GPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSA 371 (405)
Q Consensus 292 ~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 371 (405)
++ +.+|+.|+++.+.+.+|.+.++.++|.+... .. .. ......+|.++++..|
T Consensus 220 ~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------------~~-----~~-------~~~~~~~d~~k~~~~l 272 (292)
T 1vl0_A 220 CK-GICSWYDFAVEIFRLTGIDVKVTPCTTEEFP--------------RP-----AK-------RPKYSVLRNYMLELTT 272 (292)
T ss_dssp CB-SCEEHHHHHHHHHHHHCCCCEEEEECSTTSC--------------CS-----SC-------CCSBCCBCCHHHHHTT
T ss_pred CC-CCccHHHHHHHHHHHhCCCCceeeccccccC--------------cc-----cC-------CCccccccHHHHHHHc
Confidence 86 8999999999999999998777777654210 00 00 0112346888889899
Q ss_pred ccCCccchhhHHHHHHHHhh
Q 043385 372 EKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 372 g~~P~~~~~~l~~~~~~~~~ 391 (405)
||+| .++++.+++.++
T Consensus 273 G~~p----~~~~~~l~~~~~ 288 (292)
T 1vl0_A 273 GDIT----REWKESLKEYID 288 (292)
T ss_dssp CCCC----CBHHHHHHHHHH
T ss_pred CCCC----CCHHHHHHHHHH
Confidence 9999 378888877765
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-31 Score=248.03 Aligned_cols=252 Identities=13% Similarity=0.130 Sum_probs=186.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|+|||||| ||||++|+++|+++|++|++++|++.+. ..+.. .+++++.+|++|.+ +++ +|
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~-~~~~~~~~D~~d~~-----~~~----~d 65 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQM-------EAIRA-SGAEPLLWPGEEPS-----LDG----VT 65 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGH-------HHHHH-TTEEEEESSSSCCC-----CTT----CC
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhh-------hhHhh-CCCeEEEecccccc-----cCC----CC
Confidence 4589999998 9999999999999999999999987643 22222 48999999999954 555 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHh--cCCCEEEEEccccccC--------------CChhHHHHHHHHHHH
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRN--CGASHFVLLSAICVQK--------------PLLEFQRAKLKFEAE 227 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~--~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E~~ 227 (405)
+|||+|+..... ...++++++++++ .+++||||+||.++|. |.+.|+.+|.++|++
T Consensus 66 ~vi~~a~~~~~~--------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~ 137 (286)
T 3ius_A 66 HLLISTAPDSGG--------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQ 137 (286)
T ss_dssp EEEECCCCBTTB--------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHH
T ss_pred EEEECCCccccc--------cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999975432 1236789999998 6899999999998872 345799999999999
Q ss_pred HHHHhhhcCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeee------hh------hcccccccceEeccCCCC
Q 043385 228 MMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCA------YC------VLSEDKINQILPIGGPGK 295 (405)
Q Consensus 228 ~~~~~~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~------~~------~~~~~~~~~~y~i~~~g~ 295 (405)
++.+ .+++++++||+++|||....+..+..+.+..+.+++ +.+ ++ +......+++||++++ +
T Consensus 138 ~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~-~ 211 (286)
T 3ius_A 138 WQAV----PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPG-QVFSRIHVEDIAQVLAASMARPDPGAVYNVCDD-E 211 (286)
T ss_dssp HHHS----TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTT-CCBCEEEHHHHHHHHHHHHHSCCTTCEEEECCS-C
T ss_pred HHhh----cCCCEEEEeccceECCCchHHHHHhcCCccccCCCC-cccceEEHHHHHHHHHHHHhCCCCCCEEEEeCC-C
Confidence 9883 499999999999999976666566667777666654 332 11 1222336789999986 8
Q ss_pred CCCHHHHHHHHHHHcCCCCCe-eecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccC
Q 043385 296 ALTPLEQGEILFRLLGKEPKF-LKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKT 374 (405)
Q Consensus 296 ~~t~~ela~~l~~~~g~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~ 374 (405)
.+|+.|+++.+.+.+|.+.+. ++.+... .+.....+ ......+|.++++..|||+
T Consensus 212 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----------------------~~~~~~~~-~~~~~~~d~~k~~~~lG~~ 267 (286)
T 3ius_A 212 PVPPQDVIAYAAELQGLPLPPAVDFDKAD-----------------------LTPMARSF-YSENKRVRNDRIKEELGVR 267 (286)
T ss_dssp CBCHHHHHHHHHHHHTCCCCCEEEGGGSC-----------------------CCHHHHHT-TSCCCEECCHHHHHTTCCC
T ss_pred CccHHHHHHHHHHHcCCCCCcccchhhhc-----------------------cChhHHHh-hcCCceeehHHHHHHhCCC
Confidence 999999999999999987553 2222110 00000000 0122346899999999999
Q ss_pred CccchhhHHHHHHHHhhcc
Q 043385 375 PSYGKDTLEEFFERVLREG 393 (405)
Q Consensus 375 P~~~~~~l~~~~~~~~~~~ 393 (405)
|.+ .++++.+++.+++.
T Consensus 268 p~~--p~~~e~l~~~~~~~ 284 (286)
T 3ius_A 268 LKY--PNYRVGLEALQADA 284 (286)
T ss_dssp CSC--SSHHHHHHHHHHTC
T ss_pred CCc--CCHHHHHHHHHHhc
Confidence 932 15888888887653
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-31 Score=275.27 Aligned_cols=224 Identities=19% Similarity=0.298 Sum_probs=178.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHH-HHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLES-LEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-l~~~~~~~~~ 160 (405)
+++|+|||||||||||++++++|+++ |++|++++|+..+.. .+....+++++.+|++|.++ +.+++++
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~-------~~~~~~~v~~v~~Dl~d~~~~~~~~~~~--- 382 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS-------RFLNHPHFHFVEGDISIHSEWIEYHVKK--- 382 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTG-------GGTTCTTEEEEECCTTTCHHHHHHHHHH---
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhh-------hhccCCceEEEECCCCCcHHHHHHhhcC---
Confidence 35689999999999999999999998 899999999876532 12223578999999999765 7888888
Q ss_pred CccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------------CC
Q 043385 161 SIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------------PL 214 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------------~~ 214 (405)
+|+||||||.... ++.+.+++|+.++.+++++|++.+ ++|||+||.++|. |.
T Consensus 383 -~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~ 460 (660)
T 1z7e_A 383 -CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPR 460 (660)
T ss_dssp -CSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTT
T ss_pred -CCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCC
Confidence 9999999997542 345678899999999999999998 9999999998872 22
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch---------------HHHHHHHhCCCeEEecCCeeee----
Q 043385 215 LEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG---------------GQVELVKEGKPYVMFGDGKLCA---- 275 (405)
Q Consensus 215 ~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~---------------~~~~~~~~g~~~~~~g~g~~~~---- 275 (405)
+.|+.+|..+|.+++.++. ..|++++++||+++|||.. .++..+..+.++.+++++.+.+
T Consensus 461 ~~Y~~sK~~~E~~~~~~~~-~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~ 539 (660)
T 1z7e_A 461 WIYSVSKQLLDRVIWAYGE-KEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTD 539 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEE
T ss_pred CCcHHHHHHHHHHHHHHHH-HcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEE
Confidence 3799999999999998875 3699999999999999852 2445667788888888776554
Q ss_pred ---------hhhcccc--cccceEeccCCCC-CCCHHHHHHHHHHHcCCCCCeeecC
Q 043385 276 ---------YCVLSED--KINQILPIGGPGK-ALTPLEQGEILFRLLGKEPKFLKVP 320 (405)
Q Consensus 276 ---------~~~~~~~--~~~~~y~i~~~g~-~~t~~ela~~l~~~~g~~~~~~~~p 320 (405)
.++..+. ..+++||++++ + .+|+.|+++.+.+.+|.+.....+|
T Consensus 540 v~Dva~ai~~~l~~~~~~~~g~~~ni~~~-~~~~s~~el~~~i~~~~g~~~~~~~~p 595 (660)
T 1z7e_A 540 IRDGIEALYRIIENAGNRCDGEIINIGNP-ENEASIEELGEMLLASFEKHPLRHHFP 595 (660)
T ss_dssp HHHHHHHHHHHHHCGGGTTTTEEEEECCG-GGEEEHHHHHHHHHHHHHHCTTGGGSC
T ss_pred HHHHHHHHHHHHhCccccCCCeEEEECCC-CCCcCHHHHHHHHHHHhcCCCcccccC
Confidence 1122222 35789999984 5 7999999999999998764443444
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.8e-31 Score=251.13 Aligned_cols=265 Identities=17% Similarity=0.148 Sum_probs=194.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-------CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHH
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-------FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSL 155 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~ 155 (405)
+++|+||||||+||||++++++|+++| ++|++++|+..+... ....+++++.+|++|++++.+++
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~ 83 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEKLV 83 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHHHH
Confidence 567899999999999999999999999 899999998754321 11246889999999999999999
Q ss_pred HhhCCCccEEEEcccccC----CCCcchhHhHHHHHHHHHHHHHhcC-----CCEEEEEccccccC--------------
Q 043385 156 ENLGTSIDVVVSCLASRS----GGVKDSWKIDYEANRNSLVAGRNCG-----ASHFVLLSAICVQK-------------- 212 (405)
Q Consensus 156 ~~~~~~~d~Vv~~a~~~~----~~~~~~~~~n~~g~~~ll~aa~~~~-----v~~~V~~Ss~~~~~-------------- 212 (405)
++ ++|+||||||... .++...+++|+.++.+++++|++.+ +++||++||.++|.
T Consensus 84 ~~---~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~ 160 (342)
T 2hrz_A 84 EA---RPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTT 160 (342)
T ss_dssp HT---CCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCC
T ss_pred hc---CCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCC
Confidence 63 3999999999753 2455678999999999999999876 89999999998873
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCccc-Cch------H----HHHHHHhCCCeEEecCCeeee------
Q 043385 213 PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFK-SLG------G----QVELVKEGKPYVMFGDGKLCA------ 275 (405)
Q Consensus 213 ~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g-~~~------~----~~~~~~~g~~~~~~g~g~~~~------ 275 (405)
|.+.|+.+|.++|.+++.++. ..+++++++|++.+|| |.. . ++..+..+.+..+++++....
T Consensus 161 ~~~~Y~~sK~~~e~~~~~~~~-~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (342)
T 2hrz_A 161 PLTSYGTQKAICELLLSDYSR-RGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPR 239 (342)
T ss_dssp CSSHHHHHHHHHHHHHHHHHH-TTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHH
T ss_pred CcchHHHHHHHHHHHHHHHHH-hcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehH
Confidence 567899999999999998876 4689999999999997 532 2 244555677766555543222
Q ss_pred h-------hhccccc---ccceEeccCCCCCCCHHHHHHHHHHHcCCCC--CeeecChHHHHHHHHHHHHHHhhccchhh
Q 043385 276 Y-------CVLSEDK---INQILPIGGPGKALTPLEQGEILFRLLGKEP--KFLKVPIGIMDFAIGVLDFLVKIFPSLED 343 (405)
Q Consensus 276 ~-------~~~~~~~---~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 343 (405)
+ ++..+.. .+++||+++ +.+|+.|+++.+.+.+|.+. .+...|......
T Consensus 240 Dva~~~~~~~~~~~~~~~~~~~~ni~g--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~----------------- 300 (342)
T 2hrz_A 240 SAVGFLIHGAMIDVEKVGPRRNLSMPG--LSATVGEQIEALRKVAGEKAVALIRREPNEMIMR----------------- 300 (342)
T ss_dssp HHHHHHHHHHHSCHHHHCSCCEEECCC--EEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHH-----------------
T ss_pred HHHHHHHHHHhccccccCCccEEEcCC--CCCCHHHHHHHHHHHcCcccccceeeccCcchhh-----------------
Confidence 1 1112221 468999975 67999999999999998753 333334321100
Q ss_pred hhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhhc
Q 043385 344 AAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLRE 392 (405)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~~ 392 (405)
... .....+|.++++. |||+|.+ ++++.+++.++.
T Consensus 301 ------~~~----~~~~~~d~~k~~~-lG~~p~~---~l~e~l~~~~~~ 335 (342)
T 2hrz_A 301 ------MCE----GWAPGFEAKRARE-LGFTAES---SFEEIIQVHIED 335 (342)
T ss_dssp ------HHT----TSCCCBCCHHHHH-TTCCCCS---SHHHHHHHHHHH
T ss_pred ------hhc----ccccccChHHHHH-cCCCCCC---CHHHHHHHHHHH
Confidence 000 0011367888888 9999954 555555555543
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=251.50 Aligned_cols=225 Identities=16% Similarity=0.116 Sum_probs=170.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-----ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-----QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-----~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
||+|||||||||||++++++|+++|++|++++|+...... .....+. ...+++++.+|++|++++.++++++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 77 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNT--ERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV- 77 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccch--HHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-
Confidence 4789999999999999999999999999999998654210 0001111 1247889999999999999999873
Q ss_pred CCccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCC---CEEEEEccccccC--------------CChhH
Q 043385 160 TSIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGA---SHFVLLSAICVQK--------------PLLEF 217 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v---~~~V~~Ss~~~~~--------------~~~~y 217 (405)
++|+||||||.... ++...+++|+.++.+++++|++.++ ++||++||.++|. |.+.|
T Consensus 78 -~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y 156 (372)
T 1db3_A 78 -QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPY 156 (372)
T ss_dssp -CCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHH
T ss_pred -CCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChH
Confidence 47999999997532 3345678999999999999999988 8999999998763 35689
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch----------HHHHHHHhCC-CeEEecCCeeeehhhc-------
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG----------GQVELVKEGK-PYVMFGDGKLCAYCVL------- 279 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------~~~~~~~~g~-~~~~~g~g~~~~~~~~------- 279 (405)
+.+|.++|.+++.++. ..+++++++|+..+|||.. .++..+..|. +...+|++.+.+++++
T Consensus 157 ~~sK~~~e~~~~~~~~-~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a 235 (372)
T 1db3_A 157 AVAKLYAYWITVNYRE-SYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM 235 (372)
T ss_dssp HHHHHHHHHHHHHHHH-HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHH
Confidence 9999999999998876 4689999999999999742 1234445565 3456787776552111
Q ss_pred ----ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCC
Q 043385 280 ----SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPK 315 (405)
Q Consensus 280 ----~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~ 315 (405)
.....+++||++++ +.+|+.|+++.+.+.+|.+.+
T Consensus 236 ~~~~~~~~~~~~~ni~~~-~~~s~~e~~~~i~~~~g~~~~ 274 (372)
T 1db3_A 236 QWMMLQQEQPEDFVIATG-VQYSVRQFVEMAAAQLGIKLR 274 (372)
T ss_dssp HHHTTSSSSCCCEEECCC-CCEEHHHHHHHHHHTTTEEEE
T ss_pred HHHHHhcCCCceEEEcCC-CceeHHHHHHHHHHHhCCCcc
Confidence 11122589999985 899999999999999997654
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-31 Score=247.89 Aligned_cols=248 Identities=19% Similarity=0.195 Sum_probs=187.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|||||||||||++++++|+ +|++|++++|++. ++.+|+.|++++.+++++. ++|+|
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~--~~d~v 58 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL--RPDVI 58 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH--CCSEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc--CCCEE
Confidence 589999999999999999999 8999999999752 2458999999999999862 58999
Q ss_pred EEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC--------------CChhHHHHHHHHHH
Q 043385 166 VSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK--------------PLLEFQRAKLKFEA 226 (405)
Q Consensus 166 v~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~~E~ 226 (405)
||+|+... .++.+.+++|+.++.+++++|++.++ ||||+||.++|. |.+.|+.+|.++|+
T Consensus 59 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 137 (299)
T 1n2s_A 59 VNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEK 137 (299)
T ss_dssp EECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHH
T ss_pred EECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence 99999653 34556889999999999999999987 899999998873 35689999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCch-----HHHHHHHhCCCeEEecCCeeee-----------hhhccc--cc-ccce
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSLG-----GQVELVKEGKPYVMFGDGKLCA-----------YCVLSE--DK-INQI 287 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~~-----~~~~~~~~g~~~~~~g~g~~~~-----------~~~~~~--~~-~~~~ 287 (405)
+++.++ .+++++||+++|||.. .++..+..+.++...|+....+ .++..+ .. .+++
T Consensus 138 ~~~~~~-----~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~ 212 (299)
T 1n2s_A 138 ALQDNC-----PKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGL 212 (299)
T ss_dssp HHHHHC-----SSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEE
T ss_pred HHHHhC-----CCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCce
Confidence 998843 4899999999999853 2455566788777777622211 112222 12 4789
Q ss_pred EeccCCCCCCCHHHHHHHHHHHcCCCC------CeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcc
Q 043385 288 LPIGGPGKALTPLEQGEILFRLLGKEP------KFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLI 361 (405)
Q Consensus 288 y~i~~~g~~~t~~ela~~l~~~~g~~~------~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (405)
||++++ +.+|+.|+++.+.+.+|.+. .+.+++.+. .+. . .. ......
T Consensus 213 ~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~--------------~~~---~--~~-------~~~~~~ 265 (299)
T 1n2s_A 213 YHLVAG-GTTTWHDYAALVFDEARKAGITLALTELNAVPTSA--------------YPT---P--AS-------RPGNSR 265 (299)
T ss_dssp EECCCB-SCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTT--------------SCC---S--SC-------CCSBCC
T ss_pred EEEeCC-CCCCHHHHHHHHHHHhCCCcccccccccccccccc--------------ccC---c--CC-------CCCcee
Confidence 999986 89999999999999998763 333333210 000 0 00 012334
Q ss_pred cCccccccccccCCccchhhHHHHHHHHhhc
Q 043385 362 LDPETGEYSAEKTPSYGKDTLEEFFERVLRE 392 (405)
Q Consensus 362 ~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~~ 392 (405)
+|.++++..|||+|+ ++++.+++.++.
T Consensus 266 ~d~~k~~~~lG~~p~----~~~~~l~~~~~~ 292 (299)
T 1n2s_A 266 LNTEKFQRNFDLILP----QWELGVKRMLTE 292 (299)
T ss_dssp BCCHHHHHHHTCCCC----BHHHHHHHHHHH
T ss_pred eeHHHHHHhcCCCCC----CHHHHHHHHHHH
Confidence 788889889999993 577777766653
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=245.05 Aligned_cols=252 Identities=15% Similarity=0.183 Sum_probs=167.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+|||||||||||++++++|+++|++|++++|+... ++ ++.+|++|++++.+++++. ++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------------~~--~~~~Dl~d~~~~~~~~~~~--~~d~ 63 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------------PK--FEQVNLLDSNAVHHIIHDF--QPHV 63 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH--CCSE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------------CC--eEEecCCCHHHHHHHHHhh--CCCE
Confidence 5799999999999999999999999999999987532 12 6789999999999999862 4899
Q ss_pred EEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-------------CChhHHHHHHHHHH
Q 043385 165 VVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-------------PLLEFQRAKLKFEA 226 (405)
Q Consensus 165 Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-------------~~~~y~~sK~~~E~ 226 (405)
||||||... .++...+++|+.++.+++++|++.++ +|||+||.++|. |.+.|+.+|.++|+
T Consensus 64 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~ 142 (315)
T 2ydy_A 64 IVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEK 142 (315)
T ss_dssp EEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred EEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 999999753 24566889999999999999999887 999999998873 35789999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCchH--------HHHHHH-hCCCeEEecCCeeee-----------hhhccc---cc
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSLGG--------QVELVK-EGKPYVMFGDGKLCA-----------YCVLSE---DK 283 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~~~--------~~~~~~-~g~~~~~~g~g~~~~-----------~~~~~~---~~ 283 (405)
+++.+ +++++++||+.|||+... ++..+. .+.++...++....+ .++..+ ..
T Consensus 143 ~~~~~-----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~ 217 (315)
T 2ydy_A 143 AVLEN-----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPS 217 (315)
T ss_dssp HHHHH-----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHh-----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccC
Confidence 99884 567899999999997532 455566 676665554322111 112222 25
Q ss_pred ccceEeccCCCCCCCHHHHHHHHHHHcCCCCC-eeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhccc
Q 043385 284 INQILPIGGPGKALTPLEQGEILFRLLGKEPK-FLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLIL 362 (405)
Q Consensus 284 ~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (405)
.+++||++++ +.+|+.|+++.+.+.+|.+.. +.++|.. +... ..+ .....+
T Consensus 218 ~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------------~~~~----~~~-------~~~~~~ 269 (315)
T 2ydy_A 218 IKGTFHWSGN-EQMTKYEMACAIADAFNLPSSHLRPITDS----------------PVLG----AQR-------PRNAQL 269 (315)
T ss_dssp CCEEEECCCS-CCBCHHHHHHHHHHHTTCCCTTEEEECSC----------------CCSS----SCC-------CSBCCB
T ss_pred CCCeEEEcCC-CcccHHHHHHHHHHHhCCChhheeccccc----------------cccc----cCC-------Cccccc
Confidence 6789999986 899999999999999998765 5555530 0000 000 012346
Q ss_pred CccccccccccCCccchhhHHHHHHHHhhc
Q 043385 363 DPETGEYSAEKTPSYGKDTLEEFFERVLRE 392 (405)
Q Consensus 363 d~~~~~~~lg~~P~~~~~~l~~~~~~~~~~ 392 (405)
|.++++.. ||.|.+ ++++.+++.++.
T Consensus 270 d~~k~~~~-G~~p~~---~~~~~l~~~~~~ 295 (315)
T 2ydy_A 270 DCSKLETL-GIGQRT---PFRIGIKESLWP 295 (315)
T ss_dssp CCHHHHHT-TCCCCC---CHHHHHHHHHGG
T ss_pred chHHHHhc-CCCCCC---CHHHHHHHHHHH
Confidence 78888887 999854 466777666654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-30 Score=268.70 Aligned_cols=271 Identities=17% Similarity=0.211 Sum_probs=192.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+++|+||||||+||||++|+++|+++|++|++++|...........+..+. ..+++++.+|++|++++.++++.. +
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~--~ 84 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY--K 84 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS--C
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhC--C
Confidence 4567899999999999999999999999999999998654321111111111 247899999999999999999831 3
Q ss_pred ccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC------------------CChhHH
Q 043385 162 IDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK------------------PLLEFQ 218 (405)
Q Consensus 162 ~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~------------------~~~~y~ 218 (405)
+|+|||||+.... ...+.+++|+.++.+++++|++.++++||++||.++|. |.+.|+
T Consensus 85 ~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~ 164 (699)
T 1z45_A 85 IDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG 164 (699)
T ss_dssp CCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH
T ss_pred CCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHH
Confidence 9999999997532 23457899999999999999999999999999998763 246899
Q ss_pred HHHHHHHHHHHHHhhhc-CCceEEEEecCCcccCch-------------HHH---HHHHhC--CCeEEec------CCee
Q 043385 219 RAKLKFEAEMMKVAEED-SGFTYSIVRPTAFFKSLG-------------GQV---ELVKEG--KPYVMFG------DGKL 273 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~~-~gi~~~ilRp~~v~g~~~-------------~~~---~~~~~g--~~~~~~g------~g~~ 273 (405)
.+|.++|++++.++.+. .+++++++||+.+||+.. .++ ..+..+ .++.++| +|.+
T Consensus 165 ~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 244 (699)
T 1z45_A 165 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP 244 (699)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCe
Confidence 99999999999887632 699999999999999731 222 223333 4555565 5655
Q ss_pred ee------hh-------hccc------ccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHH
Q 043385 274 CA------YC-------VLSE------DKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFL 334 (405)
Q Consensus 274 ~~------~~-------~~~~------~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~ 334 (405)
.+ ++ +... ...+++||++++ +.+|+.|+++.+.+.+|.+.++...+..
T Consensus 245 ~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~------------ 311 (699)
T 1z45_A 245 IRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG-KGSTVFEVYHAFCKASGIDLPYKVTGRR------------ 311 (699)
T ss_dssp EECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS-CCEEHHHHHHHHHHHHTCCCCC------------------
T ss_pred eEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCC-CCCcHHHHHHHHHHHhCCCCCceecCCC------------
Confidence 44 11 1111 223579999986 8999999999999999987654322210
Q ss_pred HhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHh
Q 043385 335 VKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVL 390 (405)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~ 390 (405)
.+. .....+|.++++..|||+|.+ ++++.+++.+
T Consensus 312 ------------~~~-------~~~~~~d~~ka~~~LG~~p~~---~l~egl~~~~ 345 (699)
T 1z45_A 312 ------------AGD-------VLNLTAKPDRAKRELKWQTEL---QVEDSCKDLW 345 (699)
T ss_dssp ----------------------CCCCCBCCHHHHHHTCCCCCC---CHHHHHHHHH
T ss_pred ------------CCc-------cccccCCHHHHHHhcCCCCCC---CHHHHHHHHH
Confidence 000 012346888888899999965 3444444433
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-30 Score=248.45 Aligned_cols=224 Identities=15% Similarity=0.095 Sum_probs=170.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC--CCchhHhhh-ccC-CcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG--RNDKEETLN-QLQ-GASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~--~~~~~~~~~-~~~-~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
|+|||||||||||++|+++|+++|++|++++|+..+... ......... ..+ +++++.+|++|++++.++++++ +
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~ 106 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--K 106 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--C
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc--C
Confidence 689999999999999999999999999999998764210 000000000 012 6889999999999999999873 4
Q ss_pred ccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCC-----EEEEEccccccC-------------CChhHH
Q 043385 162 IDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGAS-----HFVLLSAICVQK-------------PLLEFQ 218 (405)
Q Consensus 162 ~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~-----~~V~~Ss~~~~~-------------~~~~y~ 218 (405)
+|+|||||+... .++...+++|+.++.+++++|++.+++ +|||+||.++|. |.+.|+
T Consensus 107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~ 186 (381)
T 1n7h_A 107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYA 186 (381)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHH
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchH
Confidence 699999999754 245567899999999999999988775 999999998763 457899
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch----------HHHHHHHhCCC-eEEecCCeeeehhhc--------
Q 043385 219 RAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG----------GQVELVKEGKP-YVMFGDGKLCAYCVL-------- 279 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------~~~~~~~~g~~-~~~~g~g~~~~~~~~-------- 279 (405)
.+|..+|.+++.++. ..+++++++|+.++|||.. .++..+..+.. ...++++...+.+++
T Consensus 187 ~sK~~~E~~~~~~~~-~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~ 265 (381)
T 1n7h_A 187 ASKCAAHWYTVNYRE-AYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAM 265 (381)
T ss_dssp HHHHHHHHHHHHHHH-HHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHH
Confidence 999999999998876 4689999999999999742 12334445643 445677665541111
Q ss_pred ---ccccccceEeccCCCCCCCHHHHHHHHHHHcCCC
Q 043385 280 ---SEDKINQILPIGGPGKALTPLEQGEILFRLLGKE 313 (405)
Q Consensus 280 ---~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~ 313 (405)
.....+++||++++ +.+|+.|+++.+.+.+|.+
T Consensus 266 ~~~~~~~~~~~~~i~~~-~~~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 266 WLMLQQEKPDDYVVATE-EGHTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp HHHHTSSSCCEEEECCS-CEEEHHHHHHHHHHHTTCC
T ss_pred HHHHhCCCCCeEEeeCC-CCCcHHHHHHHHHHHcCCC
Confidence 11123589999985 8999999999999999975
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=234.73 Aligned_cols=200 Identities=16% Similarity=0.179 Sum_probs=154.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+|||||||||||++++++|+++|++|++++|++++... + ..+++++.+|++|++++.+++++ +|+
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~--~~~~~~~~~Dl~d~~~~~~~~~~----~d~ 70 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-------E--NEHLKVKKADVSSLDEVCEVCKG----ADA 70 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-------C--CTTEEEECCCTTCHHHHHHHHTT----CSE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-------c--cCceEEEEecCCCHHHHHHHhcC----CCE
Confidence 4799999999999999999999999999999999765421 1 15899999999999999999998 999
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-------------CCChhHHHHHHHHHHHHHHH
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ-------------KPLLEFQRAKLKFEAEMMKV 231 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~-------------~~~~~y~~sK~~~E~~~~~~ 231 (405)
|||||+..... .+.+++|+.++.++++++++.+++||||+||.+++ .|.+.|+.+|...|.+++.+
T Consensus 71 vi~~a~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~ 149 (227)
T 3dhn_A 71 VISAFNPGWNN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFL 149 (227)
T ss_dssp EEECCCC-------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTG
T ss_pred EEEeCcCCCCC-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999876433 34788999999999999999999999999999875 24678999999999988888
Q ss_pred hhhcCCceEEEEecCCcccCchHHHHHHHhCCCeE-EecCCeeee----------hhhcccccccceEeccCCCCCCCHH
Q 043385 232 AEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYV-MFGDGKLCA----------YCVLSEDKINQILPIGGPGKALTPL 300 (405)
Q Consensus 232 ~~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~-~~g~g~~~~----------~~~~~~~~~~~~y~i~~~g~~~t~~ 300 (405)
+. ..+++++++||+++|||....-. ...+.... ..+++.... .++..+...+++|++++| ++.++.
T Consensus 150 ~~-~~~~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~-~~~~~~ 226 (227)
T 3dhn_A 150 MK-EKEIDWVFFSPAADMRPGVRTGR-YRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTIGYL-EHHHHH 226 (227)
T ss_dssp GG-CCSSEEEEEECCSEEESCCCCCC-CEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCCCCSEEEEEECC-SCCC--
T ss_pred hh-ccCccEEEEeCCcccCCCccccc-eeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCccccCcEEEEEee-hhcccC
Confidence 75 57999999999999998642100 01111111 223331111 344566778999999998 888875
Q ss_pred H
Q 043385 301 E 301 (405)
Q Consensus 301 e 301 (405)
+
T Consensus 227 ~ 227 (227)
T 3dhn_A 227 H 227 (227)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=243.95 Aligned_cols=221 Identities=19% Similarity=0.166 Sum_probs=170.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
+|+||||||||+||++++++|+++| ++|++++|++.+.. ...+.. .+++++.+|++|++++.+++++ +|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~-----~~~l~~-~~~~~~~~D~~d~~~l~~~~~~----~d 74 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA-----AKELRL-QGAEVVQGDQDDQVIMELALNG----AY 74 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH-----HHHHHH-TTCEEEECCTTCHHHHHHHHTT----CS
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH-----HHHHHH-CCCEEEEecCCCHHHHHHHHhc----CC
Confidence 4789999999999999999999998 99999999876531 011222 4789999999999999999998 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-----CChhHHHHHHHHHHHHHHHhhhcCCc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-----PLLEFQRAKLKFEAEMMKVAEEDSGF 238 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-----~~~~y~~sK~~~E~~~~~~~~~~~gi 238 (405)
+|||+++.... ...+.|+.++++++++|++.|++|||++|+.+++. +..+|+.+|..+|++++. .|+
T Consensus 75 ~vi~~a~~~~~---~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-----~gi 146 (299)
T 2wm3_A 75 ATFIVTNYWES---CSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRD-----IGV 146 (299)
T ss_dssp EEEECCCHHHH---TCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHH-----HTC
T ss_pred EEEEeCCCCcc---ccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHH-----CCC
Confidence 99999985321 12457889999999999999999999988877652 257899999999999876 689
Q ss_pred eEEEEecCCcccCchH-HHHH-HHhCCCeE-Ee--cCCeeee-----------hhhccc-ccccceEeccCCCCCCCHHH
Q 043385 239 TYSIVRPTAFFKSLGG-QVEL-VKEGKPYV-MF--GDGKLCA-----------YCVLSE-DKINQILPIGGPGKALTPLE 301 (405)
Q Consensus 239 ~~~ilRp~~v~g~~~~-~~~~-~~~g~~~~-~~--g~g~~~~-----------~~~~~~-~~~~~~y~i~~~g~~~t~~e 301 (405)
++++|||+++||++.. ++.. ...|.... .. +++...+ .++..+ ...+++|++++ +.+|+.|
T Consensus 147 ~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g--~~~s~~e 224 (299)
T 2wm3_A 147 PMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST--CRHTAEE 224 (299)
T ss_dssp CEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS--EEECHHH
T ss_pred CEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee--ccCCHHH
Confidence 9999999999998643 2211 12332221 12 2222222 122222 24678999987 5799999
Q ss_pred HHHHHHHHcCCCCCeeecChHHHH
Q 043385 302 QGEILFRLLGKEPKFLKVPIGIMD 325 (405)
Q Consensus 302 la~~l~~~~g~~~~~~~~p~~~~~ 325 (405)
+++.+.+.+|+++++.++|.+.+.
T Consensus 225 ~~~~~~~~~g~~~~~~~~~~~~~~ 248 (299)
T 2wm3_A 225 YAALLTKHTRKVVHDAKMTPEDYE 248 (299)
T ss_dssp HHHHHHHHHSSCEEECCCCTHHHH
T ss_pred HHHHHHHHHCCCceeEecCHHHHH
Confidence 999999999999888899988765
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=246.98 Aligned_cols=268 Identities=16% Similarity=0.177 Sum_probs=190.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh--ccCCcEEE-EcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN--QLQGASVC-FSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~--~~~~v~~~-~~Dl~d~~~l~~~~~~~~ 159 (405)
+++|+||||||+||||++++++|+++|++|++++|+..+..... ..+. ...+++++ .+|++|++.+.+++++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-- 83 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ---KRWDAKYPGRFETAVVEDMLKQGAYDEVIKG-- 83 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHHHHHSTTTEEEEECSCTTSTTTTTTTTTT--
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHH---HHhhccCCCceEEEEecCCcChHHHHHHHcC--
Confidence 56789999999999999999999999999999999865321000 1110 01468888 7999999999988887
Q ss_pred CCccEEEEcccccC--CCCcchhHhHHHHHHHHHHHHHh-cCCCEEEEEccccccC------------------------
Q 043385 160 TSIDVVVSCLASRS--GGVKDSWKIDYEANRNSLVAGRN-CGASHFVLLSAICVQK------------------------ 212 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~~-~~v~~~V~~Ss~~~~~------------------------ 212 (405)
+|+|||||+... .++.+.+++|+.++.+++++|++ .++++|||+||.++|.
T Consensus 84 --~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 161 (342)
T 1y1p_A 84 --AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKA 161 (342)
T ss_dssp --CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHH
T ss_pred --CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhh
Confidence 999999999754 24556889999999999999985 6789999999998761
Q ss_pred ----------CChhHHHHHHHHHHHHHHHhhh-cCCceEEEEecCCcccCch----------HHHHHHHhCCCeEEecCC
Q 043385 213 ----------PLLEFQRAKLKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSLG----------GQVELVKEGKPYVMFGDG 271 (405)
Q Consensus 213 ----------~~~~y~~sK~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~~----------~~~~~~~~g~~~~~~g~g 271 (405)
|.+.|+.+|.++|.+++.++.+ ..+++++++||+++|||.. .++..+..+.+..+++++
T Consensus 162 ~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1y1p_A 162 KTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM 241 (342)
T ss_dssp HHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC
Confidence 1257999999999999988763 2389999999999999752 234566667766545543
Q ss_pred ee---ee---------hhhcccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhcc
Q 043385 272 KL---CA---------YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFP 339 (405)
Q Consensus 272 ~~---~~---------~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 339 (405)
.. .. .++..+...++.|...+ ..+|+.|+++.+.+.+|.+ .+ +.+. +
T Consensus 242 ~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g--~~~s~~e~~~~i~~~~~~~-~~-~~~~-----------------~ 300 (342)
T 1y1p_A 242 PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTA--GTFDWNTVLATFRKLYPSK-TF-PADF-----------------P 300 (342)
T ss_dssp CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECC--EEECHHHHHHHHHHHCTTS-CC-CCCC-----------------C
T ss_pred CcCCEeEHHHHHHHHHHHHcCcccCCceEEEeC--CCCCHHHHHHHHHHHCCCc-cC-CCCC-----------------C
Confidence 11 11 12222333455554443 6799999999999999874 11 1110 0
Q ss_pred chhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhhc
Q 043385 340 SLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLRE 392 (405)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~~ 392 (405)
. .+ .....+|.++++..|||.+..+..++++.+++.++.
T Consensus 301 ~------~~--------~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~ 339 (342)
T 1y1p_A 301 D------QG--------QDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339 (342)
T ss_dssp C------CC--------CCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred c------cc--------cccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHH
Confidence 0 00 001235777888888873222246788888887754
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=243.18 Aligned_cols=218 Identities=19% Similarity=0.198 Sum_probs=174.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSR-GF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+++|+||||||||+||++++++|+++ |+ +|++++|++.+... ....+. ..+++++.+|++|.+.+.+++++
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~---~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~--- 91 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSE---MAMEFN-DPRMRFFIGDVRDLERLNYALEG--- 91 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHH---HHHHHC-CTTEEEEECCTTCHHHHHHHTTT---
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHH---HHHHhc-CCCEEEEECCCCCHHHHHHHHhc---
Confidence 56789999999999999999999999 97 99999998654310 001111 24789999999999999999987
Q ss_pred CccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhhh-
Q 043385 161 SIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEE- 234 (405)
Q Consensus 161 ~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~- 234 (405)
+|+|||+||... ..+.+.+++|+.|+.+++++|.+.++++||++||..++.|.+.|+.+|..+|.+++.++.+
T Consensus 92 -~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 170 (344)
T 2gn4_A 92 -VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPINLYGATKLCSDKLFVSANNFK 170 (344)
T ss_dssp -CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCCSHHHHHHHHHHHHHHHGGGCC
T ss_pred -CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 999999999753 2345688999999999999999999999999999999999999999999999999988753
Q ss_pred -cCCceEEEEecCCcccCchH----HHHHHHhCC-CeEEecCCeeee------hh------hcccccccceEeccCCCCC
Q 043385 235 -DSGFTYSIVRPTAFFKSLGG----QVELVKEGK-PYVMFGDGKLCA------YC------VLSEDKINQILPIGGPGKA 296 (405)
Q Consensus 235 -~~gi~~~ilRp~~v~g~~~~----~~~~~~~g~-~~~~~g~g~~~~------~~------~~~~~~~~~~y~i~~~g~~ 296 (405)
..+++++++|||++||+... +...+..|. ++.+. ++...+ ++ +......+++|++.++ .
T Consensus 171 ~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~~g~~~~~~~~--~ 247 (344)
T 2gn4_A 171 GSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIP--S 247 (344)
T ss_dssp CSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCCSSCEEEECCC--E
T ss_pred CCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhccCCCEEecCCC--c
Confidence 36899999999999998643 455666777 66654 554443 11 1122345789999874 6
Q ss_pred CCHHHHHHHHHHHcC
Q 043385 297 LTPLEQGEILFRLLG 311 (405)
Q Consensus 297 ~t~~ela~~l~~~~g 311 (405)
+++.|+++.+.+.++
T Consensus 248 ~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 248 MKMTDLAKALAPNTP 262 (344)
T ss_dssp EEHHHHHHHHCTTCC
T ss_pred EEHHHHHHHHHHhCC
Confidence 999999999987553
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-30 Score=245.44 Aligned_cols=216 Identities=14% Similarity=0.167 Sum_probs=155.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc----CCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL----QGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~----~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++++||||||+||||++|+++|+++|++|++++|+.+.... ...+... .+++++.+|++|++++.+++++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 77 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKK----VKHLLDLPKAETHLTLWKADLADEGSFDEAIKG-- 77 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHH----HHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTT--
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHH----HHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcC--
Confidence 56899999999999999999999999999999998753210 0111111 2578999999999999999988
Q ss_pred CCccEEEEcccccCCC---C-cchhHhHHHHHHHHHHHHHhcC-CCEEEEEcccccc-C---------------------
Q 043385 160 TSIDVVVSCLASRSGG---V-KDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQ-K--------------------- 212 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~---~-~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~-~--------------------- 212 (405)
+|+|||+|+..... . .+.+++|+.|+.+++++|++.+ ++||||+||.+++ .
T Consensus 78 --~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~ 155 (337)
T 2c29_D 78 --CTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRA 155 (337)
T ss_dssp --CSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHH
T ss_pred --CCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcc
Confidence 99999999865321 1 2378899999999999999887 8999999998732 1
Q ss_pred ---CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----HHHHHH---HhCCCeEEecCCee---ee--h
Q 043385 213 ---PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----GQVELV---KEGKPYVMFGDGKL---CA--Y 276 (405)
Q Consensus 213 ---~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----~~~~~~---~~g~~~~~~g~g~~---~~--~ 276 (405)
+...|+.+|..+|.++..++. ..|++++++||+++|||.. ..+... ..|... .++.+.. .. +
T Consensus 156 ~~~~~~~Y~~sK~~~E~~~~~~~~-~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~i~v~D 233 (337)
T 2c29_D 156 KKMTAWMYFVSKTLAEQAAWKYAK-ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSIIRQGQFVHLDD 233 (337)
T ss_dssp HCCTTHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHHTEEEEEEHHH
T ss_pred cCCccchHHHHHHHHHHHHHHHHH-HcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-cccccCCCCEEEHHH
Confidence 234699999999999988764 3699999999999999852 122111 233322 1111111 11 1
Q ss_pred h------hcccccccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 277 C------VLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 277 ~------~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
+ +......++.|++++ ..+|+.|+++.+.+.++
T Consensus 234 va~a~~~~~~~~~~~~~~~~~~--~~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 234 LCNAHIYLFENPKAEGRYICSS--HDCIILDLAKMLREKYP 272 (337)
T ss_dssp HHHHHHHHHHCTTCCEEEEECC--EEEEHHHHHHHHHHHCT
T ss_pred HHHHHHHHhcCcccCceEEEeC--CCCCHHHHHHHHHHHCC
Confidence 1 112223356787765 46899999999999874
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=254.77 Aligned_cols=228 Identities=14% Similarity=0.151 Sum_probs=167.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh----------hccCCcEEEEcCCCCHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL----------NQLQGASVCFSDVTNLESL 151 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~----------~~~~~v~~~~~Dl~d~~~l 151 (405)
...+|+|||||||||||++|+++|+++|++|++++|++.......+....+ ....+++++.+|++|++.+
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 345689999999999999999999999999999999986321111110111 1125899999999998887
Q ss_pred HHHHHhhCCCccEEEEcccccC--CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc-------------------
Q 043385 152 EKSLENLGTSIDVVVSCLASRS--GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV------------------- 210 (405)
Q Consensus 152 ~~~~~~~~~~~d~Vv~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~------------------- 210 (405)
. .+. ++|+|||||+... .++...+++|+.++.+++++|++ ++++|||+||.++
T Consensus 146 ~-~~~----~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~ 219 (427)
T 4f6c_A 146 V-LPE----NMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVY 219 (427)
T ss_dssp C-CSS----CCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGGGSEECSSCSCCEECTTCSC
T ss_pred C-CcC----CCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHhCCCccCCCCCccccccccc
Confidence 7 444 4999999999764 45677899999999999999999 8899999999988
Q ss_pred --cCCChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch--------------HHHHHHHhCCCeEEecCCeee
Q 043385 211 --QKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG--------------GQVELVKEGKPYVMFGDGKLC 274 (405)
Q Consensus 211 --~~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~--------------~~~~~~~~g~~~~~~g~g~~~ 274 (405)
..+.+.|+.+|..+|.+++.++. .|++++++|||+|||+.. .++..+..+.+++. +.++..
T Consensus 220 ~~~~~~~~Y~~sK~~~E~~~~~~~~--~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 296 (427)
T 4f6c_A 220 KGQLLTSPYTRSKFYSELKVLEAVN--NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMP 296 (427)
T ss_dssp SSCCCCSHHHHHHHHHHHHHHHHHH--TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCE
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHH--cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccce
Confidence 23678999999999999999875 799999999999999742 23444555555443 222332
Q ss_pred e-------------hhhcccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHH
Q 043385 275 A-------------YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGI 323 (405)
Q Consensus 275 ~-------------~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~ 323 (405)
+ .++..+. .+++||++++ +.+++.|+++.+.+ +| .+.++.+.|.
T Consensus 297 ~~~v~v~DvA~ai~~~~~~~~-~g~~~~l~~~-~~~s~~el~~~i~~-~g--~~~~~~~~~~ 353 (427)
T 4f6c_A 297 VDFSFVDTTARQIVALAQVNT-PQIIYHVLSP-NKMPVKSLLECVKR-KE--IELVSDESFN 353 (427)
T ss_dssp ECCEEHHHHHHHHHHHTTSCC-CCSEEEESCS-CCEEHHHHHHHHHS-SC--CEEECHHHHH
T ss_pred EEEeeHHHHHHHHHHHHcCCC-CCCEEEecCC-CCCcHHHHHHHHHH-cC--CcccCHHHHH
Confidence 2 1222233 7899999986 89999999999998 66 4444444443
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.5e-29 Score=248.47 Aligned_cols=242 Identities=14% Similarity=0.159 Sum_probs=179.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhC---CCeEEEEecCCCCcCCCCchhHhhh-------------ccCCcEEEEcC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSR---GFNVIAIAREKSGIRGRNDKEETLN-------------QLQGASVCFSD 144 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~l~r~~~~~~~~~~~~~~~~-------------~~~~v~~~~~D 144 (405)
...++|+|||||||||||++|+++|+++ |++|++++|++.......+....+. ...+++++.+|
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 3456899999999999999999999999 8999999998764311111001110 12589999999
Q ss_pred CC------CHHHHHHHHHhhCCCccEEEEcccccC-CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCC---
Q 043385 145 VT------NLESLEKSLENLGTSIDVVVSCLASRS-GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPL--- 214 (405)
Q Consensus 145 l~------d~~~l~~~~~~~~~~~d~Vv~~a~~~~-~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~--- 214 (405)
++ |.+.+.+++++ +|+|||||+... .++.+.+++|+.++.+++++|++.++++|||+||.++|...
T Consensus 149 l~~~~~gld~~~~~~~~~~----~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~ 224 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRRLAET----VDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPS 224 (478)
T ss_dssp TTSGGGGCCHHHHHHHHHH----CCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTT
T ss_pred CCCcccCCCHHHHHHHHcC----CCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCC
Confidence 98 66789999998 999999999754 34557899999999999999999999999999999887321
Q ss_pred ----------------------hhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch--------HHH----HHHH
Q 043385 215 ----------------------LEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG--------GQV----ELVK 260 (405)
Q Consensus 215 ----------------------~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~--------~~~----~~~~ 260 (405)
+.|+.+|..+|.+++.++. ..|++++++|||+|||+.. .++ ....
T Consensus 225 ~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~ 303 (478)
T 4dqv_A 225 AFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREAND-LCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLM 303 (478)
T ss_dssp TCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHH-HHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHH
T ss_pred CcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHH-HhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHH
Confidence 2399999999999999876 4599999999999999621 122 2222
Q ss_pred hCCCeE--Ee---cCC---eeee-------------hhhcc----cccccceEeccCCCCC--CCHHHHHHHHHHHcCCC
Q 043385 261 EGKPYV--MF---GDG---KLCA-------------YCVLS----EDKINQILPIGGPGKA--LTPLEQGEILFRLLGKE 313 (405)
Q Consensus 261 ~g~~~~--~~---g~g---~~~~-------------~~~~~----~~~~~~~y~i~~~g~~--~t~~ela~~l~~~~g~~ 313 (405)
..+..+ +. ++| ...+ .++.. +...+++||++++ +. +|+.|+++.+.+. |.+
T Consensus 304 ~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~-~~~~~s~~el~~~l~~~-g~~ 381 (478)
T 4dqv_A 304 ATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNP-HDDGIGLDEYVDWLIEA-GYP 381 (478)
T ss_dssp HHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCC-CCSSCSHHHHHHHHHHT-TCS
T ss_pred HcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCC-CCCCcCHHHHHHHHHHc-CCC
Confidence 222221 11 122 1221 11122 4466889999987 67 9999999999996 877
Q ss_pred CCee-ecChHHHHHHHH
Q 043385 314 PKFL-KVPIGIMDFAIG 329 (405)
Q Consensus 314 ~~~~-~~p~~~~~~~~~ 329 (405)
.+.+ ++|.|+......
T Consensus 382 ~~~i~~~~~w~~~l~~~ 398 (478)
T 4dqv_A 382 IRRIDDFAEWLQRFEAS 398 (478)
T ss_dssp CEEESSHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHH
Confidence 7655 678887665543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=237.84 Aligned_cols=217 Identities=16% Similarity=0.169 Sum_probs=153.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEec-CCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAR-EKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+|+|||||||||||++++++|+++|++|++++| +++..... .....+.. ..+++++.+|++|++++.+++++ +
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~ 75 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNPDSFAAAIEG----C 75 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCGGGGHHHHTT----C
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCHHHHHHHHcC----C
Confidence 478999999999999999999999999999998 55321110 00011110 12467889999999999999998 9
Q ss_pred cEEEEcccccCC---C-CcchhHhHHHHHHHHHHHHHhc-CCCEEEEEccccccC------------------------C
Q 043385 163 DVVVSCLASRSG---G-VKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQK------------------------P 213 (405)
Q Consensus 163 d~Vv~~a~~~~~---~-~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~~------------------------~ 213 (405)
|+|||+|+.... + ..+.+++|+.|+.+++++|++. +++||||+||.+++. |
T Consensus 76 d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p 155 (322)
T 2p4h_X 76 VGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKP 155 (322)
T ss_dssp SEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCC
T ss_pred CEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCc
Confidence 999999975421 1 2348899999999999999998 799999999987431 1
Q ss_pred Ch-hHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----HHHHH---HHhCCCeEEecCCe--eee-------
Q 043385 214 LL-EFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----GQVEL---VKEGKPYVMFGDGK--LCA------- 275 (405)
Q Consensus 214 ~~-~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----~~~~~---~~~g~~~~~~g~g~--~~~------- 275 (405)
.. .|+.+|..+|.++.+++. ..|++++++||+++|||.. ..+.. ...|.... ++.+. ...
T Consensus 156 ~~~~Y~~sK~~~e~~~~~~~~-~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~i~v~Dva~a 233 (322)
T 2p4h_X 156 FGWNYAVSKTLAEKAVLEFGE-QNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQ-IGVTRFHMVHVDDVARA 233 (322)
T ss_dssp TTHHHHHHHHHHHHHHHHHHH-HTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGG-CCEEEEEEEEHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHH-hcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCcc-CcCCCcCEEEHHHHHHH
Confidence 11 699999999999988765 4799999999999999853 12221 13344322 22211 111
Q ss_pred --hhhcccccccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 276 --YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 276 --~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
.++..+. ..+.||++ + +.+|+.|+++.+.+..+
T Consensus 234 ~~~~~~~~~-~~g~~~~~-~-~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 234 HIYLLENSV-PGGRYNCS-P-FIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp HHHHHHSCC-CCEEEECC-C-EEEEHHHHHHHHHHHCT
T ss_pred HHHHhhCcC-CCCCEEEc-C-CCCCHHHHHHHHHHhCC
Confidence 1222222 33459954 3 78999999999998764
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=239.37 Aligned_cols=223 Identities=21% Similarity=0.284 Sum_probs=167.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC-CCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG-RNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
+|+|+||||||+||++++++|+++|++|++++|+...... .......+. ..+++++.+|++|++++.+++++ +|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~----~d 78 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALKQ----VD 78 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHTT----CS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH-hCCeEEEeCCCCCHHHHHHHHhC----CC
Confidence 5789999999999999999999999999999998653210 000011111 25899999999999999999998 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcC-CCEEEEEcccccc--------CC-ChhHHHHHHHHHHHHHHHhh
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQ--------KP-LLEFQRAKLKFEAEMMKVAE 233 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~--------~~-~~~y~~sK~~~E~~~~~~~~ 233 (405)
+|||+++..... .|+.++++++++|+++| ++|||+ |+.+.. .| ...| .+|..+|+++++
T Consensus 79 ~vi~~a~~~~~~------~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~--- 147 (313)
T 1qyd_A 79 VVISALAGGVLS------HHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIEA--- 147 (313)
T ss_dssp EEEECCCCSSSS------TTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHH---
T ss_pred EEEECCccccch------hhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHHh---
Confidence 999999875422 37788999999999999 999996 655422 13 3457 999999999876
Q ss_pred hcCCceEEEEecCCcccCchHHH-HH----HHhCCCeEEecCCeeee-------------hhhcccccccceEeccCCCC
Q 043385 234 EDSGFTYSIVRPTAFFKSLGGQV-EL----VKEGKPYVMFGDGKLCA-------------YCVLSEDKINQILPIGGPGK 295 (405)
Q Consensus 234 ~~~gi~~~ilRp~~v~g~~~~~~-~~----~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y~i~~~g~ 295 (405)
.+++++++||+.+++++...+ .. ...++.+.++++++... .++..+...+++|++.++|+
T Consensus 148 --~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~ 225 (313)
T 1qyd_A 148 --ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMN 225 (313)
T ss_dssp --TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGG
T ss_pred --cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCC
Confidence 799999999999998643211 11 12233445566665443 22333445578888887656
Q ss_pred CCCHHHHHHHHHHHcCCCCCeeecChHHHH
Q 043385 296 ALTPLEQGEILFRLLGKEPKFLKVPIGIMD 325 (405)
Q Consensus 296 ~~t~~ela~~l~~~~g~~~~~~~~p~~~~~ 325 (405)
.+|+.|+++.+.+.+|++.++.++|.+.+.
T Consensus 226 ~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 255 (313)
T 1qyd_A 226 ILSQKEVIQIWERLSEQNLDKIYISSQDFL 255 (313)
T ss_dssp EEEHHHHHHHHHHHHTCCCEECCBCSHHHH
T ss_pred ccCHHHHHHHHHHhcCCCCceEECCHHHHH
Confidence 899999999999999999988888876544
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=233.69 Aligned_cols=216 Identities=20% Similarity=0.262 Sum_probs=165.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+++||||||||+||++++++|+++|++|++++|++.... .....+.. .+++++.+|++|++++.+++++ +|+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~---~~~~~l~~-~~v~~v~~Dl~d~~~l~~a~~~----~d~ 82 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKT---TLLDEFQS-LGAIIVKGELDEHEKLVELMKK----VDV 82 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCH---HHHHHHHH-TTCEEEECCTTCHHHHHHHHTT----CSE
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchh---hHHHHhhc-CCCEEEEecCCCHHHHHHHHcC----CCE
Confidence 358999999999999999999999999999999875211 11111222 4799999999999999999998 999
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcC-CCEEEEEcccccc----C---C-ChhHHHHHHHHHHHHHHHhhhc
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQ----K---P-LLEFQRAKLKFEAEMMKVAEED 235 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~----~---~-~~~y~~sK~~~E~~~~~~~~~~ 235 (405)
|||+++.. ++.++++++++|+++| ++|||+ |+.+.. . | ...| .+|..+|+++++
T Consensus 83 vi~~a~~~----------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~----- 145 (318)
T 2r6j_A 83 VISALAFP----------QILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPFEALI-ERKRMIRRAIEE----- 145 (318)
T ss_dssp EEECCCGG----------GSTTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHHHHHHHHHH-----
T ss_pred EEECCchh----------hhHHHHHHHHHHHhcCCCCEEEe-eccccCcccccCCCCcchhH-HHHHHHHHHHHh-----
Confidence 99999853 2456899999999998 999985 655432 1 1 2347 999999999876
Q ss_pred CCceEEEEecCCcccCchH-HHHHHHhCCCeEEecCCeeee-------------hhhcccccccceEeccCCCCCCCHHH
Q 043385 236 SGFTYSIVRPTAFFKSLGG-QVELVKEGKPYVMFGDGKLCA-------------YCVLSEDKINQILPIGGPGKALTPLE 301 (405)
Q Consensus 236 ~gi~~~ilRp~~v~g~~~~-~~~~~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y~i~~~g~~~t~~e 301 (405)
.+++++++||+.+++++.. +......++.+.++++++... .++..+...+++|++.++|+.+|+.|
T Consensus 146 ~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e 225 (318)
T 2r6j_A 146 ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLE 225 (318)
T ss_dssp TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHH
T ss_pred cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHH
Confidence 7899999999999886432 222222345566677776543 22333444578888876557899999
Q ss_pred HHHHHHHHcCCCCCeeecChHHHH
Q 043385 302 QGEILFRLLGKEPKFLKVPIGIMD 325 (405)
Q Consensus 302 la~~l~~~~g~~~~~~~~p~~~~~ 325 (405)
+++.+.+.+|++.++..+|.+.+.
T Consensus 226 ~~~~~~~~~g~~~~~~~~~~~~~~ 249 (318)
T 2r6j_A 226 LISRWEKKIGKKFKKIHVPEEEIV 249 (318)
T ss_dssp HHHHHHHHHTCCCEEEEECHHHHH
T ss_pred HHHHHHHHhCCCCceeecCHHHHH
Confidence 999999999999999999988654
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=230.91 Aligned_cols=211 Identities=19% Similarity=0.213 Sum_probs=154.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|||||||||||||++|+++|+++||+|++++|++.+. . +..| +...+.+++ +|+|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~--------------~---~~~~----~~~~~~l~~----~d~v 55 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG--------------R---ITWD----ELAASGLPS----CDAA 55 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------E---EEHH----HHHHHCCCS----CSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC--------------e---eecc----hhhHhhccC----CCEE
Confidence 7899999999999999999999999999999986531 1 1222 222333445 9999
Q ss_pred EEcccccCC----CC-----cchhHhHHHHHHHHHHHHHhcCCC--EEEEEccccccC--------------CChhHHHH
Q 043385 166 VSCLASRSG----GV-----KDSWKIDYEANRNSLVAGRNCGAS--HFVLLSAICVQK--------------PLLEFQRA 220 (405)
Q Consensus 166 v~~a~~~~~----~~-----~~~~~~n~~g~~~ll~aa~~~~v~--~~V~~Ss~~~~~--------------~~~~y~~s 220 (405)
||+|+.... .+ ..+++.|+.+|+++++++++.+++ +||+.||.++|. +.+.|+..
T Consensus 56 ihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~ 135 (298)
T 4b4o_A 56 VNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNL 135 (298)
T ss_dssp EECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHH
T ss_pred EEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHH
Confidence 999985321 11 236788999999999999988754 589999998872 23456677
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEecCCcccCchHHH----HHHHhCCCeEEecCCeeeehhh------------cccccc
Q 043385 221 KLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQV----ELVKEGKPYVMFGDGKLCAYCV------------LSEDKI 284 (405)
Q Consensus 221 K~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~~~----~~~~~g~~~~~~g~g~~~~~~~------------~~~~~~ 284 (405)
|...|.... .. ..+++++++||+.||||.++.+ .....+ ....+|+|.+.+.++ ...+..
T Consensus 136 ~~~~e~~~~--~~-~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~-~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~ 211 (298)
T 4b4o_A 136 VTKWEAAAR--LP-GDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLG-LGGPIGSGHQFFPWIHIGDLAGILTHALEANHV 211 (298)
T ss_dssp HHHHHHHHC--CS-SSSSEEEEEEECEEECTTSHHHHHHHHHHHTT-CCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHH--hh-ccCCceeeeeeeeEEcCCCCchhHHHHHHhcC-CcceecccCceeecCcHHHHHHHHHHHHhCCCC
Confidence 776665432 11 4799999999999999976543 233334 344578888776221 223345
Q ss_pred cceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHH
Q 043385 285 NQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFA 327 (405)
Q Consensus 285 ~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~ 327 (405)
+++||++++ +++|+.|+++.+++.+|+|.. .++|.++++..
T Consensus 212 ~g~yn~~~~-~~~t~~e~~~~ia~~lgrp~~-~pvP~~~~~~~ 252 (298)
T 4b4o_A 212 HGVLNGVAP-SSATNAEFAQTFGAALGRRAF-IPLPSAVVQAV 252 (298)
T ss_dssp CEEEEESCS-CCCBHHHHHHHHHHHHTCCCC-CCBCHHHHHHH
T ss_pred CCeEEEECC-CccCHHHHHHHHHHHhCcCCc-ccCCHHHHHHH
Confidence 679999997 899999999999999998754 58898877754
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=226.85 Aligned_cols=198 Identities=20% Similarity=0.298 Sum_probs=155.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCc-EEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGA-SVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..+++|+||||||||+||++++++|+++|++|++++|++++. ..+.. .++ +++.+|++ +.+.+++++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~-------~~~~~-~~~~~~~~~Dl~--~~~~~~~~~-- 84 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG-------PELRE-RGASDIVVANLE--EDFSHAFAS-- 84 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-------HHHHH-TTCSEEEECCTT--SCCGGGGTT--
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH-------HHHHh-CCCceEEEcccH--HHHHHHHcC--
Confidence 356789999999999999999999999999999999987654 22332 378 99999999 667777777
Q ss_pred CCccEEEEcccccC-CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC------ChhHHHHHHHHHHHHHHHh
Q 043385 160 TSIDVVVSCLASRS-GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP------LLEFQRAKLKFEAEMMKVA 232 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~-~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~------~~~y~~sK~~~E~~~~~~~ 232 (405)
+|+||||||... .++...+++|+.++.+++++|++.+++|||++||.+.+.+ ...|+.+|.++|.+++.
T Consensus 85 --~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~-- 160 (236)
T 3e8x_A 85 --IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKR-- 160 (236)
T ss_dssp --CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHHH--
T ss_pred --CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHHH--
Confidence 999999999764 4566788999999999999999999999999999887743 47899999999999874
Q ss_pred hhcCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeee-------------hhhcccccccceEeccCCCCCCCH
Q 043385 233 EEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCA-------------YCVLSEDKINQILPIGGPGKALTP 299 (405)
Q Consensus 233 ~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y~i~~~g~~~t~ 299 (405)
.++++++||||++||+.. ...+...+++.... .++..+...+++|+++++ .+++
T Consensus 161 ---~gi~~~~lrpg~v~~~~~--------~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~--~~~~ 227 (236)
T 3e8x_A 161 ---SSLDYTIVRPGPLSNEES--------TGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNG--DTPI 227 (236)
T ss_dssp ---SSSEEEEEEECSEECSCC--------CSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEEC--SEEH
T ss_pred ---CCCCEEEEeCCcccCCCC--------CCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCC--CcCH
Confidence 899999999999999852 12222223322211 233344467889999873 6999
Q ss_pred HHHHHHHH
Q 043385 300 LEQGEILF 307 (405)
Q Consensus 300 ~ela~~l~ 307 (405)
.|+++.++
T Consensus 228 ~e~~~~i~ 235 (236)
T 3e8x_A 228 AKVVEQLG 235 (236)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHhc
Confidence 99988764
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=233.55 Aligned_cols=220 Identities=19% Similarity=0.220 Sum_probs=165.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-CCcCC-CCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK-SGIRG-RNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++|+|+||||||+||++++++|+++|++|++++|++ ..... .......+. ..+++++.+|++|++++.+++++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~-~~~v~~v~~D~~d~~~l~~a~~~---- 77 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR-SMGVTIIEGEMEEHEKMVSVLKQ---- 77 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHTT----
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh-cCCcEEEEecCCCHHHHHHHHcC----
Confidence 357899999999999999999999999999999986 32100 000011112 25799999999999999999998
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcC-CCEEEEEcccccc----C---C-ChhHHHHHHHHHHHHHHHh
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQ----K---P-LLEFQRAKLKFEAEMMKVA 232 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~----~---~-~~~y~~sK~~~E~~~~~~~ 232 (405)
+|+||||++... +.++++++++|++.| ++|||+ |+.+.. . | ...| .+|..+|++++.
T Consensus 78 ~d~vi~~a~~~~----------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-- 143 (321)
T 3c1o_A 78 VDIVISALPFPM----------ISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEA-- 143 (321)
T ss_dssp CSEEEECCCGGG----------SGGGHHHHHHHHHHCCCCEEEC-SCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH--
T ss_pred CCEEEECCCccc----------hhhHHHHHHHHHHhCCccEEec-cccccCccccccCCCcchHH-HHHHHHHHHHHH--
Confidence 999999998542 567889999999999 999983 554421 1 1 3468 999999999876
Q ss_pred hhcCCceEEEEecCCcccCchHHHHH----HHhCCCeEEecCCeeee-------------hhhcccccccceEeccCCCC
Q 043385 233 EEDSGFTYSIVRPTAFFKSLGGQVEL----VKEGKPYVMFGDGKLCA-------------YCVLSEDKINQILPIGGPGK 295 (405)
Q Consensus 233 ~~~~gi~~~ilRp~~v~g~~~~~~~~----~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y~i~~~g~ 295 (405)
.++++++|||+.+++++...+.. ...++.+..+++++... .++..+...+++|++.++|+
T Consensus 144 ---~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~ 220 (321)
T 3c1o_A 144 ---AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKN 220 (321)
T ss_dssp ---HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGG
T ss_pred ---cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCC
Confidence 68999999999999875432211 12344566677766544 22333445678889886557
Q ss_pred CCCHHHHHHHHHHHcCCCCCeeecChHHHH
Q 043385 296 ALTPLEQGEILFRLLGKEPKFLKVPIGIMD 325 (405)
Q Consensus 296 ~~t~~ela~~l~~~~g~~~~~~~~p~~~~~ 325 (405)
.+|+.|+++.+.+.+|++.++..+|.+.+.
T Consensus 221 ~~t~~e~~~~~~~~~g~~~~~~~~~~~~~~ 250 (321)
T 3c1o_A 221 IISQNELISLWEAKSGLSFKKVHMPDEQLV 250 (321)
T ss_dssp EEEHHHHHHHHHHHHTSCCCEEEECHHHHH
T ss_pred cccHHHHHHHHHHHcCCcceeeeCCHHHHH
Confidence 899999999999999999999999987654
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.1e-29 Score=234.81 Aligned_cols=219 Identities=20% Similarity=0.273 Sum_probs=164.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC---CCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG---RNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+|+|+||||||+||++++++|+++|++|++++|++..... .......+.. .+++++.+|++|++++.+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~-~~v~~v~~D~~d~~~l~~~~~~---- 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQS-LGVILLEGDINDHETLVKAIKQ---- 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHH-TTCEEEECCTTCHHHHHHHHTT----
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHh-CCCEEEEeCCCCHHHHHHHHhC----
Confidence 5789999999999999999999999999999998621100 0000111222 4799999999999999999998
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcC-CCEEEEEcccccc-------CC-ChhHHHHHHHHHHHHHHHh
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQ-------KP-LLEFQRAKLKFEAEMMKVA 232 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~-------~~-~~~y~~sK~~~E~~~~~~~ 232 (405)
+|+|||+++... +.++.+++++|+++| ++|||+ |+.+.. .| ...| .+|..+|++++.
T Consensus 77 ~d~vi~~a~~~~----------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-- 142 (307)
T 2gas_A 77 VDIVICAAGRLL----------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA-- 142 (307)
T ss_dssp CSEEEECSSSSC----------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH--
T ss_pred CCEEEECCcccc----------cccHHHHHHHHHhcCCceEEee-cccccCcccccCCCcchhHH-HHHHHHHHHHHH--
Confidence 999999998642 457889999999998 999984 554422 12 2467 999999998876
Q ss_pred hhcCCceEEEEecCCcccCchHHH-HH---HHhCCCeEEecCCeeee-------------hhhcccccccceEeccCCCC
Q 043385 233 EEDSGFTYSIVRPTAFFKSLGGQV-EL---VKEGKPYVMFGDGKLCA-------------YCVLSEDKINQILPIGGPGK 295 (405)
Q Consensus 233 ~~~~gi~~~ilRp~~v~g~~~~~~-~~---~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y~i~~~g~ 295 (405)
.+++++++||+.+++++...+ .. ...++.+.++++++... .++..+...+++|++.++++
T Consensus 143 ---~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~ 219 (307)
T 2gas_A 143 ---EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKN 219 (307)
T ss_dssp ---HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGG
T ss_pred ---cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCC
Confidence 689999999999999764322 11 11334556677765433 22333445578888877656
Q ss_pred CCCHHHHHHHHHHHcCCCCCeeecChHHHH
Q 043385 296 ALTPLEQGEILFRLLGKEPKFLKVPIGIMD 325 (405)
Q Consensus 296 ~~t~~ela~~l~~~~g~~~~~~~~p~~~~~ 325 (405)
.+|+.|+++.+.+.+|++.++..+|.+.+.
T Consensus 220 ~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 249 (307)
T 2gas_A 220 YLTQNEVIALWEKKIGKTLEKTYVSEEQVL 249 (307)
T ss_dssp EEEHHHHHHHHHHHHTSCCEEEEECHHHHH
T ss_pred cCCHHHHHHHHHHHhCCCCceeecCHHHHH
Confidence 899999999999999999999999987654
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=252.81 Aligned_cols=258 Identities=16% Similarity=0.187 Sum_probs=172.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+|||||||||||++|+++|+++|++|++++|++.+. ..+.+|+.|. +.+++++ +|+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~~--~~~~l~~----~D~ 204 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLNP--ASDLLDG----ADV 204 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTSC--CTTTTTT----CSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccch--hHHhcCC----CCE
Confidence 78999999999999999999999999999999987642 1256787653 3455565 999
Q ss_pred EEEcccccCC------CCcchhHhHHHHHHHHHHH-HHhcCCCEEEEEccccccC--------------CChhHHHHHHH
Q 043385 165 VVSCLASRSG------GVKDSWKIDYEANRNSLVA-GRNCGASHFVLLSAICVQK--------------PLLEFQRAKLK 223 (405)
Q Consensus 165 Vv~~a~~~~~------~~~~~~~~n~~g~~~ll~a-a~~~~v~~~V~~Ss~~~~~--------------~~~~y~~sK~~ 223 (405)
|||||+.... .+...+++|+.++.+++++ +++.++++|||+||.++|. +.+.|+.+|..
T Consensus 205 Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~ 284 (516)
T 3oh8_A 205 LVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRD 284 (516)
T ss_dssp EEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHH
T ss_pred EEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHH
Confidence 9999997522 2334778999999999999 6777899999999999884 34579999999
Q ss_pred HHHHHHHHhhhcCCceEEEEecCCcccCchHHHHHHH----hCCCeEEecCCeeeehh------------hcccccccce
Q 043385 224 FEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVK----EGKPYVMFGDGKLCAYC------------VLSEDKINQI 287 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~~~~~~~----~g~~~~~~g~g~~~~~~------------~~~~~~~~~~ 287 (405)
.|.++..... .|++++++||+++|||..+++..+. .+.. ..++++.+.+.+ +......+++
T Consensus 285 ~E~~~~~~~~--~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~ 361 (516)
T 3oh8_A 285 WEHATAPASD--AGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGP 361 (516)
T ss_dssp HHHTTHHHHH--TTCEEEEEEECEEEBTTBSHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEE
T ss_pred HHHHHHHHHh--CCCCEEEEEeeEEECCCCChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHhCcccCCc
Confidence 9987665543 7999999999999999765544332 2322 356777765511 1122335679
Q ss_pred EeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhh--hhhhhhhhhcccCcc
Q 043385 288 LPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKI--GRYYAAESMLILDPE 365 (405)
Q Consensus 288 y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~ 365 (405)
||++++ +.+|+.|+++.+++.+|++. ..++|.+......+ .. ..+. ......+++
T Consensus 362 ~ni~~~-~~~s~~el~~~i~~~~g~~~-~~~~p~~~~~~~~g-------------------~~~~~~~~--~~~~~~~~~ 418 (516)
T 3oh8_A 362 INAVAP-NPVSNADMTKILATSMHRPA-FIQIPSLGPKILLG-------------------SQGAEELA--LASQRTAPA 418 (516)
T ss_dssp EEESCS-CCEEHHHHHHHTTC-----------------------------------------CCGGGGG--GCEEEECCH
T ss_pred EEEECC-CCCCHHHHHHHHHHHhCCCC-CCCCCHHHHHHHhC-------------------CchhHHHh--hcCCeechH
Confidence 999997 89999999999999999876 45666664432211 11 0011 112224566
Q ss_pred ccccccccCCccchhhHHHHHHHHhhcc
Q 043385 366 TGEYSAEKTPSYGKDTLEEFFERVLREG 393 (405)
Q Consensus 366 ~~~~~lg~~P~~~~~~l~~~~~~~~~~~ 393 (405)
+++ .+||.|++. ++++.+++.++..
T Consensus 419 kl~-~lG~~~~~~--~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 419 ALE-NLSHTFRYT--DIGAAIAHELGYE 443 (516)
T ss_dssp HHH-HTTCCCSCS--SHHHHHHHHHTCC
T ss_pred HHH-HCCCCCCCC--CHHHHHHHHhCcc
Confidence 666 689999543 3677777766643
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=241.21 Aligned_cols=218 Identities=18% Similarity=0.205 Sum_probs=156.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+|||||||||||++|+++|+++|++|++++|+.++..... ....+....+++++.+|++|++++.+++++ +|+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~D~ 83 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVS-HLLELQELGDLKIFRADLTDELSFEAPIAG----CDF 83 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTH-HHHHHGGGSCEEEEECCTTTSSSSHHHHTT----CSE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHH-HHHhcCCCCcEEEEecCCCChHHHHHHHcC----CCE
Confidence 689999999999999999999999999999999875432111 011122224788999999999999999988 999
Q ss_pred EEEcccccCC---CC-cchhHhHHHHHHHHHHHHHhcC-CCEEEEEcccccc------C-----------------CC--
Q 043385 165 VVSCLASRSG---GV-KDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQ------K-----------------PL-- 214 (405)
Q Consensus 165 Vv~~a~~~~~---~~-~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~------~-----------------~~-- 214 (405)
|||+|+.... ++ .+.+++|+.|+.+++++|++.+ ++||||+||.+++ . |.
T Consensus 84 Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~ 163 (338)
T 2rh8_A 84 VFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKP 163 (338)
T ss_dssp EEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------C
T ss_pred EEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCC
Confidence 9999986532 22 2378999999999999999986 9999999997631 1 11
Q ss_pred --hhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-----HHHHHH---HhCCCeEEecC--------C--eee
Q 043385 215 --LEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----GQVELV---KEGKPYVMFGD--------G--KLC 274 (405)
Q Consensus 215 --~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----~~~~~~---~~g~~~~~~g~--------g--~~~ 274 (405)
..|+.+|..+|.++..++. ..|+++++|||+++|||.. ..+..+ ..|.+. .++. + +..
T Consensus 164 ~~~~Y~~sK~~~E~~~~~~~~-~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i 241 (338)
T 2rh8_A 164 PTWGYPASKTLAEKAAWKFAE-ENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIA 241 (338)
T ss_dssp CCCCCTTSCCHHHHHHHHHHH-HHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEE
T ss_pred ccchHHHHHHHHHHHHHHHHH-HcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-ccccccccccccCcccEE
Confidence 1499999999999988765 3699999999999999853 122111 233322 1111 1 111
Q ss_pred e--hh------hcccccccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 275 A--YC------VLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 275 ~--~~------~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
. ++ +......++.|++++ ..+|+.|+++.+.+..+
T Consensus 242 ~v~Dva~a~~~~~~~~~~~~~~~~~~--~~~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 242 HVEDVCRAHIFVAEKESASGRYICCA--ANTSVPELAKFLSKRYP 284 (338)
T ss_dssp EHHHHHHHHHHHHHCTTCCEEEEECS--EEECHHHHHHHHHHHCT
T ss_pred EHHHHHHHHHHHHcCCCcCCcEEEec--CCCCHHHHHHHHHHhCC
Confidence 1 11 112223456798876 46899999999998875
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-28 Score=218.62 Aligned_cols=188 Identities=23% Similarity=0.348 Sum_probs=152.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC-HHHHHHHHHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN-LESLEKSLENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~~~~~~~d~ 164 (405)
|+||||||||+||++++++|+++|++|++++|++++.. ...+++++.+|++| ++++.+++++ +|+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~----------~~~~~~~~~~D~~d~~~~~~~~~~~----~d~ 66 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP----------QYNNVKAVHFDVDWTPEEMAKQLHG----MDA 66 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC----------CCTTEEEEECCTTSCHHHHHTTTTT----CSE
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh----------hcCCceEEEecccCCHHHHHHHHcC----CCE
Confidence 58999999999999999999999999999999986542 11589999999999 9999999988 999
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC----------ChhHHHHHHHHHHHHHHHhhh
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP----------LLEFQRAKLKFEAEMMKVAEE 234 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~----------~~~y~~sK~~~E~~~~~~~~~ 234 (405)
||||||... .+.+++|+.++.+++++|++.++++||++||.+++.+ ...|+.+|.++|++++.
T Consensus 67 vi~~ag~~~---~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~---- 139 (219)
T 3dqp_A 67 IINVSGSGG---KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTK---- 139 (219)
T ss_dssp EEECCCCTT---SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHH----
T ss_pred EEECCcCCC---CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHh----
Confidence 999999764 3467899999999999999999999999999988853 56899999999999862
Q ss_pred cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeee-----------hhhcccccccceEeccCCCCCCCHHHHH
Q 043385 235 DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCA-----------YCVLSEDKINQILPIGGPGKALTPLEQG 303 (405)
Q Consensus 235 ~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~-----------~~~~~~~~~~~~y~i~~~g~~~t~~ela 303 (405)
..+++++++||+++||+... . ....++....+ .++..+...+++||+++. ..++.|+.
T Consensus 140 ~~~i~~~ilrp~~v~g~~~~--------~-~~~~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g--~~~~~e~~ 208 (219)
T 3dqp_A 140 ETNLDYTIIQPGALTEEEAT--------G-LIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNG--KTAIKEAL 208 (219)
T ss_dssp SCCCEEEEEEECSEECSCCC--------S-EEEESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEEC--SEEHHHHH
T ss_pred ccCCcEEEEeCceEecCCCC--------C-ccccCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCC--CccHHHHH
Confidence 48999999999999997421 1 11122211111 333445556889999873 58888876
Q ss_pred HH
Q 043385 304 EI 305 (405)
Q Consensus 304 ~~ 305 (405)
+.
T Consensus 209 ~~ 210 (219)
T 3dqp_A 209 ES 210 (219)
T ss_dssp HT
T ss_pred HH
Confidence 53
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-29 Score=233.71 Aligned_cols=219 Identities=23% Similarity=0.325 Sum_probs=165.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcC--CCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIR--GRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+|+|+||||||+||++++++|+++|++|++++|+..... ........+. ..+++++.+|++|++++.+++++ +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~~----~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVKN----V 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHHT----C
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHcC----C
Confidence 578999999999999999999999999999999865320 0000011122 25899999999999999999998 9
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcC-CCEEEEEcccccc-------CC-ChhHHHHHHHHHHHHHHHhh
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQ-------KP-LLEFQRAKLKFEAEMMKVAE 233 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~-------~~-~~~y~~sK~~~E~~~~~~~~ 233 (405)
|+|||+++.. ++.++++++++|+++| ++|||+ |+.+.. .| ...| .+|..+|++++.
T Consensus 79 d~vi~~a~~~----------~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~--- 143 (308)
T 1qyc_A 79 DVVISTVGSL----------QIESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEA--- 143 (308)
T ss_dssp SEEEECCCGG----------GSGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH---
T ss_pred CEEEECCcch----------hhhhHHHHHHHHHhcCCCceEee-cccccCccccccCCcchhHH-HHHHHHHHHHHh---
Confidence 9999999853 2456789999999998 999985 665532 12 2357 999999999876
Q ss_pred hcCCceEEEEecCCcccCchHH-HHH---HHhCCCeEEecCCeeee-------------hhhcccccccceEeccCCCCC
Q 043385 234 EDSGFTYSIVRPTAFFKSLGGQ-VEL---VKEGKPYVMFGDGKLCA-------------YCVLSEDKINQILPIGGPGKA 296 (405)
Q Consensus 234 ~~~gi~~~ilRp~~v~g~~~~~-~~~---~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y~i~~~g~~ 296 (405)
.+++++++||+.+++++... ... ...++.+.++++++... .++..+...+++|++.++|+.
T Consensus 144 --~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~ 221 (308)
T 1qyc_A 144 --EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANT 221 (308)
T ss_dssp --HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGE
T ss_pred --cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCc
Confidence 68999999999999864321 111 12344566677776544 222334445788998875568
Q ss_pred CCHHHHHHHHHHHcCCCCCeeecChHHHH
Q 043385 297 LTPLEQGEILFRLLGKEPKFLKVPIGIMD 325 (405)
Q Consensus 297 ~t~~ela~~l~~~~g~~~~~~~~p~~~~~ 325 (405)
+|+.|+++.+.+.+|++.++..+|.+.+.
T Consensus 222 ~s~~e~~~~~~~~~g~~~~~~~~~~~~~~ 250 (308)
T 1qyc_A 222 LSLNELVALWEKKIDKTLEKAYVPEEEVL 250 (308)
T ss_dssp EEHHHHHHHHHHHTTSCCEEEEECHHHHH
T ss_pred cCHHHHHHHHHHHhCCCCceEeCCHHHHH
Confidence 99999999999999999999999987654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-29 Score=251.03 Aligned_cols=227 Identities=14% Similarity=0.137 Sum_probs=166.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh----------hccCCcEEEEcCCCCHHHHHH
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL----------NQLQGASVCFSDVTNLESLEK 153 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~----------~~~~~v~~~~~Dl~d~~~l~~ 153 (405)
.+|+|||||||||||++|+++|+++|++|++++|++.+.....+..+.+ ....+++++.+|+.|++.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 3579999999999999999999999999999999876321111110111 11358999999999988777
Q ss_pred HHHhhCCCccEEEEcccccC--CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc--c------------------
Q 043385 154 SLENLGTSIDVVVSCLASRS--GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV--Q------------------ 211 (405)
Q Consensus 154 ~~~~~~~~~d~Vv~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~--~------------------ 211 (405)
++. ++|+|||||+... .++...+++|+.++++++++|++ ++++|||+||.++ +
T Consensus 228 ~~~----~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~ 302 (508)
T 4f6l_B 228 LPE----NMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKG 302 (508)
T ss_dssp CSS----CCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSS
T ss_pred Ccc----CCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCccccccccccc
Confidence 444 4999999999754 35567889999999999999998 7789999999988 1
Q ss_pred -CCChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch--------------HHHHHHHhCCCeEEecCCeeee-
Q 043385 212 -KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG--------------GQVELVKEGKPYVMFGDGKLCA- 275 (405)
Q Consensus 212 -~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~--------------~~~~~~~~g~~~~~~g~g~~~~- 275 (405)
.+.+.|+.+|..+|++++.++. .|++++++||+.|||+.. .++..+..++.++ .++++..+
T Consensus 303 ~~~~~~Y~~sK~~~E~~~~~~~~--~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~g~~~~~ 379 (508)
T 4f6l_B 303 QLLTSPYTRSKFYSELKVLEAVN--NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVD 379 (508)
T ss_dssp BCCCSHHHHHHHHHHHHHHHHHH--TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEE-TTGGGSEEE
T ss_pred ccCCCcHHHHHHHHHHHHHHHHH--cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCC-CCccCceEE
Confidence 2567899999999999999775 799999999999999742 2233333444333 23334433
Q ss_pred ------------hhhcccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHH
Q 043385 276 ------------YCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIM 324 (405)
Q Consensus 276 ------------~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~ 324 (405)
.++..+. .+++||++++ +.+++.|+++.+.+.. .+.++.+.|..
T Consensus 380 ~v~v~DvA~ai~~~~~~~~-~~~~~nl~~~-~~~s~~el~~~i~~~~---~~~~~~~~w~~ 435 (508)
T 4f6l_B 380 FSFVDTTARQIVALAQVNT-PQIIYHVLSP-NKMPVKSLLECVKRKE---IELVSDESFNE 435 (508)
T ss_dssp CEEHHHHHHHHHHHTTBCC-SCSEEEESCS-CEEEHHHHHHHHHSSC---CEEECHHHHHH
T ss_pred EEcHHHHHHHHHHHHhCCC-CCCEEEeCCC-CCCCHHHHHHHHHHcC---CcccCHHHHHH
Confidence 1122233 7899999996 8999999999999865 45555555543
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=224.16 Aligned_cols=211 Identities=22% Similarity=0.339 Sum_probs=158.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++|+||||||+|+||++++++|+++ |++|++++|++.+. ..+ ..+++++.+|++|++++.+++++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~-------~~~--~~~~~~~~~D~~d~~~~~~~~~~---- 69 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-------EKI--GGEADVFIGDITDADSINPAFQG---- 69 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH-------HHT--TCCTTEEECCTTSHHHHHHHHTT----
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch-------hhc--CCCeeEEEecCCCHHHHHHHHcC----
Confidence 4689999999999999999999999 89999999986432 112 24788999999999999999998
Q ss_pred ccEEEEcccccCC-----------CC-------cchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC---Ch-----
Q 043385 162 IDVVVSCLASRSG-----------GV-------KDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP---LL----- 215 (405)
Q Consensus 162 ~d~Vv~~a~~~~~-----------~~-------~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~---~~----- 215 (405)
+|+||||||.... .. ...+++|+.++.++++++++.++++||++||.+++.+ ..
T Consensus 70 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~ 149 (253)
T 1xq6_A 70 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNG 149 (253)
T ss_dssp CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGC
T ss_pred CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccch
Confidence 9999999986421 01 2357899999999999999999999999999988632 22
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCe-eee---------hhhccccccc
Q 043385 216 EFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGK-LCA---------YCVLSEDKIN 285 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~-~~~---------~~~~~~~~~~ 285 (405)
.|..+|..+|.+++. .+++++++|||.+||+.......+. +....+++... ... .++..+...+
T Consensus 150 ~y~~sK~~~e~~~~~-----~~i~~~~vrpg~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~~~g 223 (253)
T 1xq6_A 150 NILVWKRKAEQYLAD-----SGTPYTIIRAGGLLDKEGGVRELLV-GKDDELLQTDTKTVPRADVAEVCIQALLFEEAKN 223 (253)
T ss_dssp CHHHHHHHHHHHHHT-----SSSCEEEEEECEEECSCSSSSCEEE-ESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTT
T ss_pred hHHHHHHHHHHHHHh-----CCCceEEEecceeecCCcchhhhhc-cCCcCCcCCCCcEEcHHHHHHHHHHHHcCccccC
Confidence 366799999998875 7999999999999998643210000 00000111111 111 2233344567
Q ss_pred ceEeccCC--CCCCCHHHHHHHHHHHcCCC
Q 043385 286 QILPIGGP--GKALTPLEQGEILFRLLGKE 313 (405)
Q Consensus 286 ~~y~i~~~--g~~~t~~ela~~l~~~~g~~ 313 (405)
++||++++ |+.+|+.|+++.+.+.+|++
T Consensus 224 ~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 224 KAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp EEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred CEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 89999985 23699999999999998864
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.8e-28 Score=222.52 Aligned_cols=209 Identities=13% Similarity=0.046 Sum_probs=158.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|+||||||+|+||++++++|+++|++|++++|++.+.. ..+++++.+|++|++++.+++++ +|
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~----~D 66 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVAG----CD 66 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHTT----CS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHcC----CC
Confidence 3578999999999999999999999999999999976532 24789999999999999999998 99
Q ss_pred EEEEcccccC-CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---------------CCChhHHHHHHHHHHH
Q 043385 164 VVVSCLASRS-GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---------------KPLLEFQRAKLKFEAE 227 (405)
Q Consensus 164 ~Vv~~a~~~~-~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---------------~~~~~y~~sK~~~E~~ 227 (405)
+||||||... .+++..+++|+.|+.++++++++.+++|||++||..++ .|.+.|+.+|..+|.+
T Consensus 67 ~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 146 (267)
T 3rft_A 67 GIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENL 146 (267)
T ss_dssp EEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred EEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Confidence 9999999754 34567899999999999999999999999999999887 3447899999999999
Q ss_pred HHHHhhhcCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCC-eeeehhhcccccccceEeccCCCCCCCHHHHHHHH
Q 043385 228 MMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDG-KLCAYCVLSEDKINQILPIGGPGKALTPLEQGEIL 306 (405)
Q Consensus 228 ~~~~~~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g-~~~~~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l 306 (405)
++.++. +.++++++|||+.+|++...--. ... .....+- .....++..++..+.++++.++ +..++.++...
T Consensus 147 ~~~~a~-~~g~~~~~vr~~~v~~~~~~~~~-~~~---~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~- 219 (267)
T 3rft_A 147 ARMYFD-KFGQETALVRIGSCTPEPNNYRM-LST---WFSHDDFVSLIEAVFRAPVLGCPVVWGASA-NDAGWWDNSHL- 219 (267)
T ss_dssp HHHHHH-HHCCCEEEEEECBCSSSCCSTTH-HHH---BCCHHHHHHHHHHHHHCSCCCSCEEEECCC-CTTCCBCCGGG-
T ss_pred HHHHHH-HhCCeEEEEEeecccCCCCCCCc-eee---EEcHHHHHHHHHHHHhCCCCCceEEEEeCC-CCCCcccChhH-
Confidence 998876 47999999999999997421000 000 0000000 0001233344445567888776 67777666433
Q ss_pred HHHcCCCCC
Q 043385 307 FRLLGKEPK 315 (405)
Q Consensus 307 ~~~~g~~~~ 315 (405)
+.+|.+++
T Consensus 220 -~~~g~~p~ 227 (267)
T 3rft_A 220 -GFLGWKPK 227 (267)
T ss_dssp -GGGCCCCC
T ss_pred -HHCCCCCC
Confidence 56676443
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=213.68 Aligned_cols=195 Identities=15% Similarity=0.221 Sum_probs=133.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||||+||++++++|+++|++|++++|++++. ..+. ++++++.+|++|++. +++.+ +|+|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------~~~~--~~~~~~~~D~~d~~~--~~~~~----~d~v 65 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKI-------TQTH--KDINILQKDIFDLTL--SDLSD----QNVV 65 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHH-------HHHC--SSSEEEECCGGGCCH--HHHTT----CSEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhh-------hhcc--CCCeEEeccccChhh--hhhcC----CCEE
Confidence 6899999999999999999999999999999987643 2222 589999999999987 77777 9999
Q ss_pred EEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------CChhHHHHHHHHHHHHHH
Q 043385 166 VSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------PLLEFQRAKLKFEAEMMK 230 (405)
Q Consensus 166 v~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------~~~~y~~sK~~~E~~~~~ 230 (405)
|||||.... ..+.|+.++++++++|++.+++|||++||.+++. |.+.|+.+|...|.+..
T Consensus 66 i~~ag~~~~----~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~- 140 (221)
T 3ew7_A 66 VDAYGISPD----EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEH- 140 (221)
T ss_dssp EECCCSSTT----TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHH-
T ss_pred EECCcCCcc----ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHH-
Confidence 999997532 3467999999999999999999999999987641 34558899999998632
Q ss_pred HhhhcCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeee----------hhhcccccccceEeccCCCCCCCHH
Q 043385 231 VAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCA----------YCVLSEDKINQILPIGGPGKALTPL 300 (405)
Q Consensus 231 ~~~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~----------~~~~~~~~~~~~y~i~~~g~~~t~~ 300 (405)
+..+..+++++++||+++|||....-.....+..+...+++.... .++..+...+++||++++ ...+..
T Consensus 141 ~~~~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~-~~~~~~ 219 (221)
T 3ew7_A 141 LKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGK-LEHHHH 219 (221)
T ss_dssp HHTTTTTSCEEEEECSSCCCCC---------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--------
T ss_pred HHhhccCccEEEEeCcceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCC-Cccccc
Confidence 221137999999999999998432111112233333344443222 344556677889999987 555544
Q ss_pred H
Q 043385 301 E 301 (405)
Q Consensus 301 e 301 (405)
|
T Consensus 220 ~ 220 (221)
T 3ew7_A 220 H 220 (221)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-26 Score=213.67 Aligned_cols=236 Identities=19% Similarity=0.203 Sum_probs=176.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|||||||||||++++++|++ |++|++++|++.. . ++ +.+|++|++++.+++++. ++|+|
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~--------~-----~~---~~~Dl~~~~~~~~~~~~~--~~d~v 61 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI--------Q-----GG---YKLDLTDFPRLEDFIIKK--RPDVI 61 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC--------T-----TC---EECCTTSHHHHHHHHHHH--CCSEE
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC--------C-----CC---ceeccCCHHHHHHHHHhc--CCCEE
Confidence 5799999999999999999994 8999999998742 1 13 789999999999999863 58999
Q ss_pred EEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-------------CChhHHHHHHHHHHH
Q 043385 166 VSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-------------PLLEFQRAKLKFEAE 227 (405)
Q Consensus 166 v~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-------------~~~~y~~sK~~~E~~ 227 (405)
|||||... .++...+++|+.++.+++++|++.++ +||++||.++|. |.+.|+.+|.++|.+
T Consensus 62 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 140 (273)
T 2ggs_A 62 INAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETF 140 (273)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHH
T ss_pred EECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999754 24566889999999999999999887 999999999873 357899999999998
Q ss_pred HHHHhhhcCCceEEEEecCCcccCch---HHHHHHHhCCCeEEecCCeeee----hh------hcccccccceEeccCCC
Q 043385 228 MMKVAEEDSGFTYSIVRPTAFFKSLG---GQVELVKEGKPYVMFGDGKLCA----YC------VLSEDKINQILPIGGPG 294 (405)
Q Consensus 228 ~~~~~~~~~gi~~~ilRp~~v~g~~~---~~~~~~~~g~~~~~~g~g~~~~----~~------~~~~~~~~~~y~i~~~g 294 (405)
++. ++++++||+.+||+.. .++..+..+.++...++ ...+ ++ +.... .+++||+++
T Consensus 141 ~~~-------~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~-~~g~~~i~~-- 209 (273)
T 2ggs_A 141 ALQ-------DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELR-KTGIIHVAG-- 209 (273)
T ss_dssp HCC-------TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHT-CCEEEECCC--
T ss_pred HhC-------CCeEEEeccccccccHHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcC-cCCeEEECC--
Confidence 753 6789999999998432 22345566777766665 2111 11 11122 256999997
Q ss_pred CCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccC
Q 043385 295 KALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKT 374 (405)
Q Consensus 295 ~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~ 374 (405)
+.+|+.|+++.+.+.+|.+.++...+ +.. ...+ . ......+|.++++..|||+
T Consensus 210 ~~~s~~e~~~~~~~~~g~~~~~~~~~-~~~-----------~~~~--------~-------~~~~~~~d~~k~~~~lG~~ 262 (273)
T 2ggs_A 210 ERISRFELALKIKEKFNLPGEVKEVD-EVR-----------GWIA--------K-------RPYDSSLDSSRARKILSTD 262 (273)
T ss_dssp CCEEHHHHHHHHHHHTTCCSCEEEES-SCT-----------TCCS--------C-------CCSBCCBCCHHHHHHCSSC
T ss_pred CcccHHHHHHHHHHHhCCChhhcccc-ccc-----------cccc--------C-------CCcccccCHHHHHHHhCCC
Confidence 69999999999999999887654321 100 0000 0 0122347888999999999
Q ss_pred C-ccch
Q 043385 375 P-SYGK 379 (405)
Q Consensus 375 P-~~~~ 379 (405)
| .+..
T Consensus 263 p~~~~l 268 (273)
T 2ggs_A 263 FYTLDL 268 (273)
T ss_dssp CCSCCG
T ss_pred CCCccc
Confidence 9 4444
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4e-27 Score=227.92 Aligned_cols=193 Identities=19% Similarity=0.182 Sum_probs=159.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
|+|||||||||||++|+++|+++|+ +|++++|+ .|++++.+++++ +|+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~----~d~ 49 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLK----ADF 49 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHH----CSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhcc----CCE
Confidence 6899999999999999999999998 77666553 678899999998 999
Q ss_pred EEEcccccCC-CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEccccccCCChhHHHHHHHHHHHHHHHhhhcCCceEEE
Q 043385 165 VVSCLASRSG-GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSI 242 (405)
Q Consensus 165 Vv~~a~~~~~-~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~i 242 (405)
|||+|+.... ++...+++|+.++.+++++|++.+++ +|||+||.++|. .+.|+.+|..+|++++.++. +.++++++
T Consensus 50 Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~-~~~Y~~sK~~~E~~~~~~~~-~~g~~~~i 127 (369)
T 3st7_A 50 IVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ-DNPYGESKLQGEQLLREYAE-EYGNTVYI 127 (369)
T ss_dssp EEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-CSHHHHHHHHHHHHHHHHHH-HHCCCEEE
T ss_pred EEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-CCCchHHHHHHHHHHHHHHH-HhCCCEEE
Confidence 9999997643 45667889999999999999999987 999999999987 78999999999999999876 46899999
Q ss_pred EecCCcccCch---------HHHHHHHhCCCeEEecCCeeee-------------hhhcccccc-cceEeccCCCCCCCH
Q 043385 243 VRPTAFFKSLG---------GQVELVKEGKPYVMFGDGKLCA-------------YCVLSEDKI-NQILPIGGPGKALTP 299 (405)
Q Consensus 243 lRp~~v~g~~~---------~~~~~~~~g~~~~~~g~g~~~~-------------~~~~~~~~~-~~~y~i~~~g~~~t~ 299 (405)
+||+++||+.. .++..+..+.++.+ +++...+ .++..+... +++||++++ +.+|+
T Consensus 128 ~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~-~~~s~ 205 (369)
T 3st7_A 128 YRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNV-FKVTL 205 (369)
T ss_dssp EEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCC-EEEEH
T ss_pred EECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCC-CceeH
Confidence 99999999842 24556667777654 4555443 222233333 799999986 89999
Q ss_pred HHHHHHHHHHcCCC
Q 043385 300 LEQGEILFRLLGKE 313 (405)
Q Consensus 300 ~ela~~l~~~~g~~ 313 (405)
.|+++.+.+.+|.+
T Consensus 206 ~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 206 GEIVDLLYKFKQSR 219 (369)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999876
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-27 Score=227.17 Aligned_cols=218 Identities=15% Similarity=0.175 Sum_probs=164.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcC-CCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSD-VTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~D-l~d~~~l~~~~~~~~~~~ 162 (405)
.+|+|+|||||||||++|+++|+++|++|++++|++++.. ...+...++++++.+| ++|++++.+++++ +
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-----~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~----~ 74 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-----AEELQAIPNVTLFQGPLLNNVPLMDTLFEG----A 74 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-----HHHHHTSTTEEEEESCCTTCHHHHHHHHTT----C
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh-----HHHHhhcCCcEEEECCccCCHHHHHHHHhc----C
Confidence 3578999999999999999999999999999999876531 0122323478999999 9999999999998 9
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcC-CCEEEEEcccc--cc--CCChhHHHHHHHHHHHHHHHhhhcCC
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCG-ASHFVLLSAIC--VQ--KPLLEFQRAKLKFEAEMMKVAEEDSG 237 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~--~~--~~~~~y~~sK~~~E~~~~~~~~~~~g 237 (405)
|+||||++... .+.|..+ ++++++|++.| ++||||+||.+ .+ .+...|+.+|.++|++++. .+
T Consensus 75 d~Vi~~a~~~~------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~-----~g 142 (352)
T 1xgk_A 75 HLAFINTTSQA------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ-----LG 142 (352)
T ss_dssp SEEEECCCSTT------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT-----SS
T ss_pred CEEEEcCCCCC------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHH-----cC
Confidence 99999987542 1357776 99999999999 99999999986 34 3457899999999999986 69
Q ss_pred ceEEEEecCCcccCchH-----HHHH--HHhCCCe-EEecCCeeee-------h-------hhccc--ccccceEeccCC
Q 043385 238 FTYSIVRPTAFFKSLGG-----QVEL--VKEGKPY-VMFGDGKLCA-------Y-------CVLSE--DKINQILPIGGP 293 (405)
Q Consensus 238 i~~~ilRp~~v~g~~~~-----~~~~--~~~g~~~-~~~g~g~~~~-------~-------~~~~~--~~~~~~y~i~~~ 293 (405)
+++++|||+ +||+... ++.. ...+... .++++++... + ++..+ ...+++||+++
T Consensus 143 i~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~- 220 (352)
T 1xgk_A 143 LPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF- 220 (352)
T ss_dssp SCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-
T ss_pred CCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-
Confidence 999999988 5675321 1110 1233322 2344443322 1 11122 22588999995
Q ss_pred CCCCCHHHHHHHHHHHcCCCCCeeecChHHHH
Q 043385 294 GKALTPLEQGEILFRLLGKEPKFLKVPIGIMD 325 (405)
Q Consensus 294 g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~ 325 (405)
+.+|+.|+++.+.+.+|++.++.++|.+.++
T Consensus 221 -~~~s~~e~~~~i~~~~G~~~~~~~vp~~~~~ 251 (352)
T 1xgk_A 221 -ETLSPVQVCAAFSRALNRRVTYVQVPKVEIK 251 (352)
T ss_dssp -EEECHHHHHHHHHHHHTSCEEEEECSSCCCC
T ss_pred -CCCCHHHHHHHHHHHHCCCCceEECCHHHHH
Confidence 5799999999999999999999999966544
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-26 Score=208.94 Aligned_cols=148 Identities=18% Similarity=0.225 Sum_probs=122.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||||+||++++++|+++|++|++++|++++. ..+.. .+++++.+|++|++. +++++ +|+|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~-------~~~~~-~~~~~~~~D~~d~~~--~~~~~----~d~v 66 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA-------ADRLG-ATVATLVKEPLVLTE--ADLDS----VDAV 66 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHTC-TTSEEEECCGGGCCH--HHHTT----CSEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc-------ccccC-CCceEEecccccccH--hhccc----CCEE
Confidence 5799999999999999999999999999999987543 22222 489999999999887 77777 9999
Q ss_pred EEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-----------------CChhHHHHHHHHHHHH
Q 043385 166 VSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-----------------PLLEFQRAKLKFEAEM 228 (405)
Q Consensus 166 v~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-----------------~~~~y~~sK~~~E~~~ 228 (405)
|||||..+. ....++|+.++++++++|++.+ +|||++||.+++. |.+.|+.+|...|.+
T Consensus 67 i~~ag~~~~--~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~- 142 (224)
T 3h2s_A 67 VDALSVPWG--SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEY- 142 (224)
T ss_dssp EECCCCCTT--SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH-
T ss_pred EECCccCCC--cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHH-
Confidence 999998632 2345789999999999999999 9999999986541 156799999999954
Q ss_pred HHHhhhcCCceEEEEecCCcccCc
Q 043385 229 MKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 229 ~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
..+.. ..++++++|||+++||+.
T Consensus 143 ~~~~~-~~~i~~~ivrp~~v~g~~ 165 (224)
T 3h2s_A 143 QFLQM-NANVNWIGISPSEAFPSG 165 (224)
T ss_dssp HHHTT-CTTSCEEEEEECSBCCCC
T ss_pred HHHHh-cCCCcEEEEcCccccCCC
Confidence 44443 479999999999999984
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=213.92 Aligned_cols=209 Identities=13% Similarity=0.087 Sum_probs=158.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+|||||||||||++++++|+++|++|++++|++.+.. . .+++++.+|++|++.+.+++++ +|+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~--~~~~~~~~Dl~d~~~~~~~~~~----~d~ 66 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------E--AHEEIVACDLADAQAVHDLVKD----CDG 66 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------C--TTEEECCCCTTCHHHHHHHHTT----CSE
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------C--CCccEEEccCCCHHHHHHHHcC----CCE
Confidence 468999999999999999999999999999999875421 1 3678899999999999999998 999
Q ss_pred EEEcccccC-CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC---------------CChhHHHHHHHHHHHH
Q 043385 165 VVSCLASRS-GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK---------------PLLEFQRAKLKFEAEM 228 (405)
Q Consensus 165 Vv~~a~~~~-~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~---------------~~~~y~~sK~~~E~~~ 228 (405)
|||||+... ..+...+++|+.++.++++++++.++++|||+||..+|. |.+.|+.+|..+|.++
T Consensus 67 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 146 (267)
T 3ay3_A 67 IIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLA 146 (267)
T ss_dssp EEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred EEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Confidence 999999753 344567899999999999999999999999999998873 2478999999999999
Q ss_pred HHHhhhcCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCC-eeeehhhcccccccceEeccCCCCCCCHHHHHHHHH
Q 043385 229 MKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDG-KLCAYCVLSEDKINQILPIGGPGKALTPLEQGEILF 307 (405)
Q Consensus 229 ~~~~~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g-~~~~~~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~ 307 (405)
+.++. ..+++++++||+++|+.... -..... .....+- .....++..+...+++|++.++ ...++.|+.+.
T Consensus 147 ~~~~~-~~gi~~~~lrp~~v~~~~~~-~~~~~~---~~~~~dva~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~-- 218 (267)
T 3ay3_A 147 SLYYH-KFDIETLNIRIGSCFPKPKD-ARMMAT---WLSVDDFMRLMKRAFVAPKLGCTVVYGASA-NTESWWDNDKS-- 218 (267)
T ss_dssp HHHHH-TTCCCEEEEEECBCSSSCCS-HHHHHH---BCCHHHHHHHHHHHHHSSCCCEEEEEECCS-CSSCCBCCGGG--
T ss_pred HHHHH-HcCCCEEEEeceeecCCCCC-CCeeec---cccHHHHHHHHHHHHhCCCCCceeEecCCC-ccccccCHHHH--
Confidence 88765 57999999999999853210 000000 0000000 0000222233333578888876 67888888877
Q ss_pred HHcCCCCCe
Q 043385 308 RLLGKEPKF 316 (405)
Q Consensus 308 ~~~g~~~~~ 316 (405)
+.+|.++.+
T Consensus 219 ~~lg~~p~~ 227 (267)
T 3ay3_A 219 AFLGWVPQD 227 (267)
T ss_dssp GGGCCCCCC
T ss_pred HHcCCCCCC
Confidence 788876553
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.5e-25 Score=194.70 Aligned_cols=146 Identities=21% Similarity=0.308 Sum_probs=126.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+|+||||||+||++++++|+++|++|++++|++++... .. ..+++++.+|++|++++.+++++ +|+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~~----~d~ 70 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------EG-PRPAHVVVGDVLQAADVDKTVAG----QDA 70 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------SS-CCCSEEEESCTTSHHHHHHHHTT----CSE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-------cc-CCceEEEEecCCCHHHHHHHHcC----CCE
Confidence 3799999999999999999999999999999998765421 11 24789999999999999999998 999
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-------CChhHHHHHHHHHHHHHHHhhhcCC
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-------PLLEFQRAKLKFEAEMMKVAEEDSG 237 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-------~~~~y~~sK~~~E~~~~~~~~~~~g 237 (405)
|||+++.... .+..++|+.++.++++++++.++++||++||.++|. +...|+.+|..+|++++. .+
T Consensus 71 vi~~a~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-----~~ 143 (206)
T 1hdo_A 71 VIVLLGTRND--LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRE-----SG 143 (206)
T ss_dssp EEECCCCTTC--CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHH-----TC
T ss_pred EEECccCCCC--CCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHh-----CC
Confidence 9999997543 123468999999999999999999999999999884 456899999999999865 79
Q ss_pred ceEEEEecCCcc
Q 043385 238 FTYSIVRPTAFF 249 (405)
Q Consensus 238 i~~~ilRp~~v~ 249 (405)
++++++||+.++
T Consensus 144 i~~~~lrp~~~~ 155 (206)
T 1hdo_A 144 LKYVAVMPPHIG 155 (206)
T ss_dssp SEEEEECCSEEE
T ss_pred CCEEEEeCCccc
Confidence 999999999984
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-26 Score=206.72 Aligned_cols=147 Identities=21% Similarity=0.344 Sum_probs=127.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++|+|+||||||+||++++++|+++|+ +|++++|++.+. .++++++.+|++|++++.+++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~------------~~~~~~~~~D~~~~~~~~~~~------ 65 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPRLDNPVGPLAELLPQLDGS------ 65 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTTEECCBSCHHHHGGGCCSC------
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc------------CCCceEEeccccCHHHHHHhh------
Confidence 457999999999999999999999998 999999987641 247888899999887776544
Q ss_pred ccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-CChhHHHHHHHHHHHHHHHhhhcCC
Q 043385 162 IDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-PLLEFQRAKLKFEAEMMKVAEEDSG 237 (405)
Q Consensus 162 ~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-~~~~y~~sK~~~E~~~~~~~~~~~g 237 (405)
+|+||||||... .++.+.+++|+.++.++++++++.++++||++||.+++. +.+.|+.+|.++|++++. .+
T Consensus 66 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~y~~sK~~~e~~~~~-----~~ 140 (215)
T 2a35_A 66 IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQE-----QG 140 (215)
T ss_dssp CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTT-----SC
T ss_pred hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCccHHHHHHHHHHHHHHH-----cC
Confidence 799999999753 355668899999999999999999999999999999984 568999999999998876 68
Q ss_pred ce-EEEEecCCcccCch
Q 043385 238 FT-YSIVRPTAFFKSLG 253 (405)
Q Consensus 238 i~-~~ilRp~~v~g~~~ 253 (405)
++ ++++||+.+|||..
T Consensus 141 ~~~~~~vrp~~v~g~~~ 157 (215)
T 2a35_A 141 WPQLTIARPSLLFGPRE 157 (215)
T ss_dssp CSEEEEEECCSEESTTS
T ss_pred CCeEEEEeCceeeCCCC
Confidence 99 99999999999864
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.5e-25 Score=202.35 Aligned_cols=154 Identities=21% Similarity=0.375 Sum_probs=132.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+++|+||||||+|+||++++++|+++|+ +|++++|++++... .. ..++.++.+|++|++++.+++++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~-------~~-~~~~~~~~~D~~d~~~~~~~~~~--- 84 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------EA-YKNVNQEVVDFEKLDDYASAFQG--- 84 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-------GG-GGGCEEEECCGGGGGGGGGGGSS---
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccc-------cc-cCCceEEecCcCCHHHHHHHhcC---
Confidence 3568999999999999999999999999 99999998875431 11 13688999999999999998887
Q ss_pred CccEEEEcccccC--CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-CChhHHHHHHHHHHHHHHHhhhcCC
Q 043385 161 SIDVVVSCLASRS--GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-PLLEFQRAKLKFEAEMMKVAEEDSG 237 (405)
Q Consensus 161 ~~d~Vv~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-~~~~y~~sK~~~E~~~~~~~~~~~g 237 (405)
+|+||||||... ..+...+++|+.++.++++++++.++++||++||.++|. +...|+.+|.++|.+++. .+
T Consensus 85 -~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~Y~~sK~~~e~~~~~-----~~ 158 (242)
T 2bka_A 85 -HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEE-----LK 158 (242)
T ss_dssp -CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHT-----TC
T ss_pred -CCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCcchHHHHHHHHHHHHHh-----cC
Confidence 999999999643 234567889999999999999999999999999999985 567899999999999876 57
Q ss_pred c-eEEEEecCCcccCch
Q 043385 238 F-TYSIVRPTAFFKSLG 253 (405)
Q Consensus 238 i-~~~ilRp~~v~g~~~ 253 (405)
+ ++++||||.+||+..
T Consensus 159 ~~~~~~vrpg~v~~~~~ 175 (242)
T 2bka_A 159 FDRYSVFRPGVLLCDRQ 175 (242)
T ss_dssp CSEEEEEECCEEECTTG
T ss_pred CCCeEEEcCceecCCCC
Confidence 7 799999999999853
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-25 Score=204.18 Aligned_cols=223 Identities=16% Similarity=0.182 Sum_probs=146.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh---h-ccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL---N-QLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~---~-~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
+++++||||||+|+||++++++|+++|++|++++|++++..... +.+ . ...++.++.+|++|+++++++++.+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETR---QQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 80 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence 56789999999999999999999999999999999865432111 111 1 1135788999999999999888743
Q ss_pred C---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccc-cC---CC
Q 043385 159 G---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICV-QK---PL 214 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~-~~---~~ 214 (405)
. +++|+||||||.... +++..+++|+.++.++++++.. .+ ++||++||..+ +. +.
T Consensus 81 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~ 159 (278)
T 1spx_A 81 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDF 159 (278)
T ss_dssp HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTS
T ss_pred HHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCc
Confidence 2 359999999996431 1234678999998888877654 36 89999999987 53 35
Q ss_pred hhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCchHH--------------HHHHHhCCCeEEecCCeeee---
Q 043385 215 LEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQ--------------VELVKEGKPYVMFGDGKLCA--- 275 (405)
Q Consensus 215 ~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~--------------~~~~~~g~~~~~~g~g~~~~--- 275 (405)
..|+.+|...+.+.+.++.+ ..|+++++|+||+++++.... ...+....+..-++......
T Consensus 160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v 239 (278)
T 1spx_A 160 PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVI 239 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHH
Confidence 67999999999999988765 469999999999999875321 11111111111011111111
Q ss_pred -hhhcccc---cccceEeccCCCCCCCHHHHHHHHHHHc
Q 043385 276 -YCVLSED---KINQILPIGGPGKALTPLEQGEILFRLL 310 (405)
Q Consensus 276 -~~~~~~~---~~~~~y~i~~~g~~~t~~ela~~l~~~~ 310 (405)
.++..+. ..|++|++.| |..+++.|+++.+.+++
T Consensus 240 ~~l~s~~~~~~~tG~~~~vdg-G~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 240 AFLADRKTSSYIIGHQLVVDG-GSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp HHHHCHHHHTTCCSCEEEEST-TGGGC------------
T ss_pred HHHcCccccCcccCcEEEECC-CcccccCcccccHHHHh
Confidence 1222222 4588999988 48899999999988754
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.6e-25 Score=204.79 Aligned_cols=164 Identities=23% Similarity=0.266 Sum_probs=134.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++|+||||||+|+||++++++|+++|++|++++|+.++.. +.... ..+++++.+|++|+++++++++.+.
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD------DLVAAYPDRAEAISLDVTDGERIDVVAADVLAR 76 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH------HHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHhccCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence 45689999999999999999999999999999999876542 11111 2478999999999999998887532
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.| ++++++.+++.+.++||++||..++. +...|+.+|.
T Consensus 77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 156 (281)
T 3m1a_A 77 YGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKA 156 (281)
T ss_dssp HSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHH
Confidence 469999999996431 233477899999 77777777888888999999998874 4678999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.|.+.+.++.+ ..|+++++++||+++++.
T Consensus 157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (281)
T 3m1a_A 157 ALEQLSEGLADEVAPFGIKVLIVEPGAFRTNL 188 (281)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCcccccc
Confidence 999999988875 469999999999998875
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-25 Score=206.65 Aligned_cols=232 Identities=20% Similarity=0.243 Sum_probs=165.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.++++++||||||+|+||++++++|+++|++|++++|++++.......+..... ..++.++.+|++|+++++++++.+.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999987654321111111110 1157889999999999998887642
Q ss_pred ---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccccC---CChhHHH
Q 043385 160 ---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQK---PLLEFQR 219 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~~---~~~~y~~ 219 (405)
+++|+||||||.... +++..+++|+.++.++++++.. .+-++||++||..++. +...|+.
T Consensus 87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 166 (281)
T 3svt_A 87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGV 166 (281)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHH
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHH
Confidence 578999999996211 2345788999998888886643 4456999999998764 4578999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCchHH-------HHHHHhCCCeEEecCCeeee---hhhccc---ccc
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQ-------VELVKEGKPYVMFGDGKLCA---YCVLSE---DKI 284 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~-------~~~~~~g~~~~~~g~g~~~~---~~~~~~---~~~ 284 (405)
+|.+.+.+.+.++.+ ..|+++++|+||+++++.... ........++.-++...... .++..+ ...
T Consensus 167 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~it 246 (281)
T 3svt_A 167 TKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVT 246 (281)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCC
Confidence 999999999988875 568999999999999986432 22333333332222222111 122222 235
Q ss_pred cceEeccCCCCCCC-HHHHHHHHHHHcCCC
Q 043385 285 NQILPIGGPGKALT-PLEQGEILFRLLGKE 313 (405)
Q Consensus 285 ~~~y~i~~~g~~~t-~~ela~~l~~~~g~~ 313 (405)
|++|++.| |..++ ..|+++.+.+.+|.+
T Consensus 247 G~~~~vdg-G~~~~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 247 GQVINVDG-GQMLRRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp SCEEEEST-TGGGSCCCCCHHHHHHHHCTT
T ss_pred CCEEEeCC-ChhcccCCcchhccccccCCc
Confidence 88999987 46665 678888888888865
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.5e-24 Score=190.39 Aligned_cols=141 Identities=16% Similarity=0.224 Sum_probs=121.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHH-hCCCeEEEEecCCC-CcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELV-SRGFNVIAIAREKS-GIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~l~r~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++||||||+|+||++++++|+ ++|++|++++|+++ +.. .......+++++.+|++|++++.+++++ +
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~D~~d~~~~~~~~~~----~ 74 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIP------PEIIDHERVTVIEGSFQNPGXLEQAVTN----A 74 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSC------HHHHTSTTEEEEECCTTCHHHHHHHHTT----C
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccch------hhccCCCceEEEECCCCCHHHHHHHHcC----C
Confidence 4569999999999999999999 89999999999876 442 1111235899999999999999999998 9
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCC---h----------hHHHHHHHHHHHHH
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPL---L----------EFQRAKLKFEAEMM 229 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~---~----------~y~~sK~~~E~~~~ 229 (405)
|+||||+|.. |+. ++++++++++.+++|||++||.+++.+. . .|+.+|..+|.+++
T Consensus 75 d~vv~~ag~~----------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~ 143 (221)
T 3r6d_A 75 EVVFVGAMES----------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLR 143 (221)
T ss_dssp SEEEESCCCC----------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCC----------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHH
Confidence 9999999853 556 9999999999999999999999998532 1 79999999999987
Q ss_pred HHhhhcCCceEEEEecCCcccC
Q 043385 230 KVAEEDSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 230 ~~~~~~~gi~~~ilRp~~v~g~ 251 (405)
. .++++++||||+++++
T Consensus 144 ~-----~~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 144 E-----SNLNYTILRLTWLYND 160 (221)
T ss_dssp H-----SCSEEEEEEECEEECC
T ss_pred h-----CCCCEEEEechhhcCC
Confidence 6 7999999999999987
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=197.44 Aligned_cols=214 Identities=12% Similarity=0.140 Sum_probs=154.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++..... +.+. ...++.++.+|++|+++++++++.+.
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVV---DEIQQLGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHH---HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH---HHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999865432111 1111 12468899999999999998887321
Q ss_pred --CCccEEEEcccccCC--------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+.++||++||..++. +...|+.+|.
T Consensus 85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 164 (255)
T 1fmc_A 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKA 164 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence 359999999997532 123467899999888888764 55778999999998874 4578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch------HHHHHHHhCCCeEEecCCeeee----hhhccc--ccccceE
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG------GQVELVKEGKPYVMFGDGKLCA----YCVLSE--DKINQIL 288 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~------~~~~~~~~g~~~~~~g~g~~~~----~~~~~~--~~~~~~y 288 (405)
+.|.+++.++.+ ..+++++++|||.++++.. .+...+..+.++..++..+... .++..+ ...+++|
T Consensus 165 a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~ 244 (255)
T 1fmc_A 165 AASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQIL 244 (255)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEE
Confidence 999999988764 4699999999999998742 2233444454433233222111 122222 1357899
Q ss_pred eccCCCCCCCH
Q 043385 289 PIGGPGKALTP 299 (405)
Q Consensus 289 ~i~~~g~~~t~ 299 (405)
++.+ |..+|+
T Consensus 245 ~v~g-g~~~s~ 254 (255)
T 1fmc_A 245 TVSG-GGVQEL 254 (255)
T ss_dssp EEST-TSCCCC
T ss_pred EECC-ceeccC
Confidence 9987 466654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-24 Score=199.06 Aligned_cols=225 Identities=16% Similarity=0.104 Sum_probs=160.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.+.... ....+....++.++.+|++|+++++++++.+.
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 89 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQK---VCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK 89 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---HHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHH---HHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999997643210 01112222268999999999999998887431
Q ss_pred -CCccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccccC----CChhHHH
Q 043385 160 -TSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQK----PLLEFQR 219 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~~----~~~~y~~ 219 (405)
+++|+||||||.... .+.+.+++|+.++.++++++.. .+.++||++||..++. +...|+.
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~ 169 (278)
T 2bgk_A 90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTA 169 (278)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHH
T ss_pred cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHH
Confidence 469999999996531 1234788999999988887755 4678999999998874 3468999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCchH--------HHHHHHhCCCeE--EecCCeeee----hhhccc--
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGG--------QVELVKEGKPYV--MFGDGKLCA----YCVLSE-- 281 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~--------~~~~~~~g~~~~--~~g~g~~~~----~~~~~~-- 281 (405)
+|.+.|.+++.++.+ ..|++++++|||+++++... ....+....+.. -+...+... .++..+
T Consensus 170 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~ 249 (278)
T 2bgk_A 170 TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESK 249 (278)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccc
Confidence 999999999988764 46999999999999997521 222222211110 011111111 222222
Q ss_pred ccccceEeccCCCCCCCHHHHHHHHHHHc
Q 043385 282 DKINQILPIGGPGKALTPLEQGEILFRLL 310 (405)
Q Consensus 282 ~~~~~~y~i~~~g~~~t~~ela~~l~~~~ 310 (405)
...|++|++.| |..+++.|+++.+.+.+
T Consensus 250 ~~~G~~~~v~g-g~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 250 YVSGLNLVIDG-GYTRTNPAFPTALKHGL 277 (278)
T ss_dssp TCCSCEEEEST-TGGGCCTHHHHHSCSCC
T ss_pred cCCCCEEEECC-cccccCCccchhhhhhc
Confidence 24588999988 48899999998876543
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=199.25 Aligned_cols=170 Identities=16% Similarity=0.099 Sum_probs=119.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++......... ....++.++.+|++|+++++++++.+.
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIV--ADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH--hcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999998765421111111 112468899999999999998887542
Q ss_pred -CCccEEEEcccccC------------CCCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRS------------GGVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~------------~~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~ 222 (405)
+++|+||||||... ..+...+++|+.+ ++.+++.+++.+.++||++||..++.+...|+.+|.
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~Y~asK~ 163 (253)
T 3qiv_A 84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSNYYGLAKV 163 (253)
T ss_dssp HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------CCHH
T ss_pred cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCCchhHHHHH
Confidence 46999999999731 1234578999999 455555566667789999999999988889999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+.+.+.++.+ ..|+++++++||.++++..
T Consensus 164 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 196 (253)
T 3qiv_A 164 GINGLTQQLSRELGGRNIRINAIAPGPIDTEAN 196 (253)
T ss_dssp HHHHHHHHHHHHTTTTTEEEEEEEC--------
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEecCCcccch
Confidence 999999988875 4689999999999998753
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=193.04 Aligned_cols=200 Identities=16% Similarity=0.148 Sum_probs=149.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++.. ..++.++.+|++|+++++++++.+.
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 93 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIER 93 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999876532 1268899999999999998887432
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC-----CChhHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK-----PLLEFQRA 220 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~-----~~~~y~~s 220 (405)
+++|+||||||.... +++..+++|+.|+.++++++ ++.+.++||++||..++. +...|+.+
T Consensus 94 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~s 173 (260)
T 3un1_A 94 FGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLT 173 (260)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHH
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHH
Confidence 469999999997532 23457789999988888876 566778999999987752 44789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch--HHHHHHHhCCCeEEecCCeeee---hhhc-ccccccceEeccC
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG--GQVELVKEGKPYVMFGDGKLCA---YCVL-SEDKINQILPIGG 292 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~--~~~~~~~~g~~~~~~g~g~~~~---~~~~-~~~~~~~~y~i~~ 292 (405)
|.+.+.+.+.++.+ ..|+++++|+||+++++.. ..........++.-++..+... .++. .....|++|++.|
T Consensus 174 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L~~~~~itG~~i~vdG 253 (260)
T 3un1_A 174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYLEHAGFITGEILHVDG 253 (260)
T ss_dssp HHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred HHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHhcccCCCCCcEEEECC
Confidence 99999999998875 4599999999999999863 2233333333332222211111 1221 2334577888876
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=193.95 Aligned_cols=168 Identities=15% Similarity=0.138 Sum_probs=134.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
..+++|+||||||+|+||++++++|+++|++|++++|+.++.... ...+ ..++.++.+|++|+++++++++.+.
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~ 78 (259)
T 4e6p_A 4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQA---AAEI--GPAAYAVQMDVTRQDSIDAAIAATVE 78 (259)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH--CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh--CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999987543210 1111 2468899999999999998887432
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cC-CCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CG-ASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~-v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... +++..+++|+.++.++++++.. .+ .++||++||..++. +...|+.+
T Consensus 79 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 158 (259)
T 4e6p_A 79 HAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCAT 158 (259)
T ss_dssp HSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHH
Confidence 469999999997532 2345678999999888887643 23 46999999998874 35789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+.|.+.+.++.+ ..|+++++|+||.++++..
T Consensus 159 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 193 (259)
T 4e6p_A 159 KAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHW 193 (259)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTH
T ss_pred HHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchh
Confidence 99999999998875 4699999999999999864
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=191.21 Aligned_cols=165 Identities=20% Similarity=0.266 Sum_probs=133.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++++|+||||||+|+||++++++|+++|++|++++|++++.. ......++++++.+|++|+++++++++.. ++
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~ 76 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV------SLAKECPGIEPVCVDLGDWDATEKALGGI-GP 76 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHHHSTTCEEEECCTTCHHHHHHHHTTC-CC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHhccCCCcEEecCCCHHHHHHHHHHc-CC
Confidence 467789999999999999999999999999999999865431 11122346788899999999999998742 46
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cC-CCEEEEEccccccC---CChhHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CG-ASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~-v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
+|+||||||.... +++..+++|+.++.++++++.. .+ .++||++||..++. +...|+.+|...
T Consensus 77 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 156 (244)
T 1cyd_A 77 VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAM 156 (244)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHH
Confidence 8999999996432 2234778999998888877654 35 67999999998874 346899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+++.++.+ ..+++++++|||.++++..
T Consensus 157 ~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~ 187 (244)
T 1cyd_A 157 TMLTKAMAMELGPHKIRVNSVNPTVVLTDMG 187 (244)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBTTHHH
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCcccCccc
Confidence 9999988764 3689999999999999753
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=193.64 Aligned_cols=169 Identities=18% Similarity=0.166 Sum_probs=135.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc--CCcEEEEcCCCCHHHHHHHHHhh
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL--QGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.++++|+||||||+|+||++++++|+++|++|++++|+.++..... ..+... .++.++.+|++|+++++++++.+
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACV---ADLDQLGSGKVIGVQTDVSDRAQCDALAGRA 82 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4577899999999999999999999999999999999876543211 112111 47899999999999998888754
Q ss_pred C---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEcccccc----CCChhHH
Q 043385 159 G---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQ----KPLLEFQ 218 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~----~~~~~y~ 218 (405)
. +++|+||||||.... +++..+++|+.++.++++++.. .+.++||++||.... .+...|+
T Consensus 83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~ 162 (262)
T 3pk0_A 83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYG 162 (262)
T ss_dssp HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHH
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhH
Confidence 2 469999999997532 2334688999998887776644 477899999998764 3457899
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|.+.+.+.+.++.+ ..|+++++|+||.++++.
T Consensus 163 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 198 (262)
T 3pk0_A 163 ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG 198 (262)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcc
Confidence 9999999999998875 469999999999999874
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=195.75 Aligned_cols=210 Identities=17% Similarity=0.152 Sum_probs=154.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc--CCcEEEEcCCCCHHHHHHHHHh
Q 043385 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL--QGASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 80 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
+.++++|+||||||+|+||++++++|+++|++|++++|+.++..... ..+... .++.++.+|++|+++++++++.
T Consensus 36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 112 (293)
T 3rih_A 36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVT---AELGELGAGNVIGVRLDVSDPGSCADAART 112 (293)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH---HHHTTSSSSCEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHHHhhCCCcEEEEEEeCCCHHHHHHHHHH
Confidence 34577899999999999999999999999999999999976643211 122211 3688999999999999888775
Q ss_pred hC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc----CCChhH
Q 043385 158 LG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ----KPLLEF 217 (405)
Q Consensus 158 ~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~----~~~~~y 217 (405)
+. +++|+||||||.... +++..+++|+.|+.++++++ ++.+.++||++||.... .+...|
T Consensus 113 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y 192 (293)
T 3rih_A 113 VVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHY 192 (293)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHH
Confidence 42 578999999997532 23447899999998888876 46677899999998764 345789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch-----HHHHHHHhCCCeEEecCCeeee---hhhcc---cccc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG-----GQVELVKEGKPYVMFGDGKLCA---YCVLS---EDKI 284 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~-----~~~~~~~~g~~~~~~g~g~~~~---~~~~~---~~~~ 284 (405)
+.+|.+.+.+.+.++.+ ..|+++++|+||+++++.. .+...+....++..++...... .++.. ....
T Consensus 193 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~it 272 (293)
T 3rih_A 193 GASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYIT 272 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCC
Confidence 99999999999988875 4699999999999999753 2333444444433333322221 12222 2245
Q ss_pred cceEeccC
Q 043385 285 NQILPIGG 292 (405)
Q Consensus 285 ~~~y~i~~ 292 (405)
|+++++.|
T Consensus 273 G~~i~vdG 280 (293)
T 3rih_A 273 GQAIVVDG 280 (293)
T ss_dssp SCEEEEST
T ss_pred CCEEEECC
Confidence 78888876
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=190.85 Aligned_cols=168 Identities=16% Similarity=0.159 Sum_probs=130.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+.++++++|||||+|+||++++++|+++|++|++++|++++....... + ..++.++.+|++|+++++++++.+.
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~--~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---L--GAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH---h--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999998765422211 1 2368899999999999998887542
Q ss_pred --CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc----------CCCEEEEEcccccc---
Q 043385 160 --TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC----------GASHFVLLSAICVQ--- 211 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~----------~v~~~V~~Ss~~~~--- 211 (405)
+++|+||||||.... ++...+++|+.++.++++++... +.++||++||..++
T Consensus 78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~ 157 (257)
T 3tpc_A 78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ 157 (257)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence 469999999997532 23346789999999888877642 45689999999876
Q ss_pred CCChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 212 KPLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 212 ~~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+...|+.+|.+.+.+.+.++.+ ..|+++++++||.+.++..
T Consensus 158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 201 (257)
T 3tpc_A 158 IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMM 201 (257)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhh
Confidence 34578999999999999888875 4799999999999999863
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=190.69 Aligned_cols=209 Identities=15% Similarity=0.147 Sum_probs=146.1
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++++||||||+|+||++++++|+++|++|++++|+.++.. +.+... ++.++.+|++|+++++++++.+.
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV------TELRQA-GAVALYGDFSCETGIMAFIDLLKT 95 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH------HHHHHH-TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH------HHHHhc-CCeEEECCCCCHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999876431 222222 58899999999999998887542
Q ss_pred --CCccEEEEcccccCC--------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||..++. +...|+.+|.
T Consensus 96 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 175 (260)
T 3gem_A 96 QTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKA 175 (260)
T ss_dssp HCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHH
T ss_pred hcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHH
Confidence 579999999997532 12347789999988877765 445668999999998874 4578999999
Q ss_pred HHHHHHHHHhhh-cCCceEEEEecCCcccCchH---HHHHHHhCCCeEEecCCeeee----hhhcccccccceEeccCCC
Q 043385 223 KFEAEMMKVAEE-DSGFTYSIVRPTAFFKSLGG---QVELVKEGKPYVMFGDGKLCA----YCVLSEDKINQILPIGGPG 294 (405)
Q Consensus 223 ~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~~~---~~~~~~~g~~~~~~g~g~~~~----~~~~~~~~~~~~y~i~~~g 294 (405)
+.+.+.+.++.+ ..++++++|+||.+..+... +........++..+++.+... .++......|+++++.| |
T Consensus 176 a~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~~~~itG~~i~vdG-G 254 (260)
T 3gem_A 176 GLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLDSTYVTGTTLTVNG-G 254 (260)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------CCSCCCCCTHHHHHHHHHHHHCSSCCSCEEEEST-T
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhCCCCCCCEEEECC-C
Confidence 999999998876 34699999999999887432 122222222322222222211 22233445678888876 4
Q ss_pred CCC
Q 043385 295 KAL 297 (405)
Q Consensus 295 ~~~ 297 (405)
..+
T Consensus 255 ~~~ 257 (260)
T 3gem_A 255 RHV 257 (260)
T ss_dssp TTT
T ss_pred ccc
Confidence 443
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=193.14 Aligned_cols=172 Identities=17% Similarity=0.158 Sum_probs=132.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-----ccCCcEEEEcCCCCHHHHHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-----QLQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-----~~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++.......+.... ...++.++.+|++|++++.++++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 4567899999999999999999999999999999998654321100000000 00368899999999999998887
Q ss_pred hhC---CCc-cEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc----C-CCEEEEEcccccc---CCCh
Q 043385 157 NLG---TSI-DVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC----G-ASHFVLLSAICVQ---KPLL 215 (405)
Q Consensus 157 ~~~---~~~-d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~----~-v~~~V~~Ss~~~~---~~~~ 215 (405)
++. +++ |+||||||.... ++...+++|+.++.++++++... + .++||++||..++ .+..
T Consensus 84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 163 (264)
T 2pd6_A 84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQT 163 (264)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBH
T ss_pred HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCCh
Confidence 642 345 999999997532 23347889999999988886543 4 5799999998664 4567
Q ss_pred hHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 216 EFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.|+.+|.+.|.+.+.++.+ ..|++++++|||+++++..
T Consensus 164 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 203 (264)
T 2pd6_A 164 NYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMT 203 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccch
Confidence 8999999999999988764 4699999999999999864
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-23 Score=191.48 Aligned_cols=169 Identities=14% Similarity=0.143 Sum_probs=135.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|+.++.......+. ....++.++.+|++|+++++++++.+.
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR--QAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999998765421111111 112478899999999999988887542
Q ss_pred -CCccEEEEcccccCC--------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||..++. +...|+.+|..
T Consensus 87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 166 (256)
T 3gaf_A 87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAA 166 (256)
T ss_dssp HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHH
Confidence 469999999997532 23447889999988888875 455677999999998874 35789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|+++++++||.+..+.
T Consensus 167 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 197 (256)
T 3gaf_A 167 VNHLTRNIAFDVGPMGIRVNAIAPGAIKTDA 197 (256)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred HHHHHHHHHHHHhhhCcEEEEEEEccccCch
Confidence 99999988875 468999999999999875
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-24 Score=197.68 Aligned_cols=154 Identities=19% Similarity=0.222 Sum_probs=128.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||+||||++++++|+++|++|++++|++++.. . .+.+|++|+++++++++.+.+++|+|
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~-----~~~~D~~~~~~~~~~~~~~~~~~d~v 66 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE----------A-----DLSTPGGRETAVAAVLDRCGGVLDGL 66 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----------C-----CTTSHHHHHHHHHHHHHHHTTCCSEE
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc----------c-----cccCCcccHHHHHHHHHHcCCCccEE
Confidence 58999999999999999999999999999999876532 0 15689999999999988322259999
Q ss_pred EEcccccC--CCCcchhHhHHHHHHHHHHHHHhc----CCCEEEEEccccccCC--------------------------
Q 043385 166 VSCLASRS--GGVKDSWKIDYEANRNSLVAGRNC----GASHFVLLSAICVQKP-------------------------- 213 (405)
Q Consensus 166 v~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~~~----~v~~~V~~Ss~~~~~~-------------------------- 213 (405)
|||||... .++...+++|+.++.++++++.+. +.++||++||..++.+
T Consensus 67 i~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (255)
T 2dkn_A 67 VCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQ 146 (255)
T ss_dssp EECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHH
T ss_pred EECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhcccc
Confidence 99999764 355678999999999999977653 6789999999988743
Q ss_pred ---ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCchH
Q 043385 214 ---LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGG 254 (405)
Q Consensus 214 ---~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~ 254 (405)
...|+.+|.+.|.+++.++.+ ..|++++++|||.++++...
T Consensus 147 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~ 192 (255)
T 2dkn_A 147 GQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ 192 (255)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh
Confidence 346999999999999987764 36999999999999998643
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.2e-23 Score=187.92 Aligned_cols=166 Identities=20% Similarity=0.261 Sum_probs=134.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+.+++++||||||+|+||++++++|+++|++|++++|++++.. ......++++++.+|++|+++++++++.. +
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~ 75 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD------SLVRECPGIEPVCVDLGDWEATERALGSV-G 75 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHHHSTTCEEEECCTTCHHHHHHHHTTC-C
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHHcCCCCEEEEeCCCHHHHHHHHHHc-C
Confidence 3467889999999999999999999999999999999865431 11222346788899999999999998742 4
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cC-CCEEEEEccccccC---CChhHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CG-ASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~-v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
++|+||||||.... .+...+++|+.++.++++++.. .+ .++||++||..++. +...|+.+|.+
T Consensus 76 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 155 (244)
T 3d3w_A 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGA 155 (244)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHH
Confidence 69999999996532 2334788999998887777654 35 68999999998874 45789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.|.+++.++.+ ..+++++++|||.++++..
T Consensus 156 ~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~ 187 (244)
T 3d3w_A 156 LDMLTKVMALELGPHKIRVNAVNPTVVMTSMG 187 (244)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBTTTTH
T ss_pred HHHHHHHHHHHhcccCeEEEEEEeccccccch
Confidence 99999988765 4689999999999999864
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=191.11 Aligned_cols=206 Identities=17% Similarity=0.178 Sum_probs=150.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC-CcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS-GIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~-~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++|+||||||+|+||++++++|+++|++|++++|+.. +.... .+.+. ...++.++.+|++|+++++++++.+.
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAV---VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH---HHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH---HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999888542 22111 11111 12468899999999999998887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||..++ .+...|+.+|.
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 159 (246)
T 3osu_A 80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKA 159 (246)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence 469999999997532 23447899999999988887 55677899999998765 45678999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch-----HHHHHHHhCCCeEEecCCeeee---hhhccc---ccccceEe
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG-----GQVELVKEGKPYVMFGDGKLCA---YCVLSE---DKINQILP 289 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~-----~~~~~~~~g~~~~~~g~g~~~~---~~~~~~---~~~~~~y~ 289 (405)
+.+.+.+.++.+ ..|+++++++||.++++.. .+...+..+.++..++..+... .++..+ ...|++|+
T Consensus 160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~ 239 (246)
T 3osu_A 160 GVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIH 239 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEE
Confidence 999999988875 5799999999999998752 2344445554443333332222 122222 23478888
Q ss_pred ccC
Q 043385 290 IGG 292 (405)
Q Consensus 290 i~~ 292 (405)
+.|
T Consensus 240 vdg 242 (246)
T 3osu_A 240 VNG 242 (246)
T ss_dssp EST
T ss_pred eCC
Confidence 876
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-23 Score=191.72 Aligned_cols=169 Identities=17% Similarity=0.187 Sum_probs=126.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++..... ..+.. ..++.++.+|++|+++++++++.+.
T Consensus 11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECL---SKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999865432111 11111 2368899999999999988886431
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||..++. +...|+.+
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 167 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT 167 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHH
Confidence 469999999996432 22346789999999998887 556788999999998763 45789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|...|.+++.++.+ ..|+++++||||+++++..
T Consensus 168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 202 (266)
T 1xq1_A 168 KGALNQLARNLACEWASDGIRANAVAPAVIATPLA 202 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----
T ss_pred HHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchh
Confidence 99999999988764 4699999999999999863
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-23 Score=190.55 Aligned_cols=167 Identities=14% Similarity=0.113 Sum_probs=132.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++.... ...+. ..+.++.+|++|+++++++++.+.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 78 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM---AAELA--DAARYVHLDVTQPAQWKAAVDTAVTA 78 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHTG--GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHhh--cCceEEEecCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999987543210 01111 247889999999999998887432
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHH----HHHHHHHhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++. .+++.+++.+.++||++||..++. +...|+.+|.
T Consensus 79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 158 (260)
T 1nff_A 79 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF 158 (260)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence 359999999996532 23447889999975 455556667788999999998874 4568999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.|.+.+.++.+ ..|+++++||||+++++..
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 191 (260)
T 1nff_A 159 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT 191 (260)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG
T ss_pred HHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcc
Confidence 999999988765 4699999999999999864
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-23 Score=189.92 Aligned_cols=170 Identities=20% Similarity=0.200 Sum_probs=134.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++..... +.+.. ..++.++.+|++|+++++++++.+.
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV---EDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999865432111 11111 2468999999999999998887431
Q ss_pred --CCccEEEEcccccC-C---------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccccC---CC--hhHH
Q 043385 160 --TSIDVVVSCLASRS-G---------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQK---PL--LEFQ 218 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~-~---------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~~---~~--~~y~ 218 (405)
+++|+||||||... . .+...+++|+.++.++++++.. .+.++||++||..++. +. ..|+
T Consensus 87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~ 166 (260)
T 3awd_A 87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYN 166 (260)
T ss_dssp HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccH
Confidence 46999999999653 1 1234678999999888887653 4678999999988763 22 7899
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCchH
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGG 254 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~ 254 (405)
.+|.+.|.+++.++.+ ..|++++++|||+++++...
T Consensus 167 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~ 204 (260)
T 3awd_A 167 ASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR 204 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence 9999999999988774 36999999999999998643
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-23 Score=190.47 Aligned_cols=169 Identities=17% Similarity=0.170 Sum_probs=133.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++|+||||||+|+||++++++|+++|++|++++|++++..... ..+. ...++.++.+|++|+++++++++.+.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTV---ATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN 87 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999875432111 1111 12368889999999999988877432
Q ss_pred --CCccEEEEcccccC--C--------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRS--G--------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~--~--------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||... . +++..+++|+.++.++++++ ++.+.++||++||..++. +...|+.+
T Consensus 88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 167 (260)
T 2zat_A 88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVS 167 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHH
Confidence 46999999999642 1 23457789999987777765 456778999999998874 45689999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+.+.+.+.++.+ ..|+++++++||.+..++.
T Consensus 168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 202 (260)
T 2zat_A 168 KTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFS 202 (260)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTT
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEECcccCccc
Confidence 99999999988775 4699999999999998863
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=187.56 Aligned_cols=168 Identities=16% Similarity=0.148 Sum_probs=137.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
..+++++||||||+|+||++++++|+++|++|++++|++++.... ...+ ..++.++.+|++|+++++++++.+.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGA---AASV--GRGAVHHVVDLTNEVSVRALIDFTID 81 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHH---HHHH--CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---HHHh--CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999998764311 1111 2478899999999999998887542
Q ss_pred --CCccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHH
Q 043385 160 --TSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQR 219 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~ 219 (405)
+++|+||||||.... .++..+++|+.++.++++++ ++.+.++||++||..++. +...|+.
T Consensus 82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a 161 (271)
T 3tzq_B 82 TFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYAC 161 (271)
T ss_dssp HHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHH
Confidence 469999999997521 12347889999998888877 667778999999998874 4578999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+|.+.+.+.+.++.+ ..|+++++|+||.++++..
T Consensus 162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~ 197 (271)
T 3tzq_B 162 TKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRL 197 (271)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred HHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccc
Confidence 999999999988875 4799999999999999753
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.4e-23 Score=187.11 Aligned_cols=164 Identities=15% Similarity=0.133 Sum_probs=133.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+++|+||||||+|+||++++++|+++|++|++++|++++.. .+....++.++.+|++|+++++++++.+ ++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~ 74 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQ-------ELEKYPGIQTRVLDVTKKKQIDQFANEV-ER 74 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHG-------GGGGSTTEEEEECCTTCHHHHHHHHHHC-SC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-------HHHhccCceEEEeeCCCHHHHHHHHHHh-CC
Confidence 356789999999999999999999999999999999875432 1112247889999999999998777643 46
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC----CChhHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK----PLLEFQRAKLKF 224 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~----~~~~y~~sK~~~ 224 (405)
+|+||||||.... +++..+++|+.++.++++++. +.+.++||++||...+. +...|+.+|.+.
T Consensus 75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~ 154 (246)
T 2ag5_A 75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAV 154 (246)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHH
T ss_pred CCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHH
Confidence 9999999996532 233467899999888877754 45678999999988763 456899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+.+.++.+ ..|+++++||||+++++..
T Consensus 155 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 185 (246)
T 2ag5_A 155 IGLTKSVAADFIQQGIRCNCVCPGTVDTPSL 185 (246)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEESCEECHHH
T ss_pred HHHHHHHHHHhhhcCcEEEEEeeCcCcCcch
Confidence 9999988765 4699999999999999853
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.3e-24 Score=199.23 Aligned_cols=228 Identities=13% Similarity=0.098 Sum_probs=155.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh---
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL--- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--- 158 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++.......+.... ..++.++.+|++|+++++++++.+
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999998754321111111110 247899999999999999888764
Q ss_pred CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh-----cCCCEEEEEcccccc---CCChhHHHHH
Q 043385 159 GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN-----CGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~-----~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
.+++|+||||||.... ++...+++|+.++.++++++.. .+.++||++||..++ .+...|+.+|
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 181 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK 181 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHH
Confidence 2467999999996432 2344788999999888777643 345799999998775 4567899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc-h-H------HHHHHHhCCCeEEecCCeeee----hhhccc--cccc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL-G-G------QVELVKEGKPYVMFGDGKLCA----YCVLSE--DKIN 285 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~-~-~------~~~~~~~g~~~~~~g~g~~~~----~~~~~~--~~~~ 285 (405)
.+.|.+++.++.+ ..|++++++|||.++++. . . ....+..+.+...++..+... .++..+ ...|
T Consensus 182 ~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G 261 (302)
T 1w6u_A 182 AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWING 261 (302)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccCC
Confidence 9999999988774 479999999999999862 1 1 111223332221111111111 112111 1256
Q ss_pred ceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 286 QILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 286 ~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
++|++.| |..+++.++++.+.+..|
T Consensus 262 ~~~~v~g-g~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 262 AVIKFDG-GEEVLISGEFNDLRKVTK 286 (302)
T ss_dssp CEEEEST-THHHHHHSTTGGGGGCCH
T ss_pred CEEEECC-CeeeccCCccccchhhcc
Confidence 7888877 356666666665555443
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=185.93 Aligned_cols=160 Identities=15% Similarity=0.168 Sum_probs=129.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|+||||||+|+||++++++|+++|++|++++|+++.. .. ++.++.+|++|++++.++++.+.
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-----------~~-~~~~~~~D~~d~~~~~~~~~~~~~~ 71 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----------QY-PFATEVMDVADAAQVAQVCQRLLAE 71 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-----------CC-SSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-----------cC-CceEEEcCCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999986521 11 37889999999999998887532
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||..++. +...|+.+|.
T Consensus 72 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 151 (250)
T 2fwm_X 72 TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA 151 (250)
T ss_dssp CSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence 469999999997432 23457889999988888776 556778999999998874 3578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
..|.+.+.++.+ ..|+++++|+||+++++..
T Consensus 152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 184 (250)
T 2fwm_X 152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQ 184 (250)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCC-----
T ss_pred HHHHHHHHHHHHhCccCCEEEEEECCcccCccc
Confidence 999999988765 4699999999999999853
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=9.4e-23 Score=185.16 Aligned_cols=154 Identities=18% Similarity=0.183 Sum_probs=127.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--CCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--TSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--~~~ 162 (405)
+|+||||||+|+||++++++|+++|++|++++|+++ . .++.++.+|++|+++++++++.+. +++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence 578999999999999999999999999999999875 2 245889999999999998887421 258
Q ss_pred cEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc----C------CCEEEEEcccccc---CCChh
Q 043385 163 DVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC----G------ASHFVLLSAICVQ---KPLLE 216 (405)
Q Consensus 163 d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~----~------v~~~V~~Ss~~~~---~~~~~ 216 (405)
|+||||||.... ++...+++|+.++.++++++... + .++||++||..++ .+...
T Consensus 68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 147 (242)
T 1uay_A 68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA 147 (242)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence 999999996532 23456789999999999887653 1 1399999999876 34678
Q ss_pred HHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 217 FQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|+.+|.+.|.+++.++.+ ..|+++++||||.++++.
T Consensus 148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 185 (242)
T 1uay_A 148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL 185 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchh
Confidence 999999999999887764 469999999999999975
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.6e-23 Score=186.64 Aligned_cols=166 Identities=13% Similarity=0.117 Sum_probs=129.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-CCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK-SGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|++ ++.. ..+.. ..++.++.+|++|+++++++++.+.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE------AAIRNLGRRVLTVKCDVSQPGDVEAFGKQVI 77 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHH------HHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHH------HHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999987 4321 11111 2468889999999999988876432
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... +++..+++|+.++.+++++ +++.+.++||++||..++. +...|+.+
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 157 (249)
T 2ew8_A 78 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIST 157 (249)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHH
Confidence 469999999997532 2334778999997666665 6666778999999998874 45789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+.+.+.+.++.+ ..|+++++|+||++.++..
T Consensus 158 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 192 (249)
T 2ew8_A 158 KAANIGFTRALASDLGKDGITVNAIAPSLVRTATT 192 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccc
Confidence 99999999988775 4699999999999998753
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=186.00 Aligned_cols=167 Identities=14% Similarity=0.102 Sum_probs=130.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-h-ccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-N-QLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~-~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++|+||||+|+||++++++|+++|++|++++|++++.... ...+ . ...++.++.+|++|+++++++++.+.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEET---ARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF 78 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999986543211 0111 1 12368899999999999998887431
Q ss_pred CCccEEEEcccccCCC------------CcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 TSIDVVVSCLASRSGG------------VKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~------------~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||..... +...+++|+.++.++++ .+++.+.++||++||..++. +...|+.+
T Consensus 79 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 158 (250)
T 2cfc_A 79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTS 158 (250)
T ss_dssp SCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHH
Confidence 3599999999964321 23467899999765554 44556788999999988763 45789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCchH
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGG 254 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~ 254 (405)
|...|.+++.++.+ ..|++++++|||+++++...
T Consensus 159 K~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~ 194 (250)
T 2cfc_A 159 KGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ 194 (250)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccc
Confidence 99999999988764 45999999999999998643
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=5.1e-23 Score=190.11 Aligned_cols=172 Identities=14% Similarity=0.118 Sum_probs=133.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++.......+.......++.++.+|++|+++++++++.+.
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999875432111111111002468899999999999998887532
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.++.+ +++.+++.+.++||++||..++. +...|+.+|
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 169 (267)
T 1iy8_A 90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK 169 (267)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHH
Confidence 469999999996532 233467899988664 55556666788999999998763 457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.+.++.+ ..|+++++|+||+++++..
T Consensus 170 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 203 (267)
T 1iy8_A 170 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMV 203 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcch
Confidence 9999999988765 4699999999999998753
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.6e-23 Score=189.42 Aligned_cols=169 Identities=15% Similarity=0.179 Sum_probs=134.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++++|+||||||+|+||++++++|+++|++|++++|++++..... +.+.. ..++.++.+|++|+++++++++.+.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAA---RSLKEKFGVRVLEVAVDVATPEGVDAVVESVR 80 (263)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHHHCCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH---HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999865432111 11111 2468899999999999998887432
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||..++. +...|+.+
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 160 (263)
T 3ai3_A 81 SSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVT 160 (263)
T ss_dssp HHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHH
Confidence 469999999996532 23446789999987777765 455778999999998874 35689999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+.+.+.+.++.+ ..|+++++|+||++++|..
T Consensus 161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 195 (263)
T 3ai3_A 161 KAALMMFSKTLATEVIKDNIRVNCINPGLILTPDW 195 (263)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcch
Confidence 99999999988875 4799999999999999863
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.4e-23 Score=189.80 Aligned_cols=169 Identities=12% Similarity=0.148 Sum_probs=132.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc---cCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ---LQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++..... +.+.. ..++.++.+|++|+++++++++.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (260)
T 2z1n_A 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAA---SRIASLVSGAQVDIVAGDIREPGDIDRLFEKA 80 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence 356789999999999999999999999999999999875432111 11111 126889999999999999888743
Q ss_pred C--CCccEEEEcccccCC---------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEccccccC---CChhHHHH
Q 043385 159 G--TSIDVVVSCLASRSG---------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 159 ~--~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
. .++|+||||||.... ++...+++|+.++.+ +++.+++.+.++||++||..++. +...|+.+
T Consensus 81 ~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 160 (260)
T 2z1n_A 81 RDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM 160 (260)
T ss_dssp HHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence 2 129999999996432 234577899999754 44555566788999999998874 35689999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|...+.+.+.++.+ ..|+++++|+||+++++..
T Consensus 161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 195 (260)
T 2z1n_A 161 RLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV 195 (260)
T ss_dssp THHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCC
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchh
Confidence 99999999988765 4699999999999998863
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-22 Score=184.73 Aligned_cols=166 Identities=13% Similarity=0.111 Sum_probs=132.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc-CCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL-QGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++|+||||||+|+||++++++|+++|++|++++|++++.. ...... .++.++.+|++|+++++++++.+.
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~ 82 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQ------AVVAGLENGGFAVEVDVTKRASVDAAMQKAID 82 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHHTCTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999865431 111111 267889999999999998887432
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+ .++||++||..++. +...|+.+
T Consensus 83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 162 (263)
T 3ak4_A 83 ALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSAS 162 (263)
T ss_dssp HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHH
Confidence 469999999996532 234477899999888877664 345 68999999988763 45689999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+.+.+.+.++.+ ..|+++++|+||.++++..
T Consensus 163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 197 (263)
T 3ak4_A 163 KFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQ 197 (263)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHH
T ss_pred HHHHHHHHHHHHHHHhHcCeEEEEEecccccChhh
Confidence 99999999988765 4699999999999999863
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.8e-23 Score=189.93 Aligned_cols=170 Identities=16% Similarity=0.135 Sum_probs=134.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC-cCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG-IRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~-~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.++++++||||||+|+||++++++|+++|++|++++|+... .... ...+. ...++.++.+|++|+++++++++.+
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEV---VAAIAAAGGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH---HHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHH---HHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 35678999999999999999999999999999999985432 1111 11111 1247889999999999999888754
Q ss_pred C---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc---CCChhHHH
Q 043385 159 G---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ---KPLLEFQR 219 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~---~~~~~y~~ 219 (405)
. +++|+||||||.... +++..+++|+.|+.++++++ ++.+.++||++||..++ .+...|+.
T Consensus 101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 180 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSA 180 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHH
Confidence 2 469999999997532 23457889999988877765 45567899999998775 34578999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+|.+.+.+.+.++.+ ..|+++++|+||.+..+..
T Consensus 181 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~ 216 (269)
T 4dmm_A 181 AKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMT 216 (269)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCS
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccc
Confidence 999999999988875 5799999999999999864
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-23 Score=191.42 Aligned_cols=170 Identities=14% Similarity=0.148 Sum_probs=136.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.++++++||||||+|+||++++++|+++|++|++++|+.++..... +.+. ...++.++.+|++|+++++++++.+.
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTV---QEFRNVGHDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH---HHHHHTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3577899999999999999999999999999999999876543211 1111 12478899999999999998887542
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||...+. +...|+.+
T Consensus 99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as 178 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVA 178 (271)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHH
Confidence 579999999997532 23457899999988876655 445667999999988763 45789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+.+.+.+.++.+ ..|+++++|+||.+..+..
T Consensus 179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 213 (271)
T 4ibo_A 179 KGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMN 213 (271)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcch
Confidence 99999999988875 5799999999999999864
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.6e-23 Score=189.66 Aligned_cols=170 Identities=17% Similarity=0.166 Sum_probs=135.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
..+++++||||||+|+||++++++|+++|++|++++|+.++.......+. ....++..+.+|++|+++++++++.+.
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK--QAGLEGRGAVLNVNDATAVDALVESTLK 101 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH--HHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999998765421111111 112468899999999999998887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.++.++++++. +.+.++||++||..++ .+...|+.+|
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (270)
T 3ftp_A 102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAK 181 (270)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHH
Confidence 469999999996532 234578899999888888764 4456799999998776 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 214 (270)
T 3ftp_A 182 AGVAGMTRALAREIGSRGITVNCVAPGFIDTDM 214 (270)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcc
Confidence 9999999988875 469999999999999875
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-22 Score=182.78 Aligned_cols=163 Identities=13% Similarity=0.143 Sum_probs=125.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
++++||||||+|+||++++++|+++|++|++++|++++.. .......++.++.+|++|++++.++++.+. +
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQ------ALAAELEGALPLPGDVREEGDWARAVAAMEEAFG 77 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH------HHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4578999999999999999999999999999999865431 111222378899999999999988887532 4
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHH----HHHHHHHhcCCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
++|+||||||.... ++...+++|+.++. .+++.+++.+.++||++||..++. +...|+.+|...
T Consensus 78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 157 (234)
T 2ehd_A 78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGL 157 (234)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHH
Confidence 68999999996432 22347789999976 455556677788999999998874 456899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.+ ..|++++++|||++..+.
T Consensus 158 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 187 (234)
T 2ehd_A 158 LGLAGAAMLDLREANVRVVNVLPGSVDTGF 187 (234)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEECC------
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 9998887764 469999999999987764
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=186.77 Aligned_cols=159 Identities=18% Similarity=0.147 Sum_probs=130.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.++++++||||||+|+||++++++|+++|++|++++|+.+... ....+.+|++|.+++.++++.+.
T Consensus 24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~~~~ 90 (266)
T 3uxy_A 24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGAVAA 90 (266)
T ss_dssp --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHHHHH
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999876542 22345789999999888776432
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.|+.++++++ ++.+.++||++||..++. +...|+.+|
T Consensus 91 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 170 (266)
T 3uxy_A 91 GLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTK 170 (266)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHH
Confidence 469999999997542 23446789999988888876 566778999999998874 456899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|+||.++++.
T Consensus 171 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 203 (266)
T 3uxy_A 171 AALASLTQCMGMDHAPQGIRINAVCPNEVNTPM 203 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchH
Confidence 9999999988875 469999999999999875
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-23 Score=190.02 Aligned_cols=208 Identities=16% Similarity=0.159 Sum_probs=146.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC-CCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE-KSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++++|+||||||+|+||++++++|+++|++|++++|+ +++..... ..+.. ..++.++.+|++|+++++++++.+.
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETI---ASMRADGGDAAFFAADLATSEACQQLVDEFV 80 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHH---HHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHH---HHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999998 55432111 11111 2368899999999999998887431
Q ss_pred ---CCccEEEEcccc-cCC---------CCcchhHhHHHHHHHHHHHHH----hcC--C---CEEEEEccccccC----C
Q 043385 160 ---TSIDVVVSCLAS-RSG---------GVKDSWKIDYEANRNSLVAGR----NCG--A---SHFVLLSAICVQK----P 213 (405)
Q Consensus 160 ---~~~d~Vv~~a~~-~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~--v---~~~V~~Ss~~~~~----~ 213 (405)
+++|+||||||. ... .+...+++|+.++.++++++. +.+ . ++||++||..++. +
T Consensus 81 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~ 160 (258)
T 3afn_B 81 AKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG 160 (258)
T ss_dssp HHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT
T ss_pred HHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC
Confidence 359999999996 321 133467899999888877653 222 2 6999999987653 4
Q ss_pred ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCchH-----HHHHHHhCCCeEEecCCeeee----hhhccc-
Q 043385 214 LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGG-----QVELVKEGKPYVMFGDGKLCA----YCVLSE- 281 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~-----~~~~~~~g~~~~~~g~g~~~~----~~~~~~- 281 (405)
...|+.+|.+.|.+++.++.+ ..|++++++|||.++++... +...+..+.+...+++.+... .++..+
T Consensus 161 ~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~ 240 (258)
T 3afn_B 161 AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLA 240 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcch
Confidence 578999999999999887764 45999999999999997532 334444444432222222111 122222
Q ss_pred --ccccceEeccC
Q 043385 282 --DKINQILPIGG 292 (405)
Q Consensus 282 --~~~~~~y~i~~ 292 (405)
...|++|++.|
T Consensus 241 ~~~~~G~~~~v~g 253 (258)
T 3afn_B 241 SGYITGQVLDING 253 (258)
T ss_dssp HTTCCSEEEEEST
T ss_pred hccccCCEEeECC
Confidence 23577899876
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=9.4e-23 Score=187.59 Aligned_cols=168 Identities=17% Similarity=0.142 Sum_probs=134.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL-- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-- 158 (405)
++++|+||||||+|+||++++++|+++|++|++++|++++..... ..+.. ..++.++.+|++|+++++++++.+
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCL---TQWRSKGFKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999875432111 11111 236788999999999998888643
Q ss_pred -C-CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHH
Q 043385 159 -G-TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 159 -~-~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
. +++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||..++. +...|+.+
T Consensus 83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 162 (260)
T 2ae2_A 83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGAT 162 (260)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHH
Confidence 1 469999999996532 23447789999988888876 456778999999998763 45789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|...|.+.+.++.+ ..|+++++|+||.+.++.
T Consensus 163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (260)
T 2ae2_A 163 KGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL 196 (260)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHH
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcc
Confidence 99999999988875 458999999999999875
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=186.26 Aligned_cols=164 Identities=17% Similarity=0.216 Sum_probs=132.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++.. ... ..++.++.+|++|.++++++++.+.
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLK-------ALN-LPNTLCAQVDVTDKYTFDTAITRAEKI 84 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHH-------TTC-CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-------Hhh-cCCceEEEecCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999865432 121 1368899999999999998887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.|+.+++++ +++.+.++||++||..++. +...|+.+|.
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~ 164 (266)
T 3p19_A 85 YGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKF 164 (266)
T ss_dssp HCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHH
Confidence 469999999997532 2334688999998885555 4566778999999998874 4578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+.+.+.++.+ ..|+++++|+||.+..+..
T Consensus 165 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 197 (266)
T 3p19_A 165 AVHAISENVREEVAASNVRVMTIAPSAVKTELL 197 (266)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGG
T ss_pred HHHHHHHHHHHHhcccCcEEEEEeeCccccchh
Confidence 999999988875 4799999999999998753
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=183.61 Aligned_cols=163 Identities=15% Similarity=0.141 Sum_probs=131.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|+||||||+|+||++++++|+++|++|++++|++++ . +....... .++.+|++|+++++++++.+.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~------~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-K------EVAEAIGG-AFFQVDLEDERERVRFVEEAAYA 74 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-H------HHHHHHTC-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-H------HHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999998754 2 11111224 789999999999988887532
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+.++||++||..++. +...|+.+|.
T Consensus 75 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 154 (256)
T 2d1y_A 75 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG 154 (256)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence 469999999996532 234578899999888877654 45678999999988763 4578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.|.+.+.++.+ ..|+++++++||.+.++.
T Consensus 155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 186 (256)
T 2d1y_A 155 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEA 186 (256)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEeeCCccCch
Confidence 999999988765 469999999999998875
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=189.26 Aligned_cols=173 Identities=13% Similarity=0.099 Sum_probs=136.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC---------CCchhHhh-hccCCcEEEEcCCCCHHH
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG---------RNDKEETL-NQLQGASVCFSDVTNLES 150 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~---------~~~~~~~~-~~~~~v~~~~~Dl~d~~~ 150 (405)
.++++++||||||+|+||++++++|+++|++|++++|++..... .......+ ....++.++.+|++|+++
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA 85 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 35678999999999999999999999999999999997543110 00000111 112478899999999999
Q ss_pred HHHHHHhhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC--
Q 043385 151 LEKSLENLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK-- 212 (405)
Q Consensus 151 l~~~~~~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~-- 212 (405)
++++++.+. +++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||..++.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 165 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN 165 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC
Confidence 998887542 469999999997532 23457789999988888874 455678999999998874
Q ss_pred -CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 213 -PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 213 -~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+...|+.+|.+.+.+.+.++.| ..|+++++|+||+++++..
T Consensus 166 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 209 (281)
T 3s55_A 166 FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT 209 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence 4578999999999999998876 5699999999999999864
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.6e-23 Score=187.46 Aligned_cols=169 Identities=18% Similarity=0.139 Sum_probs=132.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh--ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN--QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++++++|+||||+|+||++++++|+++|++|++++|++++..... ..+. ...++.++.+|++|+++++++++.+.
T Consensus 4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (248)
T 2pnf_A 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVA---EEIANKYGVKAHGVEMNLLSEESINKAFEEIY 80 (248)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHH---HHHHhhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999865432111 1111 12468899999999999999887431
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEcccccc---CCChhHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQ---KPLLEFQRA 220 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~---~~~~~y~~s 220 (405)
+++|+||||||.... ++...+++|+.++.++++ .+++.+.++||++||..++ .+...|+.+
T Consensus 81 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s 160 (248)
T 2pnf_A 81 NLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTT 160 (248)
T ss_dssp HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHH
Confidence 469999999996532 223478899999865555 4556678899999998654 356789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|...|.+.+.++.+ ..+++++++|||.++++..
T Consensus 161 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~ 195 (248)
T 2pnf_A 161 KAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMT 195 (248)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeceecCchh
Confidence 99999999988764 4689999999999999864
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=188.38 Aligned_cols=167 Identities=15% Similarity=0.125 Sum_probs=132.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEec-CCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR-EKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+++++||||||+|+||++++++|+++|++|++++| ++++.... ...+.. ..++.++.+|++|++++.++++.+.
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~---~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV---VAELKKLGAQGVAIQADISKPSEVVALFDKAV 94 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH---HHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHH---HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999 43322110 011111 2468899999999999998887431
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc---CCCEEEEEcccccc----CCChhHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC---GASHFVLLSAICVQ----KPLLEFQRA 220 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~---~v~~~V~~Ss~~~~----~~~~~y~~s 220 (405)
+++|+||||||.... .+...+++|+.++.++++++... + ++||++||..++ .+...|+.+
T Consensus 95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~Y~~s 173 (274)
T 1ja9_A 95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPNHALYAGS 173 (274)
T ss_dssp HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCSCHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCCCchHHHH
Confidence 359999999996532 12447889999999999988764 4 699999998876 345789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.|.+++.++.+ ..+++++++|||.++++.
T Consensus 174 K~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~ 207 (274)
T 1ja9_A 174 KAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM 207 (274)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 99999999988764 359999999999999875
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=188.00 Aligned_cols=169 Identities=18% Similarity=0.171 Sum_probs=134.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++..... +.+.. ..++.++.+|++|+++++++++.+.
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL---KELREAGVEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999875432111 11111 2468889999999999988887532
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc------CCCEEEEEccccccC---CChhHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC------GASHFVLLSAICVQK---PLLEFQR 219 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~------~v~~~V~~Ss~~~~~---~~~~y~~ 219 (405)
+++|+||||||.... ++...+++|+.++.++++++... +.++||++||..++. +...|+.
T Consensus 96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a 175 (277)
T 2rhc_B 96 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSA 175 (277)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHH
Confidence 469999999996532 23457789999999988886554 567999999998763 4578999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+|.+.+.+.+.++.+ ..|+++++|+||++++++.
T Consensus 176 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 211 (277)
T 2rhc_B 176 SKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 211 (277)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchh
Confidence 999999999988765 4689999999999998753
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-22 Score=185.47 Aligned_cols=171 Identities=15% Similarity=0.181 Sum_probs=133.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++.......+. .....++.++.+|++|+++++++++.+.
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLT-EKYGVETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-HhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999998654321111110 0112467889999999999988887532
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccc-cc---CCChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAIC-VQ---KPLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~-~~---~~~~~y~~sK 221 (405)
+++|+||||||.... .+...+++|+.++.++++++ ++.+.++||++||.. .. .+...|+.+|
T Consensus 97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 176 (267)
T 1vl8_A 97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK 176 (267)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHH
Confidence 469999999997532 22347789999988877765 455678999999987 54 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
...+.+++.++.+ ..|+++++|+||++..+..
T Consensus 177 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 210 (267)
T 1vl8_A 177 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT 210 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeccCccccc
Confidence 9999999988775 4699999999999998863
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=184.10 Aligned_cols=169 Identities=13% Similarity=0.105 Sum_probs=132.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++|+||||+|+||++++++|+++|++|++++|+++.... ....+....++.++.+|++|++++.++++.+.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEK---AAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---HHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHHHhhccCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999998654321 01112112478999999999999998887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHH----HHHHHHhcCC-CEEEEEccccccC---CChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRN----SLVAGRNCGA-SHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~----ll~aa~~~~v-~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... .+...+++|+.++.+ +++.+++.+. ++||++||..++. +...|+.+|
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 159 (251)
T 1zk4_A 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK 159 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHH
Confidence 469999999996532 123477899987655 4555566677 7999999998773 457899999
Q ss_pred HHHHHHHHHHhhh----cCCceEEEEecCCcccCch
Q 043385 222 LKFEAEMMKVAEE----DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 222 ~~~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.|.+++.++.+ ..+++++++|||+++++..
T Consensus 160 ~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~ 195 (251)
T 1zk4_A 160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLV 195 (251)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHH
T ss_pred HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhh
Confidence 9999999887654 4689999999999999753
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.8e-22 Score=181.06 Aligned_cols=158 Identities=15% Similarity=0.200 Sum_probs=130.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++. ..+.++.+|++|+++++++++.+.
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEET 84 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999987653 237889999999999998887642
Q ss_pred -CCccEEEEcccccC---------CCCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccCC---ChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRS---------GGVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQKP---LLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~---------~~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~~---~~~y~~sK~ 222 (405)
+++|+||||||... .+++..+++|+.++.++++++. +.+.++||++||..++.+ ...|+.+|.
T Consensus 85 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 164 (253)
T 2nm0_A 85 HGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKA 164 (253)
T ss_dssp TCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHH
Confidence 56899999999642 2455678999999888777654 446789999999988754 467999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 165 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (253)
T 2nm0_A 165 GLVGFARSLARELGSRNITFNVVAPGFVDTDM 196 (253)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence 999999988775 578999999999998775
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=183.68 Aligned_cols=169 Identities=14% Similarity=0.132 Sum_probs=134.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|+|+||||+|+||++++++|+++|++|++++|+.++......... ....++.++.+|++|+++++++++.+.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMK--EKGFKARGLVLNISDIESIQNFFAEIKAE 79 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999998765421111111 112478999999999999998887652
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+.++||++||...+ .+...|+.+|.
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 159 (247)
T 3lyl_A 80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKA 159 (247)
T ss_dssp TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHH
Confidence 568999999997532 234478899999888877654 3556799999998776 34678999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|+++++++||.+..+.
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 191 (247)
T 3lyl_A 160 GVIGFSKSLAYEVASRNITVNVVAPGFIATDM 191 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEeeCcEeccc
Confidence 999999988875 579999999999999875
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=186.78 Aligned_cols=166 Identities=15% Similarity=0.134 Sum_probs=132.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++|+||||||+|+||++++++|+++|++|++++|++++.... .+.+ ..++.++.+|++|+++++++++.+.
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT---AREL--GDAARYQHLDVTIEEDWQRVVAYAREEF 77 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHTT--GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh--CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 5678999999999999999999999999999999986543210 0111 1357889999999999988887432
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHH----HHHHHHHhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... ++...+++|+.++. .+++.+++.+.++||++||..++. +...|+.+|..
T Consensus 78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 157 (254)
T 1hdc_A 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG 157 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence 469999999996532 23447789999876 566667777788999999998763 45789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.++.+ ..|+++++|+||+++++..
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 189 (254)
T 1hdc_A 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT 189 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecccCcCccc
Confidence 99999988775 4699999999999999753
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=184.48 Aligned_cols=169 Identities=14% Similarity=0.103 Sum_probs=135.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|++|||||+++||+++++.|+++|++|++++|++++.....+.+.. ...++..+.+|++|+++++++++.+.
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~--~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG--MGKEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999987665322222211 12468889999999999998887653
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|++|||||.... +|+..+++|+.++.. +++.+++.+-++||++||..... ....|+.+|
T Consensus 82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asK 161 (254)
T 4fn4_A 82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK 161 (254)
T ss_dssp HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHH
Confidence 789999999996421 344578899998555 45555666778999999998864 346799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..+..+.+.++.| .+||+++.|.||+|-.+.
T Consensus 162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 194 (254)
T 4fn4_A 162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNI 194 (254)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSC
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcc
Confidence 9999999998876 689999999999997663
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-22 Score=184.08 Aligned_cols=160 Identities=16% Similarity=0.152 Sum_probs=131.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
..++|+||||||+|+||++++++|+++|++|++++|+.+... ..+..+.+|++|++++.++++.+.
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV------------NVSDHFKIDVTNEEEVKEAVEKTTKK 78 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT------------TSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc------------CceeEEEecCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999876431 256788999999999998887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... .+...+++|+.++.++++++ ++.+.++||++||..++. +...|+.+|.
T Consensus 79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 158 (269)
T 3vtz_A 79 YGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKH 158 (269)
T ss_dssp HSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHH
Confidence 479999999997532 23346789999988777765 445678999999998874 3578999999
Q ss_pred HHHHHHHHHhhh-cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE-DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+.+.+.++.+ ..++++++|+||.+.++..
T Consensus 159 a~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~ 190 (269)
T 3vtz_A 159 ALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMV 190 (269)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSBCCHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEEECCCcCcch
Confidence 999999998876 3489999999999998753
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=189.53 Aligned_cols=171 Identities=15% Similarity=0.122 Sum_probs=133.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC-CcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHH
Q 043385 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS-GIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 80 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~-~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
+.++++++||||||+|+||++++++|+++|++|++++|+.. ..... ...+.. ..++.++.+|++|+++++++++
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 96 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTV---TDEVAGLSSGTVLHHPADMTKPSEIADMMA 96 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHH---HHHHHTTCSSCEEEECCCTTCHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHH---HHHHhhccCCcEEEEeCCCCCHHHHHHHHH
Confidence 44577899999999999999999999999999999999532 22111 111211 2478899999999999998887
Q ss_pred hhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhH
Q 043385 157 NLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 157 ~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y 217 (405)
.+. +++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||..++. ....|
T Consensus 97 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 176 (281)
T 3v2h_A 97 MVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAY 176 (281)
T ss_dssp HHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred HHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHH
Confidence 542 579999999997532 23457889999988888876 556678999999998874 34789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+|.+.+.+.+.++.+ ..|+++++|+||.+.++..
T Consensus 177 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 214 (281)
T 3v2h_A 177 VAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLV 214 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcch
Confidence 99999999999988875 4689999999999999853
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=186.31 Aligned_cols=168 Identities=17% Similarity=0.172 Sum_probs=134.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++|+||||||+|+||++++++|+++|++|++++|++++..... ..+.. ..++.++.+|++|+++++++++.+.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAK---LEIEQFPGQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHCCSTTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999876542111 11111 2468899999999999998887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH-----HhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG-----RNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa-----~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||...+. +...|+.+
T Consensus 80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 159 (257)
T 3imf_A 80 KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA 159 (257)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHH
Confidence 469999999996432 23457899999988888876 334467999999998874 35679999
Q ss_pred HHHHHHHHHHHhhh---cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE---DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~---~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.+.+.+.++.| ..|+++++|+||.+.++.
T Consensus 160 Kaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~ 194 (257)
T 3imf_A 160 KAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTG 194 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCC
T ss_pred HHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCc
Confidence 99999999988865 359999999999999874
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=188.52 Aligned_cols=168 Identities=16% Similarity=0.137 Sum_probs=134.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.++++++||||||+|+||++++++|+++|++|++++|+.++.... ...+ ..++.++.+|++|+++++++++.+.
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA---ATKI--GCGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHH---HHHH--CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHc--CCcceEEEecCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999987543211 1111 2478999999999999988887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||..++. +...|+.+|
T Consensus 100 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 179 (277)
T 3gvc_A 100 AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSK 179 (277)
T ss_dssp HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHH
Confidence 569999999997532 23457889999987777765 445667999999998874 457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.+.++.+ ..|+++++|+||.++++..
T Consensus 180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 213 (277)
T 3gvc_A 180 AGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ 213 (277)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH
Confidence 9999999988775 5799999999999998753
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=183.68 Aligned_cols=166 Identities=16% Similarity=0.149 Sum_probs=132.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++|||||+|+||++++++|+++|++|++++|++++..... +.+.. ..++.++.+|++|+++++++++.+.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALG---DELTAAGAKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999865432111 11111 2468899999999999988887432
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+ ++||++||..++. +...|+.+|.
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~ 160 (247)
T 2jah_A 82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKF 160 (247)
T ss_dssp HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHH
Confidence 469999999996532 223467899999888877654 445 8999999998774 3568999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|+++++|+||++..+.
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 192 (247)
T 2jah_A 161 GVNAFSETLRQEVTERGVRVVVIEPGTTDTEL 192 (247)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred HHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence 999999888765 569999999999999875
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=185.54 Aligned_cols=167 Identities=14% Similarity=0.116 Sum_probs=129.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEec-CCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR-EKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++|+||||+|+||++++++|+++|++|++++| ++++.... .+.+.. ..++.++.+|++|+++++++++.+.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEV---VDEIKKLGSDAIAVRADVANAEDVTNMVKQTVD 78 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH---HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH---HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999 54432111 111111 2468889999999999998887432
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHH----HHHHHhcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNS----LVAGRNCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~l----l~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.++.++ ++.+++.+.++||++||..++ .+...|+.+|
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 158 (246)
T 2uvd_A 79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAK 158 (246)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHH
Confidence 469999999996532 2345788999995554 445556677899999998765 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...+.+.+.++.+ ..|+++++|+||++..+.
T Consensus 159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 191 (246)
T 2uvd_A 159 AGVIGLTKTSAKELASRNITVNAIAPGFIATDM 191 (246)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEeccccCcc
Confidence 9999998887765 469999999999998764
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=176.77 Aligned_cols=160 Identities=15% Similarity=0.171 Sum_probs=133.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++|++|||||+++||+++++.|+++|++|++++|+.+.... ....++..+.+|++|+++++++++.+ +++
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~~~-g~i 79 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA--------PRHPRIRREELDITDSQRLQRLFEAL-PRL 79 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS--------CCCTTEEEEECCTTCHHHHHHHHHHC-SCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh--------hhcCCeEEEEecCCCHHHHHHHHHhc-CCC
Confidence 579999999999999999999999999999999999876531 11247889999999999999999875 789
Q ss_pred cEEEEcccccCC-------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC---CChhHHHHHHHHHHHH
Q 043385 163 DVVVSCLASRSG-------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK---PLLEFQRAKLKFEAEM 228 (405)
Q Consensus 163 d~Vv~~a~~~~~-------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~~ 228 (405)
|++|||||...+ +|+..+++|+.++..+.++ +++.+ ++||++||..... ....|+.+|..+..+.
T Consensus 80 DiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~lt 158 (242)
T 4b79_A 80 DVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLT 158 (242)
T ss_dssp SEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSCHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCCHHHHHHHHHHHHHH
Confidence 999999997532 3556789999996665554 44444 7999999998763 3468999999999999
Q ss_pred HHHhhh--cCCceEEEEecCCcccCc
Q 043385 229 MKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 229 ~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.++.| .+||+++.|.||++..|.
T Consensus 159 r~lA~Ela~~gIrVNaV~PG~i~T~m 184 (242)
T 4b79_A 159 RSLACEYAAERIRVNAIAPGWIDTPL 184 (242)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCCC-
T ss_pred HHHHHHhhhcCeEEEEEEeCCCCChh
Confidence 998876 689999999999998764
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-22 Score=183.21 Aligned_cols=166 Identities=16% Similarity=0.107 Sum_probs=131.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++|+||||||+|+||++++++|+++|++|++++|+++. ...+.+.. ..++.++.+|++|+++++++++.+.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA-----PALAEIARHGVKAVHHPADLSDVAQIEALFALAERE 76 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCH-----HHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH-----HHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999998651 01122221 2367888999999999998887431
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.++.+ +++.+++.+.++||++||..++. +...|+.+|.
T Consensus 77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 156 (255)
T 2q2v_A 77 FGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKH 156 (255)
T ss_dssp HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHH
Confidence 359999999996532 234477899997554 55556777788999999998874 3578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
..+.+.+.++.+ ..|+++++|+||+++++..
T Consensus 157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 189 (255)
T 2q2v_A 157 GVVGLTKVVGLETATSNVTCNAICPGWVLTPLV 189 (255)
T ss_dssp HHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHH
T ss_pred HHHHHHHHHHHHhcccCcEEEEEeeCCCcCcch
Confidence 999999988875 4689999999999999864
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-22 Score=186.27 Aligned_cols=165 Identities=17% Similarity=0.217 Sum_probs=132.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++.. .......++.++.+|++|+++++++++.+.
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGR------ALEQELPGAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999865432 112223468899999999999998887532
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHh---cCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRN---CGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~---~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.++.++++++.. .+.++||++||.... .....|+.+|.
T Consensus 80 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 159 (270)
T 1yde_A 80 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKG 159 (270)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHH
Confidence 469999999997531 1345788999999988887753 124799999998654 34578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..+.+.+.++.+ ..|+++++|+||+++++.
T Consensus 160 a~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~ 191 (270)
T 1yde_A 160 AVTAMTKALALDESPYGVRVNCISPGNIWTPL 191 (270)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEEeCccccch
Confidence 999999988765 479999999999999975
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-22 Score=184.29 Aligned_cols=167 Identities=16% Similarity=0.161 Sum_probs=130.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCc-EEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGA-SVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++++|+||||+|+||++++++|+++|++|++++|++++.... .+.+ ..++ .++.+|++|+++++++++.+.
T Consensus 8 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (254)
T 2wsb_A 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA---AQEL--GAAVAARIVADVTDAEAMTAAAAEAEA 82 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH--GGGEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh--cccceeEEEEecCCHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999986543210 0111 1245 889999999999988876421
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC---CC--hhHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK---PL--LEFQRA 220 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~---~~--~~y~~s 220 (405)
+++|+||||||.... .+...+++|+.++.++++ .+++.+.++||++||..++. .. ..|+.+
T Consensus 83 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s 162 (254)
T 2wsb_A 83 VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMAS 162 (254)
T ss_dssp HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHH
T ss_pred hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHH
Confidence 469999999996532 123467899999655555 45566788999999988763 23 789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+.|.+++.++.+ ..|++++++|||+++++..
T Consensus 163 K~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~ 197 (254)
T 2wsb_A 163 KGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMT 197 (254)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHH
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhh
Confidence 99999999988764 3599999999999999854
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-22 Score=186.27 Aligned_cols=168 Identities=17% Similarity=0.171 Sum_probs=131.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhh--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENL-- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~-- 158 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++..... +.+. ...++.++.+|++|+++++++++.+
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECL---EIWREKGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999875432111 1111 1246889999999999998888643
Q ss_pred -C-CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHH
Q 043385 159 -G-TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 159 -~-~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
. +++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||..++. +...|+.+
T Consensus 95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 174 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS 174 (273)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHH
Confidence 1 479999999997532 23346789999988888876 455678999999998874 45789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.+.+.+.++.+ ..|+++++|+||+++++.
T Consensus 175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (273)
T 1ae1_A 175 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 208 (273)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCch
Confidence 99999999988765 469999999999999985
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=7.1e-23 Score=187.63 Aligned_cols=165 Identities=14% Similarity=0.141 Sum_probs=130.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++|+||||||+|+||++++++|+++|++|++++|++++.... .+.+ ..++.++.+|++|+++++++++.+.
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL---AAEL--GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH---HHHH--CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHc--CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5678999999999999999999999999999999986543210 0111 2468889999999999988887642
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHH----HHHHHHHhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... ++...+++|+.++. .+++.+++.+ ++||++||..++. +...|+.+|.+
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a 157 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAA 157 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHH
Confidence 468999999997532 23346788988755 4555666667 8999999998874 34689999999
Q ss_pred HHHHHHHHhhh--cC--CceEEEEecCCcccCch
Q 043385 224 FEAEMMKVAEE--DS--GFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 224 ~E~~~~~~~~~--~~--gi~~~ilRp~~v~g~~~ 253 (405)
.|.+.+.++.+ .. |+++++||||+++++..
T Consensus 158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~ 191 (253)
T 1hxh_A 158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM 191 (253)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHH
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchh
Confidence 99999988764 23 89999999999999863
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-22 Score=187.01 Aligned_cols=170 Identities=19% Similarity=0.165 Sum_probs=131.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+.++++|+||||+|+||++++++|+++|++|++++|+........ .+.... ..++.++.+|++|++++.++++.+.
T Consensus 4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 81 (264)
T 3i4f_A 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETM--KETYKDVEERLQFVQADVTKKEDLHKIVEEAMS 81 (264)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH--HHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHH--HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 345689999999999999999999999999999988764321100 011111 1368999999999999998887542
Q ss_pred --CCccEEEEcccc--cCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc-----CCChhH
Q 043385 160 --TSIDVVVSCLAS--RSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ-----KPLLEF 217 (405)
Q Consensus 160 --~~~d~Vv~~a~~--~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~-----~~~~~y 217 (405)
+++|+||||||. ... ++...+++|+.++.++++++ ++.+.++||++||.+.+ .+...|
T Consensus 82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y 161 (264)
T 3i4f_A 82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAF 161 (264)
T ss_dssp HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHH
T ss_pred HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchh
Confidence 469999999993 211 23456889999988888877 66677899999998443 234789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+|.+.+.+.+.++.+ ..|+++++|+||.++++..
T Consensus 162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 199 (264)
T 3i4f_A 162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMK 199 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGG
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccc
Confidence 99999999999988875 4789999999999999863
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.7e-22 Score=180.74 Aligned_cols=163 Identities=17% Similarity=0.179 Sum_probs=130.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++|+|+||||+|+||++++++|+++|++|++++|++++.. ...... ++.++.+|++|+++++++++.+.
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLR------EAAEAV-GAHPVVMDVADPASVERGFAEALAHL 75 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHHTT-TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHHc-CCEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999865431 111222 47889999999999988887642
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc--CCChhHHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ--KPLLEFQRAKLKF 224 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~--~~~~~y~~sK~~~ 224 (405)
+++|+||||||.... +++..+++|+.++.++++++. +.+.++||++||...+ .+...|+.+|...
T Consensus 76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~Y~asK~a~ 155 (245)
T 1uls_A 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGV 155 (245)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCCCchhHHHHHHHH
Confidence 569999999996532 234577899999888877664 3467899999998833 2357899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.+ ..|+++++|+||++..+.
T Consensus 156 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 185 (245)
T 1uls_A 156 VGLTRTLALELGRWGIRVNTLAPGFIETRM 185 (245)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHhHhCeEEEEEEeCcCcCcc
Confidence 9999888765 469999999999998875
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=184.98 Aligned_cols=167 Identities=17% Similarity=0.162 Sum_probs=135.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
..+++|+||||||+|+||++++++|+++|++|++++|++++.... .+.+ ..++.++.+|++|+++++++++.+.
T Consensus 4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (255)
T 4eso_A 4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARI---REEF--GPRVHALRSDIADLNEIAVLGAAAGQ 78 (255)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH--GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh--CCcceEEEccCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999987543211 1111 2368899999999999988876542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... +++..+++|+.++.++++++... .-++||++||...+. +...|+.+|.+
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 158 (255)
T 4eso_A 79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAA 158 (255)
T ss_dssp HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHH
Confidence 579999999997532 23457899999999999998764 235899999998874 45789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 159 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 189 (255)
T 4eso_A 159 LVSFASVLAAELLPRGIRVNSVSPGFIDTPT 189 (255)
T ss_dssp HHHHHHHHHHHTGGGTCEEEEEEECSBCCSS
T ss_pred HHHHHHHHHHHHhhhCcEEEEEecCcccCcc
Confidence 99999988875 469999999999999875
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=187.02 Aligned_cols=170 Identities=18% Similarity=0.243 Sum_probs=133.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++||||||+|+||++++++|+++|++|++++|++++.......+........+.++.+|++|+++++++++.+.
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999999999999865432111111111111347889999999999988887431
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHHHhcCC--CEEEEEcccccc--CC---ChhHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAGRNCGA--SHFVLLSAICVQ--KP---LLEFQR 219 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa~~~~v--~~~V~~Ss~~~~--~~---~~~y~~ 219 (405)
+++|+||||||.... ++...+++|+.+ ++++++.+++.++ ++||++||..++ .+ ...|+.
T Consensus 110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~ 189 (279)
T 1xg5_A 110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA 189 (279)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHH
Confidence 469999999996532 233477899999 7888888888876 799999999887 22 367999
Q ss_pred HHHHHHHHHHHHhhh----cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE----DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~ 252 (405)
+|...+.+.+.++.+ ..++++++|+||++.+++
T Consensus 190 sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~ 226 (279)
T 1xg5_A 190 TKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF 226 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh
Confidence 999999998887764 468999999999999885
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=186.99 Aligned_cols=168 Identities=17% Similarity=0.195 Sum_probs=134.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++..... +.+. ...++.++.+|++|+++++++++.+.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVA---DEIVGAGGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999876542111 1111 12468899999999999988887542
Q ss_pred --CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC-----CChhHH
Q 043385 160 --TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK-----PLLEFQ 218 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~-----~~~~y~ 218 (405)
+++|+||||||.... +++..+++|+.|+.++++++ ++.+.++||++||..++. +...|+
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~ 181 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYT 181 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHH
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHH
Confidence 579999999997421 23457899999988888876 566778999999987753 356899
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 182 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 217 (283)
T 3v8b_A 182 ATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNI 217 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCT
T ss_pred HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCc
Confidence 9999999999998876 578999999999998875
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.7e-22 Score=183.64 Aligned_cols=168 Identities=15% Similarity=0.203 Sum_probs=132.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|.+. .. .....+. ...++.++.+|++|+++++++.+.+.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~---~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VK---EVADEIADGGGSAEAVVADLADLEGAANVAEELAA 103 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HH---HHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HH---HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999997642 11 1111121 12468899999999998887754221
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||..++. +...|+.+|.
T Consensus 104 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 183 (273)
T 3uf0_A 104 TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKH 183 (273)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHH
Confidence 469999999997542 23457889999988887765 456778999999998874 4578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+.+.+.++.+ ..|+++++|+||.++.+..
T Consensus 184 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 216 (273)
T 3uf0_A 184 AVVGLTRALASEWAGRGVGVNALAPGYVVTANT 216 (273)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCch
Confidence 999999998875 4799999999999998764
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-22 Score=184.92 Aligned_cols=171 Identities=13% Similarity=0.077 Sum_probs=135.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|+.++.......+.......++.++.+|++|+++++++++.+.
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999876543221111111112248899999999999988887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+.++||++||...+. ....|+.+|.
T Consensus 85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 164 (265)
T 3lf2_A 85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARA 164 (265)
T ss_dssp HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHH
Confidence 579999999997532 234578999999888888764 44567999999998874 3578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.| ..|+++++|+||.+..+.
T Consensus 165 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 196 (265)
T 3lf2_A 165 GVKNLVRSMAFEFAPKGVRVNGILIGLVESGQ 196 (265)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCcCcCch
Confidence 999999988875 569999999999998864
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-22 Score=186.06 Aligned_cols=167 Identities=15% Similarity=0.138 Sum_probs=130.1
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.++++|+||||||+|+||++++++|+++|++|++++|+.++.... .... ..++.++.+|++|+++++++++.+.
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI---AADL--GKDVFVFSANLSDRKSIKQLAEVAER 97 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH--CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh--CCceEEEEeecCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999987543211 0111 2478999999999999998887432
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.++.+ +++.+++.+.++||++||...+. +...|+.+|
T Consensus 98 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 177 (266)
T 3grp_A 98 EMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAK 177 (266)
T ss_dssp HHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHH
Confidence 469999999997532 344578899999544 55555666778999999988764 347899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~ 210 (266)
T 3grp_A 178 AGLIGFSKALAQEIASRNITVNCIAPGFIKSAM 210 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCch
Confidence 9999999988875 569999999999999874
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-22 Score=188.56 Aligned_cols=166 Identities=15% Similarity=0.159 Sum_probs=138.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.++++++|+||||+|+||++++++|+++|++|++++|+.++.. ..... ..++.++.+|++|+++++++++.+
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~- 84 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGE------AAARTMAGQVEVRELDLQDLSSVRRFADGV- 84 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHTTSSSEEEEEECCTTCHHHHHHHHHTC-
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHH------HHHHHhcCCeeEEEcCCCCHHHHHHHHHhc-
Confidence 3567899999999999999999999999999999999876542 11111 236899999999999999999864
Q ss_pred CCccEEEEcccccC-------CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC----------------CChh
Q 043385 160 TSIDVVVSCLASRS-------GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK----------------PLLE 216 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~-------~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~----------------~~~~ 216 (405)
+++|+||||||... .+++..+++|+.++.++++++.....+|||++||...+. +...
T Consensus 85 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
T 3rd5_A 85 SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLA 164 (291)
T ss_dssp CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHH
T ss_pred CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcch
Confidence 56899999999743 345668999999999999999988778999999988763 2357
Q ss_pred HHHHHHHHHHHHHHHhhh--cCC--ceEEEEecCCcccCch
Q 043385 217 FQRAKLKFEAEMMKVAEE--DSG--FTYSIVRPTAFFKSLG 253 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~--~~g--i~~~ilRp~~v~g~~~ 253 (405)
|+.+|.+.+.+.+.++.+ ..| +++++++||.+..++.
T Consensus 165 Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~ 205 (291)
T 3rd5_A 165 YSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQ 205 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccc
Confidence 999999999999988775 345 9999999999988764
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=190.10 Aligned_cols=168 Identities=15% Similarity=0.192 Sum_probs=132.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cC---CcEEEEcCCCCHHHHHHHHHh
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQ---GASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~---~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
.+++|+||||||+|+||++++++|+++|++|++++|++++..... ..+.. .. ++.++.+|++|+++++++++.
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 99 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK---QQILKAGVPAEKINAVVADVTEASGQDDIINT 99 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCCCceEEEEecCCCCHHHHHHHHHH
Confidence 467789999999999999999999999999999999875432111 11111 12 578999999999999888874
Q ss_pred hC---CCccEEEEcccccCCC-----------CcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC----CCh
Q 043385 158 LG---TSIDVVVSCLASRSGG-----------VKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK----PLL 215 (405)
Q Consensus 158 ~~---~~~d~Vv~~a~~~~~~-----------~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~----~~~ 215 (405)
+. +++|+||||||..... ++..+++|+.++.++++++. +.+ ++||++||..++. +..
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~ 178 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYP 178 (297)
T ss_dssp HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSH
T ss_pred HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcc
Confidence 32 4699999999964321 23477899999888777654 345 7999999988763 346
Q ss_pred hHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 216 EFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.|+.+|.+.+.+.+.++.+ ..|+++++|+||++.++..
T Consensus 179 ~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~ 218 (297)
T 1xhl_A 179 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM 218 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccc
Confidence 7999999999999988765 5799999999999999863
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-22 Score=186.19 Aligned_cols=171 Identities=15% Similarity=0.147 Sum_probs=134.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+.+++|+||||||+|+||++++++|+++|++|++++|+.++.......+........+..+.+|++|++.++++++.+ +
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-g 84 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY-P 84 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC-C
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc-C
Confidence 456789999999999999999999999999999999987654321111111111235778899999999999988863 5
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHH----HHHHHhcCCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNS----LVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~l----l~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
++|+||||||.... ++++.+++|+.++.++ ++.+++.+.++||++||..++. +...|+.+|.+.
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 164 (267)
T 3t4x_A 85 KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQ 164 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHH
Confidence 79999999997532 2334679999995555 4455566778999999998874 457899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 165 ~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 194 (267)
T 3t4x_A 165 LSLSRSLAELTTGTNVTVNTIMPGSTLTEG 194 (267)
T ss_dssp HHHHHHHHHHTTTSEEEEEEEEECCBCCHH
T ss_pred HHHHHHHHHHhCCCCeEEEEEeCCeecCcc
Confidence 9999998875 468999999999998874
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=183.17 Aligned_cols=165 Identities=10% Similarity=0.099 Sum_probs=131.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-------NVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
+|+||||||+|+||++++++|+++|+ +|++++|++++.... ...+.. ..++.++.+|++|++++.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKI---SLECRAEGALTDTITADISDMADVRRLTT 78 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHH---HHHHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHH---HHHHHccCCeeeEEEecCCCHHHHHHHHH
Confidence 57899999999999999999999999 999999986543211 011111 2357899999999999998887
Q ss_pred hhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhH
Q 043385 157 NLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 157 ~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y 217 (405)
.+. +++|+||||||.... ++...+++|+.++.++++++. +.+.++||++||..++. +...|
T Consensus 79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y 158 (244)
T 2bd0_A 79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIY 158 (244)
T ss_dssp HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchh
Confidence 532 469999999997532 233477899999988888764 45678999999998874 45789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.|.+++.++.+ ..|++++++|||+++++.
T Consensus 159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (244)
T 2bd0_A 159 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 195 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchh
Confidence 99999999999877654 579999999999999985
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=184.68 Aligned_cols=168 Identities=17% Similarity=0.098 Sum_probs=131.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC-cCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG-IRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~-~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++|+||||||+|+||++++++|+++|++|++++|++++ ..... +.+.. ..++.++.+|++|+++++++++.+.
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 78 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR---AGLAAQHGVKVLYDGADLSKGEAVRGLVDNAV 78 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH---HHHHHHHTSCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH---HHHHhccCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999998754 32111 11111 2368889999999999988887532
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||..++. +...|+.+
T Consensus 79 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 158 (260)
T 1x1t_A 79 RQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAA 158 (260)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHH
Confidence 469999999996532 23447789999988777765 345678999999998763 45789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|...+.+.+.++.+ ..|+++++|+||++.++..
T Consensus 159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 193 (260)
T 1x1t_A 159 KHGVVGFTKVTALETAGQGITANAICPGWVRTPLV 193 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred HHHHHHHHHHHHHHhccCCEEEEEEeecCccCchH
Confidence 99999999988765 4699999999999999863
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.4e-22 Score=180.37 Aligned_cols=144 Identities=18% Similarity=0.313 Sum_probs=114.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+++|+||||||+|+||++++++|+++| ++|++++|++++... +. ..+++++.+|++|++++.+++++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-------~~-~~~~~~~~~Dl~d~~~~~~~~~~---- 88 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-------PY-PTNSQIIMGDVLNHAALKQAMQG---- 88 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-------SC-CTTEEEEECCTTCHHHHHHHHTT----
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-------cc-cCCcEEEEecCCCHHHHHHHhcC----
Confidence 456789999999999999999999999 899999999876431 11 14789999999999999999998
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCCh------------hHHHHHHHHHHHHH
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLL------------EFQRAKLKFEAEMM 229 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~------------~y~~sK~~~E~~~~ 229 (405)
+|+||||++... ....++++++++++.++++||++||.++|.+.. .+...+..+|+.++
T Consensus 89 ~D~vv~~a~~~~---------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 159 (236)
T 3qvo_A 89 QDIVYANLTGED---------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIE 159 (236)
T ss_dssp CSEEEEECCSTT---------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHH
T ss_pred CCEEEEcCCCCc---------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHH
Confidence 999999998532 124578999999999999999999999884321 12344555666654
Q ss_pred HHhhhcCCceEEEEecCCcccCc
Q 043385 230 KVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 230 ~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
. .|+++++||||+++++.
T Consensus 160 ~-----~gi~~~~vrPg~i~~~~ 177 (236)
T 3qvo_A 160 A-----SGLEYTILRPAWLTDED 177 (236)
T ss_dssp T-----SCSEEEEEEECEEECCS
T ss_pred H-----CCCCEEEEeCCcccCCC
Confidence 3 89999999999999864
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=187.43 Aligned_cols=168 Identities=17% Similarity=0.166 Sum_probs=133.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++||||||+|+||++++++|+++|++|++++|+.++..... +.+. ...++.++.+|++|+++++++++.+.
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV---DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999876542111 1111 12478899999999999988887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh------cCCCEEEEEccccccC---CChhHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN------CGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~------~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... .++..+++|+.|+.++++++.. .+.++||++||..++. +...|+.+
T Consensus 99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as 178 (279)
T 3sju_A 99 FGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTAS 178 (279)
T ss_dssp HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHH
Confidence 579999999997542 2344678999999888887644 5667999999998874 45789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+.+.+.+.++.+ ..|+++++|+||.+..+..
T Consensus 179 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~ 213 (279)
T 3sju_A 179 KHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMA 213 (279)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHH
T ss_pred HHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHH
Confidence 99999999988875 4689999999999988753
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=184.72 Aligned_cols=169 Identities=15% Similarity=0.133 Sum_probs=133.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh--ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN--QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+..+.... .+.+. ...++.++.+|++|+++++++++.+.
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 87 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEV---TEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID 87 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHH---HHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHH---HHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999976543211 11111 12478899999999999998887642
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cC-CCEEEEEccccccCC---------
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CG-ASHFVLLSAICVQKP--------- 213 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~-v~~~V~~Ss~~~~~~--------- 213 (405)
+++|+||||||.... ++...+++|+.++.++++++.. .+ .++||++||..++.+
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~ 167 (265)
T 1h5q_A 88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL 167 (265)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccc
Confidence 569999999997532 1234678999999988887654 23 479999999877632
Q ss_pred -ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 214 -LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 214 -~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
...|+.+|.+.|.+++.++.+ ..|++++++|||+++++..
T Consensus 168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 210 (265)
T 1h5q_A 168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT 210 (265)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccc
Confidence 568999999999999988764 4689999999999999863
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-22 Score=184.98 Aligned_cols=166 Identities=20% Similarity=0.175 Sum_probs=132.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAI-AREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++||||||+|+||++++++|+++|++|+++ .|+.+...... ..+.. ..++.++.+|++|+++++++++.+.
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETA---EEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH---HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999987 67654432111 11111 2478999999999999998887642
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||...+. +...|+.+|.
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 159 (258)
T 3oid_A 80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKA 159 (258)
T ss_dssp HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHH
Confidence 568999999996432 23447899999988887776 555677999999998874 4578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 160 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 191 (258)
T 3oid_A 160 ALEALTRYLAVELSPKQIIVNAVSGGAIDTDA 191 (258)
T ss_dssp HHHHHHHHHHHHTGGGTEEEEEEEECCBCSGG
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEeeCCCcChh
Confidence 999999998875 468999999999998875
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=185.34 Aligned_cols=171 Identities=15% Similarity=0.096 Sum_probs=135.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
..+++++||||||+|+||++++++|+++|++|++++|+.++.......+.. ....++.++.+|++|+++++++++.+.
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG-ATGRRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-HHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999987543211111111 112478999999999999988887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.++.++++++. +.+.++||++||..++ .....|+.+|
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAK 181 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHH
T ss_pred HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence 579999999996432 234578999999998888763 3445799999998876 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|+||++.++.
T Consensus 182 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 214 (277)
T 4fc7_A 182 AAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTE 214 (277)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSH
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEECCEecch
Confidence 9999999988875 468999999999999874
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=184.50 Aligned_cols=171 Identities=15% Similarity=0.181 Sum_probs=131.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++++|||||+|+||++++++|+++|++|++++|+.++.......+.... ...++.++.+|++|.++++++++.+.
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999998765432221111111 11578899999999999988887542
Q ss_pred --CCccEEEEcccccCC--------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||...+. +...|+.+|.
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 163 (250)
T 3nyw_A 84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKF 163 (250)
T ss_dssp HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHH
T ss_pred hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHH
Confidence 579999999997532 23457789999988877766 455678999999988763 4678999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|+++++|+||++..+.
T Consensus 164 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 195 (250)
T 3nyw_A 164 ALLGLAESLYRELAPLGIRVTTLCPGWVNTDM 195 (250)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecCcccCch
Confidence 999999988875 469999999999998764
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.88 E-value=6e-23 Score=182.01 Aligned_cols=157 Identities=18% Similarity=0.217 Sum_probs=128.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|+||||+|+||++++++|+++ +|++++|++++.. ........ +++.+|++|++++.++++. .+++|+|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~------~~~~~~~~-~~~~~D~~~~~~~~~~~~~-~~~id~v 70 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALA------ELAREVGA-RALPADLADELEAKALLEE-AGPLDLL 70 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHH------HHHHHHTC-EECCCCTTSHHHHHHHHHH-HCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHH------HHHHhccC-cEEEeeCCCHHHHHHHHHh-cCCCCEE
Confidence 57999999999999999999998 9999999865431 11111122 8889999999999999982 1249999
Q ss_pred EEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---CCChhHHHHHHHHHHHHHHHhh
Q 043385 166 VSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKLKFEAEMMKVAE 233 (405)
Q Consensus 166 v~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E~~~~~~~~ 233 (405)
|||||.... ++...+++|+.++.++++++++.+.++||++||..++ .+...|+.+|...|.+++.++.
T Consensus 71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~ 150 (207)
T 2yut_A 71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARK 150 (207)
T ss_dssp EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHH
Confidence 999996532 2334788999999999999977778899999999876 3557899999999999998876
Q ss_pred h--cCCceEEEEecCCcccCc
Q 043385 234 E--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 234 ~--~~gi~~~ilRp~~v~g~~ 252 (405)
+ ..|++++++|||.++++.
T Consensus 151 ~~~~~gi~v~~v~pg~v~t~~ 171 (207)
T 2yut_A 151 ELLREGVHLVLVRLPAVATGL 171 (207)
T ss_dssp HHHTTTCEEEEECCCCBCSGG
T ss_pred HHhhhCCEEEEEecCcccCCC
Confidence 4 479999999999999985
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-22 Score=185.41 Aligned_cols=170 Identities=18% Similarity=0.155 Sum_probs=132.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
..+++++||||||+|+||++++++|+++|++|++++|+.++.......+. ....++.++.+|++|++++.++++.+.
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV--AAGGEAESHACDLSHSDAIAAFATGVLA 102 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--HhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 34677899999999999999999999999999999998765421111111 112468899999999999998887642
Q ss_pred --CCccEEEEcccccC-C---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRS-G---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~-~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||... . ++...+++|+.++.++++++ ++.+.++||++||..++. +...|+.+
T Consensus 103 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 182 (262)
T 3rkr_A 103 AHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTAS 182 (262)
T ss_dssp HHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHH
T ss_pred hcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHH
Confidence 57999999999721 1 23447889999988877765 446678999999998874 34789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|++.+.+++.++.+ ..|+++++++||.+..+.
T Consensus 183 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~ 216 (262)
T 3rkr_A 183 KWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF 216 (262)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCc
Confidence 99999999988765 479999999999998764
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=183.39 Aligned_cols=224 Identities=16% Similarity=0.157 Sum_probs=154.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
..+++++||||||+|+||++++++|+++|++|++++|+.++.......+. ....++.++.+|++|.++++++++.+.
T Consensus 27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLR--GQGFDAHGVVCDVRHLDEMVRLADEAFR 104 (301)
T ss_dssp CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--hcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 34678899999999999999999999999999999998765432111111 112478999999999999998887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcC-CCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCG-ASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~-v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... ++...+++|+.|+.++++++ ++.+ .++||++||..++. +...|+.+
T Consensus 105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 184 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVA 184 (301)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHH
Confidence 469999999997532 23447889999988888875 3444 56999999998874 35789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCC
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALT 298 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t 298 (405)
|.+.+.+.+.++.+ ..|+++++|+||.+..+...-..... ... .+.... .....+ ..... +..++
T Consensus 185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~---~~~~~~------~~~~~~-~~~~~--~~~~~ 251 (301)
T 3tjr_A 185 KYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIR-GAD---YGMSAT------PEGAFG-PLPTQ--DESVS 251 (301)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----------------------------------CCC
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEECCcccccccccccccc-chh---hccccC------hhhhcc-ccccc--cCCCC
Confidence 99999999888775 46899999999999988643221110 000 000000 000000 00111 15678
Q ss_pred HHHHHHHHHHHcCCCCCeeec
Q 043385 299 PLEQGEILFRLLGKEPKFLKV 319 (405)
Q Consensus 299 ~~ela~~l~~~~g~~~~~~~~ 319 (405)
..|+++.+.+.+..+..++..
T Consensus 252 pedvA~~i~~~l~~~~~~i~~ 272 (301)
T 3tjr_A 252 ADDVARLTADAILANRLYILP 272 (301)
T ss_dssp HHHHHHHHHHHHHHTCSEECC
T ss_pred HHHHHHHHHHHHhcCCeEEec
Confidence 999999999887655444433
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-22 Score=185.73 Aligned_cols=174 Identities=16% Similarity=0.115 Sum_probs=134.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC----------CCchhHhhh-ccCCcEEEEcCCCCH
Q 043385 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG----------RNDKEETLN-QLQGASVCFSDVTNL 148 (405)
Q Consensus 80 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~----------~~~~~~~~~-~~~~v~~~~~Dl~d~ 148 (405)
+..+++++||||||+|+||++++++|+++|++|++++|+...... .......+. ...++.++.+|++|+
T Consensus 10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD 89 (280)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence 345778999999999999999999999999999999985321110 000001111 124688899999999
Q ss_pred HHHHHHHHhhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcC-CCEEEEEcccccc
Q 043385 149 ESLEKSLENLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCG-ASHFVLLSAICVQ 211 (405)
Q Consensus 149 ~~l~~~~~~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~-v~~~V~~Ss~~~~ 211 (405)
++++++++.+. +++|+||||||.... +++..+++|+.++.++++++ ++.+ .++||++||..++
T Consensus 90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 169 (280)
T 3pgx_A 90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL 169 (280)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc
Confidence 99998887542 579999999997532 23447789999988887776 3444 5689999999887
Q ss_pred C---CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 212 K---PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 212 ~---~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
. ....|+.+|.+.+.+.+.++.+ ..|+++++|+||+++++..
T Consensus 170 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 216 (280)
T 3pgx_A 170 KATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI 216 (280)
T ss_dssp SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCccc
Confidence 4 3568999999999999988875 5799999999999999863
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.4e-22 Score=184.82 Aligned_cols=167 Identities=13% Similarity=0.082 Sum_probs=134.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++++||||||+|+||++++++|+++|++|++++|+.++.... ... ...++.++.+|++|+++++++++.+.
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV---ANE--IGSKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---HHH--HCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHH--hCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999987543210 011 12468899999999999998887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... .++..+++|+.|+.++++++ ++.+.++||++||..++. +...|+.+|
T Consensus 98 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 177 (277)
T 4dqx_A 98 KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASK 177 (277)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHH
Confidence 469999999996432 23446789999987777765 455667999999998874 357899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 178 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 210 (277)
T 4dqx_A 178 GAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY 210 (277)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCch
Confidence 9999999988875 468999999999998875
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-22 Score=182.41 Aligned_cols=163 Identities=15% Similarity=0.209 Sum_probs=127.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|+.+.. ...+ ..++.++.+|++|+++++++++.+.
T Consensus 6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~ 77 (257)
T 3tl3_A 6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV------VADL--GDRARFAAADVTDEAAVASALDLAETM 77 (257)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH------HHHT--CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH------HHhc--CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 46788999999999999999999999999999999954321 1111 2478999999999999988877321
Q ss_pred CCccEEEEcccccC-------------CCCcchhHhHHHHHHHHHHHHHh------------cCCCEEEEEccccccCC-
Q 043385 160 TSIDVVVSCLASRS-------------GGVKDSWKIDYEANRNSLVAGRN------------CGASHFVLLSAICVQKP- 213 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~-------------~~~~~~~~~n~~g~~~ll~aa~~------------~~v~~~V~~Ss~~~~~~- 213 (405)
+++|+||||||... .+++..+++|+.++.++++++.. .+-++||++||...+.+
T Consensus 78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 157 (257)
T 3tl3_A 78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ 157 (257)
T ss_dssp SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence 46999999999632 13456789999998888887654 23458999999998854
Q ss_pred --ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 214 --LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 214 --~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...|+.+|.+.+.+.+.++.| ..|+++++|+||.+..+.
T Consensus 158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 200 (257)
T 3tl3_A 158 IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPL 200 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChh
Confidence 357999999999999988875 568999999999999875
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.3e-22 Score=174.85 Aligned_cols=146 Identities=23% Similarity=0.289 Sum_probs=124.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||+|+||++++++|+ +|++|++++|++. .+.+|++|+++++++++++ +++|+|
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~-~~~d~v 62 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV-GKVDAI 62 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH-CCEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh-CCCCEE
Confidence 589999999999999999999 9999999999753 3679999999999999874 568999
Q ss_pred EEcccccCCC---------CcchhHhHHHHHHHHHHHHHhc---CCCEEEEEccccccC---CChhHHHHHHHHHHHHHH
Q 043385 166 VSCLASRSGG---------VKDSWKIDYEANRNSLVAGRNC---GASHFVLLSAICVQK---PLLEFQRAKLKFEAEMMK 230 (405)
Q Consensus 166 v~~a~~~~~~---------~~~~~~~n~~g~~~ll~aa~~~---~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~~~~ 230 (405)
|||||..... +...+++|+.++.++++++.+. + ++||++||..++. +...|+.+|...|.+++.
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~ 141 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKS 141 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHH
Confidence 9999965321 2245689999999999998876 4 6999999988764 446899999999999999
Q ss_pred Hhhh-cCCceEEEEecCCcccCch
Q 043385 231 VAEE-DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 231 ~~~~-~~gi~~~ilRp~~v~g~~~ 253 (405)
++.+ ..|++++++|||+++++..
T Consensus 142 ~~~e~~~gi~v~~v~pg~v~~~~~ 165 (202)
T 3d7l_A 142 AAIEMPRGIRINTVSPNVLEESWD 165 (202)
T ss_dssp HTTSCSTTCEEEEEEECCBGGGHH
T ss_pred HHHHccCCeEEEEEecCccCCchh
Confidence 8864 3599999999999999864
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.9e-22 Score=182.09 Aligned_cols=167 Identities=15% Similarity=0.188 Sum_probs=133.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++|+||||+|+||++++++|+++|++|++++|+.++.... .+.+ ..++.++.+|++|+++++++++.+.
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ---AKKL--GNNCVFAPADVTSEKDVQTALALAKGK 83 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHH---HHHH--CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHH---HHHh--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999987654211 1111 2468999999999999998887432
Q ss_pred -CCccEEEEcccccCC---------------CCcchhHhHHHHHHHHHHHHHhc----------CCCEEEEEcccccc--
Q 043385 160 -TSIDVVVSCLASRSG---------------GVKDSWKIDYEANRNSLVAGRNC----------GASHFVLLSAICVQ-- 211 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------------~~~~~~~~n~~g~~~ll~aa~~~----------~v~~~V~~Ss~~~~-- 211 (405)
+++|+||||||.... .+...+++|+.++.++++++... +.++||++||..++
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 163 (265)
T 2o23_A 84 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG 163 (265)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred CCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC
Confidence 359999999996532 12346789999999988887654 56799999999876
Q ss_pred -CCChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 212 -KPLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 212 -~~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+...|+.+|.+.+.+.+.++.+ ..|+++++|+||++.++..
T Consensus 164 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 208 (265)
T 2o23_A 164 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL 208 (265)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccc
Confidence 34578999999999999888765 4689999999999998753
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=184.64 Aligned_cols=169 Identities=12% Similarity=0.105 Sum_probs=131.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEec-CCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR-EKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++++++||||||+|+||++++++|+++|++|++++| ++++.... .+.+.. ..++.++.+|++|++++.++++.+.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~---~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV---LEEIKKVGGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH---HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHH---HHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999 54332110 011111 2357889999999999988887431
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccC---CChhHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQK---PLLEFQR 219 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~---~~~~y~~ 219 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+ .++||++||...+. +...|+.
T Consensus 81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~ 160 (261)
T 1gee_A 81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA 160 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHH
Confidence 359999999996532 223477899999887776654 445 67999999998763 4568999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+|.+.|.+.+.++.+ ..+++++++|||+++++..
T Consensus 161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 196 (261)
T 1gee_A 161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN 196 (261)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchh
Confidence 999999998887764 4689999999999999864
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-22 Score=184.74 Aligned_cols=167 Identities=14% Similarity=0.140 Sum_probs=130.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc---cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ---LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++++||||||+|+||++++++|+++|++|++++|+.++.... ...+.. ..++.++.+|++|+++++++++.+.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQC---KAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVV 81 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999986543210 011111 1357889999999999998887642
Q ss_pred ---CCccEEEEcccccC-CCCcchhHhHHHH----HHHHHHHHHhcC---CCEEEEEccccccC---CChhHHHHHHHHH
Q 043385 160 ---TSIDVVVSCLASRS-GGVKDSWKIDYEA----NRNSLVAGRNCG---ASHFVLLSAICVQK---PLLEFQRAKLKFE 225 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~-~~~~~~~~~n~~g----~~~ll~aa~~~~---v~~~V~~Ss~~~~~---~~~~y~~sK~~~E 225 (405)
+++|+||||||... .++.+.+++|+.+ ++++++.+++.+ .++||++||..++. +...|+.+|.+.+
T Consensus 82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 161 (267)
T 2gdz_A 82 DHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIV 161 (267)
T ss_dssp HHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHH
Confidence 46899999999753 4567788999886 455666666553 57999999998874 3467999999999
Q ss_pred HHHHHHh--hh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVA--EE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~--~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.++ .+ ..|+++++|+||.+.++.
T Consensus 162 ~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~ 192 (267)
T 2gdz_A 162 GFTRSAALAANLMNSGVRLNAICPGFVNTAI 192 (267)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred HHHHHHHHHHHhccCCcEEEEEecCcCcchh
Confidence 9988742 22 579999999999998874
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-22 Score=182.39 Aligned_cols=169 Identities=16% Similarity=0.221 Sum_probs=128.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|+.++.......+.. ...++.++.+|++|+++++++++.+.
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA--AGGRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH--TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 46788999999999999999999999999999999988765322111111 12468899999999999988887432
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... ++...+++|+.|+.++++++ ++.+.++||++||..++. ....|+.+|.+
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 161 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFG 161 (252)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHH
T ss_pred CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHH
Confidence 368999999997532 23447889999987766655 556667999999998764 45789999999
Q ss_pred HHHHHHHHhhh--cCCceE-EEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTY-SIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~-~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|+++ +++.||.+..++
T Consensus 162 ~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~ 193 (252)
T 3h7a_A 162 LRAVAQSMARELMPKNIHVAHLIIDSGVDTAW 193 (252)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred HHHHHHHHHHHhhhcCCEEEEEecCCccCChh
Confidence 99999988875 468999 899999998764
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=179.22 Aligned_cols=158 Identities=14% Similarity=0.182 Sum_probs=128.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|++++.. .+..+.+|++|+++++++++.+.
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEEH 78 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-------------HhcCeeccCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999876542 12238899999999988887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.++.++++++. +.+.++||++||..++ .+...|+.+|.
T Consensus 79 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 158 (247)
T 1uzm_A 79 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA 158 (247)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHH
Confidence 468999999997532 234578899999888877664 4567899999999776 34578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|+++++|+||++..+.
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 190 (247)
T 1uzm_A 159 GVIGMARSIARELSKANVTANVVAPGYIDTDM 190 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEeCCCcccc
Confidence 999999988775 469999999999998875
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.9e-22 Score=181.13 Aligned_cols=167 Identities=17% Similarity=0.176 Sum_probs=124.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAI-AREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++||||||+|+||++++++|+++|++|+++ .|+++..... .+.+. ...++.++.+|++|+++++++++.+.
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDAT---AEEFKAAGINVVVAKGDVKNPEDVENMVKTAMD 79 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHH---HHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHH---HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999 5554432111 11111 12468899999999999998887431
Q ss_pred --CCccEEEEcccccC---------CCCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRS---------GGVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~---------~~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||||... .++...+++|+.++.++++++. +.+.++||++||.... .+...|+.+|
T Consensus 80 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 159 (247)
T 2hq1_A 80 AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASK 159 (247)
T ss_dssp HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHH
Confidence 36999999999643 2355688999999777776654 4577899999998654 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.|.+++.++.+ ..++++++++||.+.++.
T Consensus 160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (247)
T 2hq1_A 160 AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDM 192 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccc
Confidence 9999999988764 468999999999998864
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.1e-22 Score=186.97 Aligned_cols=171 Identities=19% Similarity=0.211 Sum_probs=129.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCC-Cchh-Hhh-hccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGR-NDKE-ETL-NQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~-~~~~-~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++++||||||+|+||++++++|+++|++|++++|+....... .... +.. ....++.++.+|++|++++.++++.+.
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999975322100 0000 111 112478999999999999998887542
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC----CChhHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK----PLLEFQR 219 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~----~~~~y~~ 219 (405)
+++|+||||||.... ++...+++|+.|+.++++++ ++.+.++||++||..++. ....|+.
T Consensus 83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~a 162 (324)
T 3u9l_A 83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFA 162 (324)
T ss_dssp HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHH
Confidence 469999999996532 23447799999999888877 667788999999998762 2467999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+|.++|.+.+.++.+ ..|+++++|+||.|.++..
T Consensus 163 sKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~ 198 (324)
T 3u9l_A 163 AKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN 198 (324)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence 999999999988875 4799999999999987643
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=191.89 Aligned_cols=173 Identities=11% Similarity=0.044 Sum_probs=131.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.++++++||||||+|+||++++++|+++|++|++++|+.++.......+........+.++.+|++|++++.++++.+.
T Consensus 4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 3467889999999999999999999999999999999876543221111111111268899999999999999887642
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc----------CCCEEEEEccccccC---CCh
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC----------GASHFVLLSAICVQK---PLL 215 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~----------~v~~~V~~Ss~~~~~---~~~ 215 (405)
+++|+||||||.... ++...+++|+.|+.++++++... +.++||++||..++. ...
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~ 163 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPG 163 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSH
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCH
Confidence 578999999996432 23457899999988888876432 356899999998874 346
Q ss_pred hHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 216 EFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.|+.+|.+++.+.+.++.+ ..|+++++|+||.|.+++.
T Consensus 164 ~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 203 (319)
T 3ioy_A 164 IYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIY 203 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcc
Confidence 7999999888887776654 4689999999999998764
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-22 Score=184.85 Aligned_cols=166 Identities=12% Similarity=0.136 Sum_probs=129.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
++ ++||||||+|+||++++++|+++|++|++++|++++.... ...+....++.++.+|++|+++++++++.+.
T Consensus 20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 95 (272)
T 2nwq_A 20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQAL---AGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEF 95 (272)
T ss_dssp -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 44 7899999999999999999999999999999986543211 1111111368899999999999999998753
Q ss_pred CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHH----HHHhcCCC-EEEEEccccccC---CChhHHHHH
Q 043385 160 TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLV----AGRNCGAS-HFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~----aa~~~~v~-~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.++.++++ .+++.+.+ +||++||..++. +...|+.+|
T Consensus 96 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asK 175 (272)
T 2nwq_A 96 ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTK 175 (272)
T ss_dssp SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHH
Confidence 568999999997531 233477899999665554 44566777 999999998874 346899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 176 aa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 208 (272)
T 2nwq_A 176 AFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208 (272)
T ss_dssp HHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence 9999999998875 468999999999999875
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=186.71 Aligned_cols=166 Identities=17% Similarity=0.135 Sum_probs=130.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEec-CCCCcCCCCchhHhhhc--cCCcEEEEcCCCCH----HHHHHHH
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR-EKSGIRGRNDKEETLNQ--LQGASVCFSDVTNL----ESLEKSL 155 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~----~~l~~~~ 155 (405)
+++++||||||+|+||++++++|+++|++|++++| ++++..... +.+.. ..++.++.+|++|+ +++++++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 85 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV---AELNAARAGSAVLCKGDLSLSSSLLDCCEDII 85 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH---HHHHHHSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH---HHHHHhcCCceEEEeccCCCccccHHHHHHHH
Confidence 46789999999999999999999999999999999 654332111 11111 24688999999999 8888887
Q ss_pred HhhC---CCccEEEEcccccCC--------------------CCcchhHhHHHHHHHHHHHHHhc---CC------CEEE
Q 043385 156 ENLG---TSIDVVVSCLASRSG--------------------GVKDSWKIDYEANRNSLVAGRNC---GA------SHFV 203 (405)
Q Consensus 156 ~~~~---~~~d~Vv~~a~~~~~--------------------~~~~~~~~n~~g~~~ll~aa~~~---~v------~~~V 203 (405)
+.+. +++|+||||||.... .+...+++|+.++.++++++... +. ++||
T Consensus 86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv 165 (276)
T 1mxh_A 86 DCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV 165 (276)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEE
Confidence 7432 469999999996431 12346789999999999988763 44 7999
Q ss_pred EEccccccC---CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 204 LLSAICVQK---PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 204 ~~Ss~~~~~---~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
++||..++. +...|+.+|.+.+.+.+.++.+ ..|+++++|+||.++++
T Consensus 166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 999998874 3568999999999999988765 46999999999999988
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-22 Score=185.64 Aligned_cols=169 Identities=14% Similarity=0.145 Sum_probs=134.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++.......+. ....++.++.+|++|+++++++++.+.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVT--DTGRRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHH--hcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999998765432111111 112478899999999999998887542
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+ ++||++||...+. +...|+.+|
T Consensus 86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK 164 (264)
T 3ucx_A 86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAK 164 (264)
T ss_dssp TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHH
Confidence 579999999986421 234478899999888887753 334 7999999998874 456899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.+.++.+ ..|+++++|+||+++++..
T Consensus 165 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 198 (264)
T 3ucx_A 165 SALLAMSQTLATELGEKGIRVNSVLPGYIWGGTL 198 (264)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHH
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEecCccccccH
Confidence 9999999988875 5799999999999998753
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=180.39 Aligned_cols=157 Identities=18% Similarity=0.164 Sum_probs=129.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++|+||||||+|+||++++++|+++|++|++++|++++ ..++.++.+|++|+++++++++.+.
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 72 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEY 72 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 567899999999999999999999999999999998653 1367899999999999998887532
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+.++||++||..++. +...|+.+|.+
T Consensus 73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 152 (264)
T 2dtx_A 73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHA 152 (264)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHH
Confidence 469999999996432 234578899999777777654 45678999999998874 45789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.++.+ .. +++++|+||.+.++..
T Consensus 153 ~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~ 183 (264)
T 2dtx_A 153 VIGLTKSIALDYAPL-LRCNAVCPATIDTPLV 183 (264)
T ss_dssp HHHHHHHHHHHHTTT-SEEEEEEECSBCSHHH
T ss_pred HHHHHHHHHHHhcCC-cEEEEEEeCCCcCcch
Confidence 99999988865 34 9999999999988753
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.88 E-value=8.9e-23 Score=193.67 Aligned_cols=234 Identities=15% Similarity=0.105 Sum_probs=156.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC-------cCCCCchhHhhhc-cCCcEEEEcCCCCHHHHH
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG-------IRGRNDKEETLNQ-LQGASVCFSDVTNLESLE 152 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~-------~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~ 152 (405)
..+++++||||||+|+||++++++|+++|++|++++|+... ........+.+.. ..++.++.+|++|++++.
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 102 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA 102 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 34678999999999999999999999999999999987210 0000111111211 236788999999999998
Q ss_pred HHHHhhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcC----------CCEEEEEccccc
Q 043385 153 KSLENLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCG----------ASHFVLLSAICV 210 (405)
Q Consensus 153 ~~~~~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~----------v~~~V~~Ss~~~ 210 (405)
++++.+. +++|+||||||.... ++...+++|+.++.++++++...- -++||++||..+
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~ 182 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG 182 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence 8887542 469999999997542 234578999999988888764321 159999999877
Q ss_pred c---CCChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCchH-HH-HHHHhCCCeEEecCCeeee---hhhcc
Q 043385 211 Q---KPLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLGG-QV-ELVKEGKPYVMFGDGKLCA---YCVLS 280 (405)
Q Consensus 211 ~---~~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~~-~~-~~~~~g~~~~~~g~g~~~~---~~~~~ 280 (405)
+ .+...|+.+|.+.+.+.+.++.+ ..|+++++|+|| +..+... .. ............+...... .++..
T Consensus 183 ~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~~~~~~~~~~pedva~~v~~L~s 261 (322)
T 3qlj_A 183 LQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQDQDFDAMAPENVSPLVVWLGS 261 (322)
T ss_dssp HHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------CCTTCGGGTHHHHHHHTS
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhccccccCCCCHHHHHHHHHHHhC
Confidence 6 34578999999999999988875 479999999999 6554321 00 0000000000001111111 12222
Q ss_pred c---ccccceEeccCCCC-----------------CCCHHHHHHHHHHHcCCCCCe
Q 043385 281 E---DKINQILPIGGPGK-----------------ALTPLEQGEILFRLLGKEPKF 316 (405)
Q Consensus 281 ~---~~~~~~y~i~~~g~-----------------~~t~~ela~~l~~~~g~~~~~ 316 (405)
+ ...|++|++.| |. .+++.|+++.+.+.+|.+.+.
T Consensus 262 ~~~~~itG~~i~vdG-G~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~ 316 (322)
T 3qlj_A 262 AEARDVTGKVFEVEG-GKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARPP 316 (322)
T ss_dssp GGGGGCCSCEEEEET-TEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCCC
T ss_pred ccccCCCCCEEEECC-CccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCCC
Confidence 1 23577887766 33 347899999999998865443
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=183.19 Aligned_cols=167 Identities=22% Similarity=0.208 Sum_probs=134.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++++|||||+|+||++++++|+++|++|++++|++++.... .+.+. ..+..+.+|++|+++++++++.+.
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAI---SDYLG--DNGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---HHHHG--GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHhc--ccceEEEEeCCCHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999987543211 11111 256889999999999998887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.++.++++++. +.+.++||++||...+ .+...|+.+|
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (248)
T 3op4_A 80 EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAK 159 (248)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence 469999999997532 234578999999888877764 4567899999998775 4567899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 160 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 192 (248)
T 3op4_A 160 AGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 192 (248)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTT
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCch
Confidence 9999999988875 569999999999998875
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-21 Score=181.14 Aligned_cols=168 Identities=17% Similarity=0.126 Sum_probs=133.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|+.++.......... ...++.++.+|++|+++++++++.+.
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT--YGVHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHH--HCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999987653211111111 12468899999999999988887542
Q ss_pred -CCccEEEEcccccCC------C-----CcchhHhHHHH----HHHHHHHHHhcCCCEEEEEccccccCC-----ChhHH
Q 043385 160 -TSIDVVVSCLASRSG------G-----VKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQKP-----LLEFQ 218 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~------~-----~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~~~-----~~~y~ 218 (405)
+++|+||||||.... . +...+++|+.+ ++++++.+++.+.++||++||..++.+ ...|+
T Consensus 109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~ 188 (279)
T 3ctm_A 109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYN 188 (279)
T ss_dssp HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHH
T ss_pred hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHH
Confidence 469999999996532 1 12367899999 678888888888899999999987643 46799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|...|.+++.++.+ ..+ ++++++||++..+.
T Consensus 189 ~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~ 223 (279)
T 3ctm_A 189 TAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDI 223 (279)
T ss_dssp HHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTT
T ss_pred HHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccc
Confidence 9999999999998875 357 99999999998875
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=185.38 Aligned_cols=204 Identities=15% Similarity=0.166 Sum_probs=151.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL-- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-- 158 (405)
++++++||||||+|+||++++++|+++|++|++++|++++..... ..+.. ..++.++.+|++|+++++++++.+
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA---AKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH---HHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999875432111 11111 246899999999999998888754
Q ss_pred -CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccCC---ChhHHHHH
Q 043385 159 -GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQKP---LLEFQRAK 221 (405)
Q Consensus 159 -~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~~---~~~y~~sK 221 (405)
.+++|+||||||.... ++...+++|+.++.+++++ +++.+.++||++||..++.+ ...|+.+|
T Consensus 105 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 184 (272)
T 1yb1_A 105 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK 184 (272)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred HCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence 2469999999997542 1234778999996665555 45567889999999988854 35799999
Q ss_pred HHHHHHHHHHhhh-----cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCC
Q 043385 222 LKFEAEMMKVAEE-----DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKA 296 (405)
Q Consensus 222 ~~~E~~~~~~~~~-----~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~ 296 (405)
.+.|.+++.++.+ ..|+++++|+||++.++... . . . . .+ + ..
T Consensus 185 ~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~-------~-------~------~---~-------~~-~--~~ 231 (272)
T 1yb1_A 185 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK-------N-------P------S---T-------SL-G--PT 231 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT-------C-------T------H---H-------HH-C--CC
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc-------c-------c------c---c-------cc-c--CC
Confidence 9999999988765 35899999999999887521 0 0 0 0 01 1 45
Q ss_pred CCHHHHHHHHHHHcCCCCCeeecCh
Q 043385 297 LTPLEQGEILFRLLGKEPKFLKVPI 321 (405)
Q Consensus 297 ~t~~ela~~l~~~~g~~~~~~~~p~ 321 (405)
.+..|+++.+...+..+...+.+|.
T Consensus 232 ~~~~dva~~i~~~~~~~~~~~~~~~ 256 (272)
T 1yb1_A 232 LEPEEVVNRLMHGILTEQKMIFIPS 256 (272)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCHHHHHHHHHHHHHcCCCEEECCc
Confidence 6789999999888766655555553
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-22 Score=185.38 Aligned_cols=168 Identities=16% Similarity=0.181 Sum_probs=132.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cC---CcEEEEcCCCCHHHHHHHHHh
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQ---GASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~---~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++..... +.+.. .. ++.++.+|++|+++++++++.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETR---QIILKSGVSEKQVNSVVADVTTEDGQDQIINS 79 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHHcCCCCcceEEEEecCCCHHHHHHHHHH
Confidence 356789999999999999999999999999999999875432111 11111 11 578899999999999888875
Q ss_pred hC---CCccEEEEcccccCCC-------------CcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccccC----C
Q 043385 158 LG---TSIDVVVSCLASRSGG-------------VKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQK----P 213 (405)
Q Consensus 158 ~~---~~~d~Vv~~a~~~~~~-------------~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~~----~ 213 (405)
+. +++|+||||||..... +...+++|+.++.++++++.. .+ ++||++||..++. +
T Consensus 80 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~ 158 (280)
T 1xkq_A 80 TLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPD 158 (280)
T ss_dssp HHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCS
T ss_pred HHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCc
Confidence 42 4699999999965321 234678999998888877653 35 7999999998763 3
Q ss_pred ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 214 LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
...|+.+|.+.+.+.+.++.+ ..|+++++|+||+++++..
T Consensus 159 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 200 (280)
T 1xkq_A 159 FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFT 200 (280)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcc
Confidence 467999999999999988765 5799999999999999853
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-22 Score=182.06 Aligned_cols=170 Identities=16% Similarity=0.150 Sum_probs=133.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCC--CCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV--TNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~~~l~~~~~~~~ 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++.......+... ...++.++.+|+ +|.++++++++.+.
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE-TGRQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-HSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-cCCCceEEEEecccCCHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999876543211111111 123688999999 99999888877542
Q ss_pred ---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHH
Q 043385 160 ---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQR 219 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~ 219 (405)
+++|+||||||.... .++..+++|+.++.++++++ ++.+.++||++||...+. +...|+.
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a 167 (252)
T 3f1l_A 88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAA 167 (252)
T ss_dssp HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHH
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHH
Confidence 579999999997421 12447899999988888776 556778999999998774 4568999
Q ss_pred HHHHHHHHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
+|.+.+.+.+.++.+ ...+++++|.||++..+.
T Consensus 168 sK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~ 201 (252)
T 3f1l_A 168 SKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM 201 (252)
T ss_dssp HHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch
Confidence 999999999998876 233999999999998764
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=183.10 Aligned_cols=165 Identities=13% Similarity=0.137 Sum_probs=127.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCcCCCCchhHhhhc-cCCcEE-EEcCCCCHHHHHHHHHhhC--
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAI-AREKSGIRGRNDKEETLNQ-LQGASV-CFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~~-~~~v~~-~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++|+||||+|+||++++++|+++|++|+++ +|++++..... +.+.. ..++.. +.+|++|.++++++++.+.
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVA---EEARRRGSPLVAVLGANLLEAEAATALVHQAAEV 77 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHH---HHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999998 77754432110 11111 235666 8999999999988876431
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHH----HHHHHHHHHhcCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEA----NRNSLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g----~~~ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.+ ++.+++.+++.+.++||++||..++ .+...|+.+|.
T Consensus 78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 157 (245)
T 2ph3_A 78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKA 157 (245)
T ss_dssp HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHH
Confidence 469999999996532 233477899999 5556666667788899999998654 35678999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.|.+.+.++.+ ..|++++++|||.++++.
T Consensus 158 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 189 (245)
T 2ph3_A 158 GLIGFTRAVAKEYAQRGITVNAVAPGFIETEM 189 (245)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEEEEeecCcc
Confidence 999999888764 358999999999999875
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=184.81 Aligned_cols=169 Identities=14% Similarity=0.114 Sum_probs=132.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++|+||||||+|+||++++++|+++|++|++++|+.++..... ..+.. ..++.++.+|++|+++++++++.+.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAE---ASVREKGVEARSYVCDVTSEEAVIGTVDSVVR 80 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999865432111 11111 2368889999999999988887542
Q ss_pred --CCccEEEEccccc-CC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASR-SG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~-~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.. .. ++...+++|+.++.++++++. +.+.++||++||..++. +...|+.+
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 160 (262)
T 1zem_A 81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTS 160 (262)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHH
Confidence 4699999999965 21 234577899999888777654 34667999999987763 34689999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|...+.+.+.++.+ ..|+++++|+||++..+..
T Consensus 161 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 195 (262)
T 1zem_A 161 KGAIIALTETAALDLAPYNIRVNAISPGYMGPGFM 195 (262)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHH
T ss_pred HHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchh
Confidence 99999998888765 5699999999999988753
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=178.04 Aligned_cols=165 Identities=16% Similarity=0.126 Sum_probs=127.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|+||||+|+||++++++|+++| ++|++++|+.++... .... ...++.++.+|++|++++.++++.+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~----l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----LKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH----HHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH----HHhc-cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999999 999999998765421 1111 12478999999999999988887432
Q ss_pred -C--CccEEEEcccccC-C---------CCcchhHhHHHHHHHHHHHHHh----c------C-----CCEEEEEcccccc
Q 043385 160 -T--SIDVVVSCLASRS-G---------GVKDSWKIDYEANRNSLVAGRN----C------G-----ASHFVLLSAICVQ 211 (405)
Q Consensus 160 -~--~~d~Vv~~a~~~~-~---------~~~~~~~~n~~g~~~ll~aa~~----~------~-----v~~~V~~Ss~~~~ 211 (405)
+ ++|+||||||... . .+...+++|+.++.++++++.. . + .++||++||..++
T Consensus 77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 156 (250)
T 1yo6_A 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence 2 5999999999754 1 1234778999998888877643 2 4 6899999998775
Q ss_pred C----------CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 212 K----------PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 212 ~----------~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
. +...|+.+|...|.+++.++.+ ..|+++++++||++..+..
T Consensus 157 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 210 (250)
T 1yo6_A 157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210 (250)
T ss_dssp STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----
T ss_pred cCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCC
Confidence 2 4468999999999999988764 3589999999999988753
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=5e-22 Score=183.03 Aligned_cols=166 Identities=18% Similarity=0.153 Sum_probs=129.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
++++||||||+|+||++++++|+++|++|++++|+.++..... ..+.. ..++.++.+|++|+++++++++.+.
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIA---TEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999999876543211 11111 2467889999999999988887542
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... ++...+++|+.|+.++++++ ++.+.++||++||..++. ....|+.+|.+
T Consensus 80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 159 (264)
T 3tfo_A 80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFA 159 (264)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHH
Confidence 579999999997532 23457789999987666654 455678999999998874 35679999999
Q ss_pred HHHHHHHHhhhcCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+..|+++++|+||.+..++
T Consensus 160 l~~l~~~la~e~~gIrvn~v~PG~v~T~~ 188 (264)
T 3tfo_A 160 VRAISDGLRQESTNIRVTCVNPGVVESEL 188 (264)
T ss_dssp HHHHHHHHHHHCSSEEEEEEEECCC----
T ss_pred HHHHHHHHHHhCCCCEEEEEecCCCcCcc
Confidence 99999999886459999999999998875
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.8e-22 Score=182.10 Aligned_cols=165 Identities=16% Similarity=0.204 Sum_probs=131.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC--cCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG--IRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~--~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+|+||||||+|+||++++++|+++|++|++++|+.++ .... ...+.. ..++.++.+|++|+++++++++.+.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAET---IKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEK 78 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHH---HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHH---HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998754 2111 111111 2468899999999999988887432
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cCC-CEEEEEccccccC---CChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CGA-SHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~v-~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... ++...+++|+.++.++++++.. .+. ++||++||..++. +...|+.+|
T Consensus 79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 158 (258)
T 3a28_C 79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTK 158 (258)
T ss_dssp HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHH
Confidence 469999999997532 2344788999998887777654 466 8999999998763 457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...+.+.+.++.+ ..|+++++|+||++..+.
T Consensus 159 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 191 (258)
T 3a28_C 159 FAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM 191 (258)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHH
T ss_pred HHHHHHHHHHHHHHHhhCeEEEEEECCccCChh
Confidence 9999999988765 469999999999998875
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.3e-22 Score=184.20 Aligned_cols=169 Identities=14% Similarity=0.217 Sum_probs=132.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh---
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL--- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--- 158 (405)
++++++|+||||+|+||++++++|+++|++|++++|++++.... .+.+....++.++.+|++|+++++++++.+
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADT---ATRLSAYGDCQAIPADLSSEAGARRLAQALGEL 102 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH---HHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHh
Confidence 35678999999999999999999999999999999987543211 112222226788899999999998888754
Q ss_pred CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCC----CEEEEEccccccC---CCh-hH
Q 043385 159 GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGA----SHFVLLSAICVQK---PLL-EF 217 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v----~~~V~~Ss~~~~~---~~~-~y 217 (405)
.+++|+||||||.... +++..+++|+.++.++++++ ++.+. ++||++||..++. ... .|
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y 182 (276)
T 2b4q_A 103 SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAY 182 (276)
T ss_dssp CSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCcccc
Confidence 2469999999996432 23357889999986666654 44454 7999999998874 234 89
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+|.+.+.+.+.++.+ ..|+++++|+||.+..+..
T Consensus 183 ~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~ 220 (276)
T 2b4q_A 183 GPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMT 220 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTT
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcch
Confidence 99999999999988765 4699999999999998864
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=181.64 Aligned_cols=170 Identities=16% Similarity=0.111 Sum_probs=134.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|+||||||+|+||++++++|+++|++|++++|+.++.......+. ....++.++.+|++|+++++++++.+.
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIA--GVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHH--HTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999998765432111111 112478899999999999999887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCC-CEEEEEccccccC-----CChhHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGA-SHFVLLSAICVQK-----PLLEFQR 219 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v-~~~V~~Ss~~~~~-----~~~~y~~ 219 (405)
+++|+||||||.... +++..+++|+.++.++++++. +.+. ++||++||...+. +...|+.
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~a 186 (276)
T 3r1i_A 107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCT 186 (276)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHH
Confidence 469999999997542 233467899999888777654 3343 6899999987752 3478999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+|.+.+.+.+.++.+ ..|+++++|+||+|..+..
T Consensus 187 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~ 222 (276)
T 3r1i_A 187 SKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELV 222 (276)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTT
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence 999999999998875 4799999999999998753
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=183.03 Aligned_cols=170 Identities=14% Similarity=0.211 Sum_probs=135.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..+++++||||||+|+||++++++|+++|++|++++|+.+...... .+.. ....++.++.+|++|+++++++++.+.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANET--KQYVEKEGVKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH--HHHHHTTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH--HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999865321000 0111 112478899999999999988887542
Q ss_pred ---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 ---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.++.++++++... ..++||++||..++ .+...|+.+|
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 200 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATK 200 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHH
Confidence 569999999996531 23457899999999999998764 23599999999876 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|+||.++++.
T Consensus 201 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 233 (291)
T 3ijr_A 201 GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL 233 (291)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTH
T ss_pred HHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCc
Confidence 9999999988875 469999999999999986
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-22 Score=182.83 Aligned_cols=166 Identities=17% Similarity=0.155 Sum_probs=134.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|+||||||+|+||++++++|+++|++|++++|+.++.... ...+ ..++.++.+|++|+++++++++.+.
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAA---AASI--GKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH---HHHH--CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999987543210 1111 2478899999999999998887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcC-CCEEEEEcccccc---CCChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCG-ASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~-v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.++.+++++ +++.+ .++||++||...+ .+...|+.+|
T Consensus 78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 157 (247)
T 3rwb_A 78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK 157 (247)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence 469999999997532 2345789999998887776 55555 6799999998776 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 190 (247)
T 3rwb_A 158 GGVIGFTRALATELGKYNITANAVTPGLIESDG 190 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcc
Confidence 9999999988875 479999999999998763
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=183.86 Aligned_cols=174 Identities=14% Similarity=0.122 Sum_probs=134.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC---------CCchhHhhh-ccCCcEEEEcCCCCHH
Q 043385 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG---------RNDKEETLN-QLQGASVCFSDVTNLE 149 (405)
Q Consensus 80 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~---------~~~~~~~~~-~~~~v~~~~~Dl~d~~ 149 (405)
+..++++++|||||+|+||++++++|+++|++|++++|++..... .......+. ...++.++.+|++|++
T Consensus 23 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 102 (299)
T 3t7c_A 23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFD 102 (299)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence 345778999999999999999999999999999999998432100 000011111 1247889999999999
Q ss_pred HHHHHHHhhC---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHh----c-CCCEEEEEcccccc
Q 043385 150 SLEKSLENLG---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRN----C-GASHFVLLSAICVQ 211 (405)
Q Consensus 150 ~l~~~~~~~~---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~----~-~v~~~V~~Ss~~~~ 211 (405)
+++++++.+. +++|+||||||.... +++..+++|+.++.++++++.. . +.++||++||...+
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~ 182 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL 182 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence 9998887542 579999999996532 1245789999998888877543 3 35799999999887
Q ss_pred C---CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 212 K---PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 212 ~---~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
. ....|+.+|.+.+.+.+.++.+ ..|+++++|+||+|..+..
T Consensus 183 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 229 (299)
T 3t7c_A 183 RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPML 229 (299)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccc
Confidence 4 4578999999999999988875 4699999999999998863
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.8e-22 Score=185.53 Aligned_cols=170 Identities=14% Similarity=0.142 Sum_probs=126.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-CCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK-SGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
..+++++||||||+|+||++++++|+++|++|++++|+. +..... ...+. ...++.++.+|++|+++++++++.+
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 101 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPV---IAELSGLGARVIFLRADLADLSSHQATVDAV 101 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHH---HHHHHHTTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHH---HHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 346678999999999999999999999999999999743 322111 11111 1247899999999999998888754
Q ss_pred C---CCccEEEEccccc--C---------CCCcchhHhHHHHHHHHHHHHH----hcC---CCEEEEEccccccC---CC
Q 043385 159 G---TSIDVVVSCLASR--S---------GGVKDSWKIDYEANRNSLVAGR----NCG---ASHFVLLSAICVQK---PL 214 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~--~---------~~~~~~~~~n~~g~~~ll~aa~----~~~---v~~~V~~Ss~~~~~---~~ 214 (405)
. +++|+||||||.. . .++...+++|+.++.++++++. +.+ .++||++||..++. +.
T Consensus 102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~ 181 (280)
T 4da9_A 102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER 181 (280)
T ss_dssp HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC
T ss_pred HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc
Confidence 2 4699999999972 1 1234577899999887777654 333 46999999988763 45
Q ss_pred hhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 215 LEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 215 ~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
..|+.+|.+.+.+.+.++.+ ..|+++++|+||.+..+..
T Consensus 182 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 222 (280)
T 4da9_A 182 LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMT 222 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCch
Confidence 78999999999999988875 5799999999999998753
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=3e-21 Score=180.74 Aligned_cols=171 Identities=14% Similarity=0.138 Sum_probs=134.6
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..+++++||||||+|+||++++++|+++|++|++++|+..... ......... ...++.++.+|++|+++++++++.+.
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEED-AQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR 123 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHH-HHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhH-HHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999998743210 000001111 12468889999999999988887542
Q ss_pred ---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhcCC--CEEEEEccccccC---CChhHHHHH
Q 043385 160 ---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNCGA--SHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~~v--~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|+||||||.... +++..+++|+.++.++++++...-. ++||++||..++. +...|+.+|
T Consensus 124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 203 (294)
T 3r3s_A 124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATK 203 (294)
T ss_dssp HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHH
Confidence 579999999996431 2345789999999999999876543 4999999998874 346799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.| ..|+++++|+||.|+++.
T Consensus 204 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 236 (294)
T 3r3s_A 204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence 9999999988875 469999999999999875
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.2e-22 Score=181.67 Aligned_cols=166 Identities=18% Similarity=0.185 Sum_probs=130.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
+++||||||+|+||++++++|+++|++|++++|++++..... +.+.. ..++.++.+|++|+++++++++.+. +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA---SEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLG 78 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999999999999875432111 11111 2368899999999999998887431 4
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcC-CCEEEEEccccccC---CChhHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCG-ASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~-v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
++|+||||||.... +++..+++|+.++.++++++ ++.+ .++||++||...+. +...|+.+|.+
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 158 (256)
T 1geg_A 79 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFA 158 (256)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHH
Confidence 69999999996432 23347889999977766654 4445 67999999987763 34689999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.++.+ ..|+++++|+||++.+++.
T Consensus 159 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 190 (256)
T 1geg_A 159 VRGLTQTAARDLAPLGITVNGYCPGIVKTPMW 190 (256)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH
T ss_pred HHHHHHHHHHHHHHcCeEEEEEEECCCccchh
Confidence 99999988765 4699999999999998753
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=178.19 Aligned_cols=158 Identities=18% Similarity=0.251 Sum_probs=127.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
+|+|+||||+|+||++++++|+++|++|++++|++++. .+.+ ++.++.+|++| +++.++++.+. ++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~------~~~~----~~~~~~~D~~~-~~~~~~~~~~~~~~g~ 70 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA------AQSL----GAVPLPTDLEK-DDPKGLVKRALEALGG 70 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH------HHHH----TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------HHhh----CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999987541 1111 37889999999 77777665331 46
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC-----CChhHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK-----PLLEFQRAKLK 223 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~-----~~~~y~~sK~~ 223 (405)
+|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||..++. +...|+.+|.+
T Consensus 71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a 150 (239)
T 2ekp_A 71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTA 150 (239)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHH
Confidence 9999999996432 23457789999987777765 456778999999998763 34689999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.++.+ ..|+++++|+||++.+++.
T Consensus 151 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 182 (239)
T 2ekp_A 151 LLGLTRALAKEWARLGIRVNLLCPGYVETEFT 182 (239)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEeCCccCchh
Confidence 99999988775 4699999999999999864
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.6e-22 Score=180.82 Aligned_cols=167 Identities=15% Similarity=0.120 Sum_probs=129.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL--- 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~--- 158 (405)
+++++||||||+|+||++++++|+++|++|++++|++++..... ..+.. ..++.++.+|++|+++++++++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVA---QEAQSLGGQCVPVVCDSSQESEVRSLFEQVDRE 79 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH---HHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHHHHcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999865432111 11111 236788999999999998888764
Q ss_pred -CCCccEEEEccc--cc------C--------CCCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC--CCh
Q 043385 159 -GTSIDVVVSCLA--SR------S--------GGVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK--PLL 215 (405)
Q Consensus 159 -~~~~d~Vv~~a~--~~------~--------~~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~--~~~ 215 (405)
.+++|+|||||| .. . ..+...+++|+.++.++.+ .+++.+.++||++||...+. +..
T Consensus 80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 159 (260)
T 2qq5_A 80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNV 159 (260)
T ss_dssp HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCSSH
T ss_pred cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCCCC
Confidence 367899999994 21 1 1123467788888765554 44566778999999998764 457
Q ss_pred hHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 216 EFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.|+.+|...+.+.+.++.+ ..|+++++|+||++..++
T Consensus 160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 8999999999999988765 569999999999998875
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=180.16 Aligned_cols=164 Identities=16% Similarity=0.207 Sum_probs=133.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc-CCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL-QGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++|+|+||||+|+||++++++|+++|++|++++|++++.. +..... .++.++.+|++|+++++++++.+.
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLA------EAVAALEAEAIAVVADVSDPKAVEAVFAEALE 76 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHHTCCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHHhcCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999875432 111111 368889999999999998887642
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEccccccCC---ChhHHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQKP---LLEFQRAKLK 223 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~~~---~~~y~~sK~~ 223 (405)
+++|+||||||.... +++..+++|+.++.++++++...- .++||++||..++ + ...|+.+|..
T Consensus 77 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a 155 (263)
T 2a4k_A 77 EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLG 155 (263)
T ss_dssp HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSH
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHH
Confidence 568999999997532 124477899999999999886642 4699999999988 4 3579999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|+++++|+||.+.++.
T Consensus 156 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 186 (263)
T 2a4k_A 156 VVGLARTLALELARKGVRVNVLLPGLIQTPM 186 (263)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred HHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence 99999888765 569999999999999875
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=5e-22 Score=184.71 Aligned_cols=169 Identities=13% Similarity=0.123 Sum_probs=134.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..+++++||||||+|+||++++++|+++|++|++++|+.++..... ..+. ...++.++.+|++|+++++++++.+.
T Consensus 4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (280)
T 3tox_A 4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELT---DEIAGGGGEAAALAGDVGDEALHEALVELAV 80 (280)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH---HHHTTTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH---HHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999876542111 1111 12468889999999999998887542
Q ss_pred ---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc----CCChhHH
Q 043385 160 ---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ----KPLLEFQ 218 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~----~~~~~y~ 218 (405)
+++|+||||||.... +++..+++|+.|+.++++++ ++.+.++||++||..++ .+...|+
T Consensus 81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~ 160 (280)
T 3tox_A 81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYA 160 (280)
T ss_dssp HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHH
Confidence 469999999996521 23457899999988877765 44566799999998776 2457899
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 161 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 196 (280)
T 3tox_A 161 ASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPA 196 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTT
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCch
Confidence 9999999999998875 579999999999999875
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=177.98 Aligned_cols=165 Identities=15% Similarity=0.159 Sum_probs=129.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
..++++||||||+|+||++++++|+++|++|++++|+.++.... .+.+ ..++.++.+|++|.+++.++++.+ ++
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~D~~~~~~~~~~~~~~-~~ 84 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSL---GNAL--KDNYTIEVCNLANKEECSNLISKT-SN 84 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH--CSSEEEEECCTTSHHHHHHHHHTC-SC
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---HHHh--ccCccEEEcCCCCHHHHHHHHHhc-CC
Confidence 46789999999999999999999999999999999987543210 0111 147889999999999999999853 46
Q ss_pred ccEEEEcccccC---------CCCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHHHHH
Q 043385 162 IDVVVSCLASRS---------GGVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKLKFE 225 (405)
Q Consensus 162 ~d~Vv~~a~~~~---------~~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E 225 (405)
+|+||||||... .++...+++|+.++.++++++ ++.+.++||++||..++. +...|+.+|.+.+
T Consensus 85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 164 (249)
T 3f9i_A 85 LDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLI 164 (249)
T ss_dssp CSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHH
Confidence 999999999643 244568899999988877765 445667999999998873 4578999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.++.+ ..|+++++++||.+.++.
T Consensus 165 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 193 (249)
T 3f9i_A 165 GMTKSLSYEVATRGITVNAVAPGFIKSDM 193 (249)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBC---
T ss_pred HHHHHHHHHHHHcCcEEEEEecCccccCc
Confidence 999988775 468999999999999875
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-22 Score=185.94 Aligned_cols=171 Identities=18% Similarity=0.180 Sum_probs=136.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF---NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.+++++||||||+|+||++++++|+++|+ +|++++|+.++.......+.......++.++.+|++|+++++++++.+
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 35679999999999999999999999987 999999987654322111111111246788999999999999999875
Q ss_pred C---CCccEEEEcccccC-C---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHH
Q 043385 159 G---TSIDVVVSCLASRS-G---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQ 218 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~-~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~ 218 (405)
. +++|+||||||... . +++..+++|+.|+.++++++ ++.+.++||++||..++. +...|+
T Consensus 110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~ 189 (287)
T 3rku_A 110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYC 189 (287)
T ss_dssp CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHH
T ss_pred HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHH
Confidence 3 57999999999643 1 23457899999988888776 556778999999998874 457899
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|.+.+.+.+.++.| ..|+++++|+||.|..+.
T Consensus 190 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 225 (287)
T 3rku_A 190 ASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF 225 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence 9999999999998876 579999999999998875
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=178.75 Aligned_cols=162 Identities=15% Similarity=0.168 Sum_probs=128.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~~ 162 (405)
|+|+||||+|+||++++++|+++|++|++++|++++.... .+.+ ..++.++.+|++|+++++++++.+. +++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQEL---KDEL--GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH--CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHHh--cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5799999999999999999999999999999986543210 0111 1368899999999999999998653 479
Q ss_pred cEEEEcccccC--C--------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHHHHH
Q 043385 163 DVVVSCLASRS--G--------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKLKFE 225 (405)
Q Consensus 163 d~Vv~~a~~~~--~--------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E 225 (405)
|+||||||... . ++...+++|+.|+.++++++. +.+.++||++||..++. +...|+.+|...+
T Consensus 76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 155 (248)
T 3asu_A 76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVR 155 (248)
T ss_dssp CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHH
Confidence 99999999642 1 234478899999877777654 55678999999998874 3568999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcc-cCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFF-KSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~-g~~ 252 (405)
.+.+.++.+ ..|+++++|+||.+. .++
T Consensus 156 ~~~~~la~e~~~~gi~v~~v~PG~v~gT~~ 185 (248)
T 3asu_A 156 QFSLNLRTDLHGTAVRVTDIEPGLVGGTEF 185 (248)
T ss_dssp HHHHHHHHHTTTSCCEEEEEEECSBCC---
T ss_pred HHHHHHHHHhhhcCcEEEEEeccccccCcc
Confidence 999988875 469999999999999 454
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=181.94 Aligned_cols=169 Identities=14% Similarity=0.133 Sum_probs=135.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|++++.......+. ....++.++.+|++|.+++.++++.+.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRII--ASGGTAQELAGDLSEAGAGTDLIERAEAI 107 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHH--HTTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH--hcCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999998876532211111 123478999999999998888776432
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccCC---ChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQKP---LLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~~ 223 (405)
+++|+||||||.... +++..+++|+.|+.++++++ ++.+.++||++||...+.+ ...|+.+|.+
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa 187 (275)
T 4imr_A 108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAA 187 (275)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHH
Confidence 469999999996432 23447889999988887776 4556789999999988743 4569999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 188 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 218 (275)
T 4imr_A 188 QHNLIQSQARDFAGDNVLLNTLAPGLVDTDR 218 (275)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred HHHHHHHHHHHhcccCcEEEEEEeccccCcc
Confidence 99999988875 469999999999999875
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-21 Score=175.75 Aligned_cols=161 Identities=15% Similarity=0.087 Sum_probs=130.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
+|+||||||+++||+++++.|+++|++|++++|+++... +......++..+++|++|+++++++++.+. ++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~------~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~ 75 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSA------DFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 489999999999999999999999999999999875432 223334678899999999999988887653 68
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccCC---ChhHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQKP---LLEFQRAKLKFE 225 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~~~E 225 (405)
+|++|||||.... +|+..+++|+.++..+.+++ ++.+ ++||++||.....+ ...|+.+|..+.
T Consensus 76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~ 154 (247)
T 3ged_A 76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIV 154 (247)
T ss_dssp CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHH
Confidence 9999999996532 34567899999976655544 4444 79999999988743 467999999999
Q ss_pred HHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.++.| ..+++++.|.||++-.+.
T Consensus 155 ~ltk~lA~ela~~IrVN~I~PG~i~t~~ 182 (247)
T 3ged_A 155 ALTHALAMSLGPDVLVNCIAPGWINVTE 182 (247)
T ss_dssp HHHHHHHHHHTTTSEEEEEEECSBCCCC
T ss_pred HHHHHHHHHHCCCCEEEEEecCcCCCCC
Confidence 999998886 458999999999986553
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=181.47 Aligned_cols=166 Identities=15% Similarity=0.089 Sum_probs=132.8
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++++||||||+ |+||++++++|+++|++|++++|+.+ .. ...+.+. ...++.++.+|++|+++++++++.+.
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~---~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LE---KRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLE 94 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GH---HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HH---HHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 667899999999 99999999999999999999999863 11 1112221 12357889999999999998887542
Q ss_pred ---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhcC---CCEEEEEccccccC---CChhH
Q 043385 160 ---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNCG---ASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~~---v~~~V~~Ss~~~~~---~~~~y 217 (405)
+++|+||||||.... ++...+++|+.|+.++++++...- -++||++||..++. +...|
T Consensus 95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 174 (285)
T 2p91_A 95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVM 174 (285)
T ss_dssp HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHH
T ss_pred HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHH
Confidence 469999999996531 123477899999999999987653 36999999988763 34679
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+.+.++.+ ..|+++++|+||.++++.
T Consensus 175 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (285)
T 2p91_A 175 GIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLA 211 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSC
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCch
Confidence 99999999999988765 469999999999999975
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=5.4e-22 Score=185.01 Aligned_cols=168 Identities=15% Similarity=0.141 Sum_probs=130.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL-- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-- 158 (405)
.+++++|+||||+|+||++++++|+++|++|++++|++++.... .+.+.. ..++.++.+|++|+++++++++.+
T Consensus 41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSV---VDEIKSFGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHH---HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH---HHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999998876543211 111211 246889999999999999888653
Q ss_pred -CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 159 -GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 159 -~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
.+++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||..++ .+...|+.+|
T Consensus 118 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK 197 (285)
T 2c07_A 118 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSK 197 (285)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHH
Confidence 2469999999997532 23347789999966666655 45677899999998765 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.|.+.+.++.+ ..|+++++++||.+.++.
T Consensus 198 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 230 (285)
T 2c07_A 198 AGVIGFTKSLAKELASRNITVNAIAPGFISSDM 230 (285)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCc
Confidence 9999999888764 469999999999999875
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=182.38 Aligned_cols=169 Identities=18% Similarity=0.154 Sum_probs=134.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++... ...+.+.. ..++.++.+|++|.+++.++++.+.
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAE--EVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK 103 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHH--HHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 4677899999999999999999999999999999998643110 00011111 2368899999999999988876532
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC----CChhHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK----PLLEFQRAKL 222 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~----~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.++.++++++... +.++||++||...+. +...|+.+|.
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~ 183 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKG 183 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHH
Confidence 469999999997532 23447899999999999998775 567999999988763 2578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|+++++|+||.+.++.
T Consensus 184 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 215 (283)
T 1g0o_A 184 AIETFARCMAIDMADKKITVNVVAPGGIKTDM 215 (283)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCcccchh
Confidence 999999988765 469999999999999875
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=181.77 Aligned_cols=172 Identities=15% Similarity=0.110 Sum_probs=133.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC-----CCchh----Hhh-hccCCcEEEEcCCCCHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG-----RNDKE----ETL-NQLQGASVCFSDVTNLESL 151 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-----~~~~~----~~~-~~~~~v~~~~~Dl~d~~~l 151 (405)
.+++++||||||+|+||++++++|+++|++|++++|+...... ..... ..+ ....++.++.+|++|++++
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 4678999999999999999999999999999999997431110 00000 111 1124789999999999999
Q ss_pred HHHHHhhC---CCccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccCC-----
Q 043385 152 EKSLENLG---TSIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQKP----- 213 (405)
Q Consensus 152 ~~~~~~~~---~~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~~----- 213 (405)
+++++.+. +++|+||||||.... ++...+++|+.++.++++++. +.+ .++||++||...+.+
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 169 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSAD 169 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSS
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCC
Confidence 98887542 469999999997542 344578999999888888753 333 569999999987643
Q ss_pred --ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 214 --LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 214 --~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
...|+.+|.+.+.+.+.++.+ ..|+++++|+||.|.++..
T Consensus 170 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 213 (278)
T 3sx2_A 170 PGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI 213 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccc
Confidence 246999999999999988875 5689999999999999863
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.5e-22 Score=180.48 Aligned_cols=168 Identities=15% Similarity=0.153 Sum_probs=131.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH-HHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL-ESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~~~~~~- 159 (405)
+++++|+||||+|+||++++++|+++|++ |++++|+.... ....+.......++.++.+|++|+ ++++++++.+.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~--~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT--ALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH--HHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHH--HHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence 56789999999999999999999999996 99999986421 001111111123678899999998 88888776432
Q ss_pred --CCccEEEEcccccC-CCCcchhHhHHHHHHHHHHHHHhc----C---CCEEEEEccccccC---CChhHHHHHHHHHH
Q 043385 160 --TSIDVVVSCLASRS-GGVKDSWKIDYEANRNSLVAGRNC----G---ASHFVLLSAICVQK---PLLEFQRAKLKFEA 226 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~-~~~~~~~~~n~~g~~~ll~aa~~~----~---v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~ 226 (405)
+++|+||||||... .+++..+++|+.++.++++++... + .++||++||..++. +...|+.+|.+.|.
T Consensus 81 ~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 160 (254)
T 1sby_A 81 QLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVS 160 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHH
T ss_pred hcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHH
Confidence 46999999999753 456678999999999988887532 2 36899999998874 34689999999999
Q ss_pred HHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 227 EMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 227 ~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.++.+ ..|+++++++||.+.++.
T Consensus 161 ~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 188 (254)
T 1sby_A 161 FTNSLAKLAPITGVTAYSINPGITRTPL 188 (254)
T ss_dssp HHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred HHHHHHHHhccCCeEEEEEecCCccCcc
Confidence 99988764 368999999999999874
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.2e-22 Score=182.74 Aligned_cols=171 Identities=13% Similarity=0.124 Sum_probs=135.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
..+++++||||||+|+||++++++|+++|++|++++|+.++.......+... ...++.++.+|++|+++++++++.+.
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ-FGTDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-HCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999876543211111110 13478999999999999988887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccC---CChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... .++..+++|+.++.++++++. +.+ -++||++||...+. +...|+.+
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 174 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTS 174 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHH
Confidence 469999999997542 234477899999888777654 333 46999999998874 35689999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.+.+.+.++.+ ..|+++++|+||++..+.
T Consensus 175 K~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 208 (266)
T 4egf_A 175 KAGLVMATKVLARELGPHGIRANSVCPTVVLTEM 208 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHH
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCch
Confidence 99999999988875 469999999999999875
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=178.65 Aligned_cols=167 Identities=12% Similarity=0.151 Sum_probs=132.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC---CeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHh
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRG---FNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
.+++++||||||+|+||++++++|+++| ++|++++|+.++... ...+ ....++.++.+|++|.++++++++.
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~----~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 93 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE----LEDLAKNHSNIHILEIDLRNFDAYDKLVAD 93 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH----HHHHHHHCTTEEEEECCTTCGGGHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH----HHHhhccCCceEEEEecCCChHHHHHHHHH
Confidence 4677899999999999999999999999 999999998775421 1111 1134789999999999999888874
Q ss_pred hC---C--CccEEEEcccccC-C---------CCcchhHhHHHHHHHHHHHHHhc----------C-----CCEEEEEcc
Q 043385 158 LG---T--SIDVVVSCLASRS-G---------GVKDSWKIDYEANRNSLVAGRNC----------G-----ASHFVLLSA 207 (405)
Q Consensus 158 ~~---~--~~d~Vv~~a~~~~-~---------~~~~~~~~n~~g~~~ll~aa~~~----------~-----v~~~V~~Ss 207 (405)
+. + ++|+||||||... . .+...+++|+.++.++++++... + .++||++||
T Consensus 94 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS 173 (267)
T 1sny_A 94 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS 173 (267)
T ss_dssp HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred HHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEec
Confidence 32 2 4999999999754 1 22346789999999888877543 2 479999999
Q ss_pred ccccC------CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 208 ICVQK------PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 208 ~~~~~------~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..++. +...|+.+|.+.|.+++.++.+ ..++++++||||++..+.
T Consensus 174 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 226 (267)
T 1sny_A 174 ILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 226 (267)
T ss_dssp GGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred ccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCC
Confidence 88763 4578999999999999988764 469999999999998765
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-21 Score=178.59 Aligned_cols=168 Identities=15% Similarity=0.151 Sum_probs=133.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchh----Hhhh-ccCCcEEEEcCCCCHHHHHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKE----ETLN-QLQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~----~~~~-~~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
++++++||||||+|+||++++++|+++|++|++++|+.++.......+ ..+. ...++.++.+|++|+++++++++
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 85 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA 85 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 467899999999999999999999999999999999987654322111 1111 12468899999999999998887
Q ss_pred hhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc----CCCEEEEEccccccCC----Chh
Q 043385 157 NLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC----GASHFVLLSAICVQKP----LLE 216 (405)
Q Consensus 157 ~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~----~v~~~V~~Ss~~~~~~----~~~ 216 (405)
.+. +++|+||||||.... .++..+++|+.++.++++++... +.++||++||...+.+ ...
T Consensus 86 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~ 165 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTP 165 (285)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCch
Confidence 542 479999999997532 23346789999999999887543 5679999999887643 478
Q ss_pred HHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcc
Q 043385 217 FQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFF 249 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~ 249 (405)
|+.+|++.+.+.+.++.+ ..|+++++|+||++.
T Consensus 166 Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v 200 (285)
T 3sc4_A 166 YMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTV 200 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCB
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcc
Confidence 999999999999998875 578999999999543
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.87 E-value=5e-21 Score=177.41 Aligned_cols=168 Identities=13% Similarity=0.115 Sum_probs=132.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHh----hh-ccCCcEEEEcCCCCHHHHHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEET----LN-QLQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~----~~-~~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
++++|+||||||+|+||++++++|+++|++|++++|+.++........+. +. ...++.++.+|++|+++++++++
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 46789999999999999999999999999999999998765433222211 11 12468899999999999988887
Q ss_pred hhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccCC-----Ch
Q 043385 157 NLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQKP-----LL 215 (405)
Q Consensus 157 ~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~~-----~~ 215 (405)
.+. +++|+||||||.... +++..+++|+.++.++++++ ++.+.++||++||...+.+ ..
T Consensus 83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~ 162 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHT 162 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCH
T ss_pred HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCc
Confidence 542 579999999997532 23447789999988877765 4456679999999988754 46
Q ss_pred hHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcc
Q 043385 216 EFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFF 249 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~ 249 (405)
.|+.+|.+.+.+.+.++.+ ..|+++++|+||.+.
T Consensus 163 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v 198 (274)
T 3e03_A 163 GYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVI 198 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCB
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCccc
Confidence 7999999999999988875 568999999999543
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=181.45 Aligned_cols=173 Identities=14% Similarity=0.221 Sum_probs=133.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcC----------CCCchhHhhh-ccCCcEEEEcCCCCHH
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIR----------GRNDKEETLN-QLQGASVCFSDVTNLE 149 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~----------~~~~~~~~~~-~~~~v~~~~~Dl~d~~ 149 (405)
..+++++||||||+|+||++++++|+++|++|++++|+..... ........+. ...++.++.+|++|++
T Consensus 7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD 86 (277)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 3567899999999999999999999999999999998532110 0000011111 1247889999999999
Q ss_pred HHHHHHHhhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcC-CCEEEEEccccccC
Q 043385 150 SLEKSLENLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCG-ASHFVLLSAICVQK 212 (405)
Q Consensus 150 ~l~~~~~~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~-v~~~V~~Ss~~~~~ 212 (405)
+++++++.+. +++|+||||||.... +++..+++|+.++.++++++ ++.+ -++||++||...+.
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 166 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK 166 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence 9998887542 579999999997542 23447899999988877764 4444 46999999998874
Q ss_pred ---CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 213 ---PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 213 ---~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
....|+.+|.+.+.+.+.++.+ ..|+++++|+||.+..+..
T Consensus 167 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 212 (277)
T 3tsc_A 167 MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMG 212 (277)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGG
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcc
Confidence 3568999999999999988876 5689999999999999864
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=180.67 Aligned_cols=167 Identities=19% Similarity=0.160 Sum_probs=132.7
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 82 NPKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 82 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.+++|+||||||+ |+||++++++|+++|++|++++|+++ .. ...+.+. ...++.++.+|++|+++++++++.+
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~---~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LR---PEAEKLAEALGGALLFRADVTQDEELDALFAGV 80 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GH---HHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HH---HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHH
Confidence 3567899999999 99999999999999999999999863 11 1111221 1235789999999999998888753
Q ss_pred C---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEccccccC---CChhH
Q 043385 159 G---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~~---~~~~y 217 (405)
. +++|+||||||.... +++..+++|+.++.++++++...- -++||++||..++. +...|
T Consensus 81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 160 (261)
T 2wyu_A 81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVM 160 (261)
T ss_dssp HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHH
Confidence 2 469999999996431 233478899999999999987651 25999999988764 35679
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+.+.++.+ ..|+++++|+||+++++.
T Consensus 161 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 197 (261)
T 2wyu_A 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence 99999999999988765 469999999999999975
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=180.30 Aligned_cols=171 Identities=16% Similarity=0.130 Sum_probs=133.8
Q ss_pred CCCCCCeEEEEcCCC-hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTG-YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG-~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..+++++||||||+| +||++++++|+++|++|++++|+.++.......+... ...++.++.+|++|+++++++++.+.
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL-GLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-CSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-CCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 346789999999997 7999999999999999999999876543111111111 12478999999999999998887642
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc-----CCCEEEEEccccccC---CChhHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC-----GASHFVLLSAICVQK---PLLEFQR 219 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~-----~v~~~V~~Ss~~~~~---~~~~y~~ 219 (405)
+++|+||||||.... +++..+++|+.++.++++++... +.++||++||...+. +...|+.
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~ 176 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAA 176 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHH
Confidence 468999999997532 23447889999988888876543 456899999988764 4578999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 177 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (266)
T 3o38_A 177 AKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF 211 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchh
Confidence 999999999988775 479999999999999875
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.87 E-value=4.5e-22 Score=181.03 Aligned_cols=165 Identities=16% Similarity=0.129 Sum_probs=129.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhh---C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAI-AREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENL---G 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~---~ 159 (405)
+|+||||||+|+||++++++|+++|++|+++ +|++++..... +.+. ...++.++.+|++|+++++++++.+ .
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS---KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW 77 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH---HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999985 67654332111 1111 1236788999999999999888753 1
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEcccccc---CCChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQ---KPLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~---~~~~~y~~sK~~ 223 (405)
+++|+||||||.... ++...+++|+.++.++++++.. .+.++||++||...+ .+...|+.+|..
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 157 (244)
T 1edo_A 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAG 157 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHH
Confidence 469999999997542 2334778999998888877654 467899999998664 346789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|++++++|||+++++.
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (244)
T 1edo_A 158 VIGFSKTAAREGASRNINVNVVCPGFIASDM 188 (244)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred HHHHHHHHHHHhhhcCCEEEEEeeCccccch
Confidence 99999888765 469999999999999875
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=184.33 Aligned_cols=171 Identities=16% Similarity=0.111 Sum_probs=133.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh---hccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL---NQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~---~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.+++++|+||||+|+||++++++|+++|++|++++|+.++.......+... ....++.++.+|++|++++.++++.+
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 466789999999999999999999999999999999865432111111000 01247899999999999999888754
Q ss_pred C---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEcccccc--CCChhHHHH
Q 043385 159 G---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQ--KPLLEFQRA 220 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~--~~~~~y~~s 220 (405)
. +++|+||||||.... ++...+++|+.++.++++++.. .+.++||++||...+ .....|+.+
T Consensus 95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~Y~~s 174 (303)
T 1yxm_A 95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAA 174 (303)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCCCcchhhHHH
Confidence 2 469999999995431 2234688999999999998754 235789999998832 235689999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|...+.+.+.++.+ ..|+++++||||+++++.
T Consensus 175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 175 RAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 208 (303)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence 99999999988774 359999999999999984
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=179.78 Aligned_cols=166 Identities=19% Similarity=0.183 Sum_probs=132.3
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++++||||||+ |+||++++++|+++|++|++++|++ +.. ...+.+ ....+..++.+|++|+++++++++.+.
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~---~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLK---GRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG 82 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTH---HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHH---HHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHH
Confidence 567899999999 9999999999999999999999986 221 111112 112345789999999999998887542
Q ss_pred ---CCccEEEEcccccCC--------------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEccccccC---CChhH
Q 043385 160 ---TSIDVVVSCLASRSG--------------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~--------------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~~---~~~~y 217 (405)
+++|+||||||.... ++...+++|+.++.++++++...- -++||++||...+. +...|
T Consensus 83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 162 (265)
T 1qsg_A 83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVM 162 (265)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHH
T ss_pred HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHH
Confidence 469999999996531 123477899999999999987652 25999999988764 34679
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+.+.++.+ ..|+++++|+||+++++.
T Consensus 163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (265)
T 1qsg_A 163 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 199 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccch
Confidence 99999999999988775 469999999999999985
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-22 Score=179.78 Aligned_cols=170 Identities=14% Similarity=0.117 Sum_probs=136.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|+++||||+++||+++++.|+++|++|++.+|++++.....+.+. ....++..+.+|++|+++++++++.+.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~--~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLT--RKGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHH--HTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--hcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999998765432222111 122468889999999999998887763
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHh-cCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRN-CGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~-~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|++|||||.... +|+..+++|+.|+..+.++ +.+ .+-++||++||..... ....|+.+|
T Consensus 84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asK 163 (255)
T 4g81_D 84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAK 163 (255)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHH
Confidence 789999999997542 3455789999996665554 443 3457999999998874 346799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
..+..+.+.++.| .+||+++.|.||.|..+..
T Consensus 164 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~ 197 (255)
T 4g81_D 164 GGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMN 197 (255)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchh
Confidence 9999999998876 6899999999999988753
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.5e-22 Score=181.46 Aligned_cols=153 Identities=15% Similarity=0.174 Sum_probs=123.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+||||||+|+||++++++|+++|++|++++|++++.. . . +.+|++|+++++++++.+.+++|+|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~----~-~~~Dl~~~~~v~~~~~~~~~~id~l 66 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----------A----D-LSTAEGRKQAIADVLAKCSKGMDGL 66 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----------C----C-TTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc----------c----c-cccCCCCHHHHHHHHHHhCCCCCEE
Confidence 68999999999999999999999999999999876532 0 1 5689999999999987632468999
Q ss_pred EEcccccC--CCCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc----------------------------
Q 043385 166 VSCLASRS--GGVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---------------------------- 211 (405)
Q Consensus 166 v~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---------------------------- 211 (405)
|||||... ..++..+++|+.++.++++++. +.+.++||++||..++
T Consensus 67 v~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (257)
T 1fjh_A 67 VLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHA 146 (257)
T ss_dssp EECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTC
T ss_pred EECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcc
Confidence 99999754 3467789999999888888764 5567899999999887
Q ss_pred CC---ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 212 KP---LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 212 ~~---~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+ ...|+.+|.+.+.+++.++.+ ..|+++++|+||.+.++..
T Consensus 147 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 193 (257)
T 1fjh_A 147 GEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL 193 (257)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccc
Confidence 32 357999999999999988765 4799999999999998763
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-21 Score=179.05 Aligned_cols=166 Identities=14% Similarity=0.103 Sum_probs=132.9
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++++||||||+ |+||++++++|+++|++|++++|+.+ .. ...+.+. ...++.++.+|++|+++++++++.+.
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~---~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 79 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LE---KRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVK 79 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-TH---HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HH---HHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHH
Confidence 567899999999 99999999999999999999999874 21 1111221 12357899999999999998887542
Q ss_pred ---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEccccccC---CChhHH
Q 043385 160 ---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQK---PLLEFQ 218 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~~---~~~~y~ 218 (405)
+++|+||||||.... +++..+++|+.++.++++++...- -++||++||...+. +...|+
T Consensus 80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 159 (275)
T 2pd4_A 80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMG 159 (275)
T ss_dssp HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHH
T ss_pred HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhH
Confidence 469999999996531 123477899999999999987651 25999999987763 456799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|.+.+.+.+.++.+ ..|+++++|+||.+.++.
T Consensus 160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 195 (275)
T 2pd4_A 160 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 195 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccch
Confidence 9999999999988775 469999999999999875
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.9e-21 Score=174.42 Aligned_cols=168 Identities=14% Similarity=0.051 Sum_probs=134.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.++++|++|||||+++||+++++.|+++|++|++++|+.+.... .........++..+.+|++|+++++++++.+.
T Consensus 3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~ 79 (258)
T 4gkb_A 3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF---LDALAQRQPRATYLPVELQDDAQCRDAVAQTIA 79 (258)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH---HHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH---HHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999998765321 11112223578999999999999988877653
Q ss_pred --CCccEEEEcccccCC--------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|++|||||.... +|...+++|+.++..+.++ +++.+ ++||++||.... .....|+.+|.
T Consensus 80 ~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKa 158 (258)
T 4gkb_A 80 TFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKG 158 (258)
T ss_dssp HHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSCHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCchHHHHHHH
Confidence 789999999997532 2445778999986665554 44444 799999999876 34578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+++.+.+.++.| .+||+++.|.||.+..|.
T Consensus 159 av~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 190 (258)
T 4gkb_A 159 AQLALTREWAVALREHGVRVNAVIPAEVMTPL 190 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCSC
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCCCCChh
Confidence 999999998876 689999999999998765
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=180.29 Aligned_cols=166 Identities=11% Similarity=0.088 Sum_probs=128.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++.... ...+ ..++.++.+|++|+++++++++.+.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQET---AAEI--GDDALCVPTDVTDPDSVRALFTATVEK 99 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH--TSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHh--CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999987643211 1111 1478999999999999998887542
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcC--CCEEEEEccccccC---CChhHHH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCG--ASHFVLLSAICVQK---PLLEFQR 219 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~--v~~~V~~Ss~~~~~---~~~~y~~ 219 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+ -++||++||..++. +...|+.
T Consensus 100 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a 179 (272)
T 4dyv_A 100 FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTA 179 (272)
T ss_dssp HSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHH
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHH
Confidence 469999999997432 22457889999976666654 4443 46999999998874 4578999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 214 (272)
T 4dyv_A 180 TKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPM 214 (272)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---
T ss_pred HHHHHHHHHHHHHHHhCccCEEEEEEEECcccChh
Confidence 999999999988875 569999999999998875
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=178.63 Aligned_cols=172 Identities=15% Similarity=0.067 Sum_probs=135.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 80 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
+..++++++|||||+|+||++++++|+++|++|++++++..... ....+.+. ...++.++.+|++|+++++++++.+
T Consensus 13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDA--EKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH--HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH--HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 34577899999999999999999999999999999887643211 00011111 1247889999999999999888754
Q ss_pred C---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcCC--CEEEEEccccc-c---CCChhHHHH
Q 043385 159 G---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCGA--SHFVLLSAICV-Q---KPLLEFQRA 220 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~v--~~~V~~Ss~~~-~---~~~~~y~~s 220 (405)
. +++|+||||||.... +++..+++|+.++.++++++...-. ++||++||... . .+...|+.+
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as 170 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGS 170 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHH
Confidence 2 579999999997532 2345789999999999998876533 49999999873 2 356789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+.+.+.+.++.+ ..|+++++|+||.+..+..
T Consensus 171 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 205 (270)
T 3is3_A 171 KGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMF 205 (270)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhh
Confidence 99999999988875 4699999999999998863
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-22 Score=183.07 Aligned_cols=167 Identities=16% Similarity=0.116 Sum_probs=132.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVS-RGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++||||||+|+||++++++|++ +|++|++++|+.++..... +.+.. ..++.++.+|++|.++++++++.+.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAV---QQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHH---HHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHH---HHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 568999999999999999999999 9999999999865432111 11111 2468899999999999998887431
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEccccccC---------------
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQK--------------- 212 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~~--------------- 212 (405)
+++|+||||||.... ++...+++|+.++.++++++.... .++||++||..++.
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~ 159 (276)
T 1wma_A 80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRS 159 (276)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccc
Confidence 359999999996532 123468899999999999998753 24999999976641
Q ss_pred -----------------------------CChhHHHHHHHHHHHHHHHhhh--c----CCceEEEEecCCcccCch
Q 043385 213 -----------------------------PLLEFQRAKLKFEAEMMKVAEE--D----SGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 213 -----------------------------~~~~y~~sK~~~E~~~~~~~~~--~----~gi~~~ilRp~~v~g~~~ 253 (405)
|...|+.+|.+.|.+++.++.+ . .++++++|+||++..+..
T Consensus 160 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~ 235 (276)
T 1wma_A 160 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA 235 (276)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred cccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcC
Confidence 3478999999999999988775 2 599999999999988753
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=181.93 Aligned_cols=173 Identities=16% Similarity=0.166 Sum_probs=135.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCC-----CchhH----hh-hccCCcEEEEcCCCCHHH
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGR-----NDKEE----TL-NQLQGASVCFSDVTNLES 150 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~-----~~~~~----~~-~~~~~v~~~~~Dl~d~~~ 150 (405)
..+++++||||||+|+||++++++|+++|++|++++|+....... .+..+ .. ....++.++.+|++|+++
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA 85 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence 356789999999999999999999999999999999974322110 00001 11 112478899999999999
Q ss_pred HHHHHHhhC---CCccEEEEcccccCC-------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC------
Q 043385 151 LEKSLENLG---TSIDVVVSCLASRSG-------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK------ 212 (405)
Q Consensus 151 l~~~~~~~~---~~~d~Vv~~a~~~~~-------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~------ 212 (405)
++++++.+. +++|+||||||.... ++...+++|+.++.++++++... +.++||++||...+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 165 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP 165 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc
Confidence 988887542 469999999997532 23457899999999999998765 345999999987762
Q ss_pred --------CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 213 --------PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 213 --------~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+...|+.+|...+.+.+.++.+ ..|+++++|+||++..+..
T Consensus 166 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 216 (287)
T 3pxx_A 166 GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDML 216 (287)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTT
T ss_pred cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence 2356999999999999988875 4599999999999999864
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.7e-22 Score=182.00 Aligned_cols=219 Identities=12% Similarity=0.052 Sum_probs=151.9
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..++|+||||||+ |+||++++++|+++|++|++++|+..... ...+......++.++.+|++|+++++++++.+.
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD---RITEFAAEFGSELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH---HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHH---HHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence 4678999999999 99999999999999999999999843221 011111223468899999999999998887642
Q ss_pred ---CCccEEEEcccccCC--------------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEccccccC---CChhH
Q 043385 160 ---TSIDVVVSCLASRSG--------------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~--------------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~~---~~~~y 217 (405)
+++|+||||||.... ++...+++|+.++.++++++...- .++||++||...+. +...|
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 167 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTM 167 (271)
T ss_dssp HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHH
T ss_pred HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccch
Confidence 579999999997531 123467899999999999987642 35899999988874 45789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeee----hhhcc--cc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCA----YCVLS--ED 282 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~----~~~~~--~~ 282 (405)
+.+|++.+.+.+.++.+ ..|+++++|+||.+..+.. .+........++..++...... .++.. ..
T Consensus 168 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~ 247 (271)
T 3ek2_A 168 GLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASG 247 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred hHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCC
Confidence 99999999999988875 5799999999999998652 2223333333322222222211 12222 23
Q ss_pred cccceEeccCCCCCCCHHHHHH
Q 043385 283 KINQILPIGGPGKALTPLEQGE 304 (405)
Q Consensus 283 ~~~~~y~i~~~g~~~t~~ela~ 304 (405)
..|+++++.| |..+++.++++
T Consensus 248 ~tG~~i~vdg-G~~~~~~~~~~ 268 (271)
T 3ek2_A 248 VTAEVMHVDS-GFNAVVGGMAG 268 (271)
T ss_dssp CCSEEEEEST-TGGGBCCCC--
T ss_pred eeeeEEEECC-Ceeeehhhhhh
Confidence 4678899887 46666555543
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-21 Score=178.37 Aligned_cols=168 Identities=19% Similarity=0.177 Sum_probs=133.8
Q ss_pred CCCCCCCeEEEEcCCCh--hHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHH
Q 043385 80 NKNPKDINILVVGSTGY--IGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 80 ~~~~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
+..+++++||||||+|+ ||++++++|+++|++|++++|+... ...+.+ ....++.++.+|++|.++++++++
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 95 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFK-----DRVEKLCAEFNPAAVLPCDVISDQEIKDLFV 95 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCH-----HHHHHHHGGGCCSEEEECCTTCHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHH-----HHHHHHHHhcCCceEEEeecCCHHHHHHHHH
Confidence 34567899999999965 9999999999999999999998711 111222 233568999999999999999887
Q ss_pred hhC---CCccEEEEcccccCC--------------CCcchhHhHHHHHHHHHHHHHhc---CCCEEEEEccccccC---C
Q 043385 157 NLG---TSIDVVVSCLASRSG--------------GVKDSWKIDYEANRNSLVAGRNC---GASHFVLLSAICVQK---P 213 (405)
Q Consensus 157 ~~~---~~~d~Vv~~a~~~~~--------------~~~~~~~~n~~g~~~ll~aa~~~---~v~~~V~~Ss~~~~~---~ 213 (405)
.+. +++|+||||||.... .+...+++|+.++.++++++... +.++||++||..++. +
T Consensus 96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 175 (280)
T 3nrc_A 96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPS 175 (280)
T ss_dssp HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTT
T ss_pred HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCC
Confidence 652 578999999997532 12336789999999988887643 346999999998874 3
Q ss_pred ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 214 LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...|+.+|.+.+.+.+.++.+ ..|+++++++||.+..+.
T Consensus 176 ~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (280)
T 3nrc_A 176 YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLA 216 (280)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSG
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchh
Confidence 468999999999999988775 478999999999999875
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-21 Score=183.90 Aligned_cols=174 Identities=16% Similarity=0.159 Sum_probs=133.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC--C---Cchh----Hhh-hccCCcEEEEcCCCCHH
Q 043385 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG--R---NDKE----ETL-NQLQGASVCFSDVTNLE 149 (405)
Q Consensus 80 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~--~---~~~~----~~~-~~~~~v~~~~~Dl~d~~ 149 (405)
+..+++++||||||+|+||++++++|+++|++|++++|+...... . .... ..+ ....++.++.+|++|++
T Consensus 41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 120 (317)
T 3oec_A 41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA 120 (317)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 345778999999999999999999999999999999986332110 0 0001 111 11247889999999999
Q ss_pred HHHHHHHhhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccccccC
Q 043385 150 SLEKSLENLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAICVQK 212 (405)
Q Consensus 150 ~l~~~~~~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~~~~~ 212 (405)
+++++++.+. +++|+||||||.... ++...+++|+.++.++++++. +.+ -++||++||..++.
T Consensus 121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~ 200 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR 200 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence 9998887542 579999999997532 234577999999888777763 333 46899999998874
Q ss_pred ---CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 213 ---PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 213 ---~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+...|+.+|.+.+.+.+.++.+ ..|+++++|+||+|.++..
T Consensus 201 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 246 (317)
T 3oec_A 201 GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMA 246 (317)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccc
Confidence 3568999999999999998875 4699999999999998753
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=178.88 Aligned_cols=170 Identities=14% Similarity=0.089 Sum_probs=130.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++++..... ......+.. ..++.++.+|++|+++++++++.+.
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGA--ATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHH--HHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH--HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999855443211 001111211 2468899999999999998887542
Q ss_pred --CCccEEEEccccc-CC---------CCcchhHhHHHHHHHHHHHHHhcCC--CEEEEEcccccc----CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASR-SG---------GVKDSWKIDYEANRNSLVAGRNCGA--SHFVLLSAICVQ----KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~-~~---------~~~~~~~~n~~g~~~ll~aa~~~~v--~~~V~~Ss~~~~----~~~~~y~~sK 221 (405)
+++|+||||||.. .. .++..+++|+.++.++++++...-. ++||++||..++ .+...|+.+|
T Consensus 83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 162 (259)
T 3edm_A 83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSK 162 (259)
T ss_dssp HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHH
T ss_pred HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHH
Confidence 4699999999865 21 1245789999999999999876532 489999998765 3456899999
Q ss_pred HHHHHHHHHHhhh-cCCceEEEEecCCcccCch
Q 043385 222 LKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 222 ~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.+.++.+ ...+++++|.||.+..++.
T Consensus 163 aa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~ 195 (259)
T 3edm_A 163 GAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFH 195 (259)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECCBCC---
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEECCCcCccc
Confidence 9999999998876 2349999999999988753
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=6e-21 Score=174.39 Aligned_cols=158 Identities=20% Similarity=0.214 Sum_probs=124.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+++++||||||+|+||++++++|+++|++|++++|+++.. +. ...+.++ +|+ .++++++++.+ .+
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-------~~---~~~~~~~-~D~--~~~~~~~~~~~-~~ 81 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL-------KR---SGHRYVV-CDL--RKDLDLLFEKV-KE 81 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HH---TCSEEEE-CCT--TTCHHHHHHHS-CC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-------Hh---hCCeEEE-eeH--HHHHHHHHHHh-cC
Confidence 46789999999999999999999999999999999986321 11 2356667 999 44566666643 25
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHH----HHHHHHHhcCCCEEEEEccccccC---CChhHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANR----NSLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKFE 225 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~----~ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E 225 (405)
+|+||||||.... .+...+++|+.++. .+++.+++.+.++||++||..++. +...|+.+|.+.+
T Consensus 82 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 161 (249)
T 1o5i_A 82 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALT 161 (249)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHH
Confidence 9999999996432 23346789998855 456666777888999999998874 3568999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.++.+ ..|+++++|+||.++++..
T Consensus 162 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 191 (249)
T 1o5i_A 162 GFLKTLSFEVAPYGITVNCVAPGWTETERV 191 (249)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTH
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCCCccCcc
Confidence 999888765 4799999999999999864
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=9e-22 Score=178.27 Aligned_cols=163 Identities=14% Similarity=0.153 Sum_probs=129.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
++++||||||+|+||++++++|+++|++|++++|+.++.... ...+. .++.++.+|++|+++++++++.+. +
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQ---ELLLG--NAVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHG--GGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHhc--CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999999987654211 11121 258899999999999998887542 5
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccCC---ChhHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQKP---LLEFQRAKLKF 224 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~~---~~~y~~sK~~~ 224 (405)
++|+||||||.... +++..+++|+.|+.++++++. +.+ ++||++||...+.+ ...|+.+|.+.
T Consensus 77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~ 155 (235)
T 3l6e_A 77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGM 155 (235)
T ss_dssp SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHH
Confidence 69999999997432 234578999999887777763 333 39999999887743 46799999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.+ ..|+++++++||.+..++
T Consensus 156 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 185 (235)
T 3l6e_A 156 RGFLESLRAELKDSPLRLVNLYPSGIRSEF 185 (235)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHhhccCCEEEEEeCCCccCcc
Confidence 9999998876 568999999999998765
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=178.67 Aligned_cols=168 Identities=18% Similarity=0.155 Sum_probs=129.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEec-CCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR-EKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r-~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
...+++||||||+|+||++++++|+++|++|+++++ +....... ..... ...++.++.+|++|.++++++++.+.
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKW---LEDQKALGFDFYASEGNVGDWDSTKQAFDKVK 86 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHH---HHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH---HHHHHhcCCeeEEEecCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999884 44332111 11111 12478999999999999998887542
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|+||||||.... ++...+++|+.++.+++++ +++.+.++||++||...+. +...|+.+
T Consensus 87 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 166 (256)
T 3ezl_A 87 AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTA 166 (256)
T ss_dssp HHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHH
Confidence 579999999997542 2334788999996666554 4566778999999998763 45789999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.+.+.+.++.+ ..|+++++++||.+..+.
T Consensus 167 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 200 (256)
T 3ezl_A 167 KAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 200 (256)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcc
Confidence 99999999888875 468999999999998864
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-21 Score=177.98 Aligned_cols=167 Identities=13% Similarity=0.116 Sum_probs=126.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|+.++.... ...+ ...+.++.+|++|.++++++++.+.
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV---AGEI--GDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH--CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHH---HHHh--CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999987654211 0111 2478999999999999988887542
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHH----hcC----CCEEEEEccccccCC---ChhH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGR----NCG----ASHFVLLSAICVQKP---LLEF 217 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~----~~~----v~~~V~~Ss~~~~~~---~~~y 217 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+ ..+||++||...+.+ ...|
T Consensus 81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y 160 (261)
T 3n74_A 81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWY 160 (261)
T ss_dssp HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHH
T ss_pred cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHH
Confidence 469999999997531 123467899999777776653 322 457999999988743 4669
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+|++.+.+.+.++.+ ..++++++++||.+..+..
T Consensus 161 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 198 (261)
T 3n74_A 161 NATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLL 198 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhh
Confidence 99999999999988875 4699999999999998753
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.8e-21 Score=176.66 Aligned_cols=169 Identities=12% Similarity=0.168 Sum_probs=132.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++|+||||||+|+||++++++|+++|++|++++++..... ....+.+. ...++.++.+|++|+++++++++.+.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERA--QAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHH--HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999977653211 00011111 12478899999999999988887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc----CCChhHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ----KPLLEFQRAKL 222 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~----~~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.++.++++++... +.++||++||.... .+...|+.+|.
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKa 185 (271)
T 3v2g_A 106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKA 185 (271)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHH
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHH
Confidence 469999999997532 23457899999999999988764 34699999986553 34578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 186 a~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 217 (271)
T 3v2g_A 186 ALAGLTKGLARDLGPRGITVNIVHPGSTDTDM 217 (271)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSSS
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEecCCCcCCc
Confidence 999999988875 469999999999999875
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=7.5e-21 Score=178.22 Aligned_cols=169 Identities=14% Similarity=0.075 Sum_probs=135.8
Q ss_pred CCCCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 81 KNPKDINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 81 ~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
..+++++||||||+| +||++++++|+++|++|++++|+.+..... .........+.++.+|++|+++++++++.+
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRV---DPLAESLGVKLTVPCDVSDAESVDNMFKVL 102 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH---HHHHHHHTCCEEEECCTTCHHHHHHHHHHH
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHHHHhcCCeEEEEcCCCCHHHHHHHHHHH
Confidence 356789999999997 999999999999999999999986432111 111222346789999999999999988764
Q ss_pred C---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEccccccC---CChhH
Q 043385 159 G---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~~---~~~~y 217 (405)
. +++|+||||||.... ++...+++|+.++.++++++...- .++||++||...+. ....|
T Consensus 103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y 182 (296)
T 3k31_A 103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVM 182 (296)
T ss_dssp HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHH
T ss_pred HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhh
Confidence 2 579999999997531 234578899999999999987643 35999999998874 45789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+.+.++.+ ..|+++++|+||++..+.
T Consensus 183 ~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 219 (296)
T 3k31_A 183 GVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLA 219 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCch
Confidence 99999999999998875 569999999999999875
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.2e-21 Score=180.51 Aligned_cols=170 Identities=10% Similarity=0.079 Sum_probs=128.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||||+|+||++++++|+++|++|++++|++++.......+... ....+.++.+|++|+++++++++.+.
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR-TGNIVRAVVCDVGDPDQVAALFAAVRAE 108 (281)
T ss_dssp ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-HSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999876543211111111 11235889999999999998887642
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcC--CCEEEEEccccccC---CChhHHH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCG--ASHFVLLSAICVQK---PLLEFQR 219 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~--v~~~V~~Ss~~~~~---~~~~y~~ 219 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+ .++||++||...+. +...|+.
T Consensus 109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a 188 (281)
T 4dry_A 109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTA 188 (281)
T ss_dssp HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHH
Confidence 578999999997421 23347889999976666554 4443 46999999998874 4578999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|.+.+.+.+.++.| ..|+++++|+||.+..+.
T Consensus 189 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 223 (281)
T 4dry_A 189 TKHAITGLTKSTALDGRMHDIACGQIDIGNAATDM 223 (281)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC--
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChh
Confidence 999999999988875 579999999999998875
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=175.88 Aligned_cols=157 Identities=13% Similarity=0.145 Sum_probs=128.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC----
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---- 159 (405)
++|+||||||+|+||++++++|+++|++|++++|++++.. ....++.+|++|+++++++++.+.
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 69 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQ 69 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999876532 134677899999999888877431
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... .++..+++|+.++.++++++... ..++||++||..++. +...|+.+|.+
T Consensus 70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 149 (236)
T 1ooe_A 70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAA 149 (236)
T ss_dssp TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHH
Confidence 369999999996431 12346789999999999888763 125999999998874 45689999999
Q ss_pred HHHHHHHHhhh----cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE----DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|+++++|+||++.++.
T Consensus 150 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~ 182 (236)
T 1ooe_A 150 VHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM 182 (236)
T ss_dssp HHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred HHHHHHHHHHHhcccCCCeEEEEEecCcccCcc
Confidence 99999998875 357999999999999875
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-21 Score=172.78 Aligned_cols=148 Identities=16% Similarity=0.148 Sum_probs=124.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.++++++|||||+|+||++++++|+++|++|++++|+.+ +|++|+++++++++.+ ++
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~-g~ 59 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI-GA 59 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH-CS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh-CC
Confidence 456789999999999999999999999999999998742 7999999999998865 56
Q ss_pred ccEEEEcccccC-C---------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEccccccC---CChhHHHHHHHHHH
Q 043385 162 IDVVVSCLASRS-G---------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQK---PLLEFQRAKLKFEA 226 (405)
Q Consensus 162 ~d~Vv~~a~~~~-~---------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~ 226 (405)
+|+||||||... . ++...+++|+.++.++++++...- -++||++||...+. +...|+.+|...+.
T Consensus 60 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~ 139 (223)
T 3uce_A 60 FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEA 139 (223)
T ss_dssp EEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHHH
Confidence 999999999652 1 233467899999999999987652 24899999998874 45789999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCc
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.++.+-..+++++++||.+..+.
T Consensus 140 ~~~~la~e~~~i~vn~v~PG~v~t~~ 165 (223)
T 3uce_A 140 TTKVLAKELAPIRVNAISPGLTKTEA 165 (223)
T ss_dssp HHHHHHHHHTTSEEEEEEECSBCSGG
T ss_pred HHHHHHHhhcCcEEEEEEeCCCcchh
Confidence 99999886333999999999999874
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.4e-21 Score=172.49 Aligned_cols=162 Identities=14% Similarity=0.107 Sum_probs=127.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
||+||||||+|+||++++++|+++|++|++++|++++.. +.... ..++.++.+|++|.++++++++.+....|
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d 74 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLS------TVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPS 74 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHH------HHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCS
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH------HHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCC
Confidence 367999999999999999999999999999999876542 11111 24688999999999999999998544459
Q ss_pred EEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcC---CCEEEEEccccccC---CChhHHHHHHHHHHHH
Q 043385 164 VVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCG---ASHFVLLSAICVQK---PLLEFQRAKLKFEAEM 228 (405)
Q Consensus 164 ~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~---v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~~ 228 (405)
+||||||.... ++...+++|+.++.++++++...- -.+||++||..++. +...|+.+|.+.+.+.
T Consensus 75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~ 154 (230)
T 3guy_A 75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLI 154 (230)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHH
Confidence 99999996532 233477999999998888765431 13999999998874 4578999999999999
Q ss_pred HHHhhh--cCCceEEEEecCCcccCc
Q 043385 229 MKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 229 ~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.++.+ ..|++++.++||.+..++
T Consensus 155 ~~la~e~~~~gi~v~~v~PG~v~t~~ 180 (230)
T 3guy_A 155 ESVRLELKGKPMKIIAVYPGGMATEF 180 (230)
T ss_dssp HHHHHHTTTSSCEEEEEEECCC----
T ss_pred HHHHHHHHhcCeEEEEEECCcccChH
Confidence 998876 468999999999998764
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.9e-21 Score=174.19 Aligned_cols=156 Identities=21% Similarity=0.238 Sum_probs=129.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
.++|+||||||+|+||++++++|+++|++|++++|+.++.. ...+.+|++|.++++++++.+.
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~~~ 85 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINSKS 85 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHHHc
Confidence 45689999999999999999999999999999999986532 2457889999999999888752
Q ss_pred CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEccccccC---CChhHHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
+++|+||||||.... ++...+++|+.++.++++++...- -++||++||..++. +...|+.+|.+.
T Consensus 86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~ 165 (251)
T 3orf_A 86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAAT 165 (251)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHH
Confidence 578999999996421 223477899999999999887642 24899999998874 457899999999
Q ss_pred HHHHHHHhhh----cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE----DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~----~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.+ ..++++++|+||.+..+.
T Consensus 166 ~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~ 197 (251)
T 3orf_A 166 HHIIKDLASENGGLPAGSTSLGILPVTLDTPT 197 (251)
T ss_dssp HHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH
T ss_pred HHHHHHHHHHhcccCCCcEEEEEecCcCcCcc
Confidence 9999999886 479999999999998865
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-21 Score=178.40 Aligned_cols=173 Identities=17% Similarity=0.164 Sum_probs=134.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCC---------Cchh----Hhhh-ccCCcEEEEcCCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGR---------NDKE----ETLN-QLQGASVCFSDVT 146 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~---------~~~~----~~~~-~~~~v~~~~~Dl~ 146 (405)
..+++++||||||+|+||++++++|+++|++|++++|+....... .... +.+. ...++.++.+|++
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 356789999999999999999999999999999999984322100 0011 1111 1246889999999
Q ss_pred CHHHHHHHHHhhC---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHH----hcC-CCEEEEEccc
Q 043385 147 NLESLEKSLENLG---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGR----NCG-ASHFVLLSAI 208 (405)
Q Consensus 147 d~~~l~~~~~~~~---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~----~~~-v~~~V~~Ss~ 208 (405)
|+++++++++.+. +++|+||||||.... ++...+++|+.++.++++++. +.+ .++||++||.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 166 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV 166 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence 9999998887542 579999999997432 233478899999888877654 333 4699999999
Q ss_pred cccC---CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 209 CVQK---PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 209 ~~~~---~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
..+. ....|+.+|.+.+.+.+.++.+ ..|+++++|+||++..+..
T Consensus 167 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~ 216 (286)
T 3uve_A 167 GGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPML 216 (286)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTT
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcc
Confidence 8874 3567999999999999988875 5789999999999998763
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.86 E-value=5.3e-21 Score=181.68 Aligned_cols=168 Identities=14% Similarity=0.100 Sum_probs=132.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh----ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN----QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~----~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++||||||+|+||++++++|+++|++|++++|+..+............ ...++.++.+|++|.++++++++.+.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999987665432222222111 11468899999999999999998643
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||...+. ....|+.+|..
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a 161 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA 161 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHH
Confidence 469999999996431 23457889999988888874 556778999999998864 34689999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|.+.+.++.+ ..|+++++|+||.|..++
T Consensus 162 ~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred HHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 99999988875 579999999999998875
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-21 Score=175.95 Aligned_cols=171 Identities=17% Similarity=0.144 Sum_probs=133.8
Q ss_pred CCCCCCeEEEEcCCCh--hHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 81 KNPKDINILVVGSTGY--IGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.++++++||||||+|+ ||++++++|+++|++|++++|+.............. ...++.++.+|++|+++++++++.+
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL-DRNDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS-SSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc-CCCCceEEeCCCCCHHHHHHHHHHH
Confidence 3567899999999977 999999999999999999999854321111100111 1126899999999999999888754
Q ss_pred C---CCccEEEEcccccC-----C--------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEccccccC---CChhH
Q 043385 159 G---TSIDVVVSCLASRS-----G--------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~-----~--------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~~---~~~~y 217 (405)
. +++|+||||||... . .+...+++|+.++.++++++...- -++||++||..++. ....|
T Consensus 82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 161 (266)
T 3oig_A 82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVM 161 (266)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHH
T ss_pred HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchh
Confidence 2 46999999999753 1 123467899999999999987653 35999999998874 35689
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (266)
T 3oig_A 162 GVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLS 198 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 99999999999988875 568999999999998864
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-21 Score=178.53 Aligned_cols=167 Identities=16% Similarity=0.179 Sum_probs=131.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.++++++||||||+|+||++++++|+++|++|++++|+.++.... .+.+ ..++.++.+|++|.++++++++.+.
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~---~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~ 100 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKAL---ADEL--GNRAEFVSTNVTSEDSVLAAIEAANQ 100 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH--CTTEEEEECCTTCHHHHHHHHHHHTT
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHHh--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 346788999999999999999999999999999999987653211 1111 2468999999999999999888542
Q ss_pred -CCccEEEEccc-ccCC--------------CCcchhHhHHHHHHHHHHHHHh----------cCCCEEEEEccccccC-
Q 043385 160 -TSIDVVVSCLA-SRSG--------------GVKDSWKIDYEANRNSLVAGRN----------CGASHFVLLSAICVQK- 212 (405)
Q Consensus 160 -~~~d~Vv~~a~-~~~~--------------~~~~~~~~n~~g~~~ll~aa~~----------~~v~~~V~~Ss~~~~~- 212 (405)
+++|+||||++ .... .+...+++|+.++.++++++.. .+-++||++||..++.
T Consensus 101 ~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 180 (281)
T 3ppi_A 101 LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG 180 (281)
T ss_dssp SSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC
T ss_pred hCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC
Confidence 36899999944 3221 1345788999998888887642 2345999999998874
Q ss_pred --CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 213 --PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 213 --~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+...|+.+|.+.+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 181 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 224 (281)
T 3ppi_A 181 QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPI 224 (281)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchh
Confidence 3578999999999999888775 468999999999998864
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.7e-21 Score=174.16 Aligned_cols=170 Identities=14% Similarity=0.132 Sum_probs=133.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCC--CCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV--TNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~~~l~~~~~~~~ 159 (405)
.+++++|+||||+|+||++++++|+++|++|++++|++++.......+... ..+++.++.+|+ +|.+++.++++.+.
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA-GQPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc-CCCCceEEEeccccCCHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999876543211111111 114677888888 89998888776542
Q ss_pred ---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHH
Q 043385 160 ---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQR 219 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~ 219 (405)
+++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||...+. +...|+.
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~ 169 (247)
T 3i1j_A 90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGV 169 (247)
T ss_dssp HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHH
Confidence 469999999997421 23447789999988888876 555667999999988764 4578999
Q ss_pred HHHHHHHHHHHHhhh--c-CCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE--D-SGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~-~gi~~~ilRp~~v~g~~ 252 (405)
+|.+.+.+.+.++.+ . .++++++|+||.+..+.
T Consensus 170 sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~ 205 (247)
T 3i1j_A 170 SKFATEGLMQTLADELEGVTAVRANSINPGATRTGM 205 (247)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc
Confidence 999999999998876 2 68999999999998764
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-21 Score=182.95 Aligned_cols=169 Identities=16% Similarity=0.130 Sum_probs=130.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH-HHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL-ESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~~~~~~-- 159 (405)
.++++||||||+|+||++++++|+++|++|++++|+.++.......+... ...++.++.+|++|+ ++++++++.+.
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS-NHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999876543211111111 113689999999998 88877776432
Q ss_pred -CCccEEEEcccccCC---------------------------------------CCcchhHhHHHHHHHHHHHH----H
Q 043385 160 -TSIDVVVSCLASRSG---------------------------------------GVKDSWKIDYEANRNSLVAG----R 195 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------------------------------------~~~~~~~~n~~g~~~ll~aa----~ 195 (405)
+++|+||||||.... .++..+++|+.|+.++++++ +
T Consensus 89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~ 168 (311)
T 3o26_A 89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ 168 (311)
T ss_dssp HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence 469999999997521 12235789999977777665 4
Q ss_pred hcCCCEEEEEccccccC----------------------------------------------CChhHHHHHHHHHHHHH
Q 043385 196 NCGASHFVLLSAICVQK----------------------------------------------PLLEFQRAKLKFEAEMM 229 (405)
Q Consensus 196 ~~~v~~~V~~Ss~~~~~----------------------------------------------~~~~y~~sK~~~E~~~~ 229 (405)
+.+.++||++||..++. +...|+.+|++.+.+.+
T Consensus 169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~ 248 (311)
T 3o26_A 169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248 (311)
T ss_dssp TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence 45667999999987652 23679999999999999
Q ss_pred HHhhhcCCceEEEEecCCcccCc
Q 043385 230 KVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 230 ~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
.++.+-.++++++|+||+|..++
T Consensus 249 ~la~e~~~i~v~~v~PG~v~T~~ 271 (311)
T 3o26_A 249 VLANKIPKFQVNCVCPGLVKTEM 271 (311)
T ss_dssp HHHHHCTTSEEEEECCCSBCSGG
T ss_pred HHHhhcCCceEEEecCCceecCC
Confidence 99987567999999999998875
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-21 Score=177.61 Aligned_cols=170 Identities=14% Similarity=0.109 Sum_probs=132.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++++||||||+|+||++++++|+++|++|++++|+....... ..+.+. ...++.++.+|++|++++.++++.+.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADA--LKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH--HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH--HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999965432100 001111 12478999999999999988887542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||..++ .+...|+.+|
T Consensus 104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 183 (271)
T 4iin_A 104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASK 183 (271)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHH
Confidence 469999999997542 23457789999987766655 44567899999998775 4567899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.+.+.+.++.+ ..++++++++||.+..+..
T Consensus 184 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 217 (271)
T 4iin_A 184 GGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMN 217 (271)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCch
Confidence 9999999988875 5799999999999988753
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=172.84 Aligned_cols=160 Identities=19% Similarity=0.159 Sum_probs=130.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|++|||||+++||++++++|+++|++|++++|+.... ......+++|++|+++++++++.+.
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQR 75 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999976432 1234578899999999988877653
Q ss_pred -CCccEEEEcccccCC-----------CCcchhHhHHHHHHHH----HHHHHhcCCCEEEEEccccccCC----ChhHHH
Q 043385 160 -TSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNS----LVAGRNCGASHFVLLSAICVQKP----LLEFQR 219 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~l----l~aa~~~~v~~~V~~Ss~~~~~~----~~~y~~ 219 (405)
+++|++|||||.... +|+..+++|+.++..+ +..+++.+-++||++||.....+ ...|+.
T Consensus 76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~a 155 (261)
T 4h15_A 76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAA 155 (261)
T ss_dssp TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHH
T ss_pred cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHH
Confidence 689999999996321 2345778999986554 44556667789999999887633 357999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+|.+++.+.+.++.| .+||+++.|.||++-.+..
T Consensus 156 sKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~ 191 (261)
T 4h15_A 156 AKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEAS 191 (261)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcch
Confidence 999999999998876 6799999999999987653
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=178.06 Aligned_cols=169 Identities=16% Similarity=0.189 Sum_probs=134.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchh----Hhhhc-cCCcEEEEcCCCCHHHHHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKE----ETLNQ-LQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~----~~~~~-~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
.+++++||||||+|+||++++++|+++|++|++++|+.++.......+ +.+.. ..++.++.+|++|+++++++++
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 567899999999999999999999999999999999987654322111 11211 2367889999999999998887
Q ss_pred hhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccCC-----Ch
Q 043385 157 NLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQKP-----LL 215 (405)
Q Consensus 157 ~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~~-----~~ 215 (405)
.+. +++|+||||||.... .++..+++|+.++.++++++ ++.+.++||++||...+.+ ..
T Consensus 122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~ 201 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHC 201 (346)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCch
Confidence 542 579999999997532 23457899999988888876 4556789999999887643 56
Q ss_pred hHHHHHHHHHHHHHHHhhh-cCCceEEEEecCCccc
Q 043385 216 EFQRAKLKFEAEMMKVAEE-DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 216 ~y~~sK~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g 250 (405)
.|+.+|.+.+.+.+.++.| ..++++++|.||.++.
T Consensus 202 ~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~ 237 (346)
T 3kvo_A 202 AYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIH 237 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccc
Confidence 8999999999999998875 3689999999996443
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.9e-21 Score=174.81 Aligned_cols=167 Identities=15% Similarity=0.081 Sum_probs=129.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
+++||||||+|+||++++++|+++|++|++++|+.++.......+.. ....++.++.+|++|++++.++++.+. ++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ-EQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-hcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 57899999999999999999999999999999987654321111111 122478899999999999988876432 46
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh---cCCCEEEEEccccccC---CChhHHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN---CGASHFVLLSAICVQK---PLLEFQRAKLKFEA 226 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~---~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~ 226 (405)
+|+||||||.... ++...+++|+.++.++++++.. .+.+++|++||..... ....|+.+|.+.+.
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~ 160 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARA 160 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHH
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHHH
Confidence 9999999997532 2334788999999888887653 2345788888776653 34679999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCc
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+..+..++++++++||.+..++
T Consensus 161 ~~~~l~~~~~~i~v~~v~PG~v~T~~ 186 (235)
T 3l77_A 161 LVRTFQIENPDVRFFELRPGAVDTYF 186 (235)
T ss_dssp HHHHHHHHCTTSEEEEEEECSBSSST
T ss_pred HHHHHhhcCCCeEEEEEeCCcccccc
Confidence 99988665679999999999998764
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.85 E-value=8.6e-21 Score=177.12 Aligned_cols=168 Identities=18% Similarity=0.149 Sum_probs=130.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-CCcCCCCchhHhh--hccCCcEEEEcCCCC----HHHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK-SGIRGRNDKEETL--NQLQGASVCFSDVTN----LESLEKS 154 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~--~~~~~v~~~~~Dl~d----~~~l~~~ 154 (405)
++++++||||||+|+||++++++|+++|++|++++|+. ++..... +.+ ....++.++.+|++| +++++++
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~---~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~ 96 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLA---DELNKERSNTAVVCQADLTNSNVLPASCEEI 96 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH---HHHHHHSTTCEEEEECCCSCSTTHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH---HHHHhhcCCceEEEEeecCCccCCHHHHHHH
Confidence 46678999999999999999999999999999999987 4332111 111 112468899999999 8888888
Q ss_pred HHhhC---CCccEEEEcccccCCC-------------------CcchhHhHHHHHHHHHHHHHh----cC------CCEE
Q 043385 155 LENLG---TSIDVVVSCLASRSGG-------------------VKDSWKIDYEANRNSLVAGRN----CG------ASHF 202 (405)
Q Consensus 155 ~~~~~---~~~d~Vv~~a~~~~~~-------------------~~~~~~~n~~g~~~ll~aa~~----~~------v~~~ 202 (405)
++.+. +++|+||||||..... +...+++|+.++.++++++.. .+ .++|
T Consensus 97 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i 176 (288)
T 2x9g_A 97 INSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI 176 (288)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence 77432 4699999999964311 123678999998888877653 23 4699
Q ss_pred EEEccccccC---CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 203 VLLSAICVQK---PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 203 V~~Ss~~~~~---~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|++||..++. +...|+.+|.+.+.+.+.++.+ ..|+++++|+||+++++.
T Consensus 177 v~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 177 VNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp EEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred EEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 9999998874 3567999999999999988775 469999999999999986
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.4e-21 Score=174.27 Aligned_cols=162 Identities=19% Similarity=0.180 Sum_probs=130.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+|++|||||+|+||++++++|+++| +.|++++|+.++.... .+.. ..++.++.+|++|+++++++++.+.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKL---KEKY--GDRFFYVVGDITEDSVLKQLVNAAVKGH 76 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHH---HHHH--GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHH---HHHh--CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 5799999999999999999999985 7899999986543211 0111 2368899999999999998887542
Q ss_pred CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.++.++++++ ++.+ ++||++||..++. +...|+.+|.
T Consensus 77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~ 155 (254)
T 3kzv_A 77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKA 155 (254)
T ss_dssp SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHH
T ss_pred CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHH
Confidence 579999999997421 23347889999988888776 5555 7999999998874 4578999999
Q ss_pred HHHHHHHHHhhhcCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+..++++++|+||.+..+.
T Consensus 156 a~~~~~~~la~e~~~i~vn~v~PG~v~t~~ 185 (254)
T 3kzv_A 156 ALNHFAMTLANEERQVKAIAVAPGIVDTDM 185 (254)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEECSSCCCCC
T ss_pred HHHHHHHHHHhhccCcEEEEEeCCcccchh
Confidence 999999999986679999999999998875
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6e-21 Score=173.46 Aligned_cols=158 Identities=16% Similarity=0.184 Sum_probs=128.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
.++|+||||||+|+||++++++|+++|++|++++|++++.. ....++.+|++|+++++++++.+.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~ 72 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLL 72 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 35689999999999999999999999999999999876532 134677899999999988887431
Q ss_pred --CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|+||||||.... .++..+++|+.++.++++++... .-++||++||..++. +...|+.+|.
T Consensus 73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 152 (241)
T 1dhr_A 73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKG 152 (241)
T ss_dssp TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHH
Confidence 369999999996431 12346789999999999888653 125999999998874 4578999999
Q ss_pred HHHHHHHHHhhh----cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE----DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|+++++|+||++-.+.
T Consensus 153 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~ 186 (241)
T 1dhr_A 153 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM 186 (241)
T ss_dssp HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred HHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc
Confidence 999999998875 457999999999987764
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.9e-21 Score=176.25 Aligned_cols=170 Identities=17% Similarity=0.169 Sum_probs=130.8
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-CCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHh
Q 043385 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK-SGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 80 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
..++++++||||||+|+||++++++|+++|++|+++++.. +.... ..+.+ ....++.++.+|++|+++++++++.
T Consensus 21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~---~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 97 (267)
T 4iiu_A 21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQE---TLNAIVANGGNGRLLSFDVANREQCREVLEH 97 (267)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH---HHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHH---HHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 3456778999999999999999999999999998766543 22211 11111 1235789999999999999888875
Q ss_pred hC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH-----hcCCCEEEEEcccccc---CCChhH
Q 043385 158 LG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR-----NCGASHFVLLSAICVQ---KPLLEF 217 (405)
Q Consensus 158 ~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~-----~~~v~~~V~~Ss~~~~---~~~~~y 217 (405)
+. +++|+||||||.... ++...+++|+.++.++++++. +.+.++||++||..++ .+...|
T Consensus 98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 177 (267)
T 4iiu_A 98 EIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNY 177 (267)
T ss_dssp HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHH
T ss_pred HHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchh
Confidence 32 469999999997542 234478899999999888763 4566799999998775 456789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+.+.++.+ ..|+++++++||.+..+.
T Consensus 178 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 214 (267)
T 4iiu_A 178 SAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGM 214 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCc
Confidence 99999999988888775 468999999999999875
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.9e-21 Score=173.39 Aligned_cols=158 Identities=18% Similarity=0.111 Sum_probs=130.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVS-RGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~ 161 (405)
++|+||||||+|+||++++++|++ .|+.|++++|+++.. ...+.++.+|++|+++++++++.+. ++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 70 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS------------AENLKFIKADLTKQQDITNVLDIIKNVS 70 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC------------CTTEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc------------cccceEEecCcCCHHHHHHHHHHHHhCC
Confidence 468899999999999999999999 789999999886522 1357899999999999999886432 46
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcCC--CEEEEEccccccC---CChhHHHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCGA--SHFVLLSAICVQK---PLLEFQRAKLKFEAE 227 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~v--~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~ 227 (405)
+|+||||||.... +++..+++|+.++.++++++...-. ++||++||..++. +...|+.+|.+.+.+
T Consensus 71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~ 150 (244)
T 4e4y_A 71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQM 150 (244)
T ss_dssp EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHH
T ss_pred CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHH
Confidence 9999999997532 2345789999999999998876422 4899999998874 356899999999999
Q ss_pred HHHHhhh--cCCceEEEEecCCcccCch
Q 043385 228 MMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 228 ~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+.++.| ..|+++++|+||.+..+..
T Consensus 151 ~~~la~e~~~~gi~v~~v~PG~v~T~~~ 178 (244)
T 4e4y_A 151 TKSLALDLAKYQIRVNTVCPGTVDTDLY 178 (244)
T ss_dssp HHHHHHHHGGGTCEEEEEEESCBCCHHH
T ss_pred HHHHHHHHHHcCeEEEEEecCccCchhh
Confidence 9988875 5799999999999998753
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.85 E-value=3e-21 Score=177.75 Aligned_cols=172 Identities=12% Similarity=0.153 Sum_probs=130.1
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.++++++||||||+|+||++++++|+++|++|++++|..............+.. ..++.++.+|++|+++++++++.+.
T Consensus 7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999998865432111111112221 2368889999999999998887542
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... +++..+++|+.++.++++++... +.++||++||...+ .....|+.+|.
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKa 166 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKA 166 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----C
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHH
Confidence 579999999996532 23346789999999999998764 34699999998776 44578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|+++++|+||.+..++
T Consensus 167 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 198 (262)
T 3ksu_A 167 PVEHYTRAASKELMKQQISVNAIAPGPMDTSF 198 (262)
T ss_dssp HHHHHHHHHHHHTTTTTCEEEEEEECCCCTHH
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence 999999998876 468999999999998764
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.6e-21 Score=174.28 Aligned_cols=166 Identities=17% Similarity=0.162 Sum_probs=134.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|++|||||+++||+++++.|+++|++|++++|+.+++... .+.+ ..++..+++|++|+++++++++.+.
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~---~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 100 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAA---IAEI--GGGAVGIQADSANLAELDRLYEKVKAE 100 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH--CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHc--CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999987654311 1112 2467889999999999998887653
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
+++|++|||||.... +|+..+++|+.|+..+.+++... .-++||++||..... ....|+.+|.++
T Consensus 101 ~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav 180 (273)
T 4fgs_A 101 AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAAL 180 (273)
T ss_dssp HSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHH
Confidence 789999999996432 34568899999998888877543 125899999998764 346899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..+.+.++.| ..||+++.|.||.+..+.
T Consensus 181 ~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~ 210 (273)
T 4fgs_A 181 RSFARNWILDLKDRGIRINTLSPGPTETTG 210 (273)
T ss_dssp HHHHHHHHHHTTTSCEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHhcccCeEEEEEeeCCCCChh
Confidence 9999998876 679999999999997653
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=176.73 Aligned_cols=169 Identities=13% Similarity=0.093 Sum_probs=133.3
Q ss_pred CCCCCCeEEEEcCCCh--hHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 81 KNPKDINILVVGSTGY--IGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
..+++++||||||+|+ ||++++++|+++|++|++++|++..... ..+......++.++.+|++|+++++++++.+
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR---VEPLAEELGAFVAGHCDVADAASIDAVFETL 103 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH---HHHHHHHHTCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH---HHHHHHhcCCceEEECCCCCHHHHHHHHHHH
Confidence 3567899999999977 9999999999999999999998532110 0111122346889999999999999888754
Q ss_pred C---CCccEEEEcccccC-----C--------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEccccccC---CChhH
Q 043385 159 G---TSIDVVVSCLASRS-----G--------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~-----~--------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~~---~~~~y 217 (405)
. +++|+||||||... . ++...+++|+.++.++++++...- .++||++||...+. ....|
T Consensus 104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y 183 (293)
T 3grk_A 104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVM 183 (293)
T ss_dssp HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHH
T ss_pred HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHH
Confidence 2 57999999999753 1 233478899999999999887642 35999999998874 45789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+.+.++.+ ..|+++++|+||++..+.
T Consensus 184 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 220 (293)
T 3grk_A 184 GVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLA 220 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchh
Confidence 99999999999988875 569999999999999864
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.2e-21 Score=176.61 Aligned_cols=166 Identities=15% Similarity=0.167 Sum_probs=126.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-ecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAI-AREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++||||||+|+||++++++|+++|++|+++ .|+.+...... ..+. ...++.++.+|++|+++++++++.+.
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVV---AAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH---HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHH---HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999887 45443321111 1111 12468899999999999998887542
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhc-------CCCEEEEEccccccC----CChhH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNC-------GASHFVLLSAICVQK----PLLEF 217 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~-------~v~~~V~~Ss~~~~~----~~~~y 217 (405)
+++|+||||||.... ++...+++|+.++.++++++... +.++||++||..++. ....|
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y 181 (272)
T 4e3z_A 102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDY 181 (272)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHH
T ss_pred CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchh
Confidence 468999999997532 12347889999998888876543 356899999987752 34679
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+++.++.+ ..|+++++|+||.+.++.
T Consensus 182 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 218 (272)
T 4e3z_A 182 AASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL 218 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCc
Confidence 99999999999888775 469999999999999875
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.5e-21 Score=182.29 Aligned_cols=167 Identities=18% Similarity=0.101 Sum_probs=131.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEe-cCCCCcCCCCchhHhhh--ccCCcEEEEcCCCCHH----------
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIA-REKSGIRGRNDKEETLN--QLQGASVCFSDVTNLE---------- 149 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~---------- 149 (405)
+++++||||||+|+||++++++|+++|++|++++ |++++..... +.+. ...++.++.+|++|++
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 120 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS---ATLNARRPNSAITVQADLSNVATAPVSGADGS 120 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH---HHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence 5678999999999999999999999999999999 8765432111 1111 1246889999999998
Q ss_pred -------HHHHHHHhhC---CCccEEEEcccccCC-----------------------CCcchhHhHHHHHHHHHHHHH-
Q 043385 150 -------SLEKSLENLG---TSIDVVVSCLASRSG-----------------------GVKDSWKIDYEANRNSLVAGR- 195 (405)
Q Consensus 150 -------~l~~~~~~~~---~~~d~Vv~~a~~~~~-----------------------~~~~~~~~n~~g~~~ll~aa~- 195 (405)
+++++++.+. +++|+||||||.... ++...+++|+.++.++++++.
T Consensus 121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 200 (328)
T 2qhx_A 121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 200 (328)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877432 469999999996431 112367899999887777654
Q ss_pred ---hcC------CCEEEEEccccccC---CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 196 ---NCG------ASHFVLLSAICVQK---PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 196 ---~~~------v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+ .++||++||..++. +...|+.+|.+++.+.+.++.+ ..|+++++|+||++..+.
T Consensus 201 ~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 271 (328)
T 2qhx_A 201 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 271 (328)
T ss_dssp HHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred HHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence 445 67999999998874 3568999999999999988875 469999999999999876
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.7e-21 Score=179.18 Aligned_cols=168 Identities=18% Similarity=0.100 Sum_probs=131.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEe-cCCCCcCCCCchhHhhh--ccCCcEEEEcCCCCHH---------
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIA-REKSGIRGRNDKEETLN--QLQGASVCFSDVTNLE--------- 149 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~--------- 149 (405)
.+++++||||||+|+||++++++|+++|++|++++ |+.++..... +.+. ...++.++.+|++|++
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS---ATLNARRPNSAITVQADLSNVATAPVSGADG 82 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH---HHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHHhhhcCCeeEEEEeecCCccccccccccc
Confidence 46778999999999999999999999999999999 8765432111 1111 1246889999999999
Q ss_pred --------HHHHHHHhhC---CCccEEEEcccccCC-----------------------CCcchhHhHHHHHHHHHHHHH
Q 043385 150 --------SLEKSLENLG---TSIDVVVSCLASRSG-----------------------GVKDSWKIDYEANRNSLVAGR 195 (405)
Q Consensus 150 --------~l~~~~~~~~---~~~d~Vv~~a~~~~~-----------------------~~~~~~~~n~~g~~~ll~aa~ 195 (405)
++.++++.+. +++|+||||||.... .+...+++|+.++.++++++.
T Consensus 83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 162 (291)
T 1e7w_A 83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA 162 (291)
T ss_dssp CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence 8888877542 469999999996431 122467899999888777654
Q ss_pred ----hcC------CCEEEEEccccccC---CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 196 ----NCG------ASHFVLLSAICVQK---PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 196 ----~~~------v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+ .++||++||...+. +...|+.+|...+.+.+.++.+ ..|+++++|+||++..++
T Consensus 163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 234 (291)
T 1e7w_A 163 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 234 (291)
T ss_dssp HHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred HHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence 445 57999999998874 3568999999999999988775 569999999999998775
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=170.53 Aligned_cols=165 Identities=15% Similarity=0.160 Sum_probs=133.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
++++|++|||||+++||+++++.|+++|++|++.+|+.... ..+.+ ....++..+.+|++|+++++++++. +
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~-----~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~--g 78 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDE-----TLDIIAKDGGNASALLIDFADPLAAKDSFTD--A 78 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHH-----HHHHHHHTTCCEEEEECCTTSTTTTTTSSTT--T
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHH-----HHHHHHHhCCcEEEEEccCCCHHHHHHHHHh--C
Confidence 57899999999999999999999999999999999975421 11112 2234688999999999988887765 6
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcC-CCEEEEEccccccC---CChhHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCG-ASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~-v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
++|++|||||.... +|+..+++|+.|+..+.++ +++.+ -++||++||..... ....|+.+|..
T Consensus 79 ~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaa 158 (247)
T 4hp8_A 79 GFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHG 158 (247)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHH
Confidence 89999999997532 3556889999996666554 44444 47999999998764 34689999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+..+.+.++.| .+||+++.|.||+|-.|..
T Consensus 159 v~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~ 190 (247)
T 4hp8_A 159 VAGLTKLLANEWAAKGINVNAIAPGYIETNNT 190 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred HHHHHHHHHHHHhhcCeEEEEEeeCCCCCcch
Confidence 99999998876 6899999999999987753
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=7e-21 Score=175.72 Aligned_cols=168 Identities=17% Similarity=0.175 Sum_probs=128.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++|||||+|+||++++++|+++|++|++++++..... ....+.+. ...++.++.+|++|+++++++++.+.
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAA--EEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHH--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH--HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999998865543211 00001111 12468899999999999998887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc---CCChhHHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ---KPLLEFQRAKLKF 224 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~---~~~~~y~~sK~~~ 224 (405)
+++|+||||||.... .++..+++|+.++.++++++... .-++||++||..++ .....|+.+|.+.
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 182 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGV 182 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHH
Confidence 579999999997532 23456789999999999887653 23589999998765 3457899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.+ ..|+++++|+||.+..+.
T Consensus 183 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (267)
T 3u5t_A 183 EAMTHVLSKELRGRDITVNAVAPGPTATDL 212 (267)
T ss_dssp HHHHHHHHHHTTTSCCEEEEEEECCBC---
T ss_pred HHHHHHHHHHhhhhCCEEEEEEECCCcCcc
Confidence 9999998876 469999999999998775
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.4e-21 Score=175.79 Aligned_cols=169 Identities=17% Similarity=0.128 Sum_probs=130.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++++|+||||+|+||++++++|+++|++|++++|+..... ....... ....++.++.+|++|+++++++++.+.
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHV--STWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHH--HHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHH--HHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999985543211 0000111 122478999999999999988887542
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEcccccc---CCChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQ---KPLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~---~~~~~y~~sK~ 222 (405)
+++|+||||||.... ++...+++|+.++.++++++. +.+.++||++||...+ .+...|+.+|.
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 180 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKA 180 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHH
Confidence 469999999997532 233478899999888777653 4566799999998776 34578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+.+.+.++.+ ..|+++++++||.+..+..
T Consensus 181 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 213 (269)
T 3gk3_A 181 GIHGFTKTLALETAKRGITVNTVSPGYLATAMV 213 (269)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTT
T ss_pred HHHHHHHHHHHHhhhcCCEEEEEecCcccchhh
Confidence 999999888775 4689999999999998764
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=175.08 Aligned_cols=206 Identities=13% Similarity=0.135 Sum_probs=147.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++++||||||+|+||++++++|+++|++|++++|++++........... ...++.++.+|++|.++++++++.+.
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL-GAASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-TCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 56789999999999999999999999999999999876542111111111 11257889999999999988877431
Q ss_pred CCccEEEEc-ccccCC--------CCcchhHhHHHHHHHHHHHHHhc---CCCEEEEEccccccC---CChhHHHHHHHH
Q 043385 160 TSIDVVVSC-LASRSG--------GVKDSWKIDYEANRNSLVAGRNC---GASHFVLLSAICVQK---PLLEFQRAKLKF 224 (405)
Q Consensus 160 ~~~d~Vv~~-a~~~~~--------~~~~~~~~n~~g~~~ll~aa~~~---~v~~~V~~Ss~~~~~---~~~~y~~sK~~~ 224 (405)
+++|+|||| +|.... .+...+++|+.|+.++++++... +.++||++||..++. +...|+.+|...
T Consensus 105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 184 (286)
T 1xu9_A 105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFAL 184 (286)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHHHHH
Confidence 469999999 564322 12346789999988888876432 247999999998874 357899999999
Q ss_pred HHHHHHHhhh----cCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeeehhhcccccccceEeccCCCCCCCHH
Q 043385 225 EAEMMKVAEE----DSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQILPIGGPGKALTPL 300 (405)
Q Consensus 225 E~~~~~~~~~----~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~~~~y~i~~~g~~~t~~ 300 (405)
|.+++.++.+ ..++++++++||.+..+...- .. .+ . . .. ..++..
T Consensus 185 ~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~---~~---------~~-----------~------~-~~-~~~~~~ 233 (286)
T 1xu9_A 185 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK---AV---------SG-----------I------V-HM-QAAPKE 233 (286)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH---HS---------CG-----------G------G-GG-GCBCHH
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHH---hc---------cc-----------c------c-cC-CCCCHH
Confidence 9998887654 369999999999998764311 00 00 0 0 01 356788
Q ss_pred HHHHHHHHHcCCCCCeeecC
Q 043385 301 EQGEILFRLLGKEPKFLKVP 320 (405)
Q Consensus 301 ela~~l~~~~g~~~~~~~~p 320 (405)
|+++.+.+.+..+.....+|
T Consensus 234 ~vA~~i~~~~~~~~~~~~~~ 253 (286)
T 1xu9_A 234 ECALEIIKGGALRQEEVYYD 253 (286)
T ss_dssp HHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHhcCCceEEec
Confidence 99998888775544444445
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-20 Score=173.64 Aligned_cols=165 Identities=15% Similarity=0.138 Sum_probs=129.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|+||||||+|+||++++++|+++|++|++++|+.++.... .. ....++.++.+|++|++++.++++.+.
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~----~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLREL----EV-AHGGNAVGVVGDVRSLQDQKRAAERCLAA 76 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HH-HTBTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHH----HH-HcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 35688999999999999999999999999999999987543210 11 112478899999999999988887642
Q ss_pred -CCccEEEEcccccCC--------------CCcchhHhHHHHHHHHHHHHHh----cCCCEEEEEccccccC---CChhH
Q 043385 160 -TSIDVVVSCLASRSG--------------GVKDSWKIDYEANRNSLVAGRN----CGASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~--------------~~~~~~~~n~~g~~~ll~aa~~----~~v~~~V~~Ss~~~~~---~~~~y 217 (405)
+++|+||||||.... .++..+++|+.++.++++++.. .+ ++||++||...+. +...|
T Consensus 77 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y 155 (281)
T 3zv4_A 77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLY 155 (281)
T ss_dssp HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHH
T ss_pred cCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchh
Confidence 579999999997421 1334678999998888877643 33 6999999998874 34679
Q ss_pred HHHHHHHHHHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+.+.++.+ ...++++.|.||.+..+.
T Consensus 156 ~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~ 191 (281)
T 3zv4_A 156 TATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDL 191 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCc
Confidence 99999999999998876 234999999999998764
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=169.47 Aligned_cols=171 Identities=16% Similarity=0.097 Sum_probs=132.2
Q ss_pred CCCCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 81 KNPKDINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 81 ~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.++++|+++||||+| +||+++++.|+++|++|++.+|+++......+..+... ..++.++++|++|+++++++++.+
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHH
Confidence 467899999999886 89999999999999999999998765432222222221 236889999999999998888765
Q ss_pred C---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhH
Q 043385 159 G---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y 217 (405)
. +++|++|||||.... ++...+++|+.+...+..++... +-++||++||..... ....|
T Consensus 81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y 160 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVM 160 (256)
T ss_dssp HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHH
T ss_pred HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhh
Confidence 3 689999999996421 11124567888877777666543 235899999998764 34679
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|..++.+.+.++.| .+||+++.|.||.+-.+.
T Consensus 161 ~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~ 197 (256)
T 4fs3_A 161 GVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLS 197 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChh
Confidence 99999999999998876 679999999999987654
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-20 Score=171.61 Aligned_cols=170 Identities=12% Similarity=0.152 Sum_probs=131.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHh---CCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVS---RGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++++++|||||+|+||++++++|++ +|++|++++|++++.......+.......++.++.+|++|+++++++++.+.
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 5678999999999999999999999 8999999999875432111111111012357889999999999988887642
Q ss_pred -----CCcc--EEEEcccccCC------------CCcchhHhHHHHHHHHHHHHHhc------CCCEEEEEccccccC--
Q 043385 160 -----TSID--VVVSCLASRSG------------GVKDSWKIDYEANRNSLVAGRNC------GASHFVLLSAICVQK-- 212 (405)
Q Consensus 160 -----~~~d--~Vv~~a~~~~~------------~~~~~~~~n~~g~~~ll~aa~~~------~v~~~V~~Ss~~~~~-- 212 (405)
+++| +||||||.... +++..+++|+.++.++++++... +.++||++||..++.
T Consensus 84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 163 (259)
T 1oaa_A 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY 163 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC
Confidence 3578 99999996421 12336789999999999888643 345899999998874
Q ss_pred -CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCc
Q 043385 213 -PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 213 -~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
+...|+.+|.+.+.+.+.++.+-.++++++|.||.+-.++
T Consensus 164 ~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~ 204 (259)
T 1oaa_A 164 KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM 204 (259)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH
T ss_pred CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch
Confidence 3568999999999999999886446999999999997764
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.82 E-value=8.3e-20 Score=168.42 Aligned_cols=171 Identities=15% Similarity=0.103 Sum_probs=133.9
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCc-CCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 82 NPKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGI-RGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 82 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
++++++|+||||+ |+||++++++|+++|++|++++|+..+. ......+.. ....++.++.+|++|+++++++++.+
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEK-TYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHH-HHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHH-hcCCceeEEecCCCCHHHHHHHHHHH
Confidence 5678999999999 9999999999999999999999987653 111111111 11247889999999999999888765
Q ss_pred C---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC-----CChhH
Q 043385 159 G---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK-----PLLEF 217 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~-----~~~~y 217 (405)
. +++|+||||||.... ++...+++|+.++.++++++ ++.+.++||++||...+. +...|
T Consensus 96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y 175 (267)
T 3gdg_A 96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSY 175 (267)
T ss_dssp HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHH
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcc
Confidence 2 578999999997532 23347889999988887776 556678999999987752 34689
Q ss_pred HHHHHHHHHHHHHHhhh-cCCceEEEEecCCcccCch
Q 043385 218 QRAKLKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+|.+.+.+.+.++.+ ...++++.+.||.+..+..
T Consensus 176 ~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~ 212 (267)
T 3gdg_A 176 NVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLS 212 (267)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCG
T ss_pred hHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchh
Confidence 99999999999998876 2238999999999987753
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-20 Score=170.44 Aligned_cols=160 Identities=18% Similarity=0.176 Sum_probs=111.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHH---HHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLE---KSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~---~~~~~~~ 159 (405)
+++++||||||+|+||++++++|++ |+.|++++|++++. .......++.++.+|+.|.+... +.++. .
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~ 73 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHL-------AALAEIEGVEPIESDIVKEVLEEGGVDKLKN-L 73 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHH-------HHHHTSTTEEEEECCHHHHHHTSSSCGGGTT-C
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHH-------HHHHhhcCCcceecccchHHHHHHHHHHHHh-c
Confidence 5678999999999999999999988 99999999987543 22333457899999998875421 11221 1
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|+||||||.... ++...+++|+.++.++++++ ++.+ ++||++||..++. +...|+.+|.+
T Consensus 74 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a 152 (245)
T 3e9n_A 74 DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHA 152 (245)
T ss_dssp SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHH
Confidence 469999999997532 23456789999976666654 4444 7999999998874 45789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.+ ..|+++++++||.+.++.
T Consensus 153 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 183 (245)
T 3e9n_A 153 LRGLADAFRKEEANNGIRVSTVSPGPTNTPM 183 (245)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCCccCch
Confidence 99999988875 478999999999999875
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=168.17 Aligned_cols=166 Identities=16% Similarity=0.057 Sum_probs=131.0
Q ss_pred CCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 82 NPKDINILVVGS--TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 82 ~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.+++++|+|||| +|+||++++++|+++|++|++++|+.++.. . ..... ..++.++.+|++|+++++++++.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI---Q--RITDRLPAKAPLLELDVQNEEHLASLAGRV 78 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHH---H--HHHTTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHH---H--HHHHhcCCCceEEEccCCCHHHHHHHHHHH
Confidence 467789999999 999999999999999999999999864310 0 11111 135788999999999999888754
Q ss_pred C---C---CccEEEEcccccC------C--------CCcchhHhHHHHHHHHHHHHHhcC--CCEEEEEcccccc--CCC
Q 043385 159 G---T---SIDVVVSCLASRS------G--------GVKDSWKIDYEANRNSLVAGRNCG--ASHFVLLSAICVQ--KPL 214 (405)
Q Consensus 159 ~---~---~~d~Vv~~a~~~~------~--------~~~~~~~~n~~g~~~ll~aa~~~~--v~~~V~~Ss~~~~--~~~ 214 (405)
. + ++|+||||||... . ++...+++|+.++.++++++...- -++||++||...+ ...
T Consensus 79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~ 158 (269)
T 2h7i_A 79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAY 158 (269)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTT
T ss_pred HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccCch
Confidence 2 3 6999999999653 1 123467899999999999987531 2599999998765 345
Q ss_pred hhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 215 LEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 215 ~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..|+.+|...+.+.+.++.+ ..|+++++|+||++..+.
T Consensus 159 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 198 (269)
T 2h7i_A 159 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLA 198 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchh
Confidence 78999999999999988775 579999999999998764
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.7e-20 Score=167.77 Aligned_cols=167 Identities=15% Similarity=0.157 Sum_probs=130.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC-CCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE-KSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~-~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++|+||||+|+||++++++|+++|++|+++.++ .+..... ...+. ....+.++.+|++|.++++++++.+.
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEET---VYEIQSNGGSAFSIGANLESLHGVEALYSSLDN 81 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHH---HHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHH---HHHHHhcCCceEEEecCcCCHHHHHHHHHHHHH
Confidence 567899999999999999999999999999887544 3322111 11111 12467889999999999888776542
Q ss_pred --------CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhH
Q 043385 160 --------TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 160 --------~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y 217 (405)
+++|+||||||.... .++..+++|+.++.++++++... +.++||++||...+. ....|
T Consensus 82 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y 161 (255)
T 3icc_A 82 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAY 161 (255)
T ss_dssp HHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHH
T ss_pred HhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchh
Confidence 249999999997532 12346789999999999998764 345899999998874 34789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|++.+.+.+.++.+ ..|+++++++||.+..+.
T Consensus 162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 198 (255)
T 3icc_A 162 SMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDM 198 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSS
T ss_pred HHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccc
Confidence 99999999999988875 468999999999998875
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=165.13 Aligned_cols=161 Identities=10% Similarity=0.017 Sum_probs=118.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
|+||||||+|+||++++++|+++|++|++++|++++..... + +.. ..++..+ |..+.+.+.+.+....+++|+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~-l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~ 75 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE---A-FAETYPQLKPM--SEQEPAELIEAVTSAYGQVDV 75 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH---H-HHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---H-HHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCE
Confidence 68999999999999999999999999999999876542111 1 111 1233333 554444332222111146999
Q ss_pred EEEccccc-CC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEccccccC---CChhHHHHHHHHHHH
Q 043385 165 VVSCLASR-SG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQK---PLLEFQRAKLKFEAE 227 (405)
Q Consensus 165 Vv~~a~~~-~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~~ 227 (405)
||||||.. .. +++..+++|+.++.++++++ ++.+.++||++||..++. +...|+.+|.+.+.+
T Consensus 76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 155 (254)
T 1zmt_A 76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL 155 (254)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHH
Confidence 99999975 21 23447889999988877765 355678999999998874 456899999999999
Q ss_pred HHHHhhh--cCCceEEEEecCCcccCc
Q 043385 228 MMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 228 ~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.++.+ ..|+++++|+||.++|+.
T Consensus 156 ~~~la~e~~~~gi~v~~v~PG~v~~~~ 182 (254)
T 1zmt_A 156 ANALSKELGEYNIPVFAIGPNYLHSED 182 (254)
T ss_dssp HHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred HHHHHHHhhhcCcEEEEEecCcccccc
Confidence 9988775 469999999999998864
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=161.87 Aligned_cols=161 Identities=16% Similarity=0.141 Sum_probs=117.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-e--cCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAI-A--REKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l-~--r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+|+||||||+|+||++++++|+++|++|+++ + |++++.. .......+.++. |..+.+.+.+.+....++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~------~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~ 72 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQ------RFESENPGTIAL--AEQKPERLVDATLQHGEA 72 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH------HHHHHSTTEEEC--CCCCGGGHHHHHGGGSSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHH------HHHHHhCCCccc--CHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999 6 8765432 111111133322 444443333322221257
Q ss_pred ccEEEEcccccCC------------CCcchhHhHHHHHHHHHHHHH----hcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 162 IDVVVSCLASRSG------------GVKDSWKIDYEANRNSLVAGR----NCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 162 ~d~Vv~~a~~~~~------------~~~~~~~~n~~g~~~ll~aa~----~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+|+||||||.... +++..+++|+.++.++++++. +.+.++||++||..++. +...|+.+|.
T Consensus 73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 152 (244)
T 1zmo_A 73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARA 152 (244)
T ss_dssp EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHH
T ss_pred CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHH
Confidence 9999999996532 123477899999888777654 56678999999998874 3468999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.+.+.+.++.+ ..|+++++|+||.+..+..
T Consensus 153 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 185 (244)
T 1zmo_A 153 ATVALVESAAKTLSRDGILLYAIGPNFFNNPTY 185 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence 999999988775 4699999999999988764
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=174.88 Aligned_cols=162 Identities=15% Similarity=0.139 Sum_probs=129.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+++||||||+|+||.+++++|+++|+ +|++++|+.............+.. ..++.++.+|++|.+++.+++++ ++
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~--~~ 335 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA--YP 335 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH--SC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc--CC
Confidence 467999999999999999999999998 599999986432211111222222 23588899999999999999987 57
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccccc---CCChhHHHHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQ---KPLLEFQRAKLKFEAEM 228 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E~~~ 228 (405)
+|+||||||.... .+...+++|+.|+.++.+++... +.++||++||.... .....|+.+|...|.+.
T Consensus 336 ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la 415 (511)
T 2z5l_A 336 PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALA 415 (511)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHH
T ss_pred CcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 9999999997542 12346789999999999999877 78899999998654 34578999999999998
Q ss_pred HHHhhhcCCceEEEEecCCcc
Q 043385 229 MKVAEEDSGFTYSIVRPTAFF 249 (405)
Q Consensus 229 ~~~~~~~~gi~~~ilRp~~v~ 249 (405)
+.+.. .|+++++|+||.+.
T Consensus 416 ~~~~~--~gi~v~sv~pG~~~ 434 (511)
T 2z5l_A 416 ERRRA--AGLPATSVAWGLWG 434 (511)
T ss_dssp HHHHT--TTCCCEEEEECCBC
T ss_pred HHHHH--cCCcEEEEECCccc
Confidence 87654 79999999999883
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.79 E-value=9.7e-19 Score=172.88 Aligned_cols=167 Identities=16% Similarity=0.151 Sum_probs=132.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.++++++|||||+|+||.+++++|+++|++|++++|+..... ....... .++.++.+|++|.++++++++.+.
T Consensus 210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~----l~~~~~~-~~~~~~~~Dvtd~~~v~~~~~~~~~~ 284 (454)
T 3u0b_A 210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAED----LKRVADK-VGGTALTLDVTADDAVDKITAHVTEH 284 (454)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH----HHHHHHH-HTCEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHH----HHHHHHH-cCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999998753210 0011122 267899999999999998887552
Q ss_pred -C-CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc----CCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 -T-SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC----GASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 -~-~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~----~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+ ++|+||||||.... .++..+++|+.|+.++.+++... +.++||++||...+ .....|+.+|
T Consensus 285 ~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasK 364 (454)
T 3u0b_A 285 HGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTK 364 (454)
T ss_dssp STTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred cCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHH
Confidence 3 49999999997642 23357889999999999998765 56799999998765 4567899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
...+.+.+.++.+ ..|+++++|.||++..++.
T Consensus 365 aal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 398 (454)
T 3u0b_A 365 AGMIGLAEALAPVLADKGITINAVAPGFIETKMT 398 (454)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECSBCC---
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhh
Confidence 9999988888765 5799999999999988753
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=8.2e-19 Score=165.90 Aligned_cols=165 Identities=15% Similarity=0.120 Sum_probs=122.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc------CCCCchhHhhhccCCcEEEEcCCCCHHHHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI------RGRNDKEETLNQLQGASVCFSDVTNLESLEKSL 155 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~------~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~ 155 (405)
.+++|+||||||+|+||++++++|+++|++|++++|..... .........+... +. .+.+|+.|.+++++++
T Consensus 6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~-~~-~~~~D~~~~~~~~~~~ 83 (319)
T 1gz6_A 6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-GG-KAVANYDSVEAGEKLV 83 (319)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-TC-EEEEECCCGGGHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh-CC-eEEEeCCCHHHHHHHH
Confidence 45678999999999999999999999999999987643210 0000001112221 22 2358999998877776
Q ss_pred Hhh---CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc---CCChh
Q 043385 156 ENL---GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ---KPLLE 216 (405)
Q Consensus 156 ~~~---~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~---~~~~~ 216 (405)
+.+ .+++|+||||||.... +++..+++|+.|+.++++++ ++.+.++||++||.... .+...
T Consensus 84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~ 163 (319)
T 1gz6_A 84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQAN 163 (319)
T ss_dssp HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHH
Confidence 543 2579999999997532 23347889999977777665 55677899999997553 35678
Q ss_pred HHHHHHHHHHHHHHHhhh--cCCceEEEEecCCc
Q 043385 217 FQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAF 248 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v 248 (405)
|+.+|.+.+.+.+.++.+ ..|+++++|+||.+
T Consensus 164 Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 164 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 999999999999988775 46999999999987
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=6e-19 Score=175.96 Aligned_cols=166 Identities=20% Similarity=0.248 Sum_probs=131.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++||||||+|+||.+++++|+++|++ |++++|+.............+.. ..++.++.+|++|++++.++++.+.
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~ 304 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 304 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 4689999999999999999999999985 99999987532211111122222 2367899999999999999998752
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---CCChhHHHHHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKLKFEAE 227 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E~~ 227 (405)
+++|+||||||.... .+...+++|+.|+.++++++++.+.++||++||...+ .....|+.+|...+.+
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~l 384 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL 384 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHH
T ss_pred CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHHHHHHHH
Confidence 457999999997542 1234678899999999999999889999999998654 3457899999999988
Q ss_pred HHHHhhhcCCceEEEEecCCcccC
Q 043385 228 MMKVAEEDSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 228 ~~~~~~~~~gi~~~ilRp~~v~g~ 251 (405)
...+.. .|+++++|+||.++++
T Consensus 385 a~~~~~--~gi~v~~i~pG~~~~~ 406 (486)
T 2fr1_A 385 AQQRRS--DGLPATAVAWGTWAGS 406 (486)
T ss_dssp HHHHHH--TTCCCEEEEECCBC--
T ss_pred HHHHHh--cCCeEEEEECCeeCCC
Confidence 877664 7999999999999875
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=171.95 Aligned_cols=166 Identities=19% Similarity=0.187 Sum_probs=133.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG--T 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~--~ 160 (405)
+++||||||+|+||.++++.|+++|+ .|+++.|+.............+.. ..++.++.+|++|.+++.++++.+. +
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 47999999999999999999999998 788888875433222222222222 2368899999999999999998753 4
Q ss_pred CccEEEEccccc-CC---------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---CCChhHHHHHHHHHHH
Q 043385 161 SIDVVVSCLASR-SG---------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKLKFEAE 227 (405)
Q Consensus 161 ~~d~Vv~~a~~~-~~---------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E~~ 227 (405)
++|+||||||.. .. .+...+++|+.|+.++.+++...+.++||++||.... .....|+.+|...+.+
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldal 398 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYLDAL 398 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHHHHHHH
Confidence 699999999976 22 1234788999999999999999888999999998765 3457899999999998
Q ss_pred HHHHhhhcCCceEEEEecCCcccCc
Q 043385 228 MMKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 228 ~~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.. .|+++++|.||.+.++.
T Consensus 399 a~~~~~--~Gi~v~sV~pG~w~~~g 421 (496)
T 3mje_A 399 AEHRRS--LGLTASSVAWGTWGEVG 421 (496)
T ss_dssp HHHHHH--TTCCCEEEEECEESSSC
T ss_pred HHHHHh--cCCeEEEEECCcccCCc
Confidence 887765 89999999999887653
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=167.75 Aligned_cols=164 Identities=15% Similarity=0.090 Sum_probs=126.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEE-ecCCCC----------cCCCCchhHhhhc-cCCcEEEEcCCCCHHH
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFN-VIAI-AREKSG----------IRGRNDKEETLNQ-LQGASVCFSDVTNLES 150 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l-~r~~~~----------~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~ 150 (405)
.++++|||||+|+||.+++++|+++|++ |+++ +|+... ..........+.. ..++.++.+|++|.++
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 4689999999999999999999999987 5555 787532 1111111222222 2368899999999999
Q ss_pred HHHHHHhhC--CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcC-----CCEEEEEccccccC--
Q 043385 151 LEKSLENLG--TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCG-----ASHFVLLSAICVQK-- 212 (405)
Q Consensus 151 l~~~~~~~~--~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~-----v~~~V~~Ss~~~~~-- 212 (405)
+.++++.+. +++|+||||||.... .+...+++|+.|+.++.+++.... .++||++||+....
T Consensus 330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~ 409 (525)
T 3qp9_A 330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG 409 (525)
T ss_dssp HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence 999998753 578999999997542 233478899999999999988765 78999999988763
Q ss_pred -CChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcc
Q 043385 213 -PLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFF 249 (405)
Q Consensus 213 -~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~ 249 (405)
....|+.+|...+.+...+. ..|+++++|.||.+-
T Consensus 410 ~g~~~YaaaKa~l~~lA~~~~--~~gi~v~sI~pG~~~ 445 (525)
T 3qp9_A 410 AGQGAYAAGTAFLDALAGQHR--ADGPTVTSVAWSPWE 445 (525)
T ss_dssp TTCHHHHHHHHHHHHHHTSCC--SSCCEEEEEEECCBT
T ss_pred CCCHHHHHHHHHHHHHHHHHH--hCCCCEEEEECCccc
Confidence 45789999999998876555 379999999999983
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3e-17 Score=153.66 Aligned_cols=167 Identities=16% Similarity=0.116 Sum_probs=119.4
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCC-----------CCcCCCCchhHhhhccC--C-cEEEEcC-
Q 043385 82 NPKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREK-----------SGIRGRNDKEETLNQLQ--G-ASVCFSD- 144 (405)
Q Consensus 82 ~~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~-----------~~~~~~~~~~~~~~~~~--~-v~~~~~D- 144 (405)
++++|++|||||+ |+||++++++|+++|++|++++|++ ++.... ..+.... . ...+.+|
T Consensus 5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 80 (297)
T 1d7o_A 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS----RVLPDGSLMEIKKVYPLDA 80 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG----GBCTTSSBCCEEEEEEECT
T ss_pred ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh----hhhccccccccccccccce
Confidence 4677899999999 9999999999999999999998642 222110 1111000 0 2333333
Q ss_pred -------CC----C--------HHHHHHHHHhhC---CCccEEEEcccccC---C--------CCcchhHhHHHHHHHHH
Q 043385 145 -------VT----N--------LESLEKSLENLG---TSIDVVVSCLASRS---G--------GVKDSWKIDYEANRNSL 191 (405)
Q Consensus 145 -------l~----d--------~~~l~~~~~~~~---~~~d~Vv~~a~~~~---~--------~~~~~~~~n~~g~~~ll 191 (405)
+. | +++++++++.+. +++|+||||||... . ++...+++|+.++.+++
T Consensus 81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 160 (297)
T 1d7o_A 81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL 160 (297)
T ss_dssp TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence 22 2 445555555331 46999999998531 1 23447889999999999
Q ss_pred HHHHhc--CCCEEEEEccccccC--C-C-hhHHHHHHHHHHHHHHHhhh---cCCceEEEEecCCcccCc
Q 043385 192 VAGRNC--GASHFVLLSAICVQK--P-L-LEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 192 ~aa~~~--~v~~~V~~Ss~~~~~--~-~-~~y~~sK~~~E~~~~~~~~~---~~gi~~~ilRp~~v~g~~ 252 (405)
+++... .-++||++||...+. | . ..|+.+|.+.+.+.+.++.+ ..|+++++|+||++.++.
T Consensus 161 ~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~ 230 (297)
T 1d7o_A 161 SHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA 230 (297)
T ss_dssp HHHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred HHHHHHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccch
Confidence 998754 126999999987763 2 3 47999999999999998876 269999999999999875
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-17 Score=169.45 Aligned_cols=162 Identities=14% Similarity=0.115 Sum_probs=116.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC---------CCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE---------KSGIRGRNDKEETLNQLQGASVCFSDVTNLESLE 152 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~---------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~ 152 (405)
.+++++||||||+|+||++++++|+++|++|++++|. .+... ...+.+... +.. +.+|+.|.++++
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~---~~~~~i~~~-~~~-~~~D~~d~~~~~ 90 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAAD---IVVDEIRKA-GGE-AVADYNSVIDGA 90 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHH---HHHHHHHHT-TCC-EEECCCCGGGHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHH---HHHHHHHHh-CCe-EEEEeCCHHHHH
Confidence 5678999999999999999999999999999999883 22211 111122221 222 347999999888
Q ss_pred HHHHhhC---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc---CC
Q 043385 153 KSLENLG---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ---KP 213 (405)
Q Consensus 153 ~~~~~~~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~---~~ 213 (405)
++++.+. +++|+||||||.... ++...+++|+.|+.++++++ ++.+.++||++||.... ..
T Consensus 91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~ 170 (613)
T 3oml_A 91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG 170 (613)
T ss_dssp HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTT
T ss_pred HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence 8877543 579999999997532 23457889999988877776 56667899999998765 34
Q ss_pred ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCc
Q 043385 214 LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAF 248 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v 248 (405)
...|+.+|.+.+.+.+.++.| ..|+++++|.||.+
T Consensus 171 ~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 171 QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA 207 (613)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence 578999999999999988875 56999999999965
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=8.1e-17 Score=152.09 Aligned_cols=171 Identities=18% Similarity=0.129 Sum_probs=119.8
Q ss_pred CCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCCC-------CcCCCCchhHhhhccC---CcEEEEcCC----
Q 043385 82 NPKDINILVVGS--TGYIGKFVVEELVSRGFNVIAIAREKS-------GIRGRNDKEETLNQLQ---GASVCFSDV---- 145 (405)
Q Consensus 82 ~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~l~r~~~-------~~~~~~~~~~~~~~~~---~v~~~~~Dl---- 145 (405)
+++++++||||| +|+||++++++|+++|++|++++|++. ...........+.... .+.++.+|+
T Consensus 6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 85 (315)
T 2o2s_A 6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDK 85 (315)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSS
T ss_pred cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccc
Confidence 467889999999 899999999999999999999987531 0000000001111000 134555443
Q ss_pred --------C--------CHHHHHHHHHhhC---CCccEEEEcccccC---C--------CCcchhHhHHHHHHHHHHHHH
Q 043385 146 --------T--------NLESLEKSLENLG---TSIDVVVSCLASRS---G--------GVKDSWKIDYEANRNSLVAGR 195 (405)
Q Consensus 146 --------~--------d~~~l~~~~~~~~---~~~d~Vv~~a~~~~---~--------~~~~~~~~n~~g~~~ll~aa~ 195 (405)
+ |+++++++++.+. +++|+||||||... . ++...+++|+.++.++++++.
T Consensus 86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 165 (315)
T 2o2s_A 86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG 165 (315)
T ss_dssp TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence 2 2445666555331 57999999998542 1 233467899999999999886
Q ss_pred hc--CCCEEEEEccccccC--C-C-hhHHHHHHHHHHHHHHHhhh--c-CCceEEEEecCCcccCc
Q 043385 196 NC--GASHFVLLSAICVQK--P-L-LEFQRAKLKFEAEMMKVAEE--D-SGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 196 ~~--~v~~~V~~Ss~~~~~--~-~-~~y~~sK~~~E~~~~~~~~~--~-~gi~~~ilRp~~v~g~~ 252 (405)
.. .-++||++||...+. + . ..|+.+|.+.+.+.+.++.+ . .|+++++|+||+|..+.
T Consensus 166 ~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~ 231 (315)
T 2o2s_A 166 PIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRA 231 (315)
T ss_dssp TTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHH
T ss_pred HHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchh
Confidence 53 126999999988763 2 2 47999999999999988876 2 79999999999998764
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.2e-18 Score=163.62 Aligned_cols=159 Identities=10% Similarity=0.123 Sum_probs=120.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecCCC--CcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-------NVIAIAREKS--GIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSL 155 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~l~r~~~--~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~ 155 (405)
+|+|+||||+||||++++..|+++|+ +|+++++.+. +... ....+.. ..+.++ +|+.+.+.+.+++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g---~~~dl~~-~~~~~~-~di~~~~~~~~a~ 78 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEG---VVMELED-CAFPLL-AGLEATDDPKVAF 78 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHH---HHHHHHT-TTCTTE-EEEEEESCHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccc---hhhhhhc-cccccc-CCeEeccChHHHh
Confidence 46899999999999999999999986 8999998642 1100 0011211 112333 6887767788888
Q ss_pred HhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcC-CC-EEEEEcccc------------ccCCChhHH
Q 043385 156 ENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCG-AS-HFVLLSAIC------------VQKPLLEFQ 218 (405)
Q Consensus 156 ~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~-v~-~~V~~Ss~~------------~~~~~~~y~ 218 (405)
++ +|+|||+||.... ...+.++.|+.+++++++++++.+ .+ ++|++|+.. .+.|...|+
T Consensus 79 ~~----~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg 154 (327)
T 1y7t_A 79 KD----ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTA 154 (327)
T ss_dssp TT----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEE
T ss_pred CC----CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheec
Confidence 87 9999999997532 334588999999999999999986 65 788877653 123556799
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch
Q 043385 219 RAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~ 253 (405)
.+|...|++...++. ..|++++++||.+||||..
T Consensus 155 ~tkl~~er~~~~~a~-~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 155 MTRLDHNRAKAQLAK-KTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp CCHHHHHHHHHHHHH-HHTCCGGGEECCEEEBCSS
T ss_pred cchHHHHHHHHHHHH-HhCcChhheeeeEEEcCCC
Confidence 999999998888775 5799999999999999864
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.1e-16 Score=148.85 Aligned_cols=170 Identities=14% Similarity=0.096 Sum_probs=124.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCcCCCC--------ch-hHhhh-ccCCcEEEEcCCCCHHHH
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVS-RGFNVIAIAREKSGIRGRN--------DK-EETLN-QLQGASVCFSDVTNLESL 151 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~--------~~-~~~~~-~~~~v~~~~~Dl~d~~~l 151 (405)
..+|++|||||+++||+++++.|++ +|++|++++|+.+...... .. .+... ....+..+.+|++|++++
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v 124 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK 124 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 4578999999999999999999999 9999999998766542110 00 11111 123578899999999999
Q ss_pred HHHHHhhC---CCccEEEEcccccC--------------C-----------------------------CCcchhHhHHH
Q 043385 152 EKSLENLG---TSIDVVVSCLASRS--------------G-----------------------------GVKDSWKIDYE 185 (405)
Q Consensus 152 ~~~~~~~~---~~~d~Vv~~a~~~~--------------~-----------------------------~~~~~~~~n~~ 185 (405)
+++++.+. +++|++|||||... . +++..+++|..
T Consensus 125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~ 204 (405)
T 3zu3_A 125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG 204 (405)
T ss_dssp HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence 88887652 78999999998630 0 11224456665
Q ss_pred HHH-HHHHHHHhcC----CCEEEEEccccccC---CC--hhHHHHHHHHHHHHHHHhhh--cC-CceEEEEecCCcccCc
Q 043385 186 ANR-NSLVAGRNCG----ASHFVLLSAICVQK---PL--LEFQRAKLKFEAEMMKVAEE--DS-GFTYSIVRPTAFFKSL 252 (405)
Q Consensus 186 g~~-~ll~aa~~~~----v~~~V~~Ss~~~~~---~~--~~y~~sK~~~E~~~~~~~~~--~~-gi~~~ilRp~~v~g~~ 252 (405)
+.. .+++++.... -+++|++||.+... .. ..|+.+|.+++.+.+.++.| .. |++++++.||.+-.+.
T Consensus 205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~ 284 (405)
T 3zu3_A 205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQA 284 (405)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCch
Confidence 554 4555543322 25899999998752 23 68999999999999998876 57 9999999999987753
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=4.5e-17 Score=154.75 Aligned_cols=168 Identities=15% Similarity=0.037 Sum_probs=123.8
Q ss_pred CCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCC---------CCcCCCCchhHh-hhccCCcEEEEcCCCCH--H-
Q 043385 85 DINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREK---------SGIRGRNDKEET-LNQLQGASVCFSDVTNL--E- 149 (405)
Q Consensus 85 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~---------~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~--~- 149 (405)
+++++||||++ +||.+++++|+++|++|++.+|++ ++.......... ......+.++.+|+.+. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 57899999875 999999999999999999776553 222211111110 11112467888898877 6
Q ss_pred -----------------HHHHHHHhhC---CCccEEEEcccccC---C--------CCcchhHhHHHHHHHHHHHHHhcC
Q 043385 150 -----------------SLEKSLENLG---TSIDVVVSCLASRS---G--------GVKDSWKIDYEANRNSLVAGRNCG 198 (405)
Q Consensus 150 -----------------~l~~~~~~~~---~~~d~Vv~~a~~~~---~--------~~~~~~~~n~~g~~~ll~aa~~~~ 198 (405)
++.++++.+. +++|+||||||... . .+...+++|+.++..+.+++...-
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 7777766542 57999999999631 1 234578999999999988876531
Q ss_pred --CCEEEEEccccccC---CCh-hHHHHHHHHHHHHHHHhhh--c-CCceEEEEecCCcccCc
Q 043385 199 --ASHFVLLSAICVQK---PLL-EFQRAKLKFEAEMMKVAEE--D-SGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 199 --v~~~V~~Ss~~~~~---~~~-~y~~sK~~~E~~~~~~~~~--~-~gi~~~ilRp~~v~g~~ 252 (405)
-++||++||...+. ... .|+.+|++.+.+.+.++.+ . .|+++++|.||+|..++
T Consensus 162 ~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~ 224 (329)
T 3lt0_A 162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 224 (329)
T ss_dssp EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
T ss_pred hhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechh
Confidence 15899999988763 233 8999999999999988876 4 69999999999998764
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.6e-16 Score=149.25 Aligned_cols=170 Identities=15% Similarity=0.113 Sum_probs=123.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCcCCCC--------c-hhHhhh-ccCCcEEEEcCCCCHHHHH
Q 043385 84 KDINILVVGSTGYIGKFVVEELVS-RGFNVIAIAREKSGIRGRN--------D-KEETLN-QLQGASVCFSDVTNLESLE 152 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~--------~-~~~~~~-~~~~v~~~~~Dl~d~~~l~ 152 (405)
.+|++|||||+++||+++++.|++ +|++|++++|+.+...... . ..+... ....+..+.+|++|+++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 478999999999999999999999 9999999999876543211 0 001111 1235788999999999988
Q ss_pred HHHHhh---C-CCccEEEEccccc-------------C-CC-----------------------------CcchhHhHHH
Q 043385 153 KSLENL---G-TSIDVVVSCLASR-------------S-GG-----------------------------VKDSWKIDYE 185 (405)
Q Consensus 153 ~~~~~~---~-~~~d~Vv~~a~~~-------------~-~~-----------------------------~~~~~~~n~~ 185 (405)
++++.+ . +++|+||||||.. . .. ++..+++|..
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~ 219 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG 219 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence 877654 3 6899999999862 0 01 1113344444
Q ss_pred HHH-HHHHHHHhcC----CCEEEEEccccccCCC-----hhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 186 ANR-NSLVAGRNCG----ASHFVLLSAICVQKPL-----LEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 186 g~~-~ll~aa~~~~----v~~~V~~Ss~~~~~~~-----~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
+.. .+++++...+ -++||++||.+...+. ..|+.+|.+++.+.+.++.| ..|+++++|.||.+-.+..
T Consensus 220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~ 299 (422)
T 3s8m_A 220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS 299 (422)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence 433 5555554332 2589999999876432 57899999999999998876 6799999999999987653
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-16 Score=151.26 Aligned_cols=171 Identities=15% Similarity=0.074 Sum_probs=105.7
Q ss_pred CCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEecCC-----------CCcCCCC--------chhHhhhccC----
Q 043385 82 NPKDINILVVGS--TGYIGKFVVEELVSRGFNVIAIAREK-----------SGIRGRN--------DKEETLNQLQ---- 136 (405)
Q Consensus 82 ~~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~l~r~~-----------~~~~~~~--------~~~~~~~~~~---- 136 (405)
.++++++||||| +|+||++++++|+++|++|++++|++ ++..... ...+.+....
T Consensus 6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (319)
T 2ptg_A 6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV 85 (319)
T ss_dssp CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence 456789999999 89999999999999999999998752 1111000 0000111100
Q ss_pred CcEEEEcCC------------CC--------HHHHHHHHHhhC---CCccEEEEcccccC---C--------CCcchhHh
Q 043385 137 GASVCFSDV------------TN--------LESLEKSLENLG---TSIDVVVSCLASRS---G--------GVKDSWKI 182 (405)
Q Consensus 137 ~v~~~~~Dl------------~d--------~~~l~~~~~~~~---~~~d~Vv~~a~~~~---~--------~~~~~~~~ 182 (405)
...++.+|+ +| +++++++++.+. +++|+||||||... . .+...+++
T Consensus 86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v 165 (319)
T 2ptg_A 86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS 165 (319)
T ss_dssp CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence 134555543 22 235555555331 57999999998542 1 23347789
Q ss_pred HHHHHHHHHHHHHhc--CCCEEEEEccccccCC---C-hhHHHHHHHHHHHHHHHhhh--c-CCceEEEEecCCcccCc
Q 043385 183 DYEANRNSLVAGRNC--GASHFVLLSAICVQKP---L-LEFQRAKLKFEAEMMKVAEE--D-SGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 183 n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~~---~-~~y~~sK~~~E~~~~~~~~~--~-~gi~~~ilRp~~v~g~~ 252 (405)
|+.++.++++++... .-++||++||...+.+ . ..|+.+|.+.+.+.+.++.+ . .|+++++|+||+|..+.
T Consensus 166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~ 244 (319)
T 2ptg_A 166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA 244 (319)
T ss_dssp HTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred hhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence 999999999988754 1269999999887632 2 47999999999999988876 2 69999999999998775
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.63 E-value=8e-16 Score=157.15 Aligned_cols=160 Identities=14% Similarity=0.117 Sum_probs=116.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc-CCcEEEEcCC-CCHHHH-HHHHHhh
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL-QGASVCFSDV-TNLESL-EKSLENL 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl-~d~~~l-~~~~~~~ 158 (405)
.+++++++||||+++||++++++|+++|++|++.+|... . ...+.+... ..+..+.+|+ .+.+.+ +++.+.+
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~--~---~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDA--T---KTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKY 393 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--H---HHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccH--H---HHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhc
Confidence 467889999999999999999999999999999887321 1 111222221 2355666787 554443 2233322
Q ss_pred CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 159 GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|++|||||.... +++..+++|+.|+.++.++ +++.+-++||++||..... ....|+.+|.
T Consensus 394 -G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKa 472 (604)
T 2et6_A 394 -GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKA 472 (604)
T ss_dssp -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHH
Confidence 579999999997431 2445789999996665554 4555567999999987653 3468999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCC
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTA 247 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~ 247 (405)
.+..+.+.++.| ..|+++++|.||.
T Consensus 473 al~~lt~~la~El~~~gIrVn~v~PG~ 499 (604)
T 2et6_A 473 GILGLSKTMAIEGAKNNIKVNIVAPHA 499 (604)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred HHHHHHHHHHHHhCccCeEEEEEcCCC
Confidence 999999988876 5799999999994
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.6e-15 Score=145.69 Aligned_cols=170 Identities=15% Similarity=0.060 Sum_probs=122.6
Q ss_pred CCCCeEEEEcCCChhHHH--HHHHHHhCCCeEEEEecCCCCcCCCC--------chhH-hhh-ccCCcEEEEcCCCCHHH
Q 043385 83 PKDINILVVGSTGYIGKF--VVEELVSRGFNVIAIAREKSGIRGRN--------DKEE-TLN-QLQGASVCFSDVTNLES 150 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~--l~~~L~~~g~~V~~l~r~~~~~~~~~--------~~~~-~~~-~~~~v~~~~~Dl~d~~~ 150 (405)
..+|++|||||+++||.+ +++.|+++|++|++++|+........ .... ... ....+..+.+|++|+++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~ 137 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET 137 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence 467899999999999999 99999999999999999865532110 1111 111 12357889999999999
Q ss_pred HHHHHHhhC---CCccEEEEccccc-------------C-CC-----------------------------CcchhHhHH
Q 043385 151 LEKSLENLG---TSIDVVVSCLASR-------------S-GG-----------------------------VKDSWKIDY 184 (405)
Q Consensus 151 l~~~~~~~~---~~~d~Vv~~a~~~-------------~-~~-----------------------------~~~~~~~n~ 184 (405)
++++++.+. +++|++|||||.. . .. +...+++|.
T Consensus 138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~ 217 (418)
T 4eue_A 138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG 217 (418)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence 988887653 6899999999863 0 00 111233333
Q ss_pred HHHH-HHHHHHHhcC----CCEEEEEccccccC---CC--hhHHHHHHHHHHHHHHHhhh--c-CCceEEEEecCCcccC
Q 043385 185 EANR-NSLVAGRNCG----ASHFVLLSAICVQK---PL--LEFQRAKLKFEAEMMKVAEE--D-SGFTYSIVRPTAFFKS 251 (405)
Q Consensus 185 ~g~~-~ll~aa~~~~----v~~~V~~Ss~~~~~---~~--~~y~~sK~~~E~~~~~~~~~--~-~gi~~~ilRp~~v~g~ 251 (405)
.+.. .++.++...+ -.++|++||.+... .. ..|+.+|.+.+.+.+.++.| . .|++++++.||.+-.+
T Consensus 218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~ 297 (418)
T 4eue_A 218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK 297 (418)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence 3332 4455554433 24899999988753 23 67999999999999999887 5 6999999999999875
Q ss_pred c
Q 043385 252 L 252 (405)
Q Consensus 252 ~ 252 (405)
.
T Consensus 298 ~ 298 (418)
T 4eue_A 298 A 298 (418)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.8e-15 Score=154.48 Aligned_cols=164 Identities=15% Similarity=0.101 Sum_probs=115.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc------CCCCchhHhhhccCCcEEEEcCCCCHHHHHHHH
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI------RGRNDKEETLNQLQGASVCFSDVTNLESLEKSL 155 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~------~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~ 155 (405)
.+++++++||||+++||++++++|+++|++|++.+|+.... .......+.+... +.+. .+|+.|.+++++++
T Consensus 5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~-g~~~-~~d~~d~~~~~~~v 82 (604)
T 2et6_A 5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN-GGVA-VADYNNVLDGDKIV 82 (604)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT-TCEE-EEECCCTTCHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc-CCeE-EEEcCCHHHHHHHH
Confidence 35678999999999999999999999999999998865110 0000111122221 2232 35777765554444
Q ss_pred Hhh---CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEcccccc---CCChh
Q 043385 156 ENL---GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQ---KPLLE 216 (405)
Q Consensus 156 ~~~---~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~---~~~~~ 216 (405)
+.+ .+++|++|||||.... +++..+++|+.|+.++.+ .+++.+-++||++||.... .....
T Consensus 83 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~ 162 (604)
T 2et6_A 83 ETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQAN 162 (604)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchH
Confidence 432 1679999999997431 244578999999665555 4555566799999998764 34568
Q ss_pred HHHHHHHHHHHHHHHhhh--cCCceEEEEecCC
Q 043385 217 FQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTA 247 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~ 247 (405)
|+.+|.+++.+.+.++.| .+|+++++|.|+.
T Consensus 163 Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~ 195 (604)
T 2et6_A 163 YASAKSALLGFAETLAKEGAKYNIKANAIAPLA 195 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC
Confidence 999999999999998876 6799999999973
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=7.3e-15 Score=162.38 Aligned_cols=169 Identities=14% Similarity=0.046 Sum_probs=125.3
Q ss_pred CCCCCeEEEEcCCCh-hHHHHHHHHHhCCCeEEEEe-cCCCCcCCCCchh-Hhhhc-cCCcEEEEcCCCCHHHHHHHHHh
Q 043385 82 NPKDINILVVGSTGY-IGKFVVEELVSRGFNVIAIA-REKSGIRGRNDKE-ETLNQ-LQGASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 82 ~~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~-~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
.+++++||||||+|+ ||.++++.|+++|++|++++ |+.++.......+ ..... ..++.++.+|++|.++++++++.
T Consensus 672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~ 751 (1887)
T 2uv8_A 672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 751 (1887)
T ss_dssp CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence 467899999999998 99999999999999999984 5544321111111 11111 23578899999999999998875
Q ss_pred hC--------C-CccEEEEcccccCCC------------CcchhHhHHHHHHHHHHHHHhcC------CCEEEEEccccc
Q 043385 158 LG--------T-SIDVVVSCLASRSGG------------VKDSWKIDYEANRNSLVAGRNCG------ASHFVLLSAICV 210 (405)
Q Consensus 158 ~~--------~-~~d~Vv~~a~~~~~~------------~~~~~~~n~~g~~~ll~aa~~~~------v~~~V~~Ss~~~ 210 (405)
+. + ++|+||||||..... +...+++|+.++.+++++++... -++||++||...
T Consensus 752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag 831 (1887)
T 2uv8_A 752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 831 (1887)
T ss_dssp HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence 41 2 699999999975322 23467899999999988874322 258999999887
Q ss_pred cC-CChhHHHHHHHHHHH-HHHHhhh-cCCceEEEEecCCccc
Q 043385 211 QK-PLLEFQRAKLKFEAE-MMKVAEE-DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 211 ~~-~~~~y~~sK~~~E~~-~~~~~~~-~~gi~~~ilRp~~v~g 250 (405)
.. ....|+.+|+..+.+ .+.++.+ ...+++++|.||++.+
T Consensus 832 ~~gg~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 832 TFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp CSSCBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 64 356899999999998 5555543 1229999999999984
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.3e-15 Score=161.38 Aligned_cols=169 Identities=14% Similarity=0.053 Sum_probs=123.7
Q ss_pred CCCCCeEEEEcCCCh-hHHHHHHHHHhCCCeEEEE-ecCCCCcCCCCchh-Hhhhc-cCCcEEEEcCCCCHHHHHHHHHh
Q 043385 82 NPKDINILVVGSTGY-IGKFVVEELVSRGFNVIAI-AREKSGIRGRNDKE-ETLNQ-LQGASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 82 ~~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~l-~r~~~~~~~~~~~~-~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
.+++++||||||+|+ ||++++++|+++|++|+++ .|+.++.......+ ..... ..++.++.+|++|.++++++++.
T Consensus 473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~ 552 (1688)
T 2pff_A 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 552 (1688)
T ss_dssp CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 467789999999998 9999999999999999998 46555432211111 00110 12578899999999999998875
Q ss_pred hC--------C-CccEEEEcccccCCC------------CcchhHhHHHHHHHHHHHHHhc------CCCEEEEEccccc
Q 043385 158 LG--------T-SIDVVVSCLASRSGG------------VKDSWKIDYEANRNSLVAGRNC------GASHFVLLSAICV 210 (405)
Q Consensus 158 ~~--------~-~~d~Vv~~a~~~~~~------------~~~~~~~n~~g~~~ll~aa~~~------~v~~~V~~Ss~~~ 210 (405)
+. + ++|+||||||..... +...+++|+.++.+++++++.. +-++||++||..+
T Consensus 553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG 632 (1688)
T 2pff_A 553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 632 (1688)
T ss_dssp HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence 42 2 699999999964321 2346789999999888877321 2258999999877
Q ss_pred cC-CChhHHHHHHHHHHHH-HHHhhh-cCCceEEEEecCCccc
Q 043385 211 QK-PLLEFQRAKLKFEAEM-MKVAEE-DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 211 ~~-~~~~y~~sK~~~E~~~-~~~~~~-~~gi~~~ilRp~~v~g 250 (405)
.. ....|+.+|++.+.++ +.++.+ ...++++.|.||++.+
T Consensus 633 ~~Gg~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 633 TFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp TSSCBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 64 4568999999999984 433332 1239999999999984
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.58 E-value=6.3e-15 Score=154.98 Aligned_cols=165 Identities=20% Similarity=0.225 Sum_probs=129.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHH-hCCC-eEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 84 KDINILVVGSTGYIGKFVVEELV-SRGF-NVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~-~~g~-~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.++++|||||+|+||++++++|+ ++|+ +|++++|+...........+.+.. ..++.++.+|++|.++++++++.+.
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 7898 599999985443322222233322 2368889999999999999998763
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---CCChhHHHHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKLKFEA 226 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E~ 226 (405)
.++|+||||||.... .++..+++|+.|+.++.+++.. .. +||++||.... .....|+.+|...+.
T Consensus 609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~g~~~YaAaka~~~a 686 (795)
T 3slk_A 609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSGGQGNYAAANSFLDA 686 (795)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCSSCHHHHHHHHHHHH
T ss_pred hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCCCCHHHHHHHHHHHH
Confidence 369999999997542 2345778999999999998743 34 89999998775 456789999998888
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCc
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~ 252 (405)
+.+++.. .|++++.|.||.+-.+.
T Consensus 687 lA~~~~~--~Gi~v~sI~pG~v~t~g 710 (795)
T 3slk_A 687 LAQQRQS--RGLPTRSLAWGPWAEHG 710 (795)
T ss_dssp HHHHHHH--TTCCEEEEEECCCSCCC
T ss_pred HHHHHHH--cCCeEEEEECCeECcch
Confidence 7777765 89999999999987654
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=9.6e-15 Score=161.09 Aligned_cols=171 Identities=16% Similarity=0.044 Sum_probs=125.0
Q ss_pred CCCCCeEEEEcCCCh-hHHHHHHHHHhCCCeEEEEe-cCCCCcCCCCchh-Hhhhc-cCCcEEEEcCCCCHHHHHHHHHh
Q 043385 82 NPKDINILVVGSTGY-IGKFVVEELVSRGFNVIAIA-REKSGIRGRNDKE-ETLNQ-LQGASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 82 ~~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~l~-r~~~~~~~~~~~~-~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
.+++++||||||+|+ ||.+++++|+++|++|++++ |+.+........+ ..+.. ..++.++.+|++|.+++.++++.
T Consensus 649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 567899999999999 99999999999999999986 4443221110111 11111 23578899999999999998876
Q ss_pred hC------C-CccEEEEcccccCCC------------CcchhHhHHHHHHHHHHHHHh------cCCCEEEEEccccccC
Q 043385 158 LG------T-SIDVVVSCLASRSGG------------VKDSWKIDYEANRNSLVAGRN------CGASHFVLLSAICVQK 212 (405)
Q Consensus 158 ~~------~-~~d~Vv~~a~~~~~~------------~~~~~~~n~~g~~~ll~aa~~------~~v~~~V~~Ss~~~~~ 212 (405)
+. + ++|+||||||..... +...+++|+.++.+++.+++. .+.++||++||..+..
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF 808 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence 42 3 699999999965321 234678999998888776322 1235899999987764
Q ss_pred C-ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcc-cCc
Q 043385 213 P-LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFF-KSL 252 (405)
Q Consensus 213 ~-~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~-g~~ 252 (405)
+ ...|+.+|+..+.+++.+..+ ..+++++.|.||++- .++
T Consensus 809 gg~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m 852 (1878)
T 2uv9_A 809 GNDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGL 852 (1878)
T ss_dssp SCCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTS
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcc
Confidence 3 568999999999987765432 223999999999998 554
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.4e-12 Score=151.19 Aligned_cols=163 Identities=15% Similarity=0.108 Sum_probs=121.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++++||||+|+||+++++.|+++|++ |++++|+..+........+.+.. ..++.++.+|++|.++++++++.+.
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 5689999999999999999999999986 88888887653211111222222 2357788899999999988876542
Q ss_pred CCccEEEEcccccC---------CCCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc---CCChhHHHHHHHHH
Q 043385 160 TSIDVVVSCLASRS---------GGVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ---KPLLEFQRAKLKFE 225 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~---------~~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E 225 (405)
+++|+||||||... ..+...+++|+.|+.++.+++... ..++||++||.... .....|+.+|...+
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaal~ 2042 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAME 2042 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHHHH
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHHHH
Confidence 57999999999642 245668899999999998877653 34799999998765 34568999999999
Q ss_pred HHHHHHhhhcCCceEEEEecCCc
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAF 248 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v 248 (405)
.+.+.... .|++...+..|.+
T Consensus 2043 ~l~~~rr~--~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2043 RICEKRRH--DGLPGLAVQWGAI 2063 (2512)
T ss_dssp HHHHHHHH--TTSCCCEEEECCB
T ss_pred HHHHHHHH--CCCcEEEEEccCc
Confidence 99986664 6888888877654
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=8.1e-12 Score=144.85 Aligned_cols=169 Identities=15% Similarity=0.020 Sum_probs=118.8
Q ss_pred CCCCCeEEEEcCCCh-hHHHHHHHHHhCCCeEEEEecCCCCcCC--CCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHh
Q 043385 82 NPKDINILVVGSTGY-IGKFVVEELVSRGFNVIAIAREKSGIRG--RNDKEETLNQ-LQGASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 82 ~~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~l~r~~~~~~~--~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
.+++|++|||||+++ ||+++++.|+++|++|++++|+.+.... .......+.. ...+..+.+|++|+++++++++.
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 368899999999999 9999999999999999999998764100 0000111111 12467789999999999998876
Q ss_pred hC-------CCccEEEEcccc----cC----------CCCcch----hHhHHHHHHHHHHHH----HhcCCC---EE-EE
Q 043385 158 LG-------TSIDVVVSCLAS----RS----------GGVKDS----WKIDYEANRNSLVAG----RNCGAS---HF-VL 204 (405)
Q Consensus 158 ~~-------~~~d~Vv~~a~~----~~----------~~~~~~----~~~n~~g~~~ll~aa----~~~~v~---~~-V~ 204 (405)
+. +++|++|||||. .. .++... +++|+.++..++.++ ++.+.. .+ +.
T Consensus 2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D 2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence 53 479999999997 11 123333 677888876666554 333332 22 33
Q ss_pred Eccccc-cCCChhHHHHHHHHHHHHHHHhhh---cCCceEEEEecCCccc
Q 043385 205 LSAICV-QKPLLEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 205 ~Ss~~~-~~~~~~y~~sK~~~E~~~~~~~~~---~~gi~~~ilRp~~v~g 250 (405)
.|+... ......|+.+|.+++.+.+.++.| ..+++++.+.||++-+
T Consensus 2293 ~ss~~g~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~t 2342 (3089)
T 3zen_D 2293 GSPNRGMFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKG 2342 (3089)
T ss_dssp ECSSTTSCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEEC
T ss_pred CCcccccCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCC
Confidence 333222 223457999999999999999886 3569999999999873
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.31 E-value=5.2e-12 Score=100.61 Aligned_cols=96 Identities=26% Similarity=0.328 Sum_probs=78.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
++++|+|+|+ |++|+.+++.|.+.| ++|++++|++++. +.+. ..++.++.+|+.+.+.+.+++++ +
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~-------~~~~-~~~~~~~~~d~~~~~~~~~~~~~----~ 70 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAAL-------AVLN-RMGVATKQVDAKDEAGLAKALGG----F 70 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHH-------HHHH-TTTCEEEECCTTCHHHHHHHTTT----C
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHH-------HHHH-hCCCcEEEecCCCHHHHHHHHcC----C
Confidence 4578999999 999999999999999 9999999987643 2222 24788999999999999999887 9
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEE
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~ 205 (405)
|+|||+++.. ...++++++.+.|+++|...
T Consensus 71 d~vi~~~~~~-------------~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 71 DAVISAAPFF-------------LTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp SEEEECSCGG-------------GHHHHHHHHHHTTCEEECCC
T ss_pred CEEEECCCch-------------hhHHHHHHHHHhCCCEEEec
Confidence 9999998632 24678899999998766543
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.9e-09 Score=102.07 Aligned_cols=168 Identities=17% Similarity=0.091 Sum_probs=116.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHH-hCCCeEEEEecCCCCcCCCCc---------h-hHhhhccCCcEEEEcCCCCHHHH
Q 043385 83 PKDINILVVGSTGYIGKFVVEELV-SRGFNVIAIAREKSGIRGRND---------K-EETLNQLQGASVCFSDVTNLESL 151 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~l~r~~~~~~~~~~---------~-~~~~~~~~~v~~~~~Dl~d~~~l 151 (405)
..+|+||||||+.++|.+.+..|+ +.|..|+++.+..+....... . ............+.||+.|++.+
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i 127 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK 127 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence 457899999999999999999998 679999999987665432110 0 01112224678899999999999
Q ss_pred HHHHHhhC---CCccEEEEcccccCC-CC--------------------------c--------chhHhHHHHHHH----
Q 043385 152 EKSLENLG---TSIDVVVSCLASRSG-GV--------------------------K--------DSWKIDYEANRN---- 189 (405)
Q Consensus 152 ~~~~~~~~---~~~d~Vv~~a~~~~~-~~--------------------------~--------~~~~~n~~g~~~---- 189 (405)
+++++.+. +++|+|||++|.... ++ + ..-+.++.+|..
T Consensus 128 ~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~ 207 (401)
T 4ggo_A 128 AQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGG 207 (401)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhh
Confidence 98888763 789999999986421 00 0 001223344433
Q ss_pred -----HHHHHHhcCC----CEEEEEccccccCCC-----hhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCccc
Q 043385 190 -----SLVAGRNCGA----SHFVLLSAICVQKPL-----LEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFK 250 (405)
Q Consensus 190 -----ll~aa~~~~v----~~~V~~Ss~~~~~~~-----~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g 250 (405)
.+.+..+.++ .++|-+|+.+..... ..++.+|...|...+.++.+-.++++.++-++.+--
T Consensus 208 s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v~~a~vT 282 (401)
T 4ggo_A 208 EDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPSIRAFVSVNKGLVT 282 (401)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCCCCC
T ss_pred hHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcCcccc
Confidence 3344444442 479999988876322 257899999999999998875678888888876654
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1.1e-09 Score=103.41 Aligned_cols=113 Identities=14% Similarity=0.155 Sum_probs=83.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhcc-CCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQL-QGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
++|+|+||||+|++|..++..|+.+| ++|++++++++.. ....+... .... +.+ +.+.+++.+++++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~-----~~~dL~~~~~~~~-v~~-~~~t~d~~~al~g--- 76 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPG-----VTADISHMDTGAV-VRG-FLGQQQLEAALTG--- 76 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHH-----HHHHHHTSCSSCE-EEE-EESHHHHHHHHTT---
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHh-----HHHHhhcccccce-EEE-EeCCCCHHHHcCC---
Confidence 35799999999999999999999998 8899999876410 00112211 1111 222 3345678888998
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
+|+|||++|.... ...+....|+.+++++++++.+.+.+.+|+++|
T Consensus 77 -aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 77 -MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp -CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred -CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 9999999986532 235678999999999999999998888888875
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=99.02 E-value=4e-11 Score=113.38 Aligned_cols=115 Identities=11% Similarity=0.132 Sum_probs=82.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEecC----CCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHH
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-------NVIAIARE----KSGIRGRNDKEETLNQLQGASVCFSDVTNLESLE 152 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~l~r~----~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~ 152 (405)
++|||+||||+|+||++++..|+..|+ +|++++++ +++..+. ...+... ...+ ..|+....++.
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~---~~dl~~~-~~~~-~~~i~~~~~~~ 78 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGV---MMEIDDC-AFPL-LAGMTAHADPM 78 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHH---HHHHHTT-TCTT-EEEEEEESSHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhh---HHHHhhh-cccc-cCcEEEecCcH
Confidence 357999999999999999999999885 79999887 3222110 0112221 0111 24665556678
Q ss_pred HHHHhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcC-CC-EEEEEcc
Q 043385 153 KSLENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCG-AS-HFVLLSA 207 (405)
Q Consensus 153 ~~~~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~-v~-~~V~~Ss 207 (405)
+++++ +|+|||+||.... ...+.+..|+.+++++++++.+.+ .+ +||++|.
T Consensus 79 ~al~~----aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 79 TAFKD----ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp HHTTT----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred HHhCC----CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 88988 9999999996532 234577899999999999999984 66 8898885
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=3.8e-09 Score=86.85 Aligned_cols=102 Identities=15% Similarity=0.228 Sum_probs=74.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~ 161 (405)
.++++|+|+|+ |.+|+.+++.|.+.|++|++++|++++. +.+.. .+..++.+|..|.+.+.++ +++
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~-------~~~~~-~~~~~~~~d~~~~~~l~~~~~~~---- 70 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV-------NAYAS-YATHAVIANATEENELLSLGIRN---- 70 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH-------HTTTT-TCSEEEECCTTCHHHHHTTTGGG----
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHH-hCCEEEEeCCCCHHHHHhcCCCC----
Confidence 34578999998 9999999999999999999999976543 11222 2567788999998877765 555
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+|+||++++.. .+.|. .++..+++.+++++|..++.
T Consensus 71 ~d~vi~~~~~~-------~~~~~----~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 71 FEYVIVAIGAN-------IQAST----LTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp CSEEEECCCSC-------HHHHH----HHHHHHHHTTCSEEEEECCS
T ss_pred CCEEEECCCCc-------hHHHH----HHHHHHHHcCCCeEEEEeCC
Confidence 99999987642 12232 36667788888877766544
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.89 E-value=8.8e-09 Score=101.34 Aligned_cols=129 Identities=18% Similarity=0.263 Sum_probs=87.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++++|+|+| +|++|+++++.|++.|++|++++|+.++.. .......++..+.+|+.|.+++.+++++ +|
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~------~la~~~~~~~~~~~Dv~d~~~l~~~l~~----~D 70 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAK------KLSAGVQHSTPISLDVNDDAALDAEVAK----HD 70 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHH------HTTTTCTTEEEEECCTTCHHHHHHHHTT----SS
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHH------HHHHhcCCceEEEeecCCHHHHHHHHcC----Cc
Confidence 457899998 799999999999999999999999875432 1111223577889999999999999987 99
Q ss_pred EEEEcccccCCC-C-cchhH--hH-------HHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHH
Q 043385 164 VVVSCLASRSGG-V-KDSWK--ID-------YEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAE 227 (405)
Q Consensus 164 ~Vv~~a~~~~~~-~-~~~~~--~n-------~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~ 227 (405)
+||||++..... . ...++ .| ...+.+++++|+++|+. +++..+. .|.......+..+++.
T Consensus 71 vVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~---~i~g~g~-~pg~~~~~a~~li~q~ 141 (450)
T 1ff9_A 71 LVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT---VMNEIGL-DPGIDHLYAIKTIEEV 141 (450)
T ss_dssp EEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE---EECSCBB-TTBHHHHHHHHHHHHH
T ss_pred EEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe---EEeCCCC-cCchHHHHHHHHHHHh
Confidence 999999863210 0 00111 11 23578899999999974 3444433 4444444555555543
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=1.1e-09 Score=101.57 Aligned_cols=83 Identities=17% Similarity=0.205 Sum_probs=66.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++++++|+||||+|++|+++++.|+++|++|++++|+.++..... +.+....++.++.+|++|++++.+++++
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~---- 188 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA---DSVNKRFKVNVTAAETADDASRAEAVKG---- 188 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHHHHHHTCCCEEEECCSHHHHHHHTTT----
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHH---HHHHhcCCcEEEEecCCCHHHHHHHHHh----
Confidence 457789999999999999999999999999999999865432111 1111112567788999999999998887
Q ss_pred ccEEEEcccc
Q 043385 162 IDVVVSCLAS 171 (405)
Q Consensus 162 ~d~Vv~~a~~ 171 (405)
+|+||||++.
T Consensus 189 ~DvlVn~ag~ 198 (287)
T 1lu9_A 189 AHFVFTAGAI 198 (287)
T ss_dssp CSEEEECCCT
T ss_pred CCEEEECCCc
Confidence 9999999974
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=1.6e-09 Score=101.64 Aligned_cols=114 Identities=12% Similarity=0.143 Sum_probs=77.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEec--CCCCcCCCCchhHhhhcc--CCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF--NVIAIAR--EKSGIRGRNDKEETLNQL--QGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r--~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
|||+||||+|++|++++..|+.+|. +++++++ ++++.......+...... ..+++...| +++.+++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~g-- 74 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDE-- 74 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTT--
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCC--
Confidence 5899999999999999999999884 6888887 432221100001111111 122332221 235566777
Q ss_pred CCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 160 TSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+|+|||+||.... ...+.++.|+.+++++++++++.+ +++|+++|-
T Consensus 75 --aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN 123 (313)
T 1hye_A 75 --SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN 123 (313)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred --CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence 9999999996532 224578999999999999999999 888888864
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.7e-08 Score=82.98 Aligned_cols=99 Identities=21% Similarity=0.239 Sum_probs=71.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++++|+|+|+ |.+|+++++.|.++|++|++++++++.. +.+.. .++.++.+|.+|++.+.++-- .++|
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~-------~~~~~-~~~~~~~gd~~~~~~l~~~~~---~~~d 72 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKI-------ELLED-EGFDAVIADPTDESFYRSLDL---EGVS 72 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHH-------HHHHH-TTCEEEECCTTCHHHHHHSCC---TTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHH-------HHHHH-CCCcEEECCCCCHHHHHhCCc---ccCC
Confidence 4578999998 9999999999999999999999987643 22333 368899999999998876521 2499
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
+||.+.+.. +.|. .+...+++.+..++|-..
T Consensus 73 ~vi~~~~~~--------~~n~----~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 73 AVLITGSDD--------EFNL----KILKALRSVSDVYAIVRV 103 (141)
T ss_dssp EEEECCSCH--------HHHH----HHHHHHHHHCCCCEEEEE
T ss_pred EEEEecCCH--------HHHH----HHHHHHHHhCCceEEEEE
Confidence 999876521 2333 345566666655665433
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.80 E-value=2.7e-08 Score=81.27 Aligned_cols=98 Identities=18% Similarity=0.329 Sum_probs=71.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~d 163 (405)
+|+|+|+|+ |.+|+.+++.|.+.|++|++++|+++.. +.+....++.++.+|..+++.+.++ +++ +|
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~-------~~~~~~~~~~~~~~d~~~~~~l~~~~~~~----~d 71 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC-------KKASAEIDALVINGDCTKIKTLEDAGIED----AD 71 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHHCSSEEEESCTTSHHHHHHTTTTT----CS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-------HHHHHhcCcEEEEcCCCCHHHHHHcCccc----CC
Confidence 478999998 9999999999999999999999976543 2222212677889999998877654 444 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
+||++.+.. ..| ..+...+++.+.+++|..+
T Consensus 72 ~vi~~~~~~--------~~~----~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 72 MYIAVTGKE--------EVN----LMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp EEEECCSCH--------HHH----HHHHHHHHHTTCCCEEEEC
T ss_pred EEEEeeCCc--------hHH----HHHHHHHHHcCCCEEEEEe
Confidence 999986521 123 2455667777877887544
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.79 E-value=1.3e-08 Score=95.04 Aligned_cols=112 Identities=13% Similarity=0.057 Sum_probs=77.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEec--CCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF--NVIAIAR--EKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r--~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
|||+||||+|++|+.++..|+.+|. +++++++ ++++.......+... ....++++.. | + .+++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~--- 70 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAG--- 70 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTT---
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCC---
Confidence 5899999999999999999999875 6888888 543321111111111 0012344433 2 2 334666
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+|+|||+|+.... ...+.+..|+.+++++++++++.+.+.+|+++|-
T Consensus 71 -aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 71 -SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp -CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 9999999996532 2235788999999999999999988888888754
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=2.6e-07 Score=77.22 Aligned_cols=103 Identities=17% Similarity=0.277 Sum_probs=74.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~ 160 (405)
...+++|+|+|+ |.+|+.+++.|.+.|++|++++|++++.. .+....++.++.+|..+++.+.++ +++
T Consensus 16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~-------~~~~~~g~~~~~~d~~~~~~l~~~~~~~--- 84 (155)
T 2g1u_A 16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFH-------RLNSEFSGFTVVGDAAEFETLKECGMEK--- 84 (155)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGG-------GSCTTCCSEEEESCTTSHHHHHTTTGGG---
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-------HHHhcCCCcEEEecCCCHHHHHHcCccc---
Confidence 345689999997 99999999999999999999999876542 222113677888999998877765 566
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHh-cCCCEEEEEccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRN-CGASHFVLLSAI 208 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~-~~v~~~V~~Ss~ 208 (405)
+|+||.+.+.. .....++..++. .+..++|...+.
T Consensus 85 -ad~Vi~~~~~~------------~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 85 -ADMVFAFTNDD------------STNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp -CSEEEECSSCH------------HHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred -CCEEEEEeCCc------------HHHHHHHHHHHHHCCCCeEEEEECC
Confidence 99999876531 122345556666 566677765543
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.64 E-value=9.4e-08 Score=91.62 Aligned_cols=95 Identities=20% Similarity=0.332 Sum_probs=72.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
-+.|||+|.|| |++|+.+++.|.+ .++|.+.+|+.++. +... +.+..+..|+.|.+++.+++++ +
T Consensus 14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~-------~~~~--~~~~~~~~d~~d~~~l~~~~~~----~ 78 (365)
T 3abi_A 14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENL-------EKVK--EFATPLKVDASNFDKLVEVMKE----F 78 (365)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHH-------HHHT--TTSEEEECCTTCHHHHHHHHTT----C
T ss_pred CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHH-------HHHh--ccCCcEEEecCCHHHHHHHHhC----C
Confidence 45578999999 9999999998865 58999999986543 2222 3577889999999999999998 9
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
|+||+++++.. ...++++|.++|+ ++|=+|
T Consensus 79 DvVi~~~p~~~-------------~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 79 ELVIGALPGFL-------------GFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp SEEEECCCGGG-------------HHHHHHHHHHHTC-EEEECC
T ss_pred CEEEEecCCcc-------------cchHHHHHHhcCc-ceEeee
Confidence 99999887531 2357788888875 666554
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.64 E-value=6.2e-08 Score=94.14 Aligned_cols=96 Identities=14% Similarity=0.224 Sum_probs=73.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC---CeEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG---FNVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
++|+|+|| |++|+.+++.|++.| .+|++.+|+.++..... +.+.. ..++..+.+|++|.+++.+++++.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la---~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-- 75 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIA---QSIKAKGYGEIDITTVDADSIEELVALINEV-- 75 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHH---HHHHHTTCCCCEEEECCTTCHHHHHHHHHHH--
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHH---HHhhhhcCCceEEEEecCCCHHHHHHHHHhh--
Confidence 68999999 999999999999998 38999999876543111 11111 135889999999999999999873
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS 200 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~ 200 (405)
++|+||||++... ...++++|.+.|+.
T Consensus 76 ~~DvVin~ag~~~-------------~~~v~~a~l~~g~~ 102 (405)
T 4ina_A 76 KPQIVLNIALPYQ-------------DLTIMEACLRTGVP 102 (405)
T ss_dssp CCSEEEECSCGGG-------------HHHHHHHHHHHTCC
T ss_pred CCCEEEECCCccc-------------ChHHHHHHHHhCCC
Confidence 5899999987531 24567778777764
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=1.5e-07 Score=83.14 Aligned_cols=78 Identities=19% Similarity=0.281 Sum_probs=58.6
Q ss_pred CCCCCeEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCC
Q 043385 82 NPKDINILVVGS----------------TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145 (405)
Q Consensus 82 ~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl 145 (405)
++++++|||||| +|++|.+++++|+++|++|++++++.. .. . ..++. ..|+
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~--~~g~~--~~dv 71 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------T--PPFVK--RVDV 71 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------C--CTTEE--EEEC
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------c--CCCCe--EEcc
Confidence 357899999999 799999999999999999999988652 11 0 12333 4688
Q ss_pred CCHHHHHHHHHhhCCCccEEEEccccc
Q 043385 146 TNLESLEKSLENLGTSIDVVVSCLASR 172 (405)
Q Consensus 146 ~d~~~l~~~~~~~~~~~d~Vv~~a~~~ 172 (405)
.+.+.+.+.+....+++|++|||||..
T Consensus 72 ~~~~~~~~~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 72 MTALEMEAAVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp CSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred CcHHHHHHHHHHhcCCCCEEEECCccc
Confidence 887766555433224599999999965
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.8e-07 Score=92.24 Aligned_cols=114 Identities=25% Similarity=0.346 Sum_probs=79.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+.++++|+|+|| |++|+.+++.|++. |++|++++|+.++.. .+....++..+.+|+.|.+++.+++++
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~-------~la~~~~~~~~~~D~~d~~~l~~~l~~--- 88 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQ-------ALAKPSGSKAISLDVTDDSALDKVLAD--- 88 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHH-------HHHGGGTCEEEECCTTCHHHHHHHHHT---
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHH-------HHHHhcCCcEEEEecCCHHHHHHHHcC---
Confidence 356789999998 99999999999998 789999999876542 222113577888999999999999988
Q ss_pred CccEEEEcccccCCC-C--------cchhHhHH--HHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 161 SIDVVVSCLASRSGG-V--------KDSWKIDY--EANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~-~--------~~~~~~n~--~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+|+|||+++..... . ..+++.++ ..+.+++++|+++|+. .++..+.
T Consensus 89 -~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv~---~i~g~G~ 145 (467)
T 2axq_A 89 -NDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGIT---VMNEIGL 145 (467)
T ss_dssp -SSEEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTCE---EECSCBB
T ss_pred -CCEEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCCE---EEecCCc
Confidence 99999998864210 0 11122222 3357788888888863 3454444
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.55 E-value=3.6e-07 Score=76.08 Aligned_cols=96 Identities=18% Similarity=0.226 Sum_probs=69.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-CCcCCCCchhHhhh--ccCCcEEEEcCCCCHHHHHHH-HHhhCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK-SGIRGRNDKEETLN--QLQGASVCFSDVTNLESLEKS-LENLGT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~-~~~~~~ 160 (405)
.++|+|+|+ |.+|+.+++.|.+.|++|+++++++ +.. +.+. ...++.++.||.+|++.+.++ +++
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~-------~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~--- 71 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDI-------KQLEQRLGDNADVIPGDSNDSSVLKKAGIDR--- 71 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHH-------HHHHHHHCTTCEEEESCTTSHHHHHHHTTTT---
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHH-------HHHHHhhcCCCeEEEcCCCCHHHHHHcChhh---
Confidence 468999997 9999999999999999999999974 211 1111 123789999999999998876 666
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhc-CCCEEEE
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNC-GASHFVL 204 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~ 204 (405)
+|+||.+.+.. +.|. .+...+++. +..++|-
T Consensus 72 -ad~vi~~~~~d--------~~n~----~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 72 -CRAILALSDND--------ADNA----FVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp -CSEEEECSSCH--------HHHH----HHHHHHHHHTSSSCEEE
T ss_pred -CCEEEEecCCh--------HHHH----HHHHHHHHHCCCCEEEE
Confidence 99999865421 2333 344455555 5556664
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.55 E-value=3e-07 Score=81.38 Aligned_cols=79 Identities=24% Similarity=0.390 Sum_probs=56.2
Q ss_pred CCCeEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC
Q 043385 84 KDINILVVGS----------------TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147 (405)
Q Consensus 84 ~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 147 (405)
++|+|||||| +|++|.+++++|+++|++|+++.|+..... ....++.++ |+..
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~---------~~~~~~~~~--~v~s 70 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP---------EPHPNLSIR--EITN 70 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC---------CCCTTEEEE--ECCS
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------cCCCCeEEE--EHhH
Confidence 4789999999 999999999999999999999999764211 001245444 5556
Q ss_pred HHHHHHHHHhhCCCccEEEEcccccC
Q 043385 148 LESLEKSLENLGTSIDVVVSCLASRS 173 (405)
Q Consensus 148 ~~~l~~~~~~~~~~~d~Vv~~a~~~~ 173 (405)
.+.+.+++....+++|++||+||...
T Consensus 71 ~~em~~~v~~~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 71 TKDLLIEMQERVQDYQVLIHSMAVSD 96 (232)
T ss_dssp HHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred HHHHHHHHHHhcCCCCEEEEcCcccc
Confidence 65544444332235999999999653
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.41 E-value=7e-07 Score=78.99 Aligned_cols=96 Identities=18% Similarity=0.303 Sum_probs=70.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~d~ 164 (405)
|+|+|+|+ |.+|+++++.|.++|++|++++++++.. +.+....++.++.+|.+|++.+.++ +++ +|+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~-------~~l~~~~~~~~i~gd~~~~~~l~~a~i~~----ad~ 68 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELC-------EEFAKKLKATIIHGDGSHKEILRDAEVSK----NDV 68 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHH-------HHHHHHSSSEEEESCTTSHHHHHHHTCCT----TCE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-------HHHHHHcCCeEEEcCCCCHHHHHhcCccc----CCE
Confidence 57999997 9999999999999999999999987653 2222223788999999999988876 444 999
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHh-cCCCEEEEE
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRN-CGASHFVLL 205 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~-~~v~~~V~~ 205 (405)
||-+.+.. ..|. .+...+++ .+..++|-.
T Consensus 69 vi~~~~~d--------~~n~----~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 69 VVILTPRD--------EVNL----FIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp EEECCSCH--------HHHH----HHHHHHHHTSCCCEEEEC
T ss_pred EEEecCCc--------HHHH----HHHHHHHHHcCCCeEEEE
Confidence 99765421 1232 24445555 577777643
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.39 E-value=7.6e-07 Score=76.44 Aligned_cols=97 Identities=20% Similarity=0.309 Sum_probs=71.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH--HHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS--LENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~--~~~~~ 159 (405)
..+++|+|+|+ |.+|+.+++.|.+. |++|+++++++++. +.+.. .++.++.+|.+|++.+.++ +++
T Consensus 37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~-------~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~-- 105 (183)
T 3c85_A 37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAA-------QQHRS-EGRNVISGDATDPDFWERILDTGH-- 105 (183)
T ss_dssp CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHH-------HHHHH-TTCCEEECCTTCHHHHHTBCSCCC--
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHH-------HHHHH-CCCCEEEcCCCCHHHHHhccCCCC--
Confidence 44678999996 99999999999999 99999999987653 22333 3678899999998877765 554
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcC-CCEEEE
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCG-ASHFVL 204 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~-v~~~V~ 204 (405)
+|+||.+.+. ......++..+++.+ ..++|.
T Consensus 106 --ad~vi~~~~~------------~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 106 --VKLVLLAMPH------------HQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp --CCEEEECCSS------------HHHHHHHHHHHHHTTCCSEEEE
T ss_pred --CCEEEEeCCC------------hHHHHHHHHHHHHHCCCCEEEE
Confidence 9999987652 122334556677766 445554
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=2e-06 Score=80.42 Aligned_cols=108 Identities=18% Similarity=0.175 Sum_probs=76.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC---HHHHHHHHHhhCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN---LESLEKSLENLGT 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d---~~~l~~~~~~~~~ 160 (405)
|||.|+||+|++|..++..|+..| .+|+++++++. .. ....+.... . .+++.. .+++++++++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~--~~---~a~dL~~~~-~---~~~l~~~~~t~d~~~a~~~--- 68 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PG---VAADLSHIE-T---RATVKGYLGPEQLPDCLKG--- 68 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HH---HHHHHTTSS-S---SCEEEEEESGGGHHHHHTT---
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc--HH---HHHHHhccC-c---CceEEEecCCCCHHHHhCC---
Confidence 589999999999999999999888 78999999861 11 011122110 0 011211 2347778888
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||+++|.... ...+....|+..++.+++.+.+.+.+ ++|++|
T Consensus 69 -aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s 117 (314)
T 1mld_A 69 -CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (314)
T ss_dssp -CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred -CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 9999999986532 23457789999999999999887654 677654
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=3.4e-07 Score=86.15 Aligned_cols=111 Identities=16% Similarity=0.169 Sum_probs=76.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC--e-----EEEEecCCC--CcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF--N-----VIAIAREKS--GIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEK 153 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~--~-----V~~l~r~~~--~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~ 153 (405)
.++|+||||+|+||++++..|+..|. + ++++++++. ...+.. ..+.+ .+-. .++...+...+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a---~DL~~~~~~~~----~~~~~~~~~~~ 75 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVL---MELQDCALPLL----KDVIATDKEEI 75 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHH---HHHHHTCCTTE----EEEEEESCHHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhH---hhhHhhhhccc----CCEEEcCCcHH
Confidence 47899999999999999999998774 4 899998642 111111 11221 1111 12222233566
Q ss_pred HHHhhCCCccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCC--EEEEEc
Q 043385 154 SLENLGTSIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGAS--HFVLLS 206 (405)
Q Consensus 154 ~~~~~~~~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~--~~V~~S 206 (405)
.+++ +|+||++||... .+..+.++.|+..++++++++++.+.+ +++.+|
T Consensus 76 ~~~d----aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvs 129 (333)
T 5mdh_A 76 AFKD----LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (333)
T ss_dssp HTTT----CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred HhCC----CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 6777 999999998653 245568899999999999999998865 566666
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.29 E-value=9.1e-07 Score=76.92 Aligned_cols=103 Identities=22% Similarity=0.247 Sum_probs=67.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+++|+||||+|.||..+++.+...|++|++++|++++. +..... +... ..|..+.+..+...+... +++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-------~~~~~~-g~~~-~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-------EMLSRL-GVEY-VGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-------HHHHTT-CCSE-EEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHc-CCCE-EeeCCcHHHHHHHHHHhCCCCC
Confidence 468999999999999999999999999999999976543 122222 3322 247766554443333211 359
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
|+||+|+|.. .....++.++.. +++|.+++...
T Consensus 109 D~vi~~~g~~-------------~~~~~~~~l~~~--G~~v~~g~~~~ 141 (198)
T 1pqw_A 109 DVVLNSLAGE-------------AIQRGVQILAPG--GRFIELGKKDV 141 (198)
T ss_dssp EEEEECCCTH-------------HHHHHHHTEEEE--EEEEECSCGGG
T ss_pred eEEEECCchH-------------HHHHHHHHhccC--CEEEEEcCCCC
Confidence 9999998721 123344444443 48999887653
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.28 E-value=5.5e-06 Score=67.75 Aligned_cols=73 Identities=19% Similarity=0.398 Sum_probs=60.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~d 163 (405)
.++|+|.|+ |.+|+.+++.|.+.|++|++++++++.. +.+.. .++.++.+|.++++.+.++ +++ +|
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~-------~~~~~-~g~~~i~gd~~~~~~l~~a~i~~----ad 73 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRV-------DELRE-RGVRAVLGNAANEEIMQLAHLEC----AK 73 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHH-------HHHHH-TTCEEEESCTTSHHHHHHTTGGG----CS
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHH-------HHHHH-cCCCEEECCCCCHHHHHhcCccc----CC
Confidence 468999998 9999999999999999999999998654 23333 4789999999999988765 444 99
Q ss_pred EEEEccc
Q 043385 164 VVVSCLA 170 (405)
Q Consensus 164 ~Vv~~a~ 170 (405)
+||.+.+
T Consensus 74 ~vi~~~~ 80 (140)
T 3fwz_A 74 WLILTIP 80 (140)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 9997654
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.19 E-value=2.9e-06 Score=75.79 Aligned_cols=94 Identities=18% Similarity=0.214 Sum_probs=69.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~d 163 (405)
.++|+|+|+ |.+|+.+++.|.+.|+ |++++++++.. +.+. .++.++.+|.+|++.+.++ +++ +|
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~-------~~~~--~~~~~i~gd~~~~~~l~~a~i~~----ad 73 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK-------KVLR--SGANFVHGDPTRVSDLEKANVRG----AR 73 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHH-------HHHH--TTCEEEESCTTCHHHHHHTTCTT----CS
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHH-------HHHh--cCCeEEEcCCCCHHHHHhcCcch----hc
Confidence 468999998 9999999999999999 99999987643 2233 4789999999999988876 666 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEE
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLL 205 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~ 205 (405)
.||.+.+.. +.|. .+...+++.+.+ ++|--
T Consensus 74 ~vi~~~~~d--------~~n~----~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 74 AVIVDLESD--------SETI----HCILGIRKIDESVRIIAE 104 (234)
T ss_dssp EEEECCSCH--------HHHH----HHHHHHHHHCSSSEEEEE
T ss_pred EEEEcCCCc--------HHHH----HHHHHHHHHCCCCeEEEE
Confidence 999765421 2333 345566766765 66543
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=3.6e-06 Score=76.92 Aligned_cols=37 Identities=22% Similarity=0.490 Sum_probs=29.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CCeEE-EEecCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSR-GFNVI-AIAREK 119 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~-~l~r~~ 119 (405)
+++|+|+|+|++|.+|+.+++.+.+. |++|+ ++++++
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~ 41 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG 41 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence 34579999999999999999988854 78877 445554
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=1.2e-05 Score=74.75 Aligned_cols=86 Identities=12% Similarity=0.171 Sum_probs=61.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+.++++++|+|+ |++|++++..|.+.|. +|+++.|+++.........+.+....+..+...++.+.+.+.+.+.+
T Consensus 150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~-- 226 (315)
T 3tnl_A 150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAE-- 226 (315)
T ss_dssp CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT--
T ss_pred CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcC--
Confidence 3467899999998 8999999999999998 89999998432111111111222212344555678888888888887
Q ss_pred CCccEEEEcccc
Q 043385 160 TSIDVVVSCLAS 171 (405)
Q Consensus 160 ~~~d~Vv~~a~~ 171 (405)
+|+|||+.+.
T Consensus 227 --aDiIINaTp~ 236 (315)
T 3tnl_A 227 --SVIFTNATGV 236 (315)
T ss_dssp --CSEEEECSST
T ss_pred --CCEEEECccC
Confidence 9999997653
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.2e-05 Score=75.83 Aligned_cols=114 Identities=14% Similarity=0.163 Sum_probs=75.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+.++||.|+|++|++|+.++..|+..| .+|+++++++++..+....+.... .+.. ++.-..+..+++++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~~~~-----~i~~t~d~~~al~d--- 76 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-FEGL-----NLTFTSDIKEALTD--- 76 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-CTTC-----CCEEESCHHHHHTT---
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-CCCC-----ceEEcCCHHHHhCC---
Confidence 346899999999999999999999998 589999987654332111111111 1111 11111235677887
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCE--EEEEc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASH--FVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~--~V~~S 206 (405)
+|+||.++|.... ...+.++.|+...+.+++.+.+.+.+- ++.+|
T Consensus 77 -ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs 126 (343)
T 3fi9_A 77 -AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF 126 (343)
T ss_dssp -EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred -CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence 9999999986432 234567899999999999998877543 45554
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=1.8e-05 Score=76.67 Aligned_cols=73 Identities=23% Similarity=0.504 Sum_probs=60.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~d 163 (405)
+++|+|+|. |.+|+.+++.|.+.|++|++++++++.. +.+.. .++.++.||.++++.|.++ +++ +|
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v-------~~~~~-~g~~vi~GDat~~~~L~~agi~~----A~ 70 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHI-------ETLRK-FGMKVFYGDATRMDLLESAGAAK----AE 70 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHH-------HHHHH-TTCCCEESCTTCHHHHHHTTTTT----CS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHH-------HHHHh-CCCeEEEcCCCCHHHHHhcCCCc----cC
Confidence 468999998 9999999999999999999999998754 23333 3788999999999998876 554 99
Q ss_pred EEEEccc
Q 043385 164 VVVSCLA 170 (405)
Q Consensus 164 ~Vv~~a~ 170 (405)
+||.+.+
T Consensus 71 ~viv~~~ 77 (413)
T 3l9w_A 71 VLINAID 77 (413)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9997654
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.94 E-value=1.3e-05 Score=76.82 Aligned_cols=105 Identities=13% Similarity=0.256 Sum_probs=68.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+++|+|+|+ |.||+.+++.|...|++|++++|++++.. .....-+.. +.+|..+.+++.+.+++ +
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~-------~~~~~~g~~-~~~~~~~~~~l~~~~~~----~ 230 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQ-------YLDDVFGGR-VITLTATEANIKKSVQH----A 230 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-------HHHHHTTTS-EEEEECCHHHHHHHHHH----C
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHH-------HHHHhcCce-EEEecCCHHHHHHHHhC----C
Confidence 56789999999 99999999999999999999999875431 111101222 45677888889999988 9
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
|+||++++......... -++..++.++. + ..+|.+++.
T Consensus 231 DvVi~~~g~~~~~~~~l------i~~~~l~~mk~-g-g~iV~v~~~ 268 (369)
T 2eez_A 231 DLLIGAVLVPGAKAPKL------VTRDMLSLMKE-G-AVIVDVAVD 268 (369)
T ss_dssp SEEEECCC-------CC------SCHHHHTTSCT-T-CEEEECC--
T ss_pred CEEEECCCCCccccchh------HHHHHHHhhcC-C-CEEEEEecC
Confidence 99999988542100000 01233444432 2 478888865
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=1.5e-05 Score=75.08 Aligned_cols=104 Identities=20% Similarity=0.271 Sum_probs=66.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~ 161 (405)
..+++||||||+|.||..+++.+.+.|++|++++|++++. +..... +.. ...|+.+.+++.+.+.... ++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-------~~~~~~-g~~-~~~d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-------AYLKQI-GFD-AAFNYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHT-TCS-EEEETTSCSCHHHHHHHHCTTC
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHhc-CCc-EEEecCCHHHHHHHHHHHhCCC
Confidence 3568999999999999999999999999999999876543 222222 222 2247766334444443321 35
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+|+||+|+|.. .....++.++.. +++|.++....
T Consensus 215 ~d~vi~~~g~~-------------~~~~~~~~l~~~--G~~v~~g~~~~ 248 (333)
T 1v3u_A 215 YDCYFDNVGGE-------------FLNTVLSQMKDF--GKIAICGAISV 248 (333)
T ss_dssp EEEEEESSCHH-------------HHHHHHTTEEEE--EEEEECCCCC-
T ss_pred CeEEEECCChH-------------HHHHHHHHHhcC--CEEEEEecccc
Confidence 99999999831 122233333332 48888876543
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.83 E-value=3.1e-05 Score=73.44 Aligned_cols=104 Identities=19% Similarity=0.220 Sum_probs=67.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~ 161 (405)
..+++|||+||+|.||..+++.+...|++|++++|++++. +..... +... ..|+.+.+++.+.+.... ++
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-------~~~~~~-g~~~-~~d~~~~~~~~~~~~~~~~~~ 238 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-------ELFRSI-GGEV-FIDFTKEKDIVGAVLKATDGG 238 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-------HHHHHT-TCCE-EEETTTCSCHHHHHHHHHTSC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-------HHHHHc-CCce-EEecCccHhHHHHHHHHhCCC
Confidence 3568999999999999999999999999999999987653 222222 3332 237765444444443211 25
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+||+++|.. ......++.++.. +++|.+++..
T Consensus 239 ~D~vi~~~g~~------------~~~~~~~~~l~~~--G~iv~~g~~~ 272 (347)
T 2hcy_A 239 AHGVINVSVSE------------AAIEASTRYVRAN--GTTVLVGMPA 272 (347)
T ss_dssp EEEEEECSSCH------------HHHHHHTTSEEEE--EEEEECCCCT
T ss_pred CCEEEECCCcH------------HHHHHHHHHHhcC--CEEEEEeCCC
Confidence 99999998731 1223333333333 4898887654
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.82 E-value=4.3e-05 Score=68.87 Aligned_cols=104 Identities=17% Similarity=0.222 Sum_probs=66.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCC------------chh----Hhhhc-cCC--cEEEEc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRN------------DKE----ETLNQ-LQG--ASVCFS 143 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~------------~~~----~~~~~-~~~--v~~~~~ 143 (405)
++++|+|.|+ |.+|+.+++.|++.|. +|++++++.-...... .+. +.+.. .+. ++.+..
T Consensus 30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 4578999998 8999999999999996 8999998862211100 011 11111 133 444555
Q ss_pred CCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 144 DVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 144 Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
++++ +.+.+.+++ +|+||.+.. |...-..+.++|++.++. +|+.+
T Consensus 109 ~~~~-~~~~~~~~~----~DvVi~~~d------------~~~~~~~l~~~~~~~~~p-~i~~~ 153 (249)
T 1jw9_B 109 LLDD-AELAALIAE----HDLVLDCTD------------NVAVRNQLNAGCFAAKVP-LVSGA 153 (249)
T ss_dssp CCCH-HHHHHHHHT----SSEEEECCS------------SHHHHHHHHHHHHHHTCC-EEEEE
T ss_pred cCCH-hHHHHHHhC----CCEEEEeCC------------CHHHHHHHHHHHHHcCCC-EEEee
Confidence 5653 557777887 999998753 222334466677777764 66544
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=4.8e-05 Score=71.21 Aligned_cols=111 Identities=13% Similarity=0.220 Sum_probs=75.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhh-hcc-CCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETL-NQL-QGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~-~~~-~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..++|.|+|+ |.+|..++..|+..|. +|+++++++++..+....+... ... .++.+...| . +++++
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a~~~-- 73 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----EDCKD-- 73 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GGGTT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----HHhCC--
Confidence 3579999997 9999999999999986 8999999766543211111111 111 245554444 2 34566
Q ss_pred CCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 160 TSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.++|.... ...+.++.|....+.+++.+.+.+.+ .++.+|
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 9999999886432 23346788999999999999887654 455444
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.76 E-value=3.8e-05 Score=72.63 Aligned_cols=102 Identities=19% Similarity=0.160 Sum_probs=66.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--CC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--TS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--~~ 161 (405)
.+++|||+||+|.+|..+++.+...|++|++++|++++. +..... +...+ .|..+.+ +.+.+.... .+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~-------~~~~~~-ga~~~-~d~~~~~-~~~~~~~~~~~~~ 235 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKL-------RRAKAL-GADET-VNYTHPD-WPKEVRRLTGGKG 235 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHH-TCSEE-EETTSTT-HHHHHHHHTTTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHhc-CCCEE-EcCCccc-HHHHHHHHhCCCC
Confidence 468999999999999999999999999999999987653 222222 22222 4666543 222222211 35
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+|+||+++|. . .....++.++.. +++|.+++...
T Consensus 236 ~d~vi~~~g~-~------------~~~~~~~~l~~~--G~~v~~g~~~~ 269 (343)
T 2eih_A 236 ADKVVDHTGA-L------------YFEGVIKATANG--GRIAIAGASSG 269 (343)
T ss_dssp EEEEEESSCS-S------------SHHHHHHHEEEE--EEEEESSCCCS
T ss_pred ceEEEECCCH-H------------HHHHHHHhhccC--CEEEEEecCCC
Confidence 9999999982 1 123345555544 38998887654
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=3.3e-05 Score=72.18 Aligned_cols=112 Identities=13% Similarity=0.159 Sum_probs=67.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..+++|.|+|+ |.+|..++..|+..|. +|+++++++++..+....+..... ...+.+..+| . +++++
T Consensus 7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~----~a~~~-- 76 (326)
T 3vku_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y----SDAKD-- 76 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G----GGGTT--
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H----HHhcC--
Confidence 45689999997 9999999999999886 899999976544322111111111 1244544433 2 34566
Q ss_pred CCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 160 TSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.+||.... ...+.++.|..-.+.+++.+.+.+.+ .++.+|
T Consensus 77 --aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt 125 (326)
T 3vku_A 77 --ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp --CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred --CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 9999999986532 34457788998899999999887654 444444
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=5.7e-06 Score=72.62 Aligned_cols=73 Identities=19% Similarity=0.289 Sum_probs=49.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|+|+||+|++|+.+++.|++.|++|++++|++++..... +.... .+. .+|+. .+++.+++++ +|+|
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~--~~~--~~~~~-~~~~~~~~~~----~D~V 68 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKA---AEYRR--IAG--DASIT-GMKNEDAAEA----CDIA 68 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHH---HHHHH--HHS--SCCEE-EEEHHHHHHH----CSEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---HHhcc--ccc--cCCCC-hhhHHHHHhc----CCEE
Confidence 57999999999999999999999999999999865432100 00000 000 01222 2346667787 9999
Q ss_pred EEccc
Q 043385 166 VSCLA 170 (405)
Q Consensus 166 v~~a~ 170 (405)
|++..
T Consensus 69 i~~~~ 73 (212)
T 1jay_A 69 VLTIP 73 (212)
T ss_dssp EECSC
T ss_pred EEeCC
Confidence 99865
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=8.7e-05 Score=68.91 Aligned_cols=85 Identities=11% Similarity=0.210 Sum_probs=57.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+..+++++|+|+ |++|++++..|.+.|. +|+++.|++++........+.+....+..+...++.+.+.+.+.+.+
T Consensus 145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~--- 220 (312)
T 3t4e_A 145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS--- 220 (312)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH---
T ss_pred CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC---
Confidence 467889999998 9999999999999997 89999999432111111111122112344445567676555677777
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
+|+|||+.+.
T Consensus 221 -~DiIINaTp~ 230 (312)
T 3t4e_A 221 -ADILTNGTKV 230 (312)
T ss_dssp -CSEEEECSST
T ss_pred -ceEEEECCcC
Confidence 9999997653
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.70 E-value=3.7e-05 Score=72.20 Aligned_cols=103 Identities=16% Similarity=0.124 Sum_probs=66.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+++|||+||+|.||..+++.+...|++|++++|++++. +..... +... ..|..+.+..+...+... .++
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~-------~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-------QSALKA-GAWQ-VINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-------HHHHHH-TCSE-EEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHc-CCCE-EEECCCccHHHHHHHHhCCCCc
Confidence 468999999999999999999999999999999986543 222222 2222 246666544443333211 359
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
|+||+|+|.. .....++.++.. +++|.+++...
T Consensus 211 D~vi~~~g~~-------------~~~~~~~~l~~~--G~iv~~g~~~~ 243 (327)
T 1qor_A 211 RVVYDSVGRD-------------TWERSLDCLQRR--GLMVSFGNSSG 243 (327)
T ss_dssp EEEEECSCGG-------------GHHHHHHTEEEE--EEEEECCCTTC
T ss_pred eEEEECCchH-------------HHHHHHHHhcCC--CEEEEEecCCC
Confidence 9999999821 122334444433 48998886543
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00013 Score=68.97 Aligned_cols=104 Identities=15% Similarity=0.104 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-----C-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHh
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-----F-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLEN 157 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-----~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~ 157 (405)
++++|+|.||||.+|+.+++.|++++ + +|+++.+..............+.....+.+ .|+ +++ .+++
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~~~----~~~~ 80 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-EAA----VLGG 80 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-CHH----HHTT
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccC-CHH----HhcC
Confidence 35799999999999999999999987 4 777776433211000000000111012222 232 232 2446
Q ss_pred hCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC
Q 043385 158 LGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP 213 (405)
Q Consensus 158 ~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~ 213 (405)
+|+||.|++... ++.+++.+ +.|+ ++|-+|+..-..+
T Consensus 81 ----~DvVf~alg~~~-------------s~~~~~~~-~~G~-~vIDlSa~~R~~~ 117 (352)
T 2nqt_A 81 ----HDAVFLALPHGH-------------SAVLAQQL-SPET-LIIDCGADFRLTD 117 (352)
T ss_dssp ----CSEEEECCTTSC-------------CHHHHHHS-CTTS-EEEECSSTTTCSC
T ss_pred ----CCEEEECCCCcc-------------hHHHHHHH-hCCC-EEEEECCCccCCc
Confidence 999999887532 44567777 7785 7888888765443
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=6.1e-05 Score=70.97 Aligned_cols=103 Identities=19% Similarity=0.196 Sum_probs=66.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
..+++|||+||+|.||..+++.+...|++|++++|++++. +.+ ... +...+ .|..+.+..+...+...++
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-------~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKC-------RFLVEEL-GFDGA-IDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHTT-CCSEE-EETTTSCHHHHHHHHCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHc-CCCEE-EECCCHHHHHHHHHhcCCC
Confidence 3568999999999999999999999999999999987653 222 232 33222 3555544333332211136
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+||+|+|.. .....++.++.. +++|.++...
T Consensus 219 ~d~vi~~~g~~-------------~~~~~~~~l~~~--G~iv~~G~~~ 251 (336)
T 4b7c_A 219 IDVFFDNVGGE-------------ILDTVLTRIAFK--ARIVLCGAIS 251 (336)
T ss_dssp EEEEEESSCHH-------------HHHHHHTTEEEE--EEEEECCCGG
T ss_pred ceEEEECCCcc-------------hHHHHHHHHhhC--CEEEEEeecc
Confidence 99999998831 122333333333 4888887665
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.69 E-value=4.7e-05 Score=71.68 Aligned_cols=102 Identities=20% Similarity=0.183 Sum_probs=65.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+++|||+||+|.||..+++.+...|++|++++|++++. +..... +... ..|..+.+..+...+... .++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~-------~~~~~~-g~~~-~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA-------ETARKL-GCHH-TINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHH-TCSE-EEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHc-CCCE-EEECCCHHHHHHHHHHhCCCCC
Confidence 467999999999999999999999999999999987543 122222 2222 236665443333222111 359
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
|+||+|+|.. .....++.++.. +++|.++...
T Consensus 216 d~vi~~~g~~-------------~~~~~~~~l~~~--G~iv~~g~~~ 247 (333)
T 1wly_A 216 DVVYDSIGKD-------------TLQKSLDCLRPR--GMCAAYGHAS 247 (333)
T ss_dssp EEEEECSCTT-------------THHHHHHTEEEE--EEEEECCCTT
T ss_pred eEEEECCcHH-------------HHHHHHHhhccC--CEEEEEecCC
Confidence 9999999841 122334444433 4888887654
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.67 E-value=7.6e-05 Score=70.85 Aligned_cols=100 Identities=18% Similarity=0.288 Sum_probs=64.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+++|||+||+|.+|..+++.+...|++|++++|++++. +..... +... ..|..+.+..+++.+... .++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~-------~~~~~~-ga~~-~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-------KIVLQN-GAHE-VFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHT-TCSE-EEETTSTTHHHHHHHHHCTTCE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHH-------HHHHHc-CCCE-EEeCCCchHHHHHHHHcCCCCc
Confidence 467999999999999999999999999999999987653 222222 2222 246665443333322111 259
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
|+||+|+|.. .....++.++.. +++|.++.
T Consensus 241 D~vi~~~G~~-------------~~~~~~~~l~~~--G~iv~~g~ 270 (351)
T 1yb5_A 241 DIIIEMLANV-------------NLSKDLSLLSHG--GRVIVVGS 270 (351)
T ss_dssp EEEEESCHHH-------------HHHHHHHHEEEE--EEEEECCC
T ss_pred EEEEECCChH-------------HHHHHHHhccCC--CEEEEEec
Confidence 9999998731 122334444433 47887774
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=4.8e-05 Score=71.97 Aligned_cols=102 Identities=17% Similarity=0.207 Sum_probs=65.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-CC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-TS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~ 161 (405)
.+++|||+||+|.||..+++.+...|++|++++|++++. +... .. +...+ .|..+.+++.+.++... ++
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~-------~~~~~~~-g~~~~-~d~~~~~~~~~~~~~~~~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKV-------DLLKTKF-GFDDA-FNYKEESDLTAALKRCFPNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHTS-CCSEE-EETTSCSCSHHHHHHHCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHHc-CCceE-EecCCHHHHHHHHHHHhCCC
Confidence 568999999999999999999999999999999986543 2222 22 33222 36655433333333211 35
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+||+|+|. ......++.++.. +++|.++...
T Consensus 226 ~d~vi~~~g~-------------~~~~~~~~~l~~~--G~~v~~G~~~ 258 (345)
T 2j3h_A 226 IDIYFENVGG-------------KMLDAVLVNMNMH--GRIAVCGMIS 258 (345)
T ss_dssp EEEEEESSCH-------------HHHHHHHTTEEEE--EEEEECCCGG
T ss_pred CcEEEECCCH-------------HHHHHHHHHHhcC--CEEEEEcccc
Confidence 9999999873 1122333333332 4888877554
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.65 E-value=8.2e-05 Score=70.14 Aligned_cols=92 Identities=17% Similarity=0.218 Sum_probs=69.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~d 163 (405)
.++|+|.|+ |.+|+.+++.|.++|+ |++++++++.. + +.. .++.++.||.+|++.++++ +++ +|
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~-------~-~~~-~~~~~i~gd~~~~~~L~~a~i~~----a~ 179 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK-------K-VLR-SGANFVHGDPTRVSDLEKANVRG----AR 179 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHH-------H-HHH-TTCEEEESCTTSHHHHHHTCSTT----EE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhh-------h-HHh-CCcEEEEeCCCCHHHHHhcChhh----cc
Confidence 358999997 9999999999999999 99999887653 2 322 4789999999999999877 665 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC-EEE
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS-HFV 203 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V 203 (405)
.|+-+.+.. +.|+ .+...+++.+.+ ++|
T Consensus 180 ~vi~~~~~d--------~~n~----~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 180 AVIVDLESD--------SETI----HCILGIRKIDESVRII 208 (336)
T ss_dssp EEEECCSSH--------HHHH----HHHHHHHTTCTTSEEE
T ss_pred EEEEcCCcc--------HHHH----HHHHHHHHHCCCCeEE
Confidence 999765311 2333 345566777765 555
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=9.3e-05 Score=70.55 Aligned_cols=104 Identities=15% Similarity=0.160 Sum_probs=66.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~ 161 (405)
..+.+|||+||+|.+|..+++.+...|++|+++++++++. +..... +...+ .|..+.+ +.+.+.... .+
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~-------~~~~~~-Ga~~~-~~~~~~~-~~~~~~~~~~~g 231 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS-------AFLKSL-GCDRP-INYKTEP-VGTVLKQEYPEG 231 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHT-TCSEE-EETTTSC-HHHHHHHHCTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH-------HHHHHc-CCcEE-EecCChh-HHHHHHHhcCCC
Confidence 3567999999999999999999999999999999986543 222222 33222 2444332 233332211 35
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
+|+||+|+|. ......++.++.. +++|.+++...+
T Consensus 232 ~D~vid~~g~-------------~~~~~~~~~l~~~--G~iv~~g~~~~~ 266 (362)
T 2c0c_A 232 VDVVYESVGG-------------AMFDLAVDALATK--GRLIVIGFISGY 266 (362)
T ss_dssp EEEEEECSCT-------------HHHHHHHHHEEEE--EEEEECCCGGGT
T ss_pred CCEEEECCCH-------------HHHHHHHHHHhcC--CEEEEEeCCCCc
Confidence 9999999873 1233455555544 489988876543
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=6.3e-05 Score=71.54 Aligned_cols=101 Identities=18% Similarity=0.184 Sum_probs=64.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|||+||+|.||..+++.+...|+ +|+++++++++. +.... . +... ..|..+.+..+...+...+++|
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~-------~~~~~~~-g~~~-~~d~~~~~~~~~~~~~~~~~~d 232 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKC-------ILLTSEL-GFDA-AINYKKDNVAEQLRESCPAGVD 232 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHH-------HHHHHTS-CCSE-EEETTTSCHHHHHHHHCTTCEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHH-------HHHHHHc-CCce-EEecCchHHHHHHHHhcCCCCC
Confidence 8999999999999999999999999 999999986543 22222 2 3322 2466654322222221112599
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+||+|+|. ......++.++.. +++|.++....
T Consensus 233 ~vi~~~G~-------------~~~~~~~~~l~~~--G~iv~~G~~~~ 264 (357)
T 2zb4_A 233 VYFDNVGG-------------NISDTVISQMNEN--SHIILCGQISQ 264 (357)
T ss_dssp EEEESCCH-------------HHHHHHHHTEEEE--EEEEECCCGGG
T ss_pred EEEECCCH-------------HHHHHHHHHhccC--cEEEEECCccc
Confidence 99999982 1223344444433 48888876543
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=6.5e-05 Score=71.39 Aligned_cols=103 Identities=12% Similarity=0.139 Sum_probs=66.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+++|||+||+|.||..+++.+...|++|++++|++++. +..... +... ..|..+.+..+...+... .++
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~-------~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKL-------QMAEKL-GAAA-GFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHH-TCSE-EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHc-CCcE-EEecCChHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999987543 222222 2222 246655443333332111 359
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
|+||+|+|... ....++.++.. +++|.++....
T Consensus 233 d~vi~~~G~~~-------------~~~~~~~l~~~--G~iv~~G~~~~ 265 (354)
T 2j8z_A 233 NLILDCIGGSY-------------WEKNVNCLALD--GRWVLYGLMGG 265 (354)
T ss_dssp EEEEESSCGGG-------------HHHHHHHEEEE--EEEEECCCTTC
T ss_pred eEEEECCCchH-------------HHHHHHhccCC--CEEEEEeccCC
Confidence 99999998421 22334444433 48888876543
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00014 Score=68.31 Aligned_cols=112 Identities=17% Similarity=0.143 Sum_probs=71.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhH-hhhccC-CcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEE-TLNQLQ-GASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~-~~~~~~-~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+.|+|.|+|| |.+|..++..|+..|+ +|+++++++++.......+. ...... ...+.. ..++++++++
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d~~ea~~~--- 78 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALTG--- 78 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHTT---
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-----eCCHHHHhCC---
Confidence 3479999999 9999999999999998 99999998865542111111 111111 111111 0224556777
Q ss_pred CccEEEEcccccCC--------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEE
Q 043385 161 SIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~ 205 (405)
+|+||-++|.... ...+....|..-.+.+.+.+.+...+-+|.+
T Consensus 79 -aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~ 130 (331)
T 1pzg_A 79 -ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIV 130 (331)
T ss_dssp -CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred -CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE
Confidence 9999998875431 2334566788888888888887754434433
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0002 Score=66.65 Aligned_cols=111 Identities=13% Similarity=0.208 Sum_probs=71.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhh--ccCCcEEEE-cCCCCHHHHHHHHHhhCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLN--QLQGASVCF-SDVTNLESLEKSLENLGT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~--~~~~v~~~~-~Dl~d~~~l~~~~~~~~~ 160 (405)
+|+|.|+|| |.+|..++..|+..|+ +|+++++++++.......+.... .....++.. .| . +++++
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~~--- 70 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN------Y-ADTAN--- 70 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC------G-GGGTT---
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCC------H-HHHCC---
Confidence 368999999 9999999999999996 89999998765432111111100 011222222 33 2 33666
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
+|+||.++|.... ...+....|....+.+.+.+.+.+.+.+|.+.|
T Consensus 71 -aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 119 (309)
T 1ur5_A 71 -SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp -CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence 9999999886432 223456778888899999998887665655543
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00017 Score=68.20 Aligned_cols=78 Identities=21% Similarity=0.306 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--C
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--T 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--~ 160 (405)
..+.+|||+||+|.||...++.+...|++|+++++++++. +.......-.++..+ .+ +.+.+.... .
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-------~~~~~~ga~~v~~~~-~~---~~~~v~~~~~~~ 226 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-------EFVKSVGADIVLPLE-EG---WAKAVREATGGA 226 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-------HHHHHHTCSEEEESS-TT---HHHHHHHHTTTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHhcCCcEEecCc-hh---HHHHHHHHhCCC
Confidence 3568999999999999999999999999999999987654 222222222333333 22 333332221 2
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
++|+||+|+|.
T Consensus 227 g~Dvvid~~g~ 237 (342)
T 4eye_A 227 GVDMVVDPIGG 237 (342)
T ss_dssp CEEEEEESCC-
T ss_pred CceEEEECCch
Confidence 59999999884
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.52 E-value=8e-05 Score=73.29 Aligned_cols=74 Identities=16% Similarity=0.348 Sum_probs=59.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
.|+|+|.|+ |-+|+++++.|.++||+|++++++++.. +.+...-++.++.||-++++.|+++=-+ ++|+
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~-------~~~~~~~~~~~i~Gd~~~~~~L~~Agi~---~ad~ 71 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRL-------RELQDKYDLRVVNGHASHPDVLHEAGAQ---DADM 71 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHH-------HHHHHHSSCEEEESCTTCHHHHHHHTTT---TCSE
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHH-------HHHHHhcCcEEEEEcCCCHHHHHhcCCC---cCCE
Confidence 489999999 9999999999999999999999987654 3333223789999999999999876322 4999
Q ss_pred EEEcc
Q 043385 165 VVSCL 169 (405)
Q Consensus 165 Vv~~a 169 (405)
+|-+.
T Consensus 72 ~ia~t 76 (461)
T 4g65_A 72 LVAVT 76 (461)
T ss_dssp EEECC
T ss_pred EEEEc
Confidence 98543
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00042 Score=65.56 Aligned_cols=99 Identities=11% Similarity=0.214 Sum_probs=64.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHH---HHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLE---SLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~l~~~~~~~~~~~ 162 (405)
++|+|+||+|.||...++.+...|++|+++++++++. +....+ +...+ .|..+.+ .+.+...+ .++
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~-------~~~~~~-Ga~~~-~~~~~~~~~~~v~~~~~~--~g~ 234 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI-------ALLKDI-GAAHV-LNEKAPDFEATLREVMKA--EQP 234 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH-------HHHHHH-TCSEE-EETTSTTHHHHHHHHHHH--HCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHc-CCCEE-EECCcHHHHHHHHHHhcC--CCC
Confidence 7899999999999999999999999999999987654 222222 22221 2444332 34444432 259
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
|+||+|+|.. .....++.++.. +++|.++....
T Consensus 235 D~vid~~g~~-------------~~~~~~~~l~~~--G~iv~~G~~~~ 267 (349)
T 3pi7_A 235 RIFLDAVTGP-------------LASAIFNAMPKR--ARWIIYGRLDP 267 (349)
T ss_dssp CEEEESSCHH-------------HHHHHHHHSCTT--CEEEECCCSCC
T ss_pred cEEEECCCCh-------------hHHHHHhhhcCC--CEEEEEeccCC
Confidence 9999998842 123344554443 48998876544
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00015 Score=67.49 Aligned_cols=110 Identities=15% Similarity=0.145 Sum_probs=72.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-C--CeEEEEecCCCCcCCCCchhHhhhccC-CcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSR-G--FNVIAIAREKSGIRGRNDKEETLNQLQ-GASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~-g--~~V~~l~r~~~~~~~~~~~~~~~~~~~-~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
|||.|+||+|.+|..++..|..+ + .+++++++++ +..+. ...+.+.+ ...+... .. +...+.+++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~---a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~---- 69 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGV---AVDLSHIPTAVKIKGF-SG--EDATPALEG---- 69 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHH---HHHHHTSCSSEEEEEE-CS--SCCHHHHTT----
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhH---HHHhhCCCCCceEEEe-cC--CCcHHHhCC----
Confidence 68999999999999999998875 5 5899999876 32211 11222222 2222211 00 112456777
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.++|.... ...+.++.|..-.+.+.+++.+.+.+ .++.+|
T Consensus 70 aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt 118 (312)
T 3hhp_A 70 ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (312)
T ss_dssp CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence 9999999886532 34457889999999999998887644 455554
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00016 Score=66.31 Aligned_cols=80 Identities=23% Similarity=0.261 Sum_probs=55.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+.++++|+|+|+ |++|++++..|.+.|. +|++++|+.++.......... ..+.+.+...++.+ +.+.+.+
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~i~~~~~~~---l~~~l~~--- 194 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN--AVGREAVVGVDARG---IEDVIAA--- 194 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH--HHTSCCEEEECSTT---HHHHHHH---
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh--hcCCceEEEcCHHH---HHHHHhc---
Confidence 467889999998 9999999999999997 799999997654321111111 11233444445433 5667777
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
+|+|||+.+.
T Consensus 195 -~DiVInaTp~ 204 (283)
T 3jyo_A 195 -ADGVVNATPM 204 (283)
T ss_dssp -SSEEEECSST
T ss_pred -CCEEEECCCC
Confidence 9999998653
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00024 Score=65.22 Aligned_cols=110 Identities=19% Similarity=0.311 Sum_probs=63.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCc------------------hhHhhhccCCcEEEEc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRND------------------KEETLNQLQGASVCFS 143 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~------------------~~~~~~~~~~v~~~~~ 143 (405)
++..+|+|.|+ |++|+.+++.|++.| -+++++|.+.-......+ .+..+...-.++.+..
T Consensus 34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~ 112 (292)
T 3h8v_A 34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY 112 (292)
T ss_dssp GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence 34579999999 999999999999999 478898876522211111 0111111123445556
Q ss_pred CCCCHHHHHHHHHhh-----C--CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 144 DVTNLESLEKSLENL-----G--TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 144 Dl~d~~~l~~~~~~~-----~--~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
++++.+.+.+.++.+ . .++|+||++.- |...-..+-++|.+.++ .+|+.+
T Consensus 113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D------------n~~~R~~in~~c~~~~~-Pli~~g 169 (292)
T 3h8v_A 113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD------------NFEARMTINTACNELGQ-TWMESG 169 (292)
T ss_dssp CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS------------SHHHHHHHHHHHHHHTC-CEEEEE
T ss_pred cCCcHHHHHHHhhhhcccccccCCCCCEEEECCc------------chhhhhHHHHHHHHhCC-CEEEee
Confidence 676656666555210 0 13888887642 33333345566777775 355544
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0029 Score=56.43 Aligned_cols=81 Identities=20% Similarity=0.278 Sum_probs=52.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEE-EecCCCCcCCC--CchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIA-IAREKSGIRGR--NDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-l~r~~~~~~~~--~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+++|.|+|+ |.+|+.+++.+.+.++++++ ++|++....+. ...++.+. +..+ ..|++.++.+.+.++ ...+
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~---~~DV-vIDft~p~a~~~~~~-l~~g 76 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK---GADV-AIDFSNPNLLFPLLD-EDFH 76 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT---TCSE-EEECSCHHHHHHHHT-SCCC
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh---CCCE-EEEeCChHHHHHHHH-HhcC
Confidence 589999999 99999999999998777665 56654321110 00011111 2333 358888888777776 5467
Q ss_pred ccEEEEcccc
Q 043385 162 IDVVVSCLAS 171 (405)
Q Consensus 162 ~d~Vv~~a~~ 171 (405)
.++|+.+.|.
T Consensus 77 ~~vVigTTG~ 86 (243)
T 3qy9_A 77 LPLVVATTGE 86 (243)
T ss_dssp CCEEECCCSS
T ss_pred CceEeCCCCC
Confidence 8888876663
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0005 Score=64.22 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=75.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhc-c-CCcEEE-EcCCCCHHHHHHHHHhh
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQ-L-QGASVC-FSDVTNLESLEKSLENL 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~-~-~~v~~~-~~Dl~d~~~l~~~~~~~ 158 (405)
+++++|.|+|| |.+|..++..|+..|+ +|+++++++++..+....+..... . ....+. ..| . +++++
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d---~----~a~~~- 75 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND---Y----AAIEG- 75 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS---G----GGGTT-
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC---H----HHHCC-
Confidence 45679999999 9999999999999998 999999988764322111111111 0 123333 233 2 35666
Q ss_pred CCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 159 GTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.++|.... ...+.+..|..-.+.+++.+.+.+.+ .+|.+|
T Consensus 76 ---aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt 124 (324)
T 3gvi_A 76 ---ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT 124 (324)
T ss_dssp ---CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred ---CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence 9999998886432 34457788999999999998887644 555555
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00017 Score=59.98 Aligned_cols=77 Identities=22% Similarity=0.225 Sum_probs=53.2
Q ss_pred ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc-CCcEEEEcCCCCH--HHHHHHHHhhC---CCccEEEEc
Q 043385 95 GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL-QGASVCFSDVTNL--ESLEKSLENLG---TSIDVVVSC 168 (405)
Q Consensus 95 G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~--~~l~~~~~~~~---~~~d~Vv~~ 168 (405)
|.++.+.++.|.+.|++|++..|+...........+..... .....+.+|++++ ++++++++.+. ++ |++|||
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn 104 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC 104 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence 46889999999999999998888765432211111222221 2345667899999 88888776542 56 999999
Q ss_pred cccc
Q 043385 169 LASR 172 (405)
Q Consensus 169 a~~~ 172 (405)
||..
T Consensus 105 Agg~ 108 (157)
T 3gxh_A 105 LANY 108 (157)
T ss_dssp SBSH
T ss_pred CCCC
Confidence 9853
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00021 Score=67.41 Aligned_cols=99 Identities=18% Similarity=0.232 Sum_probs=64.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHH---HHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLE---SLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~l~~~~~~~~ 159 (405)
..+++|||+|| |.+|..+++.+...|++|++++|++++. +..... +...+ .|..+.+ .+.+...
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~-------~~~~~l-Ga~~~-~d~~~~~~~~~~~~~~~--- 229 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL-------ELAKEL-GADLV-VNPLKEDAAKFMKEKVG--- 229 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH-------HHHHHT-TCSEE-ECTTTSCHHHHHHHHHS---
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHHC-CCCEE-ecCCCccHHHHHHHHhC---
Confidence 34689999999 7799999999999999999999887653 222222 33322 4665433 2333222
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
++|+||+++|.. ......++.++.. +++|.++...
T Consensus 230 -~~d~vid~~g~~------------~~~~~~~~~l~~~--G~~v~~g~~~ 264 (339)
T 1rjw_A 230 -GVHAAVVTAVSK------------PAFQSAYNSIRRG--GACVLVGLPP 264 (339)
T ss_dssp -SEEEEEESSCCH------------HHHHHHHHHEEEE--EEEEECCCCS
T ss_pred -CCCEEEECCCCH------------HHHHHHHHHhhcC--CEEEEecccC
Confidence 499999998742 1233445555444 4888887654
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0033 Score=56.10 Aligned_cols=103 Identities=16% Similarity=0.163 Sum_probs=63.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCcc
Q 043385 86 INILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSID 163 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~d 163 (405)
|+|+|+|++|.+|+.+++.+.+. +++|+++....... +.+.. .+.. +..|++.++.+.+.+..+. .+++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl-------~~~~~-~~~D-vvIDfT~p~a~~~~~~~a~~~g~~ 71 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPL-------SLLTD-GNTE-VVIDFTHPDVVMGNLEFLIDNGIH 71 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCT-------HHHHH-TTCC-EEEECSCTTTHHHHHHHHHHTTCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCH-------HHHhc-cCCc-EEEEccChHHHHHHHHHHHHcCCC
Confidence 58999999999999999999876 89988766544332 11111 1233 4568888876655443211 3588
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAIC 209 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~ 209 (405)
+|+-..|... .....+.++|++. ++ .+++.+.++
T Consensus 72 ~VigTTG~~~-----------e~~~~l~~aa~~~~~~-~vv~a~N~s 106 (245)
T 1p9l_A 72 AVVGTTGFTA-----------ERFQQVESWLVAKPNT-SVLIAPNFA 106 (245)
T ss_dssp EEECCCCCCH-----------HHHHHHHHHHHTSTTC-EEEECSCCC
T ss_pred EEEcCCCCCH-----------HHHHHHHHHHHhCCCC-CEEEECCcc
Confidence 8886655321 1223455556655 54 566666544
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00011 Score=67.08 Aligned_cols=76 Identities=20% Similarity=0.241 Sum_probs=50.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+..+++|+|+|+ |.+|++++..|++.|++|++++|+.++..... +.+.... .+...|+ +.+.+ . +
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la---~~~~~~~--~~~~~~~---~~~~~--~----~ 180 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELA---KLFAHTG--SIQALSM---DELEG--H----E 180 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH---HHTGGGS--SEEECCS---GGGTT--C----C
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH---HHhhccC--CeeEecH---HHhcc--C----C
Confidence 456789999998 88999999999999999999999876542111 1111111 1222333 22222 2 4
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
+|+||++++..
T Consensus 181 ~DivVn~t~~~ 191 (271)
T 1nyt_A 181 FDLIINATSSG 191 (271)
T ss_dssp CSEEEECCSCG
T ss_pred CCEEEECCCCC
Confidence 99999998854
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00026 Score=69.45 Aligned_cols=40 Identities=15% Similarity=0.259 Sum_probs=35.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
..+.+|||+||+|.||...++.+...|.+|+++++++++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~ 258 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE 258 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 3568999999999999999999999999999999876543
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00029 Score=64.04 Aligned_cols=100 Identities=16% Similarity=0.295 Sum_probs=61.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEE-EecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSR-GFNVIA-IAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~-l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+++++|.|+||+|.+|+.+++.+.+. ++++++ ++|+.....+. ......+... ++.-.+++.+++++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~-----d~gel~g~~~---gv~v~~dl~~ll~~--- 73 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQ-----DAGAFLGKQT---GVALTDDIERVCAE--- 73 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTS-----BTTTTTTCCC---SCBCBCCHHHHHHH---
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccc-----cHHHHhCCCC---CceecCCHHHHhcC---
Confidence 34689999999999999999999876 577776 56664322110 0001111110 22222345666777
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+||+++. ...+...++.|.++|+ ++| +++.+
T Consensus 74 -~DVVIDfT~-------------p~a~~~~~~~al~~G~-~vV-igTTG 106 (272)
T 4f3y_A 74 -ADYLIDFTL-------------PEGTLVHLDAALRHDV-KLV-IGTTG 106 (272)
T ss_dssp -CSEEEECSC-------------HHHHHHHHHHHHHHTC-EEE-ECCCC
T ss_pred -CCEEEEcCC-------------HHHHHHHHHHHHHcCC-CEE-EECCC
Confidence 999999753 2345667788888887 455 45443
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00049 Score=61.93 Aligned_cols=107 Identities=19% Similarity=0.261 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCC------------chhH----hhhc-cCCcE--EEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRN------------DKEE----TLNQ-LQGAS--VCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~------------~~~~----~~~~-~~~v~--~~~ 142 (405)
+++.+|+|.|+ |.+|+++++.|+..|. ++++++++.-...... .+.+ .+.. .+.++ .+.
T Consensus 26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 34579999999 7799999999999995 7888887642211111 1111 1111 23444 333
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
.+++ .+.+.+.+++ +|+||++.. |...-..+.++|.+.++ .+|+.+..
T Consensus 105 ~~~~-~~~~~~~~~~----~DvVi~~~d------------~~~~r~~l~~~~~~~~~-p~i~~~~~ 152 (251)
T 1zud_1 105 QRLT-GEALKDAVAR----ADVVLDCTD------------NMATRQEINAACVALNT-PLITASAV 152 (251)
T ss_dssp SCCC-HHHHHHHHHH----CSEEEECCS------------SHHHHHHHHHHHHHTTC-CEEEEEEE
T ss_pred ccCC-HHHHHHHHhc----CCEEEECCC------------CHHHHHHHHHHHHHhCC-CEEEEecc
Confidence 3443 4567788888 999998643 22333445567777776 46665543
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0003 Score=66.28 Aligned_cols=104 Identities=19% Similarity=0.262 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~ 161 (405)
..+.+|||+||+|.+|...++.+...|++|+++++++++. +..... +...+ .|..+.+..+.+.+... .+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-------~~~~~l-ga~~~-~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT-------EELLRL-GAAYV-IDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTH-------HHHHHH-TCSEE-EETTTSCHHHHHHHHTTTSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHhC-CCcEE-EeCCcccHHHHHHHHhCCCC
Confidence 3567999999999999999999888999999999988764 222222 22222 25544332222222111 36
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+|+||+|+|.. .+...++.++.. +++|.++....
T Consensus 214 ~Dvvid~~g~~-------------~~~~~~~~l~~~--G~iv~~G~~~~ 247 (340)
T 3gms_A 214 ADAAIDSIGGP-------------DGNELAFSLRPN--GHFLTIGLLSG 247 (340)
T ss_dssp EEEEEESSCHH-------------HHHHHHHTEEEE--EEEEECCCTTS
T ss_pred CcEEEECCCCh-------------hHHHHHHHhcCC--CEEEEEeecCC
Confidence 99999998842 112233333322 48888876543
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00029 Score=66.78 Aligned_cols=100 Identities=14% Similarity=0.199 Sum_probs=64.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHH---HHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLE---SLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~l~~~~~~~~~ 160 (405)
.+.+|||+||+|.||..+++.+...|++|+++++++++. +..... +...+ .|..+.+ .+.+.. + +
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-------~~~~~l-Ga~~~-~~~~~~~~~~~~~~~~-~--~ 234 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKC-------EACERL-GAKRG-INYRSEDFAAVIKAET-G--Q 234 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHH-TCSEE-EETTTSCHHHHHHHHH-S--S
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHhc-CCCEE-EeCCchHHHHHHHHHh-C--C
Confidence 567999999999999999999999999999999987654 222222 22221 3444433 233333 2 4
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
++|+||+|+|.. .....++.++.. +++|.++....
T Consensus 235 g~Dvvid~~g~~-------------~~~~~~~~l~~~--G~iv~~g~~~~ 269 (353)
T 4dup_A 235 GVDIILDMIGAA-------------YFERNIASLAKD--GCLSIIAFLGG 269 (353)
T ss_dssp CEEEEEESCCGG-------------GHHHHHHTEEEE--EEEEECCCTTC
T ss_pred CceEEEECCCHH-------------HHHHHHHHhccC--CEEEEEEecCC
Confidence 699999998842 122233333333 47888776543
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00024 Score=65.50 Aligned_cols=110 Identities=7% Similarity=0.012 Sum_probs=73.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhc-c-CCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQ-L-QGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~-~-~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
|+|.|+|| |.+|..++..|+..|+ +|+++++++++..+....+..... . ....+... +| .+++++
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~---- 69 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKG---- 69 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTT----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCC----
Confidence 68999999 9999999999999987 899999988654321111111111 1 12333322 12 245666
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.++|.... ...+....|..-.+.+++.+.+.+.+ .+|.+|
T Consensus 70 aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs 118 (294)
T 1oju_A 70 SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 9999998886532 23356788999999999999888644 455555
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00021 Score=67.67 Aligned_cols=77 Identities=21% Similarity=0.361 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHH---HHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLES---LEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---l~~~~~~~~ 159 (405)
.+++|||+||+|.||..+++.+... |++|+++++++++. +..... +... ..|..+.+. +.+....
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~-------~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~-- 238 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-------EAAKRA-GADY-VINASMQDPLAEIRRITES-- 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-------HHHHHH-TCSE-EEETTTSCHHHHHHHHTTT--
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHH-------HHHHHh-CCCE-EecCCCccHHHHHHHHhcC--
Confidence 5679999999999999999999998 99999999887543 222222 2222 235555443 3333320
Q ss_pred CCccEEEEcccc
Q 043385 160 TSIDVVVSCLAS 171 (405)
Q Consensus 160 ~~~d~Vv~~a~~ 171 (405)
+++|+||+++|.
T Consensus 239 ~~~d~vi~~~g~ 250 (347)
T 1jvb_A 239 KGVDAVIDLNNS 250 (347)
T ss_dssp SCEEEEEESCCC
T ss_pred CCceEEEECCCC
Confidence 259999999884
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00041 Score=65.25 Aligned_cols=112 Identities=14% Similarity=0.191 Sum_probs=72.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-------CeEEEEecCCCCc--CCCCchhHhhhc--cCC-cEEEEcCCCCHHH
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-------FNVIAIAREKSGI--RGRNDKEETLNQ--LQG-ASVCFSDVTNLES 150 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~l~r~~~~~--~~~~~~~~~~~~--~~~-v~~~~~Dl~d~~~ 150 (405)
++.-||.|+||+|.||+.++-.|.... .++.+++..+... .+.. -.+.+ .+. ...+.++ |
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva---~DL~~~~~~~~~~~~~~~--~--- 93 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVE---AELEDCAFPLLDKVVVTA--D--- 93 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHH---HHHHHTTCTTEEEEEEES--C---
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhh---hhhhhcCccCCCcEEEcC--C---
Confidence 345699999999999999999888753 2688888765321 1100 11111 111 1222221 2
Q ss_pred HHHHHHhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcC-CC-EEEEEc
Q 043385 151 LEKSLENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCG-AS-HFVLLS 206 (405)
Q Consensus 151 l~~~~~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~-v~-~~V~~S 206 (405)
..+++++ +|+||-+||.... ...+.++.|..-.+.+.+++.+.. -. .++.+|
T Consensus 94 ~~~a~~~----advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs 150 (345)
T 4h7p_A 94 PRVAFDG----VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG 150 (345)
T ss_dssp HHHHTTT----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred hHHHhCC----CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence 3567787 9999999987532 345688999999999999987753 22 445455
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00048 Score=64.29 Aligned_cols=113 Identities=16% Similarity=0.128 Sum_probs=74.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++++|.|+|+ |.+|..++..|+..|. +|+++++++++..+....+..... .....+...+ |. +++++
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~----~a~~~-- 73 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY----KDLEN-- 73 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG----GGGTT--
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH----HHHCC--
Confidence 34579999996 9999999999999987 999999988764322111111110 0123333211 22 35666
Q ss_pred CCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 160 TSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.++|.... ...+.+..|....+.+++.+.+...+ .+|.+|
T Consensus 74 --aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 122 (321)
T 3p7m_A 74 --SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT 122 (321)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 9999999886532 23346778999999999998887654 555554
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00043 Score=65.23 Aligned_cols=93 Identities=27% Similarity=0.394 Sum_probs=57.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEe-cCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF---NVIAIA-REKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~l~-r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+++|+|.||||.+|+.+++.|.++++ +|+++. ++.... .+. ..+..+...|+ |++. +++
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~--------~~~-~~g~~i~~~~~-~~~~----~~~--- 68 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ--------RMG-FAESSLRVGDV-DSFD----FSS--- 68 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC--------EEE-ETTEEEECEEG-GGCC----GGG---
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC--------ccc-cCCcceEEecC-CHHH----hcC---
Confidence 46899999999999999999997654 455554 222110 000 11222211222 1221 456
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+||.+.+. ..+..+++.+.++|++ +|-+|+..
T Consensus 69 -~DvV~~a~g~-------------~~s~~~a~~~~~aG~k-vId~Sa~~ 102 (340)
T 2hjs_A 69 -VGLAFFAAAA-------------EVSRAHAERARAAGCS-VIDLSGAL 102 (340)
T ss_dssp -CSEEEECSCH-------------HHHHHHHHHHHHTTCE-EEETTCTT
T ss_pred -CCEEEEcCCc-------------HHHHHHHHHHHHCCCE-EEEeCCCC
Confidence 9999998763 2355677788888885 77777765
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00057 Score=63.98 Aligned_cols=112 Identities=11% Similarity=0.127 Sum_probs=75.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhccC-CcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQLQ-GASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~-~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
..++|.|+|+ |.+|..++..|+.+|. +|+++++++++..+....+....... ....+.. .|.+ .+++
T Consensus 18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----~~~~--- 87 (331)
T 4aj2_A 18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----VTAN--- 87 (331)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----GGTT---
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----HhCC---
Confidence 4579999998 9999999999999986 89999997654432222122211111 2223322 1332 3566
Q ss_pred CccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 161 SIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.++|... ....+.++.|..-.+.+.+.+.+...+ .++.+|
T Consensus 88 -aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt 136 (331)
T 4aj2_A 88 -SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS 136 (331)
T ss_dssp -EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred -CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999999998653 234568899999999999999887644 555555
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0003 Score=66.17 Aligned_cols=103 Identities=18% Similarity=0.244 Sum_probs=65.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~ 161 (405)
..+.+|||+||+|.+|...++.+...|++|+++++++++. +..... +...+ .|..+.+..+...+... .+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-------~~~~~~-ga~~~-~~~~~~~~~~~~~~~~~~~g 217 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKL-------KIAKEY-GAEYL-INASKEDILRQVLKFTNGKG 217 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHT-TCSEE-EETTTSCHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHc-CCcEE-EeCCCchHHHHHHHHhCCCC
Confidence 3568999999999999999999999999999999977653 222222 22221 34444332222222111 35
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+||+|+|.. .....++.++.. +++|.++...
T Consensus 218 ~D~vid~~g~~-------------~~~~~~~~l~~~--G~iv~~G~~~ 250 (334)
T 3qwb_A 218 VDASFDSVGKD-------------TFEISLAALKRK--GVFVSFGNAS 250 (334)
T ss_dssp EEEEEECCGGG-------------GHHHHHHHEEEE--EEEEECCCTT
T ss_pred ceEEEECCChH-------------HHHHHHHHhccC--CEEEEEcCCC
Confidence 99999998841 122344444443 4888887654
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00022 Score=65.57 Aligned_cols=110 Identities=7% Similarity=0.000 Sum_probs=73.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhc-cC-CcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQ-LQ-GASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~-~~-~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
|||.|+|| |+||+.++-.|+.++ .++.+++.++....+....+.+... .+ ...+...+ |.+ .+++
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~----~~~~---- 69 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS----LLKG---- 69 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG----GGTT----
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH----HhCC----
Confidence 68999996 999999999998887 4799999876544322222222111 11 23333321 222 3556
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEE-EEEc
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHF-VLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~-V~~S 206 (405)
.|+||-.||.... ...+.++.|..-.+.+.+.+.+.+.+-+ +.+|
T Consensus 70 aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs 118 (294)
T 2x0j_A 70 SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 9999999996532 4456889999999999999998876544 4444
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00074 Score=63.03 Aligned_cols=111 Identities=13% Similarity=0.094 Sum_probs=68.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+++||.|+|+ |.+|..++..|+..|. +|+++++++++..+....+.... ....+++.. .+ .+++++
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~--- 74 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKD--- 74 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTT---
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCC---
Confidence 3478999998 9999999999999986 89999998766542111111100 011232222 22 234666
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
+|+||.+++.... ...+....|+...+.+++.+.+.+.+-+|.+.
T Consensus 75 -aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~ 122 (318)
T 1y6j_A 75 -CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV 122 (318)
T ss_dssp -CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred -CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence 9999999886432 22345678888889999998886554444443
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00044 Score=64.31 Aligned_cols=110 Identities=13% Similarity=0.142 Sum_probs=73.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
|+|.|+|+ |.+|..++..|+..|. +|+++++++++..+....+..... .....+...| +. +++++
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~----~a~~~---- 69 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY----GPTED---- 69 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS----GGGTT----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH----HHhCC----
Confidence 68999997 9999999999999886 899999988664322111111111 1133443222 22 34566
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.++|.... ...+.++.|..-.+.+.+.+.+.+.+ .++.+|
T Consensus 70 aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 118 (314)
T 3nep_X 70 SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA 118 (314)
T ss_dssp CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 9999999886532 34467888999999999999887644 455444
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00085 Score=61.96 Aligned_cols=73 Identities=22% Similarity=0.326 Sum_probs=47.8
Q ss_pred CCCCe-EEEE-cCC-----------------ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHh---hh-------
Q 043385 83 PKDIN-ILVV-GST-----------------GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEET---LN------- 133 (405)
Q Consensus 83 ~~~~~-vlVt-Gat-----------------G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~---~~------- 133 (405)
..+++ |||| |+| |..|.+++++++++|++|+.+.+... .....+.... +.
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~~~~~~~~~~~~~ 112 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPPQTWLSALRPSGP 112 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCHHHHHHHCEECCC
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCccchhhhhccccc
Confidence 45677 9999 777 99999999999999999999999654 2111000000 00
Q ss_pred ccCCcEEEEcCCCCHHHHHHHHH
Q 043385 134 QLQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 134 ~~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
...++..+..|+...+.+.+++.
T Consensus 113 ~~~~~~~i~v~v~sa~~m~~av~ 135 (313)
T 1p9o_A 113 ALSGLLSLEAEENALPGFAEALR 135 (313)
T ss_dssp -CCSEEEEEEETTTSTTHHHHHH
T ss_pred cccccceeeeccccHHHHHHHHH
Confidence 11345567777776666665553
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00062 Score=63.49 Aligned_cols=111 Identities=14% Similarity=0.138 Sum_probs=72.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHh-hhcc-CCcEEEEcCCCCHHHHHHHHHhh
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEET-LNQL-QGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~-~~~~-~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
+++++|.|+|| |.+|..++..|+.+| .+|+++++++++..+....+.. .... ..+++.. | + .+++++
T Consensus 4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~- 74 (317)
T 3d0o_A 4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHD- 74 (317)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTT-
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCC-
Confidence 34579999999 999999999999888 4899999876544321111111 1111 2334333 2 2 334666
Q ss_pred CCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEE
Q 043385 159 GTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~ 205 (405)
+|+||.+++.... ...+....|..-.+.+++.+.+...+-+|.+
T Consensus 75 ---aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv 121 (317)
T 3d0o_A 75 ---ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLV 121 (317)
T ss_dssp ---CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred ---CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 9999999886532 1224567788888889988888765444434
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00017 Score=67.54 Aligned_cols=104 Identities=16% Similarity=0.089 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~ 161 (405)
..+++|||+||+|.+|...++.+...|++|+++++++++. +..... +... ..|..+.+..+.+.+... .+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-------~~~~~~-Ga~~-~~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKA-------AHAKAL-GAWE-TIDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-------HHHHHH-TCSE-EEETTTSCHHHHHHHHTTTCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHc-CCCE-EEeCCCccHHHHHHHHhCCCC
Confidence 3568999999999999999999999999999999987653 222222 2221 134544433333222111 35
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+|+||+|+|.. .....++.++.. +++|.++....
T Consensus 210 ~Dvvid~~g~~-------------~~~~~~~~l~~~--G~iv~~g~~~~ 243 (325)
T 3jyn_A 210 CPVVYDGVGQD-------------TWLTSLDSVAPR--GLVVSFGNASG 243 (325)
T ss_dssp EEEEEESSCGG-------------GHHHHHTTEEEE--EEEEECCCTTC
T ss_pred ceEEEECCChH-------------HHHHHHHHhcCC--CEEEEEecCCC
Confidence 99999998841 112233333333 48888876543
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00018 Score=68.44 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=54.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+++|+|+|+ |.+|+.+++.|...|++|++++|++++.... ..... ..+..+ ..+.+.+.+.+.+ +
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~----~~~~~-~~~~~~---~~~~~~~~~~~~~----~ 231 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYL----ETLFG-SRVELL---YSNSAEIETAVAE----A 231 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHHG-GGSEEE---ECCHHHHHHHHHT----C
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH----HHhhC-ceeEee---eCCHHHHHHHHcC----C
Confidence 45589999999 9999999999999999999999987654210 11111 112222 2345667777877 9
Q ss_pred cEEEEccccc
Q 043385 163 DVVVSCLASR 172 (405)
Q Consensus 163 d~Vv~~a~~~ 172 (405)
|+||++++..
T Consensus 232 DvVI~~~~~~ 241 (361)
T 1pjc_A 232 DLLIGAVLVP 241 (361)
T ss_dssp SEEEECCCCT
T ss_pred CEEEECCCcC
Confidence 9999988753
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00031 Score=65.04 Aligned_cols=74 Identities=20% Similarity=0.298 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+.+|||+||+|.+|..+++.+...|++|+++++++++. +..... +...+ .|..+.+++.+.+.+ +|
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~-------~~~~~~-ga~~~-~~~~~~~~~~~~~~~----~d 191 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL-------ALPLAL-GAEEA-ATYAEVPERAKAWGG----LD 191 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS-------HHHHHT-TCSEE-EEGGGHHHHHHHTTS----EE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHhc-CCCEE-EECCcchhHHHHhcC----ce
Confidence 468999999999999999999999999999999987654 222222 33222 355441334444444 99
Q ss_pred EEEEcccc
Q 043385 164 VVVSCLAS 171 (405)
Q Consensus 164 ~Vv~~a~~ 171 (405)
+||+ +|.
T Consensus 192 ~vid-~g~ 198 (302)
T 1iz0_A 192 LVLE-VRG 198 (302)
T ss_dssp EEEE-CSC
T ss_pred EEEE-CCH
Confidence 9999 874
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0005 Score=67.62 Aligned_cols=40 Identities=20% Similarity=0.379 Sum_probs=34.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
..+.+|||+||+|.+|...++.+...|++|+++++++++.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~ 266 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 266 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence 3567999999999999999999999999999999876543
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0004 Score=64.17 Aligned_cols=76 Identities=17% Similarity=0.175 Sum_probs=53.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCC-cEEEEcCCCCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQG-ASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~-v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+..+++|+|+|+ |.+|+.++..|++.|+ +|++++|+.++.. ........ .. ++.+.+++.+.+.+
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~------~la~~~~~~~~----~~~~~~~~~~~~~~-- 204 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAE------RLVREGDERRS----AYFSLAEAETRLAE-- 204 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHH------HHHHHSCSSSC----CEECHHHHHHTGGG--
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH------HHHHHhhhccC----ceeeHHHHHhhhcc--
Confidence 456889999998 8899999999999997 9999999876542 11111111 00 12233556666776
Q ss_pred CCccEEEEccccc
Q 043385 160 TSIDVVVSCLASR 172 (405)
Q Consensus 160 ~~~d~Vv~~a~~~ 172 (405)
+|+||++.+..
T Consensus 205 --aDivIn~t~~~ 215 (297)
T 2egg_A 205 --YDIIINTTSVG 215 (297)
T ss_dssp --CSEEEECSCTT
T ss_pred --CCEEEECCCCC
Confidence 99999998754
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00034 Score=66.19 Aligned_cols=101 Identities=18% Similarity=0.215 Sum_probs=64.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--C
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--T 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--~ 160 (405)
.+.+|||+|| |.+|...++.+...|+ +|+++++++++. +..... +...+ .|..+.+ +.+.+.... .
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-------~~~~~~-Ga~~~-~~~~~~~-~~~~v~~~~~g~ 235 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRR-------ELAKKV-GADYV-INPFEED-VVKEVMDITDGN 235 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH-------HHHHHH-TCSEE-ECTTTSC-HHHHHHHHTTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-------HHHHHh-CCCEE-ECCCCcC-HHHHHHHHcCCC
Confidence 6789999999 9999999999999998 999999986543 222222 23222 3554433 222222111 2
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
++|+||+++|.. ......++.++.. +++|.+++..
T Consensus 236 g~D~vid~~g~~------------~~~~~~~~~l~~~--G~iv~~g~~~ 270 (348)
T 2d8a_A 236 GVDVFLEFSGAP------------KALEQGLQAVTPA--GRVSLLGLYP 270 (348)
T ss_dssp CEEEEEECSCCH------------HHHHHHHHHEEEE--EEEEECCCCS
T ss_pred CCCEEEECCCCH------------HHHHHHHHHHhcC--CEEEEEccCC
Confidence 599999998741 1233445555443 4899888654
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00065 Score=63.20 Aligned_cols=112 Identities=14% Similarity=0.156 Sum_probs=72.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC--CCcCCCCchhHhhhc-c-CCcEEEEcCCCCHHHHHHHHHhh
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREK--SGIRGRNDKEETLNQ-L-QGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~--~~~~~~~~~~~~~~~-~-~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
+.++|.|+|+ |.+|..++..|+..|+ +|+++++++ ....+....+..... . ....+...+ |. +++++
T Consensus 7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d~----~a~~~- 78 (315)
T 3tl2_A 7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--DY----ADTAD- 78 (315)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--CG----GGGTT-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--CH----HHhCC-
Confidence 4578999997 9999999999999999 999999983 332211111111100 0 122222211 22 34566
Q ss_pred CCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 159 GTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.++|.... ...+.++.|..-.+.+++.+.+.+.+ .++.+|
T Consensus 79 ---aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs 127 (315)
T 3tl2_A 79 ---SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT 127 (315)
T ss_dssp ---CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred ---CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence 9999999886532 23457788999999999998887654 455555
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.22 E-value=6.9e-05 Score=61.37 Aligned_cols=71 Identities=17% Similarity=0.311 Sum_probs=50.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+++|+|+|+ |.+|+.+++.|.+.|++|++.+|++++.. ...... ++... +. +++.+++++ +|+
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~------~~a~~~-~~~~~--~~---~~~~~~~~~----~Di 83 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVR------AFAEKY-EYEYV--LI---NDIDSLIKN----NDV 83 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHH------HHHHHH-TCEEE--EC---SCHHHHHHT----CSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHH------HHHHHh-CCceE--ee---cCHHHHhcC----CCE
Confidence 689999997 99999999999999999999999876532 111111 22322 22 235566777 999
Q ss_pred EEEccccc
Q 043385 165 VVSCLASR 172 (405)
Q Consensus 165 Vv~~a~~~ 172 (405)
||.+.+..
T Consensus 84 vi~at~~~ 91 (144)
T 3oj0_A 84 IITATSSK 91 (144)
T ss_dssp EEECSCCS
T ss_pred EEEeCCCC
Confidence 99987754
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00069 Score=64.25 Aligned_cols=100 Identities=22% Similarity=0.390 Sum_probs=60.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
++++|.|.||+|.+|+.+++.|.++. .+|+++.+..+... +.........+.. ..|+.-.+ .+.+++ +
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~---~~~~~~~~~~~~v--~~dl~~~~--~~~~~~----v 83 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQ---SMESVFPHLRAQK--LPTLVSVK--DADFST----V 83 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTS---CHHHHCGGGTTSC--CCCCBCGG--GCCGGG----C
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCC---CHHHhCchhcCcc--cccceecc--hhHhcC----C
Confidence 34689999999999999999999886 47888776432211 1111111112211 13433222 233456 9
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
|+||.|++... +...+..+ ++|+ ++|-.|+..
T Consensus 84 DvVf~atp~~~-------------s~~~a~~~-~aG~-~VId~sa~~ 115 (359)
T 1xyg_A 84 DAVFCCLPHGT-------------TQEIIKEL-PTAL-KIVDLSADF 115 (359)
T ss_dssp SEEEECCCTTT-------------HHHHHHTS-CTTC-EEEECSSTT
T ss_pred CEEEEcCCchh-------------HHHHHHHH-hCCC-EEEECCccc
Confidence 99999886432 34556666 7776 577778754
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00046 Score=66.02 Aligned_cols=78 Identities=14% Similarity=0.219 Sum_probs=56.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
...+++|+|+|+ |.||+.+++.+...|++|++++|++++. +.....-+..+ ..+..+.+++.+.+.+
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l-------~~~~~~~g~~~-~~~~~~~~~l~~~l~~---- 231 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKL-------RQLDAEFCGRI-HTRYSSAYELEGAVKR---- 231 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHHTTTSS-EEEECCHHHHHHHHHH----
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH-------HHHHHhcCCee-EeccCCHHHHHHHHcC----
Confidence 356789999999 9999999999999999999999987543 11111011111 1233456678888888
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
+|+||++++..
T Consensus 232 aDvVi~~~~~p 242 (377)
T 2vhw_A 232 ADLVIGAVLVP 242 (377)
T ss_dssp CSEEEECCCCT
T ss_pred CCEEEECCCcC
Confidence 99999988743
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00079 Score=63.51 Aligned_cols=98 Identities=20% Similarity=0.184 Sum_probs=60.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
+++|.|.||||.+|+.+++.|.+++ .+|+++.+......... .....+.+.. ..++.+.+ + +++ +|
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~---~~~~~~~g~~--~~~~~~~~---~-~~~----vD 70 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVH---FVHPNLRGRT--NLKFVPPE---K-LEP----AD 70 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGG---GTCGGGTTTC--CCBCBCGG---G-CCC----CS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhH---HhCchhcCcc--cccccchh---H-hcC----CC
Confidence 4789999999999999999999876 48887776433211000 1111111110 01122322 2 345 99
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+||.+++.. ....+++.+.++|+ ++|-+|+..
T Consensus 71 vV~~a~g~~-------------~s~~~a~~~~~aG~-~VId~Sa~~ 102 (345)
T 2ozp_A 71 ILVLALPHG-------------VFAREFDRYSALAP-VLVDLSADF 102 (345)
T ss_dssp EEEECCCTT-------------HHHHTHHHHHTTCS-EEEECSSTT
T ss_pred EEEEcCCcH-------------HHHHHHHHHHHCCC-EEEEcCccc
Confidence 999987643 24556667778887 588888754
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00029 Score=67.17 Aligned_cols=95 Identities=16% Similarity=0.193 Sum_probs=62.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC---CCcCCCCchhHhhhccCCcEEEEcCCCC--HHHHHHHHHhhC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK---SGIRGRNDKEETLNQLQGASVCFSDVTN--LESLEKSLENLG 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~---~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~l~~~~~~~~ 159 (405)
+++|||+|| |.+|..+++.+...|++|+++++++ ++. +..... +...+ | .+ .+.+.+ ..
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-------~~~~~~-ga~~v--~-~~~~~~~~~~-~~--- 244 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-------TVIEET-KTNYY--N-SSNGYDKLKD-SV--- 244 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-------HHHHHH-TCEEE--E-CTTCSHHHHH-HH---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-------HHHHHh-CCcee--c-hHHHHHHHHH-hC---
Confidence 789999999 9999999999999999999999987 432 222222 44444 5 44 223333 21
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHH-HHHHHHHHhcCCCEEEEEcccc
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEAN-RNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~-~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+++|+||+++|... .. ...++.++.. +++|.++...
T Consensus 245 ~~~d~vid~~g~~~------------~~~~~~~~~l~~~--G~iv~~g~~~ 281 (366)
T 2cdc_A 245 GKFDVIIDATGADV------------NILGNVIPLLGRN--GVLGLFGFST 281 (366)
T ss_dssp CCEEEEEECCCCCT------------HHHHHHGGGEEEE--EEEEECSCCC
T ss_pred CCCCEEEECCCChH------------HHHHHHHHHHhcC--CEEEEEecCC
Confidence 35999999988532 11 2233333332 4888887654
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0022 Score=60.59 Aligned_cols=99 Identities=21% Similarity=0.280 Sum_probs=63.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC----HHHHHHHHH--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN----LESLEKSLE-- 156 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d----~~~l~~~~~-- 156 (405)
..+.+|||+|+ |.+|...++.+...|++|+++++++++. +....+ +...+ .|..+ .+.+.+...
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-------~~~~~l-Ga~~~-~~~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRL-------EVAKNC-GADVT-LVVDPAKEEESSIIERIRSA 236 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHT-TCSEE-EECCTTTSCHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHH-------HHHHHh-CCCEE-EcCcccccHHHHHHHHhccc
Confidence 35679999997 9999999998888999999999877653 222222 33221 24432 344555544
Q ss_pred -hhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 157 -NLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 157 -~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
+ .++|+||+++|.. ......++.++.. +++|.++.
T Consensus 237 ~g--~g~D~vid~~g~~------------~~~~~~~~~l~~~--G~iv~~G~ 272 (352)
T 1e3j_A 237 IG--DLPNVTIDCSGNE------------KCITIGINITRTG--GTLMLVGM 272 (352)
T ss_dssp SS--SCCSEEEECSCCH------------HHHHHHHHHSCTT--CEEEECSC
T ss_pred cC--CCCCEEEECCCCH------------HHHHHHHHHHhcC--CEEEEEec
Confidence 2 2599999998742 1223344444433 48988775
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0017 Score=63.80 Aligned_cols=99 Identities=20% Similarity=0.351 Sum_probs=73.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~ 162 (405)
.-++|+|.|| |.+|.++++.|. ++++|.++.+++++.. .....+++..++.||-+|++-|.++ ++. +
T Consensus 234 ~~~~v~I~Gg-G~ig~~lA~~L~-~~~~v~iIE~d~~r~~------~la~~l~~~~Vi~GD~td~~~L~ee~i~~----~ 301 (461)
T 4g65_A 234 PYRRIMIVGG-GNIGASLAKRLE-QTYSVKLIERNLQRAE------KLSEELENTIVFCGDAADQELLTEENIDQ----V 301 (461)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHH------HHHHHCTTSEEEESCTTCHHHHHHTTGGG----C
T ss_pred cccEEEEEcc-hHHHHHHHHHhh-hcCceEEEecCHHHHH------HHHHHCCCceEEeccccchhhHhhcCchh----h
Confidence 3468999998 999999999874 5699999999877653 3334457899999999999988765 444 9
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
|++|-+.+.- +.|+... -.|++.|+++.|-.-
T Consensus 302 D~~ia~T~~D--------e~Ni~~~----llAk~~gv~kvIa~v 333 (461)
T 4g65_A 302 DVFIALTNED--------ETNIMSA----MLAKRMGAKKVMVLI 333 (461)
T ss_dssp SEEEECCSCH--------HHHHHHH----HHHHHTTCSEEEEEC
T ss_pred cEEEEcccCc--------HHHHHHH----HHHHHcCCccccccc
Confidence 9999654421 3566543 346788999887543
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00069 Score=65.90 Aligned_cols=91 Identities=19% Similarity=0.319 Sum_probs=60.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-C---eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH---HHHHHHHHhh
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG-F---NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL---ESLEKSLENL 158 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g-~---~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~l~~~~~~~ 158 (405)
++|+|.|+ |.||+.+++.|++++ + +|++.+...... +.... .++++...++++. +.+.+++++
T Consensus 14 ~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-------~~~~~-~g~~~~~~~Vdadnv~~~l~aLl~~- 83 (480)
T 2ph5_A 14 NRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-------DVAQQ-YGVSFKLQQITPQNYLEVIGSTLEE- 83 (480)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-------CHHHH-HTCEEEECCCCTTTHHHHTGGGCCT-
T ss_pred CCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhh-------hHHhh-cCCceeEEeccchhHHHHHHHHhcC-
Confidence 67999995 999999999999874 4 688887665432 11111 1456666666543 234455554
Q ss_pred CCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEE
Q 043385 159 GTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V 203 (405)
.|+|||++-.. ....++++|.++|+ ++|
T Consensus 84 ---~DvVIN~s~~~-------------~~l~Im~acleaGv-~Yl 111 (480)
T 2ph5_A 84 ---NDFLIDVSIGI-------------SSLALIILCNQKGA-LYI 111 (480)
T ss_dssp ---TCEEEECCSSS-------------CHHHHHHHHHHHTC-EEE
T ss_pred ---CCEEEECCccc-------------cCHHHHHHHHHcCC-CEE
Confidence 59999854322 24468999999997 444
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00053 Score=60.15 Aligned_cols=67 Identities=19% Similarity=0.317 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+|+|.|+| +|.+|+.+++.|.+.|++|++++|++++. +.+.. .++... ++.+++++ +|
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~-------~~~~~-~g~~~~--------~~~~~~~~----~D 85 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRT-------ARLFP-SAAQVT--------FQEEAVSS----PE 85 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHH-------HHHSB-TTSEEE--------EHHHHTTS----CS
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHH-cCCcee--------cHHHHHhC----CC
Confidence 357899999 69999999999999999999999986543 22222 144432 24455666 99
Q ss_pred EEEEcccc
Q 043385 164 VVVSCLAS 171 (405)
Q Consensus 164 ~Vv~~a~~ 171 (405)
+||.+...
T Consensus 86 vVi~av~~ 93 (215)
T 2vns_A 86 VIFVAVFR 93 (215)
T ss_dssp EEEECSCG
T ss_pred EEEECCCh
Confidence 99987653
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00059 Score=64.44 Aligned_cols=77 Identities=21% Similarity=0.371 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+.+|||+||+|.+|...++.+...|++|+++++++++. +....+ +...+ .|..+ ++.+.+.... .++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-------~~~~~l-Ga~~v-i~~~~--~~~~~~~~~~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI-------EWTKKM-GADIV-LNHKE--SLLNQFKTQGIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH-------HHHHHH-TCSEE-ECTTS--CHHHHHHHHTCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHhc-CCcEE-EECCc--cHHHHHHHhCCCCc
Confidence 578999999999999999999999999999999976543 222222 22222 23333 1222222211 369
Q ss_pred cEEEEcccc
Q 043385 163 DVVVSCLAS 171 (405)
Q Consensus 163 d~Vv~~a~~ 171 (405)
|+||+|+|.
T Consensus 219 Dvv~d~~g~ 227 (346)
T 3fbg_A 219 DYVFCTFNT 227 (346)
T ss_dssp EEEEESSCH
T ss_pred cEEEECCCc
Confidence 999998873
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0014 Score=60.99 Aligned_cols=110 Identities=16% Similarity=0.256 Sum_probs=69.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhc-c-CCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQ-L-QGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~-~-~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+.++|.|+|+ |.+|..++..|+..|. +|++++++++...+....+..... . ..+++.. | +. +++++
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~----~al~~-- 74 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY----DDCRD-- 74 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG----GGTTT--
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH----HHhCC--
Confidence 4579999999 9999999999988773 899999987543221111111111 1 1344442 2 22 34666
Q ss_pred CCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEE
Q 043385 160 TSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLL 205 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~ 205 (405)
+|+||.+++.... ...+....|..-.+.+++.+.+...+ .++.+
T Consensus 75 --aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~ 122 (316)
T 1ldn_A 75 --ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVA 122 (316)
T ss_dssp --CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred --CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEe
Confidence 9999998876431 23345677888888888888876544 34433
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0011 Score=61.83 Aligned_cols=110 Identities=13% Similarity=0.157 Sum_probs=70.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++||.|+|| |.+|..++..|+..+. +|+++++++++..+....+... .....+++.. | + .+++++
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~---- 72 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKD---- 72 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTT----
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCC----
Confidence 379999999 9999999999998875 8999999765543211111111 1112444443 2 2 234666
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||..++.... ...+....|....+.+++.+.+.+.+ .+|.+|
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 121 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 9999998886432 23356778999999999999888654 455443
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0011 Score=63.02 Aligned_cols=98 Identities=17% Similarity=0.172 Sum_probs=66.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.+.+|||+|+ |.||...++.+...|++|+++++++++. +... .+ +...+ .|..+.+.+.+... ++
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~-------~~~~~~l-Ga~~v-~~~~~~~~~~~~~~----~~ 252 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKK-------EEALKNF-GADSF-LVSRDQEQMQAAAG----TL 252 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGH-------HHHHHTS-CCSEE-EETTCHHHHHHTTT----CE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHhc-CCceE-EeccCHHHHHHhhC----CC
Confidence 5789999996 9999999999999999999999987653 2222 22 33222 36667666655544 49
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
|+||+++|... .....++.++.. +++|.+++..
T Consensus 253 D~vid~~g~~~------------~~~~~~~~l~~~--G~iv~~g~~~ 285 (366)
T 1yqd_A 253 DGIIDTVSAVH------------PLLPLFGLLKSH--GKLILVGAPE 285 (366)
T ss_dssp EEEEECCSSCC------------CSHHHHHHEEEE--EEEEECCCCS
T ss_pred CEEEECCCcHH------------HHHHHHHHHhcC--CEEEEEccCC
Confidence 99999988531 012344444443 4899888654
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0009 Score=63.10 Aligned_cols=99 Identities=20% Similarity=0.253 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH-HHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL-ESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~~~~~~~~~ 162 (405)
.+.+|||+||+|.+|...++.+...|++|+++ +++++. +..... +...+. +-.+. +.+.+...+ .++
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~-------~~~~~l-Ga~~i~-~~~~~~~~~~~~~~~--~g~ 217 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL-------EYVRDL-GATPID-ASREPEDYAAEHTAG--QGF 217 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH-------HHHHHH-TSEEEE-TTSCHHHHHHHHHTT--SCE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH-------HHHHHc-CCCEec-cCCCHHHHHHHHhcC--CCc
Confidence 46799999999999999999999999999988 665442 222222 344432 22222 223333332 359
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
|+||+++|.. .....++.++.. +++|.++...
T Consensus 218 D~vid~~g~~-------------~~~~~~~~l~~~--G~iv~~g~~~ 249 (343)
T 3gaz_A 218 DLVYDTLGGP-------------VLDASFSAVKRF--GHVVSCLGWG 249 (343)
T ss_dssp EEEEESSCTH-------------HHHHHHHHEEEE--EEEEESCCCS
T ss_pred eEEEECCCcH-------------HHHHHHHHHhcC--CeEEEEcccC
Confidence 9999998731 123344444433 4788776544
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0032 Score=59.79 Aligned_cols=94 Identities=18% Similarity=0.367 Sum_probs=56.5
Q ss_pred CeEEEEcCCChhHHHHHHH-HHhCCC---eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEE-LVSRGF---NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~-L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++|.|.||||.+|+.+++. |.++++ +|+.+..+.... ......+......|..|++.+ ++
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~--------~v~~~~g~~i~~~~~~~~~~~----~~---- 65 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ--------AAPSFGGTTGTLQDAFDLEAL----KA---- 65 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--------BCCGGGTCCCBCEETTCHHHH----HT----
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC--------CccccCCCceEEEecCChHHh----cC----
Confidence 6899999999999999995 444443 456665542111 011011122223345555543 46
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAI 208 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~ 208 (405)
+|+||.|+|. ..++.+...+.+.|++ .+|=.|+.
T Consensus 66 ~DvVf~a~g~-------------~~s~~~a~~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 66 LDIIVTCQGG-------------DYTNEIYPKLRESGWQGYWIDAASS 100 (367)
T ss_dssp CSEEEECSCH-------------HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred CCEEEECCCc-------------hhHHHHHHHHHHCCCCEEEEcCChh
Confidence 9999998762 3455677777888875 44444444
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0012 Score=62.59 Aligned_cols=95 Identities=16% Similarity=0.220 Sum_probs=62.9
Q ss_pred CeEEEEcCCChhHHHH-HHHH-HhCCCe-EEEEecCCC---CcCCCCchhHhhhccCCcEEEEcCCCCHH--HHHHHHHh
Q 043385 86 INILVVGSTGYIGKFV-VEEL-VSRGFN-VIAIAREKS---GIRGRNDKEETLNQLQGASVCFSDVTNLE--SLEKSLEN 157 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l-~~~L-~~~g~~-V~~l~r~~~---~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~--~l~~~~~~ 157 (405)
.+|||+|| |.+|... ++.+ ...|.+ |++++++++ +. +....+ +...+ |..+.+ .+.+. .
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~-------~~~~~l-Ga~~v--~~~~~~~~~i~~~-~- 240 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI-------DIIEEL-DATYV--DSRQTPVEDVPDV-Y- 240 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH-------HHHHHT-TCEEE--ETTTSCGGGHHHH-S-
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH-------HHHHHc-CCccc--CCCccCHHHHHHh-C-
Confidence 79999999 9999999 8877 677987 999999876 43 223333 55555 665432 23333 2
Q ss_pred hCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 158 LGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 158 ~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+++|+||+++|.. ......++.++.. +++|.++...
T Consensus 241 --gg~Dvvid~~g~~------------~~~~~~~~~l~~~--G~iv~~g~~~ 276 (357)
T 2b5w_A 241 --EQMDFIYEATGFP------------KHAIQSVQALAPN--GVGALLGVPS 276 (357)
T ss_dssp --CCEEEEEECSCCH------------HHHHHHHHHEEEE--EEEEECCCCC
T ss_pred --CCCCEEEECCCCh------------HHHHHHHHHHhcC--CEEEEEeCCC
Confidence 2599999998742 1223344444443 4888887654
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00082 Score=61.29 Aligned_cols=71 Identities=21% Similarity=0.281 Sum_probs=51.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+..+++|+|+|+ |.+|++++..|.+.|+ +|+++.|+.++..... . ++..+ ..+++.+++++
T Consensus 114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la-------~--~~~~~-----~~~~~~~~~~~--- 175 (277)
T 3don_A 114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS-------L--NINKI-----NLSHAESHLDE--- 175 (277)
T ss_dssp TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC-------S--CCEEE-----CHHHHHHTGGG---
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-------H--hcccc-----cHhhHHHHhcC---
Confidence 456789999998 8999999999999998 8999999987653211 1 22221 24456666666
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
+|+||++.+.
T Consensus 176 -aDiVInaTp~ 185 (277)
T 3don_A 176 -FDIIINTTPA 185 (277)
T ss_dssp -CSEEEECCC-
T ss_pred -CCEEEECccC
Confidence 9999997653
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0013 Score=61.50 Aligned_cols=111 Identities=13% Similarity=0.135 Sum_probs=72.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+++||.|+|| |.+|..++..|+..+. +|+++++++++..+....+... .....+++.. | + .+++++
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~--- 76 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKD--- 76 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGG---
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCC---
Confidence 4579999999 9999999999988874 8999999765543211111111 1112444443 2 2 334677
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||..++.... ...+....|+...+.+++.+.+.+.+ .+|.+|
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 125 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 9999998886432 22346677888888999888887644 455443
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0026 Score=59.55 Aligned_cols=102 Identities=20% Similarity=0.216 Sum_probs=60.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccC---CcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQ---GASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~---~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
|++|.|.||||++|+.+++.|.++ .+++..+..+......-....+....+. ...+... .|.+.+ +++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~~~---~~~--- 75 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDISEF---SPG--- 75 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGGGT---CTT---
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHHHH---hcC---
Confidence 478999999999999999999985 4688877655411000011111111111 2222222 022222 145
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+||.|.+. ..++.+++.+.+.|+ ++|=+|+..
T Consensus 76 -~Dvvf~a~p~-------------~~s~~~~~~~~~~g~-~vIDlSa~f 109 (337)
T 3dr3_A 76 -VDVVFLATAH-------------EVSHDLAPQFLEAGC-VVFDLSGAF 109 (337)
T ss_dssp -CSEEEECSCH-------------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred -CCEEEECCCh-------------HHHHHHHHHHHHCCC-EEEEcCCcc
Confidence 9999987662 234566677777887 577777764
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0015 Score=61.61 Aligned_cols=99 Identities=13% Similarity=0.193 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh-CCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL-GTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~~ 161 (405)
.+.+|||+|| |.+|...++.+...|+ +|+++++++++.. ....+ .-.+ .|..+.+ +.+.+... ..+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~-------~~~~l-a~~v--~~~~~~~-~~~~~~~~~~~g 231 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA-------FARPY-ADRL--VNPLEED-LLEVVRRVTGSG 231 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG-------GGTTT-CSEE--ECTTTSC-HHHHHHHHHSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-------HHHHh-HHhc--cCcCccC-HHHHHHHhcCCC
Confidence 6789999999 9999999999988998 9999998865432 12222 1112 3554422 22222210 135
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+|+||+++|.. ......++.++.. +++|.++..
T Consensus 232 ~D~vid~~g~~------------~~~~~~~~~l~~~--G~iv~~g~~ 264 (343)
T 2dq4_A 232 VEVLLEFSGNE------------AAIHQGLMALIPG--GEARILGIP 264 (343)
T ss_dssp EEEEEECSCCH------------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred CCEEEECCCCH------------HHHHHHHHHHhcC--CEEEEEecC
Confidence 99999998741 1233445555544 388888764
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0028 Score=60.61 Aligned_cols=102 Identities=19% Similarity=0.249 Sum_probs=64.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCC--CHHHHHHHHHhhC-
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT--NLESLEKSLENLG- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--d~~~l~~~~~~~~- 159 (405)
.+.+|||+| +|.+|...++.+...| .+|+++++++++. +.+..+ +...+ .|.. +.+++.+.+....
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-------~~~~~l-Ga~~v-i~~~~~~~~~~~~~v~~~~~ 264 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRL-------KLAEEI-GADLT-LNRRETSVEERRKAIMDITH 264 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHH-------HHHHHT-TCSEE-EETTTSCHHHHHHHHHHHTT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHH-------HHHHHc-CCcEE-EeccccCcchHHHHHHHHhC
Confidence 467999999 7999999999998899 6999999887653 223333 33222 2443 2334444443221
Q ss_pred -CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 160 -TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
.++|+||+++|... .....++.++.. +++|.++...
T Consensus 265 g~g~Dvvid~~g~~~------------~~~~~~~~l~~~--G~iv~~G~~~ 301 (380)
T 1vj0_A 265 GRGADFILEATGDSR------------ALLEGSELLRRG--GFYSVAGVAV 301 (380)
T ss_dssp TSCEEEEEECSSCTT------------HHHHHHHHEEEE--EEEEECCCCS
T ss_pred CCCCcEEEECCCCHH------------HHHHHHHHHhcC--CEEEEEecCC
Confidence 25999999987421 123344444443 4888887654
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0014 Score=61.09 Aligned_cols=110 Identities=13% Similarity=0.046 Sum_probs=74.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhcc-CCcEEE-EcCCCCHHHHHHHHHhhCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQL-QGASVC-FSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~-~~Dl~d~~~l~~~~~~~~~ 160 (405)
.++|.|+|+ |.+|..++..|+..|. +|+++++++++..+....+...... ....+. ..|+.+ +++
T Consensus 21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------~~d--- 89 (330)
T 3ldh_A 21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------SAG--- 89 (330)
T ss_dssp CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-------CSS---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-------hCC---
Confidence 479999999 9999999999999986 8999999776543221111111111 122333 335432 455
Q ss_pred CccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 161 SIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||-++|... ....+....|..-.+.+++.+.+.+.+ .++.+|
T Consensus 90 -aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt 138 (330)
T 3ldh_A 90 -SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP 138 (330)
T ss_dssp -CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred -CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence 999999988653 234567889999999999988887644 455554
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.002 Score=61.55 Aligned_cols=77 Identities=18% Similarity=0.304 Sum_probs=51.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+.+|||+||+|.||...++.+...|.+|+++++ +++. +....+ +...+ .|..+.+..++..+. .++
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~-------~~~~~l-Ga~~v-~~~~~~~~~~~~~~~--~g~ 249 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDAS-------ELVRKL-GADDV-IDYKSGSVEEQLKSL--KPF 249 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGH-------HHHHHT-TCSEE-EETTSSCHHHHHHTS--CCB
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHH-------HHHHHc-CCCEE-EECCchHHHHHHhhc--CCC
Confidence 35679999999999999999999999999988874 3332 222332 33322 255544333333221 359
Q ss_pred cEEEEcccc
Q 043385 163 DVVVSCLAS 171 (405)
Q Consensus 163 d~Vv~~a~~ 171 (405)
|+||+++|.
T Consensus 250 D~vid~~g~ 258 (375)
T 2vn8_A 250 DFILDNVGG 258 (375)
T ss_dssp SEEEESSCT
T ss_pred CEEEECCCC
Confidence 999999884
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0043 Score=58.84 Aligned_cols=106 Identities=10% Similarity=0.084 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
..+.+|||+|+ |.+|...++.+...|.+ |+++++++++.. ....+ .+.+.....|-.+.+++.+.+....
T Consensus 178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~----~a~~l--~~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLK----FAKEI--CPEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHH----HHHHH--CTTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH----HHHHh--chhcccccccccchHHHHHHHHHHhCC
Confidence 35679999998 99999999998889987 999988876542 11122 1233333444444555555554332
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
.++|+||+++|.. ......++.++.. +++|.++...
T Consensus 251 ~g~Dvvid~~g~~------------~~~~~~~~~l~~~--G~iv~~G~~~ 286 (363)
T 3m6i_A 251 IEPAVALECTGVE------------SSIAAAIWAVKFG--GKVFVIGVGK 286 (363)
T ss_dssp CCCSEEEECSCCH------------HHHHHHHHHSCTT--CEEEECCCCC
T ss_pred CCCCEEEECCCCh------------HHHHHHHHHhcCC--CEEEEEccCC
Confidence 3699999998742 1223344444433 5898887544
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0011 Score=61.50 Aligned_cols=105 Identities=17% Similarity=0.290 Sum_probs=65.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhc----cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQ----LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
|+|.|+|| |.+|..++..|+..|+ +|+++++++++..... ..+.. .....+... |. +++++
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~---~~l~~~~~~~~~~~i~~~---~~----~a~~~-- 67 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEA---EDIAHAAPVSHGTRVWHG---GH----SELAD-- 67 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHH---HHHTTSCCTTSCCEEEEE---CG----GGGTT--
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHH---HhhhhhhhhcCCeEEEEC---CH----HHhCC--
Confidence 58999999 9999999999999998 9999999875432110 11111 012333322 22 24566
Q ss_pred CCccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEE
Q 043385 160 TSIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLL 205 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~ 205 (405)
+|+||.+++... ....+....|+...+.+++.+.+...+ .+|.+
T Consensus 68 --aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~ 115 (304)
T 2v6b_A 68 --AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVT 115 (304)
T ss_dssp --CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEEC
T ss_pred --CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 999999886532 123456678888888888888876544 34433
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0002 Score=65.91 Aligned_cols=39 Identities=28% Similarity=0.312 Sum_probs=34.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
++++++|+|||++ .+|++++..|++.| +|++++|+.++.
T Consensus 125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~ 163 (287)
T 1nvt_A 125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKA 163 (287)
T ss_dssp CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHH
T ss_pred CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHH
Confidence 4577899999995 99999999999999 999999987543
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0022 Score=60.73 Aligned_cols=34 Identities=32% Similarity=0.534 Sum_probs=29.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-FNVIAIARE 118 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~ 118 (405)
+++|.|.||+|.+|+.+++.|.+++ .+|+++.++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s 42 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS 42 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 3689999999999999999998875 688888764
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0049 Score=58.34 Aligned_cols=94 Identities=17% Similarity=0.286 Sum_probs=55.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF---NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+++|.|.||||++|+.|++.|.++++ ++..+.-...... .+. ..+.....-++.. +. +++
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~-------~~~-~~~~~~~~~~~~~-~~----~~~---- 64 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGK-------SLK-FKDQDITIEETTE-TA----FEG---- 64 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTC-------EEE-ETTEEEEEEECCT-TT----TTT----
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCC-------cce-ecCCCceEeeCCH-HH----hcC----
Confidence 46899999999999999999888765 3444442211110 011 1122222222221 11 345
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+||.|++. ..++..+..+.+.|+ ++|=+|+..
T Consensus 65 ~Dvvf~a~~~-------------~~s~~~a~~~~~~G~-~vIDlSa~~ 98 (366)
T 3pwk_A 65 VDIALFSAGS-------------STSAKYAPYAVKAGV-VVVDNTSYF 98 (366)
T ss_dssp CSEEEECSCH-------------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred CCEEEECCCh-------------HhHHHHHHHHHHCCC-EEEEcCCcc
Confidence 9999988762 234556666677787 577777754
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0061 Score=58.16 Aligned_cols=70 Identities=14% Similarity=0.251 Sum_probs=55.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+.+++|+|.|+ |.+|+.+++.+.+.|++|++++.++.... ... .-+.+.+|..|.+.+.++++. +
T Consensus 10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~------~~~----ad~~~~~~~~d~~~l~~~~~~----~ 74 (377)
T 3orq_A 10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC------RYV----AHEFIQAKYDDEKALNQLGQK----C 74 (377)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT------GGG----SSEEEECCTTCHHHHHHHHHH----C
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh------hhh----CCEEEECCCCCHHHHHHHHHh----C
Confidence 45689999998 89999999999999999999988765321 111 125677999999999999988 8
Q ss_pred cEEEE
Q 043385 163 DVVVS 167 (405)
Q Consensus 163 d~Vv~ 167 (405)
|+|..
T Consensus 75 dvi~~ 79 (377)
T 3orq_A 75 DVITY 79 (377)
T ss_dssp SEEEE
T ss_pred Cccee
Confidence 98854
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0027 Score=59.66 Aligned_cols=94 Identities=17% Similarity=0.248 Sum_probs=58.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC---CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG---FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+++|.|.||||.+|+.+++.|.+++ .+|+++........ .+. ..+......|+. ++ .+++
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~-------~~~-~~~~~i~~~~~~-~~----~~~~---- 65 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGK-------TYR-FNGKTVRVQNVE-EF----DWSQ---- 65 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTC-------EEE-ETTEEEEEEEGG-GC----CGGG----
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCC-------cee-ecCceeEEecCC-hH----HhcC----
Confidence 4789999999999999999999873 46777663211100 000 112222222221 22 2346
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
+|+||.|.+.. .++..++.+.+.|+ ++|-.|+..
T Consensus 66 vDvVf~a~g~~-------------~s~~~a~~~~~~G~-~vId~s~~~ 99 (336)
T 2r00_A 66 VHIALFSAGGE-------------LSAKWAPIAAEAGV-VVIDNTSHF 99 (336)
T ss_dssp CSEEEECSCHH-------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred CCEEEECCCch-------------HHHHHHHHHHHcCC-EEEEcCCcc
Confidence 99999987632 35566777778887 577777764
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00035 Score=63.73 Aligned_cols=40 Identities=23% Similarity=0.240 Sum_probs=35.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
+.++++|+|+|+ |.+|++++..|++.|++|++++|+.++.
T Consensus 116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a 155 (272)
T 1p77_A 116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKT 155 (272)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 456789999998 8899999999999999999999997654
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0023 Score=60.76 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=63.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcE-EEEcCCCC-HHHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGAS-VCFSDVTN-LESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~-~~~~Dl~d-~~~l~~~~~~~~~~ 161 (405)
.+.+|||+| +|.+|...++.+...|++|+++++++++. +....+ +.. ++.-+-.| .+.+.+...+ .+
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-------~~~~~l-Ga~~vi~~~~~~~~~~v~~~~~g--~g 257 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKL-------DRAFAL-GADHGINRLEEDWVERVYALTGD--RG 257 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHH-TCSEEEETTTSCHHHHHHHHHTT--CC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhH-------HHHHHc-CCCEEEcCCcccHHHHHHHHhCC--CC
Confidence 467999999 79999999999999999999999887653 222222 222 22211112 1223333332 35
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+|+||+++|... ....++.++.. +++|.++....
T Consensus 258 ~D~vid~~g~~~-------------~~~~~~~l~~~--G~iv~~G~~~~ 291 (363)
T 3uog_A 258 ADHILEIAGGAG-------------LGQSLKAVAPD--GRISVIGVLEG 291 (363)
T ss_dssp EEEEEEETTSSC-------------HHHHHHHEEEE--EEEEEECCCSS
T ss_pred ceEEEECCChHH-------------HHHHHHHhhcC--CEEEEEecCCC
Confidence 999999988321 22344444443 48888876544
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0061 Score=57.90 Aligned_cols=95 Identities=15% Similarity=0.312 Sum_probs=56.7
Q ss_pred CCeEEEEcCCChhHHHHHH-HHHhCC---CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 85 DINILVVGSTGYIGKFVVE-ELVSRG---FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~-~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+++|.|.||||++|+.+++ .|.++. .++..++-+.... .+....+.....-|..+++. +++
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~--------~~~~~~~~~~~v~~~~~~~~----~~~--- 68 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGG--------KAPSFAKNETTLKDATSIDD----LKK--- 68 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTS--------BCCTTCCSCCBCEETTCHHH----HHT---
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCC--------CHHHcCCCceEEEeCCChhH----hcC---
Confidence 4799999999999999999 666655 3566654332111 01111111111123444433 456
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAI 208 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~ 208 (405)
+|+||.|++. ..++.++..+.+.|++ ++|=.|+.
T Consensus 69 -vDvvf~a~~~-------------~~s~~~~~~~~~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 69 -CDVIITCQGG-------------DYTNDVFPKLRAAGWNGYWIDAASS 103 (377)
T ss_dssp -CSEEEECSCH-------------HHHHHHHHHHHHTTCCSEEEECSST
T ss_pred -CCEEEECCCh-------------HHHHHHHHHHHHCCCCEEEEeCCcc
Confidence 9999998763 2355666677778874 66666654
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0061 Score=49.70 Aligned_cols=85 Identities=16% Similarity=0.221 Sum_probs=55.5
Q ss_pred CCeEEEEcCC---ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGST---GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.++|.|.|++ |.+|..+++.|.+.|++|+.+ ++... . ..++.+ .-++.|. .+.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V--np~~~--------~---i~G~~~-y~sl~~l------~~~---- 77 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPV--NPKYE--------E---VLGRKC-YPSVLDI------PDK---- 77 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--CTTCS--------E---ETTEEC-BSSGGGC------SSC----
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE--CCCCC--------e---ECCeec-cCCHHHc------CCC----
Confidence 4789999998 899999999999999986555 33321 0 113322 1233221 123
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
+|+++-+.. -.....+++.|.+.|++.+++.+
T Consensus 78 vDlvvi~vp-------------~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 78 IEVVDLFVK-------------PKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp CSEEEECSC-------------HHHHHHHHHHHHHHTCSEEEECT
T ss_pred CCEEEEEeC-------------HHHHHHHHHHHHHcCCCEEEECC
Confidence 899987543 24466678888888998776544
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0019 Score=61.44 Aligned_cols=98 Identities=23% Similarity=0.264 Sum_probs=61.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVS-RGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~ 161 (405)
.+.+|||+||+|.+|...++.+.. .|.+|+++++++++. +.+..+ +...+ .|..+ .+.+.+.... ++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~-------~~~~~l-Gad~v-i~~~~--~~~~~v~~~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ-------EWVKSL-GAHHV-IDHSK--PLAAEVAALGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH-------HHHHHT-TCSEE-ECTTS--CHHHHHHTTCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH-------HHHHHc-CCCEE-EeCCC--CHHHHHHHhcCCC
Confidence 467899999999999999887776 589999999987643 223333 33332 24433 2333333221 36
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
+|+||+++|.. ......++.++.. +++|.++
T Consensus 240 ~Dvvid~~g~~------------~~~~~~~~~l~~~--G~iv~~g 270 (363)
T 4dvj_A 240 PAFVFSTTHTD------------KHAAEIADLIAPQ--GRFCLID 270 (363)
T ss_dssp EEEEEECSCHH------------HHHHHHHHHSCTT--CEEEECS
T ss_pred ceEEEECCCch------------hhHHHHHHHhcCC--CEEEEEC
Confidence 99999988732 1223344444433 4888774
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0041 Score=58.22 Aligned_cols=110 Identities=14% Similarity=0.136 Sum_probs=69.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhh-hcc-CCcEEEE-cCCCCHHHHHHHHHhhCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETL-NQL-QGASVCF-SDVTNLESLEKSLENLGT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~-~~~-~~v~~~~-~Dl~d~~~l~~~~~~~~~ 160 (405)
+++|.|+|| |.+|..++..|+..|+ +|++++++++........+... ... ....+.. .| + +++++
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~-~al~~--- 82 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENN------Y-EYLQN--- 82 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESC------G-GGGTT---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCC------H-HHHCC---
Confidence 468999998 9999999999999998 9999999876654211111111 100 1112222 23 2 34566
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||-+++.... ...+....|..-.+.+.+.+.+...+ .+|.+|
T Consensus 83 -aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 131 (328)
T 2hjr_A 83 -SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT 131 (328)
T ss_dssp -CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred -CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999998875421 22345566888888888887776544 344343
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00036 Score=69.78 Aligned_cols=39 Identities=21% Similarity=0.289 Sum_probs=31.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
+++++++|||| |++|++++..|++.|++|+++.|+.++.
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a 400 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERA 400 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 46778999999 7999999999999999999999987553
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0052 Score=59.58 Aligned_cols=71 Identities=13% Similarity=0.105 Sum_probs=55.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
-+.+++|+|.|+ |.+|+.+++.+.+.|++|++++.++... .... .-+.+.+|+.|.+.+.+++++
T Consensus 32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p--------~~~~--ad~~~~~~~~d~~~l~~~a~~---- 96 (419)
T 4e4t_A 32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASP--------AGAV--ADRHLRAAYDDEAALAELAGL---- 96 (419)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCH--------HHHH--SSEEECCCTTCHHHHHHHHHH----
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCc--------hhhh--CCEEEECCcCCHHHHHHHHhc----
Confidence 345789999998 8999999999999999999998665432 1111 124566899999999999987
Q ss_pred ccEEEE
Q 043385 162 IDVVVS 167 (405)
Q Consensus 162 ~d~Vv~ 167 (405)
+|+|+.
T Consensus 97 ~D~V~~ 102 (419)
T 4e4t_A 97 CEAVST 102 (419)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999984
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0025 Score=59.48 Aligned_cols=36 Identities=22% Similarity=0.531 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREK 119 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~ 119 (405)
.++.+|+|.|+ |++|+++++.|+..|. ++++++++.
T Consensus 32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 34679999999 9999999999999994 788988865
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0012 Score=62.22 Aligned_cols=100 Identities=15% Similarity=0.215 Sum_probs=63.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC-HHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN-LESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~~~~~ 160 (405)
.+.+|||+|| |.+|...++.+... |++|+++++++++. +....+ +...+ .|..+ .+.+.++.++ .
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~-------~~~~~l-Ga~~v-i~~~~~~~~~~~~~~g--~ 237 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHR-------DFALEL-GADYV-SEMKDAESLINKLTDG--L 237 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHH-------HHHHHH-TCSEE-ECHHHHHHHHHHHHTT--C
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-------HHHHHh-CCCEE-eccccchHHHHHhhcC--C
Confidence 5789999999 99999999988888 99999999877653 222222 22222 24333 3333332222 2
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
++|+||+++|.. ......++.++.. +++|.++...
T Consensus 238 g~D~vid~~g~~------------~~~~~~~~~l~~~--G~iv~~g~~~ 272 (344)
T 2h6e_A 238 GASIAIDLVGTE------------ETTYNLGKLLAQE--GAIILVGMEG 272 (344)
T ss_dssp CEEEEEESSCCH------------HHHHHHHHHEEEE--EEEEECCCCS
T ss_pred CccEEEECCCCh------------HHHHHHHHHhhcC--CEEEEeCCCC
Confidence 599999998742 1233444444443 4788877543
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0058 Score=57.89 Aligned_cols=94 Identities=17% Similarity=0.335 Sum_probs=55.4
Q ss_pred CeEEEEcCCChhHHHHHH-HHHhCC---CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVE-ELVSRG---FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~-~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
|+|.|.||||++|+.+++ .|.++. .++..++-+.... .+....+.+...-|..+++. +++
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~--------~~~~~~~~~~~~~~~~~~~~----~~~---- 64 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGV--------PAPNFGKDAGMLHDAFDIES----LKQ---- 64 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--------BCCCSSSCCCBCEETTCHHH----HTT----
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCc--------CHHHhCCCceEEEecCChhH----hcc----
Confidence 589999999999999999 666665 3566554322211 01111111111123334433 456
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAI 208 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~ 208 (405)
+|+||.|++. ..++.++..+.+.|.+ ++|=.|+.
T Consensus 65 ~Dvvf~a~~~-------------~~s~~~~~~~~~~G~k~~VID~ss~ 99 (370)
T 3pzr_A 65 LDAVITCQGG-------------SYTEKVYPALRQAGWKGYWIDAAST 99 (370)
T ss_dssp CSEEEECSCH-------------HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred CCEEEECCCh-------------HHHHHHHHHHHHCCCCEEEEeCCch
Confidence 9999998763 2345566667778874 56666654
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0011 Score=60.18 Aligned_cols=40 Identities=13% Similarity=0.234 Sum_probs=35.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCc
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGI 122 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~ 122 (405)
+..+++++|+|+ |++|+.++..|.+.|. +|+++.|+.++.
T Consensus 117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a 157 (272)
T 3pwz_A 117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKA 157 (272)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHH
T ss_pred CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 457889999998 8999999999999995 999999987654
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0057 Score=57.06 Aligned_cols=110 Identities=16% Similarity=0.207 Sum_probs=69.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhh-h-ccCCcEEEE-cCCCCHHHHHHHHHhhCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETL-N-QLQGASVCF-SDVTNLESLEKSLENLGT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~-~-~~~~v~~~~-~Dl~d~~~l~~~~~~~~~ 160 (405)
+++|.|+|| |.+|..++..|+..|+ +|+++++++++.......+... . .....++.. .| . +++++
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~-~al~~--- 72 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT------Y-DDLAG--- 72 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC------G-GGGTT---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCC------H-HHhCC---
Confidence 468999998 9999999999999997 9999999876553211111111 0 011222222 23 2 34666
Q ss_pred CccEEEEcccccCC-C-------CcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 161 SIDVVVSCLASRSG-G-------VKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~-~-------~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.+++.... + ..+....|..-.+.+.+.+.+...+ .+|.+|
T Consensus 73 -aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 126 (322)
T 1t2d_A 73 -ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 126 (322)
T ss_dssp -CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred -CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9999998875421 1 3345667777788888877776543 444443
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0024 Score=51.67 Aligned_cols=89 Identities=18% Similarity=0.330 Sum_probs=57.6
Q ss_pred CCCCeEEEEcCC---ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGST---GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+.++|.|.|+| |.+|..+++.|++.|++|+.++++.+.. .++.++ .++.| +.+.
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-------------~G~~~~-~s~~e------l~~~-- 69 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-------------EGLKCY-RSVRE------LPKD-- 69 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-------------TTEECB-SSGGG------SCTT--
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-------------CCeeec-CCHHH------hCCC--
Confidence 345789999998 8999999999999999977766553211 133221 12222 1224
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+|+++-+.. -.....+++.+.+.|++.++..++.
T Consensus 70 --vDlvii~vp-------------~~~v~~v~~~~~~~g~~~i~~~~~~ 103 (138)
T 1y81_A 70 --VDVIVFVVP-------------PKVGLQVAKEAVEAGFKKLWFQPGA 103 (138)
T ss_dssp --CCEEEECSC-------------HHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred --CCEEEEEeC-------------HHHHHHHHHHHHHcCCCEEEEcCcc
Confidence 899997654 1345556777777899877766543
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0044 Score=57.50 Aligned_cols=109 Identities=12% Similarity=0.091 Sum_probs=71.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
|||.|+|| |.+|..++..|+..+ .+|+++++++++..+....+.... ....+++.. | +. +++++ +
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~----~a~~~----a 68 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SY----GDLEG----A 68 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----GGGTT----E
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CH----HHhCC----C
Confidence 58999998 999999999999887 689999998755432111111110 012344443 2 22 34666 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
|+||..++.... ...+....|....+.+++.+.+.+.+ .+|.+|
T Consensus 69 D~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 116 (310)
T 2xxj_A 69 RAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT 116 (310)
T ss_dssp EEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 999998886532 12245677888888899888887644 455443
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0027 Score=58.94 Aligned_cols=109 Identities=13% Similarity=0.096 Sum_probs=68.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCCCCcCCCCchhHh-hh-ccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSR--GFNVIAIAREKSGIRGRNDKEET-LN-QLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~~~~~~~~~~~~~-~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
|+|.|+|+ |.+|..++..|+.. |++|+++++++++.......... .. ......+... +|.+ + +++
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~---~-l~~---- 69 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA---D-TAN---- 69 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG---G-GTT----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHH---H-HCC----
Confidence 58999999 99999999999985 79999999997654321100000 00 0012222211 2322 2 556
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEE
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLL 205 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~ 205 (405)
+|+||-+++.... ...+....|..-.+.+++.+.+...+ .+|.+
T Consensus 70 aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~ 117 (310)
T 1guz_A 70 SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV 117 (310)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 9999998875422 13345667888888888888776543 45544
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0034 Score=58.48 Aligned_cols=108 Identities=15% Similarity=0.162 Sum_probs=67.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhH-hhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEE-TLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~-~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
|+|.|+|+ |.+|..++..|+..|+ +|+++++++++......... .........+.. +|.+ ++++ +
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~----~~~~----a 68 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYA----DLKG----S 68 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG----GGTT----C
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHH----HhCC----C
Confidence 58999999 9999999999999998 99999998754432111000 010011223322 2332 3455 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEE
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLL 205 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~ 205 (405)
|+||.+++.... ...+....|....+.+++.+.+...+ .+|.+
T Consensus 69 DvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~ 115 (319)
T 1a5z_A 69 DVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV 115 (319)
T ss_dssp SEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence 999998875432 12345566777788888888776444 44443
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0017 Score=61.35 Aligned_cols=105 Identities=15% Similarity=0.134 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCch-------------------hHhhhccCCcEEEE
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDK-------------------EETLNQLQGASVCF 142 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~-------------------~~~~~~~~~v~~~~ 142 (405)
++..+|+|.|+ |.+|+++++.|+..|. ++++++++.-......+. +..+...-.++.+.
T Consensus 116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 194 (353)
T 3h5n_A 116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIA 194 (353)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEee
Confidence 34679999999 8899999999999994 799999865322111110 01111112456666
Q ss_pred cCCCCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHH-HHHHHHHhcCCCEEEEEc
Q 043385 143 SDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANR-NSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 143 ~Dl~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~-~ll~aa~~~~v~~~V~~S 206 (405)
.++++...+.+ +++ +|+||.+... ...++ .+-++|.+.++. +|+.+
T Consensus 195 ~~i~~~~~~~~-~~~----~DlVvd~~Dn------------~~~~r~~ln~~c~~~~~p-~i~~~ 241 (353)
T 3h5n_A 195 LNINDYTDLHK-VPE----ADIWVVSADH------------PFNLINWVNKYCVRANQP-YINAG 241 (353)
T ss_dssp CCCCSGGGGGG-SCC----CSEEEECCCC------------STTHHHHHHHHHHHTTCC-EEEEE
T ss_pred cccCchhhhhH-hcc----CCEEEEecCC------------hHHHHHHHHHHHHHhCCC-EEEEE
Confidence 77776654555 665 9999986532 11123 344678888864 55544
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0022 Score=59.88 Aligned_cols=74 Identities=24% Similarity=0.352 Sum_probs=48.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCccEE
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSIDVV 165 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~d~V 165 (405)
+|||+||+|.+|...++.+...|++|+++++++++. +....+ +...+ .|..+.+ .+.++.+. +++|+|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~-------~~~~~l-Ga~~~-i~~~~~~--~~~~~~~~~~~~d~v 220 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH-------DYLRVL-GAKEV-LAREDVM--AERIRPLDKQRWAAA 220 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH-------HHHHHT-TCSEE-EECC-----------CCSCCEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHc-CCcEE-EecCCcH--HHHHHHhcCCcccEE
Confidence 799999999999999999999999999999987654 222333 33222 2444432 11121111 359999
Q ss_pred EEcccc
Q 043385 166 VSCLAS 171 (405)
Q Consensus 166 v~~a~~ 171 (405)
|+++|.
T Consensus 221 id~~g~ 226 (328)
T 1xa0_A 221 VDPVGG 226 (328)
T ss_dssp EECSTT
T ss_pred EECCcH
Confidence 999874
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0037 Score=58.00 Aligned_cols=107 Identities=18% Similarity=0.244 Sum_probs=67.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhh-cc-CCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLN-QL-QGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~-~~-~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
|+|.|+| +|.+|..++..|++.| ++|++++|++++............ .. ..+.....| . +++++
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d---~----~~~~~---- 69 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---W----AALAD---- 69 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---G----GGGTT----
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCC---H----HHhCC----
Confidence 6899999 5999999999999999 899999998755432111111000 00 123332333 2 23455
Q ss_pred ccEEEEcccccC-----C--CCcchhHhHHHHHHHHHHHHHhcCCC-EEEE
Q 043385 162 IDVVVSCLASRS-----G--GVKDSWKIDYEANRNSLVAGRNCGAS-HFVL 204 (405)
Q Consensus 162 ~d~Vv~~a~~~~-----~--~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~ 204 (405)
+|+||-+++... + ...+....|+...+.+++.+.+...+ .+|.
T Consensus 70 aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~ 120 (309)
T 1hyh_A 70 ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV 120 (309)
T ss_dssp CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE
Confidence 999999887533 1 22345667888888888888776544 3443
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.004 Score=57.73 Aligned_cols=68 Identities=26% Similarity=0.385 Sum_probs=50.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+|+|.|.|. |.+|..+++.|++.|++|++.+|++++. +.+... ++.. ..++.+++++ +
T Consensus 19 ~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~-------~~l~~~-g~~~-------~~~~~~~~~~----a 78 (310)
T 3doj_A 19 SHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKC-------DELVEH-GASV-------CESPAEVIKK----C 78 (310)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG-------HHHHHT-TCEE-------CSSHHHHHHH----C
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHH-------HHHHHC-CCeE-------cCCHHHHHHh----C
Confidence 34689999986 9999999999999999999999998764 223221 3332 2235566777 8
Q ss_pred cEEEEccc
Q 043385 163 DVVVSCLA 170 (405)
Q Consensus 163 d~Vv~~a~ 170 (405)
|+||-+..
T Consensus 79 Dvvi~~vp 86 (310)
T 3doj_A 79 KYTIAMLS 86 (310)
T ss_dssp SEEEECCS
T ss_pred CEEEEEcC
Confidence 99998764
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0057 Score=57.87 Aligned_cols=101 Identities=19% Similarity=0.365 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCC--CHHHHHHHHHh-h
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT--NLESLEKSLEN-L 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--d~~~l~~~~~~-~ 158 (405)
..+.+|||+|+ |.+|...++.+...|. +|+++++++++. +....+ +...+ .|.. |.+++.+.+.. .
T Consensus 170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-------~~a~~l-Ga~~v-i~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRL-------SKAKEI-GADLV-LQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-------HHHHHT-TCSEE-EECSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-------HHHHHh-CCCEE-EcCcccccchHHHHHHHHh
Confidence 34679999996 9999999998888998 899999887643 222222 33222 2444 22233222221 1
Q ss_pred CCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 159 GTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
.+++|+||+++|.. ......++.++.. +++|.++.
T Consensus 240 ~~g~D~vid~~g~~------------~~~~~~~~~l~~~--G~iv~~G~ 274 (356)
T 1pl8_A 240 GCKPEVTIECTGAE------------ASIQAGIYATRSG--GTLVLVGL 274 (356)
T ss_dssp TSCCSEEEECSCCH------------HHHHHHHHHSCTT--CEEEECSC
T ss_pred CCCCCEEEECCCCh------------HHHHHHHHHhcCC--CEEEEEec
Confidence 12599999998732 1123344444433 48888775
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0042 Score=58.67 Aligned_cols=96 Identities=22% Similarity=0.343 Sum_probs=58.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEe--cCCCCcCCCCchhHhhhcc---------CCcEEEEcCCCCHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-FNVIAIA--REKSGIRGRNDKEETLNQL---------QGASVCFSDVTNLESLE 152 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~--r~~~~~~~~~~~~~~~~~~---------~~v~~~~~Dl~d~~~l~ 152 (405)
+++|.|.||+|.+|+.+++.|.+.. .+|+++. +..... ......... ..+.+ .|+ |++.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~~- 75 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGK----KYKDAVKWIEQGDIPEEVQDLPI--VST-NYEDH- 75 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTS----BHHHHCCCCSSSSCCHHHHTCBE--ECS-SGGGG-
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCC----CHHHhcCcccccccccCCceeEE--eeC-CHHHh-
Confidence 4789999999999999999998875 5787775 221110 000000000 01222 333 33332
Q ss_pred HHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 153 KSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 153 ~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
++ +|+||.|.+. ..+..+++.+.++|++ +|-.|+..
T Consensus 76 ---~~----vDvVf~atp~-------------~~s~~~a~~~~~aG~~-VId~s~~~ 111 (350)
T 2ep5_A 76 ---KD----VDVVLSALPN-------------ELAESIELELVKNGKI-VVSNASPF 111 (350)
T ss_dssp ---TT----CSEEEECCCH-------------HHHHHHHHHHHHTTCE-EEECSSTT
T ss_pred ---cC----CCEEEECCCh-------------HHHHHHHHHHHHCCCE-EEECCccc
Confidence 45 9999987762 2355677788888874 77777653
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0088 Score=60.33 Aligned_cols=91 Identities=19% Similarity=0.177 Sum_probs=68.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
++|+|.|+ |-+|+++++.|.+.|++|++++++++.... . ..++.||.+|++.++++=- .++|+|
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~----------~--~~~i~gD~t~~~~L~~agi---~~ad~v 412 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCN----------D--HVVVYGDATVGQTLRQAGI---DRASGI 412 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCC----------S--SCEEESCSSSSTHHHHHTT---TSCSEE
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhh----------c--CCEEEeCCCCHHHHHhcCc---cccCEE
Confidence 78999999 999999999999999999999999886531 1 1789999999998887532 359999
Q ss_pred EEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC-EEEE
Q 043385 166 VSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS-HFVL 204 (405)
Q Consensus 166 v~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~ 204 (405)
|-+.+.. +.|+.. ...+++.+.+ ++|-
T Consensus 413 i~~~~~d--------~~ni~~----~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 413 IVTTNDD--------STNIFL----TLACRHLHSHIRIVA 440 (565)
T ss_dssp EECCSCH--------HHHHHH----HHHHHHHCSSSEEEE
T ss_pred EEECCCc--------hHHHHH----HHHHHHHCCCCEEEE
Confidence 9765421 345543 3455666765 5553
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0013 Score=60.38 Aligned_cols=37 Identities=16% Similarity=0.359 Sum_probs=34.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
+|+|.|.|+||.+|+.+++.|.+.|++|++++|++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~ 47 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEG 47 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 4799999999999999999999999999999998654
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0059 Score=57.86 Aligned_cols=38 Identities=21% Similarity=0.301 Sum_probs=33.2
Q ss_pred CC-CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 84 KD-INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 84 ~~-~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
.+ .+|||+||+|.+|...++.+...|++|++++++.++
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~ 204 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 204 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 46 799999999999999999888889999999876654
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0022 Score=61.85 Aligned_cols=73 Identities=36% Similarity=0.485 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
..+++|+|+|+ |.+|+.+++.|...|. +|++++|++++.. +..... +... .+ .+++.+.+.+
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~------~la~~~-g~~~--~~---~~~l~~~l~~---- 227 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV------ELARDL-GGEA--VR---FDELVDHLAR---- 227 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH------HHHHHH-TCEE--CC---GGGHHHHHHT----
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHH------HHHHHc-CCce--ec---HHhHHHHhcC----
Confidence 56889999998 9999999999999998 8999999875431 111111 3332 22 2356677777
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
+|+||.+.+..
T Consensus 228 aDvVi~at~~~ 238 (404)
T 1gpj_A 228 SDVVVSATAAP 238 (404)
T ss_dssp CSEEEECCSSS
T ss_pred CCEEEEccCCC
Confidence 99999987643
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0045 Score=50.21 Aligned_cols=88 Identities=19% Similarity=0.224 Sum_probs=55.1
Q ss_pred CCeEEEEcCC---ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGST---GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.++|.|.|++ |.+|..+++.|.+.|++|+.+. +.+.. + ...++.++ -++.|.. +.
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vn--p~~~~------~---~i~G~~~~-~sl~el~------~~---- 70 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVN--PRFQG------E---ELFGEEAV-ASLLDLK------EP---- 70 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEEC--GGGTT------S---EETTEECB-SSGGGCC------SC----
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeC--CCccc------C---cCCCEEec-CCHHHCC------CC----
Confidence 4789999999 8899999999999999865554 33110 0 01122221 1222211 13
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
+|+++-+... ..+..+++.|.+.|++.++..++
T Consensus 71 vDlavi~vp~-------------~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 71 VDILDVFRPP-------------SALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp CSEEEECSCH-------------HHHTTTHHHHHHHCCSCEEECTT
T ss_pred CCEEEEEeCH-------------HHHHHHHHHHHHcCCCEEEEcCC
Confidence 8998876432 33455677788889987765443
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0033 Score=57.82 Aligned_cols=72 Identities=21% Similarity=0.354 Sum_probs=53.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
....+++|+|.|+ |.+|+.+++.|...|.+|++.+|++++. +..... +++.+. .+++.+++++
T Consensus 151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~-------~~~~~~-g~~~~~-----~~~l~~~l~~--- 213 (293)
T 3d4o_A 151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLL-------ARIAEM-GMEPFH-----ISKAAQELRD--- 213 (293)
T ss_dssp SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHT-TSEEEE-----GGGHHHHTTT---
T ss_pred CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHH-------HHHHHC-CCeecC-----hhhHHHHhcC---
Confidence 3577899999996 9999999999999999999999986532 112222 444332 2456677776
Q ss_pred CccEEEEccc
Q 043385 161 SIDVVVSCLA 170 (405)
Q Consensus 161 ~~d~Vv~~a~ 170 (405)
+|+|+.+..
T Consensus 214 -aDvVi~~~p 222 (293)
T 3d4o_A 214 -VDVCINTIP 222 (293)
T ss_dssp -CSEEEECCS
T ss_pred -CCEEEECCC
Confidence 999999765
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0031 Score=58.19 Aligned_cols=73 Identities=19% Similarity=0.351 Sum_probs=53.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
....+++|+|.|+ |.+|+.+++.|...|++|++.+|++++. ..+... +++.+. .+++.+++++
T Consensus 153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~-------~~~~~~-g~~~~~-----~~~l~~~l~~--- 215 (300)
T 2rir_A 153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHL-------ARITEM-GLVPFH-----TDELKEHVKD--- 215 (300)
T ss_dssp SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHT-TCEEEE-----GGGHHHHSTT---
T ss_pred CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHC-CCeEEc-----hhhHHHHhhC---
Confidence 4577899999997 9999999999999999999999986532 112221 444332 2346677776
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
+|+|+.+.+.
T Consensus 216 -aDvVi~~~p~ 225 (300)
T 2rir_A 216 -IDICINTIPS 225 (300)
T ss_dssp -CSEEEECCSS
T ss_pred -CCEEEECCCh
Confidence 9999998764
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0039 Score=56.39 Aligned_cols=65 Identities=22% Similarity=0.369 Sum_probs=48.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+++|+|+|+ |+.|++++..|.+.|.+|+++.|+.++.. .+... +++.+ ++.+.. + +|+
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~-------~la~~-~~~~~--~~~~l~-------~----~Di 175 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLD-------FFQRL-GCDCF--MEPPKS-------A----FDL 175 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHH-------HHHHH-TCEEE--SSCCSS-------C----CSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------HHHHC-CCeEe--cHHHhc-------c----CCE
Confidence 789999998 99999999999999999999999987752 22222 23333 333321 4 899
Q ss_pred EEEcccc
Q 043385 165 VVSCLAS 171 (405)
Q Consensus 165 Vv~~a~~ 171 (405)
||++.+.
T Consensus 176 VInaTp~ 182 (269)
T 3phh_A 176 IINATSA 182 (269)
T ss_dssp EEECCTT
T ss_pred EEEcccC
Confidence 9997654
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0073 Score=49.29 Aligned_cols=87 Identities=23% Similarity=0.296 Sum_probs=55.1
Q ss_pred CCeEEEEcCC---ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGST---GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.++|.|.|++ |.+|..+++.|.+.|++|+.+++..... ...++.++ -++.|.. +.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~-----------~i~G~~~~-~sl~el~------~~---- 70 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGK-----------TLLGQQGY-ATLADVP------EK---- 70 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTS-----------EETTEECC-SSTTTCS------SC----
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccc-----------ccCCeecc-CCHHHcC------CC----
Confidence 4689999998 8899999999999999977766554101 01133221 2343321 23
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
+|+++-+... .....+++.+.+.|++.++..+
T Consensus 71 ~Dlvii~vp~-------------~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 71 VDMVDVFRNS-------------EAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp CSEEECCSCS-------------THHHHHHHHHHHHTCCEEECCT
T ss_pred CCEEEEEeCH-------------HHHHHHHHHHHHcCCCEEEEcC
Confidence 8999976442 1234456666677888766543
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0019 Score=63.19 Aligned_cols=36 Identities=33% Similarity=0.555 Sum_probs=33.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
|+|.|.|+ |.+|..++..|++.|++|++++|++++.
T Consensus 3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v 38 (450)
T 3gg2_A 3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKI 38 (450)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHH
Confidence 78999987 9999999999999999999999987654
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0029 Score=60.24 Aligned_cols=104 Identities=20% Similarity=0.285 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHH---hh
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLE---NL 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~---~~ 158 (405)
..+.+|||+|+ |.+|...++.+...|+ +|+++++++++. +....+ +...+ .|..+.+..+.+.+ ..
T Consensus 181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-------~~a~~l-Ga~~v-i~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKR-------RLAEEV-GATAT-VDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH-------HHHHHH-TCSEE-ECTTSSCHHHHHHSTTSSS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-------HHHHHc-CCCEE-ECCCCcCHHHHHHhhhhcc
Confidence 34679999998 9999999999999998 888888876543 222222 33322 35554443333222 11
Q ss_pred CCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 159 GTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
.+++|+||+++|.. ......++.++.. +++|.++....
T Consensus 251 ~gg~Dvvid~~G~~------------~~~~~~~~~l~~~--G~vv~~G~~~~ 288 (370)
T 4ej6_A 251 PGGVDVVIECAGVA------------ETVKQSTRLAKAG--GTVVILGVLPQ 288 (370)
T ss_dssp TTCEEEEEECSCCH------------HHHHHHHHHEEEE--EEEEECSCCCT
T ss_pred CCCCCEEEECCCCH------------HHHHHHHHHhccC--CEEEEEeccCC
Confidence 13699999988732 1233344444443 48888776544
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.011 Score=56.18 Aligned_cols=103 Identities=20% Similarity=0.240 Sum_probs=62.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC-HHHHHHHHHhh-CC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN-LESLEKSLENL-GT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~~~-~~ 160 (405)
.+.+|||+|+ |.+|...++.+...|. +|+++++++++. +....+ +...+ .|..+ .+++.+.+... .+
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-------~~~~~l-Ga~~v-i~~~~~~~~~~~~~~~~~~~ 261 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF-------EKAKVF-GATDF-VNPNDHSEPISQVLSKMTNG 261 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-------HHHHHT-TCCEE-ECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH-------HHHHHh-CCceE-EeccccchhHHHHHHHHhCC
Confidence 4679999996 9999999999888998 899999887654 222332 33322 24442 11233322211 13
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
++|+||+++|.. ......++.++.. .+++|.++...
T Consensus 262 g~D~vid~~g~~------------~~~~~~~~~l~~~-~G~iv~~G~~~ 297 (374)
T 1cdo_A 262 GVDFSLECVGNV------------GVMRNALESCLKG-WGVSVLVGWTD 297 (374)
T ss_dssp CBSEEEECSCCH------------HHHHHHHHTBCTT-TCEEEECSCCS
T ss_pred CCCEEEECCCCH------------HHHHHHHHHhhcC-CcEEEEEcCCC
Confidence 599999998742 1123334444333 15898887543
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0035 Score=59.73 Aligned_cols=74 Identities=23% Similarity=0.355 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+.+|||+|+ |.+|...++.+...|++|+++++++++. +....+ +...+ .|..+.+.+++... ++|
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~-------~~a~~l-Ga~~v-i~~~~~~~~~~~~~----g~D 259 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-------EAAKAL-GADEV-VNSRNADEMAAHLK----SFD 259 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-------HHHHHH-TCSEE-EETTCHHHHHTTTT----CEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHc-CCcEE-eccccHHHHHHhhc----CCC
Confidence 4679999998 8899999998888999999999987654 222222 22222 35666554443333 499
Q ss_pred EEEEcccc
Q 043385 164 VVVSCLAS 171 (405)
Q Consensus 164 ~Vv~~a~~ 171 (405)
+||+++|.
T Consensus 260 vvid~~g~ 267 (369)
T 1uuf_A 260 FILNTVAA 267 (369)
T ss_dssp EEEECCSS
T ss_pred EEEECCCC
Confidence 99999885
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.011 Score=56.13 Aligned_cols=78 Identities=17% Similarity=0.302 Sum_probs=51.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh-CCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL-GTS 161 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~~ 161 (405)
..+.+|||+||+|.+|...++.+...|++|+++. ++++. +....+ +...+ .|..+.+ +.+.+... .++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~-------~~~~~l-Ga~~v-i~~~~~~-~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNF-------DLAKSR-GAEEV-FDYRAPN-LAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH-------HHHHHT-TCSEE-EETTSTT-HHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHH-------HHHHHc-CCcEE-EECCCch-HHHHHHHHccCC
Confidence 4578999999999999999999999999998886 44432 223333 33322 2444443 22222221 135
Q ss_pred ccEEEEcccc
Q 043385 162 IDVVVSCLAS 171 (405)
Q Consensus 162 ~d~Vv~~a~~ 171 (405)
+|+||+++|.
T Consensus 232 ~d~v~d~~g~ 241 (371)
T 3gqv_A 232 LRYALDCITN 241 (371)
T ss_dssp CCEEEESSCS
T ss_pred ccEEEECCCc
Confidence 9999999884
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0056 Score=56.92 Aligned_cols=108 Identities=13% Similarity=0.109 Sum_probs=65.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCch-hHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDK-EETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~-~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+|+|.|+|+ |.+|..++..|+..|+ +|++++|++++....... ...........+... .|.+ .+++
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~----~~~~---- 75 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE----ICRD---- 75 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG----GGTT----
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHH----HhCC----
Confidence 479999998 9999999999999998 999999986443210000 000100112232222 1222 2445
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEE
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFV 203 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V 203 (405)
+|+||-+++.... ...+....|....+.+++.+.+.+.+.+|
T Consensus 76 aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~v 120 (319)
T 1lld_A 76 ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIY 120 (319)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 9999998875421 22335566777777777777765444344
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0032 Score=59.76 Aligned_cols=75 Identities=19% Similarity=0.244 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCC------------------
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV------------------ 145 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl------------------ 145 (405)
.+.+|+|+|+ |-+|...++.|...|.+|++++|++.+. +.+... +.+++..|+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l-------~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~ 253 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVA-------EQVRSV-GAQWLDLGIDAAGEGGYARELSEAERA 253 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGH-------HHHHHT-TCEECCCC-------------CHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHH-------HHHHHc-CCeEEeccccccccccchhhhhHHHHh
Confidence 4679999999 9999999999999999999999998754 222322 444443221
Q ss_pred CCHHHHHHHHHhhCCCccEEEEcccc
Q 043385 146 TNLESLEKSLENLGTSIDVVVSCLAS 171 (405)
Q Consensus 146 ~d~~~l~~~~~~~~~~~d~Vv~~a~~ 171 (405)
.+.+.+.+++++ +|+||.++..
T Consensus 254 ~~~~~l~e~l~~----aDIVI~tv~i 275 (381)
T 3p2y_A 254 QQQQALEDAITK----FDIVITTALV 275 (381)
T ss_dssp HHHHHHHHHHTT----CSEEEECCCC
T ss_pred hhHHHHHHHHhc----CCEEEECCCC
Confidence 123456677776 9999987644
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0068 Score=57.96 Aligned_cols=76 Identities=18% Similarity=0.248 Sum_probs=55.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcC----------------CCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSD----------------VTN 147 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~D----------------l~d 147 (405)
.+.+|+|+|+ |-+|...++.|...|++|+++++++.+. +..... +.+++..+ +++
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l-------~~~~~~-G~~~~~~~~~~~~d~~~~~~ya~e~s~ 259 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAK-------EQVASL-GAKFIAVEDEEFKAAETAGGYAKEMSG 259 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHH-------HHHHHT-TCEECCCCC-----------------C
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHH-------HHHHHc-CCceeecccccccccccccchhhhcch
Confidence 4579999999 9999999999999999999999998754 222222 33433322 122
Q ss_pred ------HHHHHHHHHhhCCCccEEEEccccc
Q 043385 148 ------LESLEKSLENLGTSIDVVVSCLASR 172 (405)
Q Consensus 148 ------~~~l~~~~~~~~~~~d~Vv~~a~~~ 172 (405)
.+.+.+++++ +|+||.++...
T Consensus 260 ~~~~~~~~~l~e~l~~----aDVVI~tvlip 286 (405)
T 4dio_A 260 EYQVKQAALVAEHIAK----QDIVITTALIP 286 (405)
T ss_dssp HHHHHHHHHHHHHHHT----CSEEEECCCCS
T ss_pred hhhhhhHhHHHHHhcC----CCEEEECCcCC
Confidence 2467888888 99999987544
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0061 Score=58.36 Aligned_cols=39 Identities=21% Similarity=0.193 Sum_probs=34.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
..+++|+|+|+ |.+|..+++.+...|.+|++++|++.+.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~ 208 (384)
T 1l7d_A 170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK 208 (384)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 46789999997 9999999999999999999999987654
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.53 E-value=0.013 Score=55.78 Aligned_cols=103 Identities=15% Similarity=0.252 Sum_probs=62.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC-HHHHHHHHHhhC-C
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN-LESLEKSLENLG-T 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~~~~-~ 160 (405)
.+.+|||+|+ |.+|...++.+...|. +|+++++++++. +....+ +...+ .|..+ .+++.+.+.... +
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-------~~~~~l-Ga~~v-i~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKF-------AKAKEV-GATEC-VNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-------HHHHHT-TCSEE-ECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-------HHHHHh-CCceE-ecccccchhHHHHHHHHhCC
Confidence 4679999995 9999999999988998 899999887654 222332 33222 24432 122333333211 3
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
++|+||+++|.. ......++.++.. .+++|.++...
T Consensus 261 g~D~vid~~g~~------------~~~~~~~~~l~~~-~G~iv~~G~~~ 296 (374)
T 2jhf_A 261 GVDFSFEVIGRL------------DTMVTALSCCQEA-YGVSVIVGVPP 296 (374)
T ss_dssp CBSEEEECSCCH------------HHHHHHHHHBCTT-TCEEEECSCCC
T ss_pred CCcEEEECCCCH------------HHHHHHHHHhhcC-CcEEEEeccCC
Confidence 599999998742 1123344444433 14888877543
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0096 Score=57.35 Aligned_cols=77 Identities=19% Similarity=0.193 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHH---HHHHHHhh
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLES---LEKSLENL 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---l~~~~~~~ 158 (405)
..+.+|||+|+ |.+|...++.+...|+ +|+++++++++. +....+ +...+ .|..+.+. +.+...+
T Consensus 212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-------~~~~~l-Ga~~v-i~~~~~~~~~~i~~~t~g- 280 (404)
T 3ip1_A 212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRR-------NLAKEL-GADHV-IDPTKENFVEAVLDYTNG- 280 (404)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH-------HHHHHH-TCSEE-ECTTTSCHHHHHHHHTTT-
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-------HHHHHc-CCCEE-EcCCCCCHHHHHHHHhCC-
Confidence 35679999998 9999999999988998 899998887653 222232 33322 24444332 2222222
Q ss_pred CCCccEEEEcccc
Q 043385 159 GTSIDVVVSCLAS 171 (405)
Q Consensus 159 ~~~~d~Vv~~a~~ 171 (405)
.++|+||.++|.
T Consensus 281 -~g~D~vid~~g~ 292 (404)
T 3ip1_A 281 -LGAKLFLEATGV 292 (404)
T ss_dssp -CCCSEEEECSSC
T ss_pred -CCCCEEEECCCC
Confidence 359999999874
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0045 Score=56.49 Aligned_cols=99 Identities=16% Similarity=0.261 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEE-ecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSR-GFNVIAI-AREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++++|.|.|++|.+|+.+++.+.+. +.+++++ +|++....+.. ...+. ++. ..++.-.+++++++++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d--~gel~---G~~--~~gv~v~~dl~~ll~~---- 88 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKD--ASILI---GSD--FLGVRITDDPESAFSN---- 88 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSB--GGGGT---TCS--CCSCBCBSCHHHHTTS----
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccc--hHHhh---ccC--cCCceeeCCHHHHhcC----
Confidence 3468999999999999999998876 5776655 55543211100 01111 111 0122112235566665
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+|+||.+.. ...+...++.|.++|+ .+| ++|.
T Consensus 89 aDVvIDFT~-------------p~a~~~~~~~~l~~Gv-~vV-iGTT 120 (288)
T 3ijp_A 89 TEGILDFSQ-------------PQASVLYANYAAQKSL-IHI-IGTT 120 (288)
T ss_dssp CSEEEECSC-------------HHHHHHHHHHHHHHTC-EEE-ECCC
T ss_pred CCEEEEcCC-------------HHHHHHHHHHHHHcCC-CEE-EECC
Confidence 999998753 2345667778888887 455 4444
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0044 Score=62.04 Aligned_cols=36 Identities=22% Similarity=0.531 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREK 119 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~ 119 (405)
.+..+|+|.|+ |++|+++++.|+..|. ++++++++.
T Consensus 324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 45679999999 9999999999999994 799998865
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0032 Score=59.37 Aligned_cols=71 Identities=21% Similarity=0.360 Sum_probs=51.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+.+|||+|+ |.+|...++.+...|.+|+++++++++. +....+ +...+. .+.+.+.+ + +
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-------~~~~~l-Ga~~v~---~~~~~~~~---~----~ 235 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKK-------QDALSM-GVKHFY---TDPKQCKE---E----L 235 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTH-------HHHHHT-TCSEEE---SSGGGCCS---C----E
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHH-------HHHHhc-CCCeec---CCHHHHhc---C----C
Confidence 35789999997 9999999999999999999999988765 223333 333333 34444433 5 9
Q ss_pred cEEEEccccc
Q 043385 163 DVVVSCLASR 172 (405)
Q Consensus 163 d~Vv~~a~~~ 172 (405)
|+||+++|..
T Consensus 236 D~vid~~g~~ 245 (348)
T 3two_A 236 DFIISTIPTH 245 (348)
T ss_dssp EEEEECCCSC
T ss_pred CEEEECCCcH
Confidence 9999998853
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=96.50 E-value=0.011 Score=54.78 Aligned_cols=70 Identities=21% Similarity=0.374 Sum_probs=54.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
....+++|.|.|. |.||+.+++.|...|++|++.+|++.... ++....+ .+++.++++.
T Consensus 135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~-------------~~~~~~~----~~~l~ell~~--- 193 (315)
T 3pp8_A 135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWP-------------GVESYVG----REELRAFLNQ--- 193 (315)
T ss_dssp CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCT-------------TCEEEES----HHHHHHHHHT---
T ss_pred CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhh-------------hhhhhcc----cCCHHHHHhh---
Confidence 4567899999998 99999999999999999999999876431 2322221 3678888988
Q ss_pred CccEEEEccccc
Q 043385 161 SIDVVVSCLASR 172 (405)
Q Consensus 161 ~~d~Vv~~a~~~ 172 (405)
.|+|+.+....
T Consensus 194 -aDiV~l~~Plt 204 (315)
T 3pp8_A 194 -TRVLINLLPNT 204 (315)
T ss_dssp -CSEEEECCCCC
T ss_pred -CCEEEEecCCc
Confidence 99999876643
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0084 Score=56.25 Aligned_cols=102 Identities=16% Similarity=0.134 Sum_probs=62.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+.+|||+|+ |.+|...++.+...|.+|+++++++++. +....+ +...+ .|..+.+..+...+ ..+++
T Consensus 165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-------~~~~~l-Ga~~~-i~~~~~~~~~~~~~-~~g~~ 233 (340)
T 3s2e_A 165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKL-------NLARRL-GAEVA-VNARDTDPAAWLQK-EIGGA 233 (340)
T ss_dssp CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHT-TCSEE-EETTTSCHHHHHHH-HHSSE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHH-------HHHHHc-CCCEE-EeCCCcCHHHHHHH-hCCCC
Confidence 35679999997 8899999999999999999999987654 223333 33222 24444332222222 11359
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
|+||.+++.. ......++.++.. +++|.++...
T Consensus 234 d~vid~~g~~------------~~~~~~~~~l~~~--G~iv~~G~~~ 266 (340)
T 3s2e_A 234 HGVLVTAVSP------------KAFSQAIGMVRRG--GTIALNGLPP 266 (340)
T ss_dssp EEEEESSCCH------------HHHHHHHHHEEEE--EEEEECSCCS
T ss_pred CEEEEeCCCH------------HHHHHHHHHhccC--CEEEEeCCCC
Confidence 9999987632 1233344444433 4788776543
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0066 Score=58.40 Aligned_cols=76 Identities=20% Similarity=0.239 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCC-------------CH-
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT-------------NL- 148 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-------------d~- 148 (405)
..+++|+|+|+ |.+|..+++.+...|.+|++++|++.+. +..... +.+++..|.. +.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~-------~~~~~l-Ga~~~~~~~~~~~~~~~g~~~~~~~~ 240 (401)
T 1x13_A 170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVK-------EQVQSM-GAEFLELDFKEEAGSGDGYAKVMSDA 240 (401)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGH-------HHHHHT-TCEECCC--------CCHHHHHHSHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH-------HHHHHc-CCEEEEecccccccccccchhhccHH
Confidence 45789999997 9999999999999999999999987654 222332 4444322221 11
Q ss_pred ------HHHHHHHHhhCCCccEEEEcccc
Q 043385 149 ------ESLEKSLENLGTSIDVVVSCLAS 171 (405)
Q Consensus 149 ------~~l~~~~~~~~~~~d~Vv~~a~~ 171 (405)
+.+.+.+.+ +|+||.+++.
T Consensus 241 ~~~~~~~~l~e~~~~----aDvVI~~~~~ 265 (401)
T 1x13_A 241 FIKAEMELFAAQAKE----VDIIVTTALI 265 (401)
T ss_dssp HHHHHHHHHHHHHHH----CSEEEECCCC
T ss_pred HHHHHHHHHHHHhCC----CCEEEECCcc
Confidence 146777777 9999998644
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0075 Score=58.11 Aligned_cols=70 Identities=16% Similarity=0.257 Sum_probs=54.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+++|+|.|+ |.+|+.+++.+.+.|++|++++ .+.... .... .....+.+|..|.+.+.++++. +|
T Consensus 23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~------~~~a--d~~~~~~~~~~d~~~l~~~a~~----~d 88 (403)
T 3k5i_A 23 NSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPA------KQIS--AHDGHVTGSFKEREAVRQLAKT----CD 88 (403)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTT------GGGC--CSSCCEESCTTCHHHHHHHHTT----CS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcH------HHhc--cccceeecCCCCHHHHHHHHHh----CC
Confidence 4679999998 8999999999999999999999 643321 1111 1224577899999999999887 89
Q ss_pred EEEE
Q 043385 164 VVVS 167 (405)
Q Consensus 164 ~Vv~ 167 (405)
+|+-
T Consensus 89 ~i~~ 92 (403)
T 3k5i_A 89 VVTA 92 (403)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8874
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.012 Score=55.91 Aligned_cols=101 Identities=16% Similarity=0.231 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC-HHHHHHHHHhh-CC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN-LESLEKSLENL-GT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~~~-~~ 160 (405)
.+.+|||+|+ |.+|...++.+...|. +|+++++++++. +....+ +...+ .|..+ .+++.+.+... .+
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-------~~a~~l-Ga~~v-i~~~~~~~~~~~~v~~~~~~ 264 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF-------PKAKAL-GATDC-LNPRELDKPVQDVITELTAG 264 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-------HHHHHT-TCSEE-ECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-------HHHHHh-CCcEE-EccccccchHHHHHHHHhCC
Confidence 4679999996 9999999998888998 899999887654 222332 33322 24432 11222222211 12
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
++|+||+++|.. ......++.++.. -+++|.++.
T Consensus 265 g~Dvvid~~G~~------------~~~~~~~~~l~~~-~G~iv~~G~ 298 (376)
T 1e3i_A 265 GVDYSLDCAGTA------------QTLKAAVDCTVLG-WGSCTVVGA 298 (376)
T ss_dssp CBSEEEESSCCH------------HHHHHHHHTBCTT-TCEEEECCC
T ss_pred CccEEEECCCCH------------HHHHHHHHHhhcC-CCEEEEECC
Confidence 599999998741 1122334444333 148888775
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0041 Score=58.86 Aligned_cols=74 Identities=19% Similarity=0.227 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.+.+|||+|+ |.+|...++.+...|.+|+++++++++. +... .+ +...+ .|..+.+.+.+... ++
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~-------~~~~~~l-Ga~~v-i~~~~~~~~~~~~~----g~ 245 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKR-------EEALQDL-GADDY-VIGSDQAKMSELAD----SL 245 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHH-------HHHHTTS-CCSCE-EETTCHHHHHHSTT----TE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHH-------HHHHHHc-CCcee-eccccHHHHHHhcC----CC
Confidence 5689999996 9999999998888899999999987653 2222 22 22221 25556555554433 49
Q ss_pred cEEEEcccc
Q 043385 163 DVVVSCLAS 171 (405)
Q Consensus 163 d~Vv~~a~~ 171 (405)
|+||+++|.
T Consensus 246 D~vid~~g~ 254 (357)
T 2cf5_A 246 DYVIDTVPV 254 (357)
T ss_dssp EEEEECCCS
T ss_pred CEEEECCCC
Confidence 999999884
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0034 Score=55.09 Aligned_cols=72 Identities=21% Similarity=0.233 Sum_probs=53.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++++++|||.|| |-+|...++.|++.|++|++++..... .+..+....+++++..++.+.+ +++
T Consensus 28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~------~l~~l~~~~~i~~i~~~~~~~d-----L~~---- 91 (223)
T 3dfz_A 28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSA------EINEWEAKGQLRVKRKKVGEED-----LLN---- 91 (223)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCH------HHHHHHHTTSCEEECSCCCGGG-----SSS----
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCH------HHHHHHHcCCcEEEECCCCHhH-----hCC----
Confidence 467899999998 999999999999999999999875432 1233333346888887775432 345
Q ss_pred ccEEEEcc
Q 043385 162 IDVVVSCL 169 (405)
Q Consensus 162 ~d~Vv~~a 169 (405)
+|.||-+.
T Consensus 92 adLVIaAT 99 (223)
T 3dfz_A 92 VFFIVVAT 99 (223)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 89999543
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0073 Score=56.18 Aligned_cols=110 Identities=13% Similarity=0.065 Sum_probs=66.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhh--ccCCcEEEE-cCCCCHHHHHHHHHhhCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLN--QLQGASVCF-SDVTNLESLEKSLENLGT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~--~~~~v~~~~-~Dl~d~~~l~~~~~~~~~ 160 (405)
+|+|.|+|+ |.+|..++..|+..|+ +|++++++++............. ......+.. .| . +++++
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d---~----~a~~~--- 72 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDD---Y----ADISG--- 72 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESC---G----GGGTT---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCC---H----HHhCC---
Confidence 468999998 9999999999999998 99999998765432100000000 000112221 22 2 23556
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||-+++.... ...+....|....+.+++.+.+...+ .+|.+|
T Consensus 73 -aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s 121 (317)
T 2ewd_A 73 -SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT 121 (317)
T ss_dssp -CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred -CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 9999998875432 22334455777777777777665433 344444
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0037 Score=60.93 Aligned_cols=36 Identities=31% Similarity=0.576 Sum_probs=32.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
|+|.|.|+ |.+|..++..|++.|++|++++|++++.
T Consensus 1 mkI~VIG~-G~vG~~~A~~la~~G~~V~~~d~~~~~~ 36 (436)
T 1mv8_A 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKI 36 (436)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 57999985 9999999999999999999999987654
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0068 Score=56.06 Aligned_cols=83 Identities=17% Similarity=0.148 Sum_probs=56.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+..+++|+|.|++.-+|+.+++.|++.|.+|++++|+..+...... .+... .........++++++.+.+..
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~---~la~~-~~~~t~~~~t~~~~L~e~l~~---- 245 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE---SLKLN-KHHVEDLGEYSEDLLKKCSLD---- 245 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC---CSSCC-CCEEEEEEECCHHHHHHHHHH----
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHH---HHhhh-cccccccccccHhHHHHHhcc----
Confidence 5788999999998889999999999999999999887443221110 01110 011111111335779999998
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
+|+||.+.+..
T Consensus 246 ADIVIsAtg~p 256 (320)
T 1edz_A 246 SDVVITGVPSE 256 (320)
T ss_dssp CSEEEECCCCT
T ss_pred CCEEEECCCCC
Confidence 99999887754
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0038 Score=59.18 Aligned_cols=77 Identities=22% Similarity=0.283 Sum_probs=51.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
..+.+|||+|| |.+|...++.+... |++|+++++++++. +....+ +...+ .|..+. +.+.++...
T Consensus 185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~-------~~~~~l-Ga~~v-i~~~~~--~~~~v~~~~~g 252 (359)
T 1h2b_A 185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL-------KLAERL-GADHV-VDARRD--PVKQVMELTRG 252 (359)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH-------HHHHHT-TCSEE-EETTSC--HHHHHHHHTTT
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHH-------HHHHHh-CCCEE-Eeccch--HHHHHHHHhCC
Confidence 35679999999 99999999988888 99999999887653 223333 33222 255554 333222221
Q ss_pred CCccEEEEcccc
Q 043385 160 TSIDVVVSCLAS 171 (405)
Q Consensus 160 ~~~d~Vv~~a~~ 171 (405)
.++|+||+++|.
T Consensus 253 ~g~Dvvid~~G~ 264 (359)
T 1h2b_A 253 RGVNVAMDFVGS 264 (359)
T ss_dssp CCEEEEEESSCC
T ss_pred CCCcEEEECCCC
Confidence 259999999874
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0025 Score=60.51 Aligned_cols=75 Identities=20% Similarity=0.226 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+.+|||+|+ |.+|...++.+...|++|+++++++++. +....+ +...+ .|..+..++.+.+. +++|
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~-------~~~~~l-Ga~~v-~~~~~~~~~~~~~~---~~~D 245 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR-------EDAMKM-GADHY-IATLEEGDWGEKYF---DTFD 245 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH-------HHHHHH-TCSEE-EEGGGTSCHHHHSC---SCEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH-------HHHHHc-CCCEE-EcCcCchHHHHHhh---cCCC
Confidence 4679999999 9999999998888899999999988764 222222 22222 24433312222222 2499
Q ss_pred EEEEcccc
Q 043385 164 VVVSCLAS 171 (405)
Q Consensus 164 ~Vv~~a~~ 171 (405)
+||+++|.
T Consensus 246 ~vid~~g~ 253 (360)
T 1piw_A 246 LIVVCASS 253 (360)
T ss_dssp EEEECCSC
T ss_pred EEEECCCC
Confidence 99999885
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0046 Score=56.60 Aligned_cols=65 Identities=26% Similarity=0.329 Sum_probs=49.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|.|.|. |.+|..+++.|++.|++|++.+|++++. +.+... ++.. ..++.+++++ +|+|
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~-------~~~~~~-g~~~-------~~~~~~~~~~----aDvv 61 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKA-------EELAAL-GAER-------AATPCEVVES----CPVT 61 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG-------HHHHHT-TCEE-------CSSHHHHHHH----CSEE
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHH-------HHHHHC-CCee-------cCCHHHHHhc----CCEE
Confidence 68999997 9999999999999999999999998764 222221 3322 2345667777 8999
Q ss_pred EEccc
Q 043385 166 VSCLA 170 (405)
Q Consensus 166 v~~a~ 170 (405)
|-+..
T Consensus 62 i~~vp 66 (287)
T 3pef_A 62 FAMLA 66 (287)
T ss_dssp EECCS
T ss_pred EEEcC
Confidence 98764
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0053 Score=54.85 Aligned_cols=39 Identities=23% Similarity=0.402 Sum_probs=33.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
...+++|.|.|+ |.+|..+++.|++.|++|++.+|++++
T Consensus 16 ~~~~~kIgiIG~-G~mG~alA~~L~~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 16 YFQGMKIAVLGT-GTVGRTMAGALADLGHEVTIGTRDPKA 54 (245)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred ccCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 456789999975 999999999999999999999998764
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0071 Score=56.34 Aligned_cols=67 Identities=25% Similarity=0.400 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+|+|.|.|. |.+|..+++.|++.|++|++.+|++++. +.+... ++.. ..++.+++++ +|
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~-------~~l~~~-g~~~-------~~~~~e~~~~----aD 89 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARA-------ASLAAL-GATI-------HEQARAAARD----AD 89 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHH-------HHHHTT-TCEE-------ESSHHHHHTT----CS
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHH-------HHHHHC-CCEe-------eCCHHHHHhc----CC
Confidence 4579999987 9999999999999999999999987653 222222 3332 1235566776 99
Q ss_pred EEEEccc
Q 043385 164 VVVSCLA 170 (405)
Q Consensus 164 ~Vv~~a~ 170 (405)
+||-+..
T Consensus 90 vVi~~vp 96 (320)
T 4dll_A 90 IVVSMLE 96 (320)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 9998764
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0017 Score=60.51 Aligned_cols=75 Identities=19% Similarity=0.273 Sum_probs=51.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+.+|||+||+|.+|...++.+...|++|+++++... . +....+ +... ..|..+.+.+.+.+++ +
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~-------~~~~~l-Ga~~-~i~~~~~~~~~~~~~g----~ 216 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN-H-------AFLKAL-GAEQ-CINYHEEDFLLAISTP----V 216 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH-H-------HHHHHH-TCSE-EEETTTSCHHHHCCSC----E
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch-H-------HHHHHc-CCCE-EEeCCCcchhhhhccC----C
Confidence 45689999999999999999999999999998875432 1 222222 3322 2355554435554555 9
Q ss_pred cEEEEcccc
Q 043385 163 DVVVSCLAS 171 (405)
Q Consensus 163 d~Vv~~a~~ 171 (405)
|+||++.|.
T Consensus 217 D~v~d~~g~ 225 (321)
T 3tqh_A 217 DAVIDLVGG 225 (321)
T ss_dssp EEEEESSCH
T ss_pred CEEEECCCc
Confidence 999999873
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.021 Score=52.54 Aligned_cols=37 Identities=24% Similarity=0.434 Sum_probs=27.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIR 123 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~ 123 (405)
+||-++|- |..|..+++.|+++||+|++.+|++++..
T Consensus 6 ~kIgfIGL-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~ 42 (297)
T 4gbj_A 6 EKIAFLGL-GNLGTPIAEILLEAGYELVVWNRTASKAE 42 (297)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEC-------C
T ss_pred CcEEEEec-HHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 57999987 99999999999999999999999988753
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0033 Score=57.45 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=35.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCc
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGI 122 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~ 122 (405)
+..+++|+|+|+ |.+|+.++..|.+.|. +|+++.|+.++.
T Consensus 123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a 163 (281)
T 3o8q_A 123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKA 163 (281)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHH
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHH
Confidence 457889999998 8999999999999995 999999987654
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0037 Score=56.19 Aligned_cols=69 Identities=17% Similarity=0.364 Sum_probs=50.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
...+ +|+|.|+ |..|++++..|++.|. +|++++|++++.. .+.. ..... + .+++.+.+++
T Consensus 106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~-------~la~--~~~~~--~---~~~~~~~~~~--- 166 (253)
T 3u62_A 106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAK-------ALDF--PVKIF--S---LDQLDEVVKK--- 166 (253)
T ss_dssp CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHH-------TCCS--SCEEE--E---GGGHHHHHHT---
T ss_pred CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH-------HHHH--HcccC--C---HHHHHhhhcC---
Confidence 3467 8999998 9999999999999997 8999999876542 1111 12211 1 2446667777
Q ss_pred CccEEEEccc
Q 043385 161 SIDVVVSCLA 170 (405)
Q Consensus 161 ~~d~Vv~~a~ 170 (405)
+|+||++..
T Consensus 167 -aDiVInatp 175 (253)
T 3u62_A 167 -AKSLFNTTS 175 (253)
T ss_dssp -CSEEEECSS
T ss_pred -CCEEEECCC
Confidence 999999764
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.011 Score=56.10 Aligned_cols=103 Identities=17% Similarity=0.267 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC-HHHHHHHHHhhC-C
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN-LESLEKSLENLG-T 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~l~~~~~~~~-~ 160 (405)
.+.+|||+|+ |.+|...++.+...|. +|+++++++++. +....+ +...+ .|..+ .+++.+.++... +
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~-------~~~~~l-Ga~~v-i~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-------ARAKEF-GATEC-INPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-------HHHHHH-TCSEE-ECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-------HHHHHc-CCceE-eccccccccHHHHHHHHhCC
Confidence 4679999996 9999999998888898 899999887654 222222 22222 24432 122333333211 3
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
++|+||+++|.. ......++.++.. -+++|.++...
T Consensus 260 g~D~vid~~g~~------------~~~~~~~~~l~~~-~G~iv~~G~~~ 295 (373)
T 2fzw_A 260 GVDYSFECIGNV------------KVMRAALEACHKG-WGVSVVVGVAA 295 (373)
T ss_dssp CBSEEEECSCCH------------HHHHHHHHTBCTT-TCEEEECSCCC
T ss_pred CCCEEEECCCcH------------HHHHHHHHhhccC-CcEEEEEecCC
Confidence 599999998741 1123334444433 14888877543
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0048 Score=58.92 Aligned_cols=77 Identities=16% Similarity=0.330 Sum_probs=52.6
Q ss_pred CCCeEEEEc-CCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH---HHHHHHHHhhC
Q 043385 84 KDINILVVG-STGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL---ESLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~l~~~~~~~~ 159 (405)
.+.+|||.| |+|.+|...++.+...|++|+++++++++. +....+.--.++ |..+. +.+.++..+
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~-------~~~~~lGa~~~~--~~~~~~~~~~v~~~t~~-- 238 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA-------DLLKAQGAVHVC--NAASPTFMQDLTEALVS-- 238 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHH-------HHHHHTTCSCEE--ETTSTTHHHHHHHHHHH--
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHhCCCcEEE--eCCChHHHHHHHHHhcC--
Confidence 467899997 999999999998888899999999887653 223333211222 33333 334444433
Q ss_pred CCccEEEEcccc
Q 043385 160 TSIDVVVSCLAS 171 (405)
Q Consensus 160 ~~~d~Vv~~a~~ 171 (405)
.++|+||++.|.
T Consensus 239 ~g~d~v~d~~g~ 250 (379)
T 3iup_A 239 TGATIAFDATGG 250 (379)
T ss_dssp HCCCEEEESCEE
T ss_pred CCceEEEECCCc
Confidence 259999999885
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0076 Score=55.61 Aligned_cols=38 Identities=16% Similarity=0.256 Sum_probs=33.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
++|+|.|.|. |.+|..+++.|++.|++|++.+|++++.
T Consensus 6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~ 43 (303)
T 3g0o_A 6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQAC 43 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 4578999986 9999999999999999999999987653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 405 | ||||
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 1e-30 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 2e-22 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 2e-17 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 5e-16 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 3e-11 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 4e-11 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 7e-11 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 8e-11 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 1e-10 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 4e-10 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 1e-09 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 2e-09 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 3e-09 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-08 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 1e-08 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 5e-08 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 1e-07 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 1e-07 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 1e-07 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-07 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 3e-07 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 8e-07 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 8e-07 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 2e-06 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 3e-06 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 3e-06 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 4e-06 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 4e-06 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 5e-06 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 5e-06 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 6e-06 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 7e-06 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 8e-06 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 8e-06 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 8e-06 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 9e-06 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 1e-05 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 1e-05 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 1e-05 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 2e-05 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 2e-05 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 2e-05 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 2e-05 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 2e-05 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 3e-05 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 3e-05 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 3e-05 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 3e-05 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 6e-05 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 6e-05 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 8e-05 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 8e-05 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 8e-05 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 9e-05 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 1e-04 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-04 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 1e-04 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 1e-04 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 2e-04 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 2e-04 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 3e-04 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 4e-04 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 4e-04 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 4e-04 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 5e-04 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 5e-04 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 5e-04 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 5e-04 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 5e-04 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 6e-04 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 7e-04 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 8e-04 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 9e-04 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 0.001 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 0.001 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 0.001 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.001 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 0.002 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 0.003 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 0.004 |
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 118 bits (295), Expect = 1e-30
Identities = 45/352 (12%), Positives = 95/352 (26%), Gaps = 52/352 (14%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
I VVG+TG G ++ + G +V A + E L + ++ +
Sbjct: 5 TIAVVGATGRQGASLIRVAAAVGHHVRAQVH-----SLKGLIAEELQAIPNVTLFQGPLL 59
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
N L ++ L + S++G K +A + G + S
Sbjct: 60 NNVPL---MDTLFEGAHLAFINTTSQAGDEIAIGKDLADAA-------KRAGTIQHYIYS 109
Query: 207 AICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGK--- 263
++ + + ++ G + V + + + + +
Sbjct: 110 SMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMP 169
Query: 264 ------PYVMFGDGKLCAYCVL--------------SEDKINQILPIGGPGKALTPLEQG 303
D L + + + L+P++
Sbjct: 170 DGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFET--LSPVQVC 227
Query: 304 EILFRLLGKEPKFLKVPIGIMDFAIG-----VLDFLVKIFPSLEDA----AEFGKIGRYY 354
R L + +++VP + I L+ + +F + EF
Sbjct: 228 AAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFS--RPAA 285
Query: 355 AAESMLILDPETGEYSAEKTPSYGKDTLEEFFE-RVLREGMAGQELGEQTIF 405
+ L G + G + E R L G E + +F
Sbjct: 286 GSPKGLGPANGKGAGAGMMQGPGGVISQRVTDEARKLWSGWRDMEEYAREVF 337
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 94.5 bits (233), Expect = 2e-22
Identities = 50/324 (15%), Positives = 100/324 (30%), Gaps = 38/324 (11%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+L+VG TGYIGK +V +S G + R + + + GA + + + +
Sbjct: 6 VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD 65
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207
+ L +L+ + I + + A + G L S
Sbjct: 66 HQRLVDALKQVDVVISALAGG----------VLSHHILEQLKLVEAIKEAGNIKRFLPSE 115
Query: 208 ICVQKPLLEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFFKSLGGQVE-----LV 259
+ ++E + + Y+ V F G + ++
Sbjct: 116 FGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMM 175
Query: 260 KEGKPYVMFGD-------------GKLCAYCVLSEDKINQILPIGGPGKALTPLEQGEIL 306
+++GD G + +N+ + I P L+ E +I
Sbjct: 176 PPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIW 235
Query: 307 FRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPET 366
RL + + + DF + D + + G Y E + P
Sbjct: 236 ERLSEQNLDKIYISSQ--DFLADMKDKSYEEKIVRCHLYQIFFRGDLYNFE----IGPNA 289
Query: 367 GEYSAEKTPSYGKDTLEEFFERVL 390
E + + P T++ + ER +
Sbjct: 290 IEAT-KLYPEVKYVTMDSYLERYV 312
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.1 bits (191), Expect = 2e-17
Identities = 35/213 (16%), Positives = 72/213 (33%), Gaps = 21/213 (9%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
I + G+TG G + + V G+ V + R+ S + + A V DV
Sbjct: 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP--------RPAHVVVGDVL 56
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
++K++ D V+ L +R+ + E RN + A + G V +
Sbjct: 57 QAADVDKTVAG----QDAVIVLLGTRND--LSPTTVMSEGARNIVAAMKAHGVDKVVACT 110
Query: 207 AICVQKPLLEFQRAKLKFEAEMMKVAE--EDSGFTYSIVRPTAFF-KSLGGQVELVKEGK 263
+ + + + +++ + +SG Y V P + L G + +G+
Sbjct: 111 SAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGR 170
Query: 264 PYVMFGD----GKLCAYCVLSEDKINQILPIGG 292
G C+ +++
Sbjct: 171 GPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH 203
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 76.0 bits (185), Expect = 5e-16
Identities = 48/310 (15%), Positives = 107/310 (34%), Gaps = 15/310 (4%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ--GASVCFSDV 145
IL++G+TGYIG+ V + + G + RE + ++K + L + GA++ +
Sbjct: 6 ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASS-NSEKAQLLESFKASGANIVHGSI 64
Query: 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVA-GRNCGASHFVL 204
+ SL ++++N+ I V S + + K R G + H V
Sbjct: 65 DDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVE 124
Query: 205 LSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKP 264
+ + + + + + +G+ + +V ++ +G
Sbjct: 125 PAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNA 184
Query: 265 YVMFGD----GKLCAYCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVP 320
V+F G V +N+ L + P L+ E + + + K + VP
Sbjct: 185 RVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP 244
Query: 321 IGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKD 380
+ L+ P + + + + G +++ P
Sbjct: 245 -------EEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEIGPAGVEASQLYPDVKYT 297
Query: 381 TLEEFFERVL 390
T++E+ +
Sbjct: 298 TVDEYLSNFV 307
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.6 bits (149), Expect = 3e-11
Identities = 40/277 (14%), Positives = 80/277 (28%), Gaps = 57/277 (20%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
IL+ G G++G + ++L+ G V + +G + + ++
Sbjct: 3 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENF--------ELI 54
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGV-----KDSWKIDYEANRNSLVAGRNCGASH 201
N + +E +D + + S + K + N L + GA
Sbjct: 55 NHDVVEPLYIE----VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-R 109
Query: 202 FVLLSAICVQ-------------------KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSI 242
+L S V P + K E M + G +
Sbjct: 110 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE-TMCYAYMKQEGVEVRV 168
Query: 243 VRPTAFF---------KSLGGQVELVKEGKPYVMFGDGK----------LCAYCVLSEDK 283
R F + + + +G+P ++G G L V +
Sbjct: 169 ARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS 228
Query: 284 INQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVP 320
G + T LE +++ L+G + +
Sbjct: 229 NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLS 265
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 61.9 bits (149), Expect = 4e-11
Identities = 50/293 (17%), Positives = 91/293 (31%), Gaps = 67/293 (22%)
Query: 78 FRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQG 137
+ ++N K I + G+ G+I + L G VIA +K+ + + + +
Sbjct: 11 WPSENLK---ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLV-- 65
Query: 138 ASVCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNS------L 191
D+ +E+ K E +D V + A G N+ +
Sbjct: 66 ------DLRVMENCLKVTEG----VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMI 115
Query: 192 VAGRNCGASHFVLLSAICVQ---------------------KPLLEFQRAKLKFEAEMMK 230
A R G F S+ C+ +P F KL E E+ K
Sbjct: 116 EAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATE-ELCK 174
Query: 231 VAEEDSGFTYSIVRPTAFFKSLG------------GQVELVKEGKPYVMFGDGK------ 272
+D G I R + G + + M+GDG
Sbjct: 175 HYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFT 234
Query: 273 -----LCAYCVLSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVP 320
+ L++ + + I G + ++ E E++ K+ +P
Sbjct: 235 FIDECVEGVLRLTKSDFREPVNI-GSDEMVSMNEMAEMVLSFEEKKLPIHHIP 286
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 60.7 bits (146), Expect = 7e-11
Identities = 31/179 (17%), Positives = 65/179 (36%), Gaps = 23/179 (12%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+LV G +GYIG +L+ G +VI + + R E L + + D+
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG-KHPTFVEGDIR 60
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGV-----KDSWKIDYEANRNSLVAGRNCGASH 201
N + + L + ID V+ ++ G + + + + A R +
Sbjct: 61 NEALMTEILHDHA--IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN 118
Query: 202 FVLLSAICV---------------QKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRP 245
F+ S+ V P + ++KL E + + + ++ +++R
Sbjct: 119 FIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRY 177
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 60.2 bits (145), Expect = 8e-11
Identities = 46/269 (17%), Positives = 85/269 (31%), Gaps = 38/269 (14%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIA----IAREKSGIRGRNDKEETLNQLQGASVCF 142
+LV G G+IG V +L++ + + I + G ++
Sbjct: 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVH 61
Query: 143 SDVTNLESLEKSLENLGTSIDV-VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASH 201
D+ + L + L + + S + G + + + + L + G
Sbjct: 62 GDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGR 121
Query: 202 FVLLSAICV-----QKPLLEFQR-------AKLKFEAEMM-KVAEEDSGFTYSIVRPTAF 248
V +S V E A K ++++ + G I R
Sbjct: 122 VVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNN 181
Query: 249 F-------KSLGGQVELVKEGKPYVMFGDGK----------LCA--YCVLSEDKINQILP 289
+ K + V + +G ++GDG C VL+ + +I
Sbjct: 182 YGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYH 241
Query: 290 IGGPGKALTPLEQGEILFRLLGKEPKFLK 318
I G G LT E IL LG + ++
Sbjct: 242 I-GGGLELTNRELTGILLDSLGADWSSVR 269
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 59.1 bits (141), Expect = 1e-10
Identities = 39/247 (15%), Positives = 82/247 (33%), Gaps = 23/247 (9%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+LV G++G G+ V ++L +A +S +G+ + G +
Sbjct: 6 VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA-QGKEKIGGEADVFIGDITDADSINP 64
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAG--------RNCGA 199
+L L +++ + GG + D + G + G
Sbjct: 65 AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 124
Query: 200 SHFVLLSAICVQKPLLEFQRAKLKFEAEM---MKVAEEDSGFTYSIVRPTAFFKSLGGQV 256
H V++ ++ P + + DSG Y+I+R GG
Sbjct: 125 KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR 184
Query: 257 ELVKEGKPYVMFGDG---------KLCAYCVLSEDKINQILPIGGPGKAL-TPLEQ-GEI 305
EL+ ++ D ++C +L E+ N+ +G + TP + +
Sbjct: 185 ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKAL 244
Query: 306 LFRLLGK 312
++ +
Sbjct: 245 FSQVTSR 251
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 58.3 bits (140), Expect = 4e-10
Identities = 43/323 (13%), Positives = 93/323 (28%), Gaps = 47/323 (14%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI---RGRNDKEETLNQLQGASVCFSD 144
L+ G TG G ++ E L+ +G+ V I R S R + ++ + + D
Sbjct: 4 ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 63
Query: 145 VTNLESLEKSLENLGTSIDVVVSCLASRSGGVKD---SWKIDYEANRNSLVAGRNCGASH 201
+++ +L + L + + ++ + + + +D L A R G
Sbjct: 64 LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123
Query: 202 ---FVLLSAICV-----QKPLLE---------FQRAKLKFEAEMMKVAEEDSGFTYSIVR 244
F S + + P E + AKL + E G
Sbjct: 124 KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAY-WITVNYRESYGMYACNGI 182
Query: 245 PTAFF----------KSLGGQVELVKEGKPY-VMFGDGK-----------LCAYCVLSED 282
+ + + + +G + G+ + ++ +
Sbjct: 183 LFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ 242
Query: 283 KINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLE 342
+ + I G + + E+ LG + +F + + V +
Sbjct: 243 EQPEDFVIAT-GVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGD 301
Query: 343 DAAEFGKIGRYYAAESMLILDPE 365
A L+ DP
Sbjct: 302 VIIAVDPRYFRPAEVETLLGDPT 324
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 56.5 bits (135), Expect = 1e-09
Identities = 40/291 (13%), Positives = 76/291 (26%), Gaps = 43/291 (14%)
Query: 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGAS 139
PK L+ G G+IG ++E L+ V+ + +G + D+ +L + S
Sbjct: 13 PAQPK--VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWS 70
Query: 140 VCFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEAN----RNSLVAGR 195
++ +L+ V+ + N N L+A R
Sbjct: 71 NFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAAR 130
Query: 196 NCGASHFVLLSAICV-----QKPLLEFQRAK--------LKFEAEMMKVAEEDSGFTYSI 242
+ F ++ P +E K V GF+
Sbjct: 131 DAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 190
Query: 243 VRPT-----------AFFKSLGGQVELVKEGKPYVMFGDGK-------------LCAYCV 278
+R A+ + + +G + GDG+
Sbjct: 191 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 250
Query: 279 LSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIG 329
+ + G + + L L + DF G
Sbjct: 251 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREG 301
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (133), Expect = 2e-09
Identities = 22/122 (18%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+LV G+ IG+ V+ L + G V+A++R ++ + + + + G D+
Sbjct: 9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL------DSLVRECPGIEPVCVDLG 62
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206
+ E+ E++L ++G +D++V+ + ++ N A V
Sbjct: 63 DWEATERALGSVG-PVDLLVNN----AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQI 117
Query: 207 AI 208
Sbjct: 118 VA 119
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 54.6 bits (131), Expect = 3e-09
Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
LV G+ IG+ V+ L + G V+A+ R S D + G D+
Sbjct: 7 RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS------DLVSLAKECPGIEPVCVDLG 60
Query: 147 NLESLEKSLENLGTSIDVVVSCLA-SRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203
+ ++ EK+L +G +D++V+ A + K ++ + + + +
Sbjct: 61 DWDATEKALGGIG-PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVA 117
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 54.0 bits (129), Expect = 1e-08
Identities = 38/265 (14%), Positives = 78/265 (29%), Gaps = 63/265 (23%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
IL+ G G+IG VV ++ + + + +K G + +++ + +D+
Sbjct: 2 KILITGGAGFIGSAVVRHIIKNTQDTV-VNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 147 NLESLEKSLENLGTSIDVVVSCLASRSGGVKDS-------WKIDYEANRNSLVAGRNCGA 199
+ + + E D V+ A V S + + L R +
Sbjct: 61 DSAEITRIFEQ--YQPDAVMHLAAE--SHVDRSITGPAAFIETNIVGTYALLEVARKYWS 116
Query: 200 S---------HFVLLSAICVQKPLLEFQR----------------------AKLKFEAEM 228
+ F +S V L + K ++
Sbjct: 117 ALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDH 176
Query: 229 M-KVAEEDSGFTYSIVRPTAFF-------KSLGGQVELVKEGKPYVMFGDGK-------- 272
+ + G + + + K + + EGKP ++G G
Sbjct: 177 LVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236
Query: 273 ----LCAYCVLSEDKINQILPIGGP 293
+ V++E K + IGG
Sbjct: 237 EDHARALHMVVTEGKAGETYNIGGH 261
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 53.7 bits (127), Expect = 1e-08
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCF 142
P+ +LV G+ G++ VVE+L+ G+ V AR S + + + + +
Sbjct: 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVV 68
Query: 143 SDVTNLESLE 152
D+ + +
Sbjct: 69 EDMLKQGAYD 78
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 52.2 bits (123), Expect = 5e-08
Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 8/74 (10%)
Query: 78 FRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQG 137
++ K + V G TG+ G ++ L + G V + + ET G
Sbjct: 6 WQGKR-----VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF---ETARVADG 57
Query: 138 ASVCFSDVTNLESL 151
D+ + L
Sbjct: 58 MQSEIGDIRDQNKL 71
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 51.0 bits (121), Expect = 1e-07
Identities = 26/184 (14%), Positives = 52/184 (28%), Gaps = 50/184 (27%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+ + G G +G + +L RG + + ++ +
Sbjct: 5 VFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL----------------------NLLD 42
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGV------KDSWKIDYEANRNSLVAGRNCGASH 201
++ ID V A G V D + N + A +
Sbjct: 43 SRAVHDFFA--SERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNK 100
Query: 202 FVLLSAICV-----QKPLLEFQ--------------RAKLKFEAEMMKVAEEDSGFTYSI 242
+ L + C+ ++P+ E + AK+ ++ + G Y
Sbjct: 101 LLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGI-KLCESYNRQYGRDYRS 159
Query: 243 VRPT 246
V PT
Sbjct: 160 VMPT 163
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 50.9 bits (120), Expect = 1e-07
Identities = 16/109 (14%), Positives = 35/109 (32%), Gaps = 6/109 (5%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+L+ G G++G + +S+G ++I +G D L+ L D+ N
Sbjct: 3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSR--KGATDNLHWLSSLGNFEFVHGDIRN 60
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRN 196
+ + + D + + S ++ N
Sbjct: 61 KNDVTRLITK--YMPDSCFHL--AGQVAMTTSIDNPCMDFEINVGGTLN 105
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 50.6 bits (119), Expect = 1e-07
Identities = 11/56 (19%), Positives = 23/56 (41%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCF 142
IL+ G+ G +G+ + ++L + VI + I + N+ + V
Sbjct: 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVIN 58
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 50.0 bits (118), Expect = 2e-07
Identities = 35/237 (14%), Positives = 72/237 (30%), Gaps = 39/237 (16%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCF--SD 144
NI+V G G+IG V + + +V +K G + L + G V D
Sbjct: 4 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG---NKANLEAILGDRVELVVGD 60
Query: 145 VTNLESLEK-------------------SLEN----LGTSIDVVVSCLASRSGGVKDSWK 181
+ + E ++K SL + + T+ + L +
Sbjct: 61 IADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHH 120
Query: 182 IDYE---ANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGF 238
+ + + G +A P + K + ++K G
Sbjct: 121 VSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASD-LIVKAWVRSFGV 179
Query: 239 TYSIVRPTAFF-------KSLGGQVELVKEGKPYVMFGDGKLCAYCVLSEDKINQIL 288
+I + + K + Q+ + G ++G+GK + + D +
Sbjct: 180 KATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVW 236
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.7 bits (117), Expect = 3e-07
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 3/100 (3%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
+LV G GYIG V EL+ G++ + + + E L + D+ +
Sbjct: 4 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK-HHIPFYEVDLCD 62
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEAN 187
+ LEK + ID V+ ++ G + Y N
Sbjct: 63 RKGLEKVFKEYK--IDSVIHFAGLKAVGESTQIPLRYYHN 100
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 48.0 bits (112), Expect = 8e-07
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 22/82 (26%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
NIL+ G TG +G + L G N+IA+ G D +
Sbjct: 2 NILLFGKTGQVGWELQRSLAPVG-NLIALDVHSKEFCG-------------------DFS 41
Query: 147 NLESLEKSLENLGTSIDVVVSC 168
N + + +++ L DV+V+
Sbjct: 42 NPKGVAETVRKLR--PDVIVNA 61
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (113), Expect = 8e-07
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ 136
+LV G GYIG V EL+ G+ + I + RG E+L ++Q
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQ 53
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.3 bits (111), Expect = 2e-06
Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
LV G TG G ++ + L+ +G+ V + +S +E L D+ +
Sbjct: 3 ALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRE--LGIEGDIQYEDGDMAD 60
Query: 148 LESLEK 153
S+++
Sbjct: 61 ACSVQR 66
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 46.5 bits (108), Expect = 3e-06
Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 15/85 (17%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAI-------------AREKSGIRGRNDKEETLNQ 134
++V+G GY G L + + V + + I +D+
Sbjct: 4 VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63
Query: 135 LQGASVCF--SDVTNLESLEKSLEN 157
L G S+ D+ + E L +S ++
Sbjct: 64 LTGKSIELYVGDICDFEFLAESFKS 88
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.7 bits (108), Expect = 3e-06
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 11/112 (9%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
++V G IG +V V+ G V+ +++SG +L GA DVT
Sbjct: 9 VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG------RALEQELPGAVFILCDVTQ 62
Query: 148 LESLEKSLENL---GTSIDVVVSC--LASRSGGVKDSWKIDYEANRNSLVAG 194
+ ++ + +D VV+ +++ + + G
Sbjct: 63 EDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLG 114
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 45.8 bits (108), Expect = 4e-06
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS 143
KD +L+ G+ IG+ +E G ++A E+ + E + GA
Sbjct: 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPL------REAAEAV-GAHPVVM 56
Query: 144 DVTNLESLE----KSLENLGTSIDVVVSC 168
DV + S+E ++L +LG +D VV
Sbjct: 57 DVADPASVERGFAEALAHLG-RLDGVVHY 84
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 45.8 bits (107), Expect = 4e-06
Identities = 25/183 (13%), Positives = 50/183 (27%), Gaps = 24/183 (13%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS--- 143
L+ G TG G ++ E L+ +G+ V + R S + ++
Sbjct: 3 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62
Query: 144 -DVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKD---SWKIDYEANRNSLVAGRNCGA 199
D+T+ SL + ++ + ++ + + + + + L A R+
Sbjct: 63 ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 122
Query: 200 SHFVLLSAICV---------QKPLLE-------FQRAKLKFEAEMM-KVAEEDSGFTYSI 242
+ P E A K A E G
Sbjct: 123 DSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACN 182
Query: 243 VRP 245
Sbjct: 183 GIL 185
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.1 bits (105), Expect = 5e-06
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 78 FRNKNPKDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKS 120
FR +N + ++G++G G+ +++E++ +G V I R K
Sbjct: 10 FRMQNKS---VFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL 51
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.8 bits (104), Expect = 5e-06
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR 117
PK +L+ G+TG G+ +++ ++S IA
Sbjct: 2 PK--RVLLAGATGLTGEHLLDRILSEPTLAKVIAP 34
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 45.4 bits (105), Expect = 6e-06
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKE 129
I+V G G+IG +V+ L +G +++ + K G + N +
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD 44
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 45.1 bits (106), Expect = 7e-06
Identities = 18/121 (14%), Positives = 37/121 (30%), Gaps = 13/121 (10%)
Query: 75 TSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ 134
T+ ++K ++ G G IG+ + V G V+ +
Sbjct: 1 TNRLQDKV-----AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHG---QKVCNNIGS 52
Query: 135 LQGASVCFSDVTNLESLEK----SLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNS 190
S DVT E + ++ G +D++ + S + E +
Sbjct: 53 PDVISFVHCDVTKDEDVRNLVDTTIAKHGK-LDIMFGNVGVLSTTPYSILEAGNEDFKRV 111
Query: 191 L 191
+
Sbjct: 112 M 112
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 44.9 bits (105), Expect = 8e-06
Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 7/159 (4%)
Query: 89 LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL 148
++ G IG + L +GF V+ R G R E + A +C D++
Sbjct: 5 VITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLS 64
Query: 149 ESLEKSLENLGTS-------IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASH 201
SL E++ DV+V+ ++ A + +
Sbjct: 65 SSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFG 124
Query: 202 FVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTY 240
++ + + + Q + + + V T
Sbjct: 125 SNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTD 163
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 44.7 bits (105), Expect = 8e-06
Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 15/92 (16%)
Query: 77 SFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ 136
F +++ +LV G IG + + L + G V R L
Sbjct: 4 PFVSRS-----VLVTGGNRGIGLAIAQRLAADGHKVAVTHR----------GSGAPKGLF 48
Query: 137 GASVCFSDVTNLESLEKSLENLGTSIDVVVSC 168
G V +D ++ ++E ++V+VS
Sbjct: 49 GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 80
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 44.9 bits (104), Expect = 8e-06
Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 8/72 (11%)
Query: 87 NILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV 145
+L++G G+IG + E L+ + V + I R + ++G D+
Sbjct: 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAIS-RFLNHPHFHFVEG------DI 54
Query: 146 TNLESLEKSLEN 157
+ +
Sbjct: 55 SIHSEWIEYHVK 66
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 44.4 bits (105), Expect = 9e-06
Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 13/86 (15%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+LV G IG+ + + G V R + +E + GA D+
Sbjct: 7 GVLVTGGARGIGRAIAQAFAREGALVALCDL-------RPEGKEVAEAIGGAFFQV-DLE 58
Query: 147 NLES----LEKSLENLGTSIDVVVSC 168
+ +E++ LG +DV+V+
Sbjct: 59 DERERVRFVEEAAYALG-RVDVLVNN 83
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 44.2 bits (104), Expect = 1e-05
Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Query: 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQG----AS 139
K +LV G T IG +VEE G + AR + + E L++ Q +
Sbjct: 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYEL------NECLSKWQKKGFQVT 60
Query: 140 VCFSDVTNLESLEKSL----ENLGTSIDVVVSC 168
D + EK + G +D++++
Sbjct: 61 GSVCDASLRPEREKLMQTVSSMFGGKLDILINN 93
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 44.3 bits (104), Expect = 1e-05
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
LV G + IG +VEEL G V +R + + + SVC D+ +
Sbjct: 9 ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVC--DLLS 66
Query: 148 LESLEKSLEN----LGTSIDVVVSC 168
+K ++ ++++V+
Sbjct: 67 RTERDKLMQTVAHVFDGKLNILVNN 91
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 44.2 bits (104), Expect = 1e-05
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
LV G + IG +VEEL S G +V +R + + + + ASVC D+++
Sbjct: 11 ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVC--DLSS 68
Query: 148 LES----LEKSLENLGTSIDVVVSC 168
+ + ++++V+
Sbjct: 69 RSERQELMNTVANHFHGKLNILVNN 93
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (103), Expect = 2e-05
Identities = 20/119 (16%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
LV G+ IG+ E L+ +G V + + Q DV +
Sbjct: 6 ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 65
Query: 148 LESLEKSLENLGT---SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203
+ L + + +D++V+ + + +W+ + N S+++G G +
Sbjct: 66 QQQLRDTFRKVVDHFGRLDILVNNAGVNN---EKNWEKTLQINLVSVISGTYLGLDYMS 121
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (102), Expect = 2e-05
Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 78 FRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQG 137
+R++ LV G++G IG V LV +G V+ AR I + ++
Sbjct: 8 WRDRL-----ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT 62
Query: 138 ASVCFSDVTNLESLEK---SLENLGTSIDVVVSC 168
D++N E + ++ + + +D+ ++
Sbjct: 63 LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINN 96
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 43.5 bits (102), Expect = 2e-05
Identities = 20/121 (16%), Positives = 35/121 (28%), Gaps = 4/121 (3%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
++ G T IG + + V G V+ R T +Q+Q SD
Sbjct: 9 AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDG 68
Query: 148 LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207
L + E + +V+ +G + + + N F
Sbjct: 69 WTKLFDATEKAFGPVSTLVNN----AGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124
Query: 208 I 208
I
Sbjct: 125 I 125
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 43.6 bits (102), Expect = 2e-05
Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 5/89 (5%)
Query: 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS 143
D +L+ G +G+ L + G + + G+ +
Sbjct: 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62
Query: 144 DVTNLESL----EKSLENLGTSIDVVVSC 168
DV++ + + E G ID +
Sbjct: 63 DVSDEAQVEAYVTATTERFG-RIDGFFNN 90
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 43.1 bits (101), Expect = 2e-05
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 15/98 (15%)
Query: 77 SFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ 136
R + LV G + +G + + L G +V+ +R ++ + L +
Sbjct: 2 DLRGRV-----ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEA---SEAAQKLTEKY 53
Query: 137 GASVCF--SDVTNLESL----EKSLENLGTSIDVVVSC 168
G DV+N E + E E G +D VV+
Sbjct: 54 GVETMAFRCDVSNYEEVKKLLEAVKEKFG-KLDTVVNA 90
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 43.1 bits (101), Expect = 3e-05
Identities = 16/102 (15%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS-DV 145
+++ G +G + V+ G V+ + T +L A+ DV
Sbjct: 7 TVIITGGARGLGAEAARQAVAAGARVVLADVLDE------EGAATARELGDAARYQHLDV 60
Query: 146 TNLESLEKSLENLGT---SIDVVVSCLASRSGGVKDSWKIDY 184
T E ++ + S+D +V+ +G ++ ++
Sbjct: 61 TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVER 102
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 42.8 bits (100), Expect = 3e-05
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
Query: 77 SFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ 136
SF NK I+V G IG + + G NV I R + + E + +
Sbjct: 6 SFVNKT-----IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADA---VEVTEKVGKEF 57
Query: 137 GASVCF--SDVTNLESLEKSLENL 158
G DV+N + + K+++ +
Sbjct: 58 GVKTKAYQCDVSNTDIVTKTIQQI 81
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 42.5 bits (99), Expect = 3e-05
Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 7/82 (8%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
++V G G +G ++E G+ V+ I ND+ ++ + G
Sbjct: 4 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSA------NDQADSNILVDGNKNWTEQEQ 57
Query: 147 NLESLEKSLENLGTSIDVVVSC 168
++ S +D V
Sbjct: 58 SILEQTASSLQGS-QVDGVFCV 78
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (100), Expect = 3e-05
Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 27/183 (14%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI-RGRND---KEETLNQLQGASVCFS 143
L+ G TG G ++ E L+ +G+ V I R S GR + K + + +
Sbjct: 4 ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63
Query: 144 DVTNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEAN----RNSLVAGRNCGA 199
D+T+ L K + + ++ S D + + + L A + CG
Sbjct: 64 DLTDSTCLVKIINEVKP-TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGL 122
Query: 200 SH---FVLLSAICV-----QKPLLE---------FQRAKLKFEAEMMKVAEEDSGFTYSI 242
+ F S + + P E + AKL ++ E
Sbjct: 123 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAY-WIVVNFREAYNLFAVN 181
Query: 243 VRP 245
Sbjct: 182 GIL 184
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 41.8 bits (97), Expect = 6e-05
Identities = 43/252 (17%), Positives = 81/252 (32%), Gaps = 43/252 (17%)
Query: 82 NPKDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGAS 139
+P +++V G+ IG +V++LV ++IA AR +K L ++ +
Sbjct: 2 SPG--SVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR-------DVEKATELKSIKDSR 52
Query: 140 VCF--SDVTNLESLEKSLENL-----GTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLV 192
V VT +SL+ + + + ++++ A + + + L
Sbjct: 53 VHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINN-AGVLLSYGTNTEPNRAVIAEQL- 110
Query: 193 AGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL 252
N + QK L + A K + + V+ S + S
Sbjct: 111 -DVNTTSVVL------LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSG 163
Query: 253 GGQVELVKEGKPYVMFGDGKLCAYCVLSED------KINQILP------IGGPGKALTPL 300
Q ++ Y M L+ D + P +GG ALT
Sbjct: 164 SAQFPVL----AYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVE 219
Query: 301 EQGEILFRLLGK 312
+ L K
Sbjct: 220 QSTAELISSFNK 231
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 41.6 bits (97), Expect = 6e-05
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS-DV 145
ILV G+ IG+ ++ G +++A+ RE+ + E + L+ ++ DV
Sbjct: 7 TILVTGAASGIGRAALDLFAREGASLVAVDREERLL------AEAVAALEAEAIAVVADV 60
Query: 146 TNLESLEK----SLENLGTSIDVVVSC 168
++ +++E +LE G + V
Sbjct: 61 SDPKAVEAVFAEALEEFGR-LHGVAHF 86
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 41.6 bits (97), Expect = 8e-05
Identities = 14/108 (12%), Positives = 35/108 (32%), Gaps = 4/108 (3%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDK-EETLNQLQGASVCFSDVT 146
+++ GS+ IG+ G V R + + + + + + +DVT
Sbjct: 7 VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 66
Query: 147 NLESLEKSLENL---GTSIDVVVSCLASRSGGVKDSWKIDYEANRNSL 191
+ + ID++V+ + + E + +
Sbjct: 67 EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTF 114
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 41.4 bits (97), Expect = 8e-05
Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 11/90 (12%)
Query: 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS 143
KD ++ G IG+ + E G ++ + + E + L +
Sbjct: 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA-----PEAEAAIRNLGRRVLTVK 58
Query: 144 -DVTNLESLE----KSLENLGTSIDVVVSC 168
DV+ +E + + G D++V+
Sbjct: 59 CDVSQPGDVEAFGKQVISTFG-RCDILVNN 87
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 41.3 bits (96), Expect = 8e-05
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 89 LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS-DVTN 147
LV G+ IGK + LV GF V + +NQ G +V DV++
Sbjct: 5 LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATA---KAVASEINQAGGHAVAVKVDVSD 61
Query: 148 LESL----EKSLENLGTSIDVVVSCLASRSGGVKDSW 180
+ + E++ + LG DV+V+ +S
Sbjct: 62 RDQVFAAVEQARKTLG-GFDVIVNNAGVAPSTPIESI 97
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 41.6 bits (97), Expect = 9e-05
Identities = 14/103 (13%), Positives = 29/103 (28%), Gaps = 18/103 (17%)
Query: 89 LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS--DVT 146
+V + G L G V + ++L+ + +
Sbjct: 4 IVTNVKHFGGMGSALRLSEAGHTVACHDE----------SFKQKDELEAFAETYPQLKPM 53
Query: 147 NLES----LEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYE 185
+ + +E G +DV+VS + + K E
Sbjct: 54 SEQEPAELIEAVTSAYG-QVDVLVSN-DIFAPEFQPIDKYAVE 94
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 41.3 bits (96), Expect = 1e-04
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS-DVT 146
L+ GS IG+ E V G V T ++ A+ + DVT
Sbjct: 8 ALITGSARGIGRAFAEAYVREGARVAIADINLEAA------RATAAEIGPAACAIALDVT 61
Query: 147 NLESLE---KSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRN 189
+ S++ L + SID++V+ + + +I E+
Sbjct: 62 DQASIDRCVAELLDRWGSIDILVNN--AALFDLAPIVEITRESYDR 105
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 41.2 bits (96), Expect = 1e-04
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS 143
+D +LV+ ++ IG+ V + L G V AR EE L + G
Sbjct: 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR----------NEELLKRS-GHRYVVC 51
Query: 144 DVTNLESLEKSLENLGTSIDVVVSC 168
D+ + L+ E + +D++V
Sbjct: 52 DLR--KDLDLLFEKVK-EVDILVLN 73
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 41.1 bits (96), Expect = 1e-04
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAR-EKSGIRGRNDKEETLNQLQGASVCFSDV 145
+++ GS+ IG+ G NV R + R ++ + + +DV
Sbjct: 7 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 66
Query: 146 TNLESLEKSLENLGT---SIDVVVSC 168
T + ++ + + IDV+V+
Sbjct: 67 TTEDGQDQIINSTLKQFGKIDVLVNN 92
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 40.8 bits (95), Expect = 1e-04
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 17/95 (17%)
Query: 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQ------G 137
+ N++ V + G IG ELV R I R + L +L+
Sbjct: 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILD-------RVENPTALAELKAINPKVN 56
Query: 138 ASVCFSDVTN----LESLEKSLENLGTSIDVVVSC 168
+ DVT + L K + + ++D++++
Sbjct: 57 ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILING 91
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 40.5 bits (94), Expect = 2e-04
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 13/94 (13%)
Query: 89 LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQG----ASVCFSD 144
LV G+T IG + L G V AR + G+ TL +L+ A D
Sbjct: 6 LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGL------RTTLKELREAGVEADGRTCD 59
Query: 145 VTNLESLE---KSLENLGTSIDVVVSCLASRSGG 175
V ++ +E ++ +DV+V+ GG
Sbjct: 60 VRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGG 93
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 40.1 bits (93), Expect = 2e-04
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 17/102 (16%)
Query: 74 TTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN 133
++S K LV G+ IG+ + EL RG VI EE +
Sbjct: 12 QSASLEGKV-----ALVTGAGRGIGREMAMELGRRGCKVIVNYA-----NSTESAEEVVA 61
Query: 134 QLQG----ASVCFSDVTNLESLEKSLENLGT---SIDVVVSC 168
++ A+ ++V +E + + E +D+V S
Sbjct: 62 AIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSN 103
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 39.9 bits (93), Expect = 3e-04
Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAR-EKSGIRGRNDKEETLNQLQGASVCFSDVT 146
++ GS+ IG+ G V R + R Q + +DVT
Sbjct: 8 AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67
Query: 147 NLESLEKSLENLGT---SIDVVVSC 168
++ L +D++V+
Sbjct: 68 TDAGQDEILSTTLGKFGKLDILVNN 92
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 39.4 bits (91), Expect = 4e-04
Identities = 17/102 (16%), Positives = 42/102 (41%), Gaps = 9/102 (8%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCF--SDV 145
+V GST IG + L ++G +++ L G V + +D+
Sbjct: 7 AVVTGSTSGIGLGIATALAAQGADIVLNGF--GDAAEIEKVRAGLAAQHGVKVLYDGADL 64
Query: 146 TNLESL----EKSLENLGTSIDVVVSCLASRSGGVKDSWKID 183
+ E++ + ++ +G ID++V+ + + + + +
Sbjct: 65 SKGEAVRGLVDNAVRQMG-RIDILVNNAGIQHTALIEDFPTE 105
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 39.3 bits (91), Expect = 4e-04
Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 12/86 (13%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS-DVT 146
LV G +G V +V+ G V+ + +L A+ DVT
Sbjct: 9 ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG------KAMAAELADAARYVHLDVT 62
Query: 147 NLESL----EKSLENLGTSIDVVVSC 168
+ ++ G + V+V+
Sbjct: 63 QPAQWKAAVDTAVTAFG-GLHVLVNN 87
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 39.6 bits (92), Expect = 4e-04
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCF- 142
K +L+ G +G+ +V+ V+ G V + + ++ L G +V
Sbjct: 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDK-------SAERLAELETDHGDNVLGI 56
Query: 143 -SDVTNLESLEKSLE 156
DV +LE +++
Sbjct: 57 VGDVRSLEDQKQAAS 71
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 39.6 bits (92), Expect = 5e-04
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAR---EKSGIRGRNDKEETLNQLQG----ASV 140
+LV G+ G +G+ RG V+ K +G + ++ + +++ A
Sbjct: 10 VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69
Query: 141 CFSDVTNLESLEKSLENLGTSIDVVVSC 168
+ V E L K+ + IDVVV+
Sbjct: 70 NYDSVEAGEKLVKTALDTFGRIDVVVNN 97
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 39.3 bits (91), Expect = 5e-04
Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 13/124 (10%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQG----ASVCFS 143
L G+ IG+ + EL RG +V+ EE + +L+ +
Sbjct: 9 ALTTGAGRGIGRGIAIELGRRGASVVVNYG-----SSSKAAEEVVAELKKLGAQGVAIQA 63
Query: 144 DVTNLESLEKSLENLGT---SIDVVVSCLA-SRSGGVKDSWKIDYEANRNSLVAGRNCGA 199
D++ + + + +D V+S + + ++ N G+ A
Sbjct: 64 DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 123
Query: 200 SHFV 203
+
Sbjct: 124 QQGL 127
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 39.2 bits (91), Expect = 5e-04
Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS-DVT 146
LV G +G VV+ L+ G V ++ ++ +L S+ DV+
Sbjct: 9 ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG------QQLAAELGERSMFVRHDVS 62
Query: 147 NLESLEK---SLENLGTSIDVVVSC 168
+ +++ +++V+V+
Sbjct: 63 SEADWTLVMAAVQRRLGTLNVLVNN 87
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 39.0 bits (90), Expect = 5e-04
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASV 140
K+ + +++ GS+ +GK + + V+ R S N E + ++ G ++
Sbjct: 3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR--SKEDEANSVLEEIKKVGGEAI 60
Query: 141 CFS-DVTNLESLEK 153
DVT +
Sbjct: 61 AVKGDVTVESDVIN 74
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.0 bits (90), Expect = 5e-04
Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 2/104 (1%)
Query: 74 TTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN 133
FR + + ++V G++ IG+ + L G +V+ AR K ++ L
Sbjct: 3 LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 62
Query: 134 QLQGASV--CFSDVTNLESLEKSLENLGTSIDVVVSCLASRSGG 175
+ D+T E L +D+++ + +
Sbjct: 63 AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL 106
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (90), Expect = 6e-04
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDK-EETLNQLQGASVCF--SD 144
+V G IGK +V+EL+ G NV+ +R+ ++ D+ + L + A V +
Sbjct: 15 AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 74
Query: 145 VTNLESLEKSLENL 158
+ N E + +++
Sbjct: 75 IRNEEEVNNLVKST 88
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (89), Expect = 7e-04
Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVT 146
+L+ G+ IG+ E ++ K G+ K + L ++ V S+
Sbjct: 10 VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRE 69
Query: 147 NLESLEKSLENLGTSIDVVVSC 168
++ S K ++ + ++V+
Sbjct: 70 DIYSSAKKVKAEIGDVSILVNN 91
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 38.5 bits (89), Expect = 8e-04
Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQG-ASVCFSDVT 146
++ G+ IGK + + G +V+ N + + QL G A C D+T
Sbjct: 14 AIITGAGAGIGKEIAITFATAGASVVVSDINADAA---NHVVDEIQQLGGQAFACRCDIT 70
Query: 147 NLESLEK 153
+ + L
Sbjct: 71 SEQELSA 77
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 38.5 bits (89), Expect = 9e-04
Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS-DVT 146
LV G+ IG+ + + L +VI I+R + + + + S ++ DV+
Sbjct: 13 ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC---DSVVDEIKSFGYESSGYAGDVS 69
Query: 147 NLESLEKSLENL 158
E + + + +
Sbjct: 70 KKEEISEVINKI 81
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 38.5 bits (88), Expect = 0.001
Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 10/72 (13%)
Query: 73 ATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDK--EE 130
AT ++ +LV G TG +G + L RG + + G + E
Sbjct: 1 ATDDEWK----PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLV----SRSGPDADGAGE 52
Query: 131 TLNQLQGASVCF 142
+ +L+
Sbjct: 53 LVAELEALGART 64
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 38.2 bits (88), Expect = 0.001
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS-DVT 146
LV G+ G IG L G + + + + E ++ + + + DVT
Sbjct: 8 CLVTGAGGNIGLATALRLAEEGTAIALLDMNREAL---EKAEASVREKGVEARSYVCDVT 64
Query: 147 NLESLEK 153
+ E++
Sbjct: 65 SEEAVIG 71
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 38.2 bits (88), Expect = 0.001
Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 13/100 (13%)
Query: 56 STSSKRFNPITASTAVEATTSSFRNKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAI 115
+ SK F+P+ + +SF+ K + G +GK + L S G +
Sbjct: 4 ALQSKFFSPLQKAML---PPNSFQGKV-----AFITGGGTGLGKGMTTLLSSLGAQCVIA 55
Query: 116 AREKSGIRGRNDKEETLNQLQGASVCF--SDVTNLESLEK 153
+R+ + E ++ G V DV + + ++
Sbjct: 56 SRKMDVL---KATAEQISSQTGNKVHAIQCDVRDPDMVQN 92
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 38.2 bits (87), Expect = 0.001
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 87 NILVVGSTGYIGKFVVEELVSR-GFNVIAI 115
+LV G GYIG V L+ +V+ +
Sbjct: 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIV 33
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 37.5 bits (86), Expect = 0.002
Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 11/104 (10%)
Query: 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT 146
+LV G G +G V+ +R + V +I + E + + S
Sbjct: 4 RVLVYGGRGALGSRCVQAFRARNWWVASIDV---------VENEEASASVIVKMTDSFTE 54
Query: 147 NLESLEKSLENL--GTSIDVVVSCLASRSGGVKDSWKIDYEANR 188
+ + + L +D ++ +GG S + +
Sbjct: 55 QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDL 98
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 36.8 bits (84), Expect = 0.003
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 23/85 (27%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN 147
I++ G IG + L + G ++ I D E +D++
Sbjct: 4 IVISGCATGIGAATRKVLEAAGHQIVGI--------DIRDAEVI-----------ADLST 44
Query: 148 LESLEKSLE----NLGTSIDVVVSC 168
E ++++ +D +V C
Sbjct: 45 AEGRKQAIADVLAKCSKGMDGLVLC 69
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 36.3 bits (83), Expect = 0.004
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Query: 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCF--SDV 145
LV G++ IG+ + E L +RG VI A + + ++ GA+ +V
Sbjct: 7 ALVTGASRGIGRAIAETLAARGAKVIGTAT-------SENGAQAISDYLGANGKGLMLNV 59
Query: 146 TNLES 150
T+ S
Sbjct: 60 TDPAS 64
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 405 | |||
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.97 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.97 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.97 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.97 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.97 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.96 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.96 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.95 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.95 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.94 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.94 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.94 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.93 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.92 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.91 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.91 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.9 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.9 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.88 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.88 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.87 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.87 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.87 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.87 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.87 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.87 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.87 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.87 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.87 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.87 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.87 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.87 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.87 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.87 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.86 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.86 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.86 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.86 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.86 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.86 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.85 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.85 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.85 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.85 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.84 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.84 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.84 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.84 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.84 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.83 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.83 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.83 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.83 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.83 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.83 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.83 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.82 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.82 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.81 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.81 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.81 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.81 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.81 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.8 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.8 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.79 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.79 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.79 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.78 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.77 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.77 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.77 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.77 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.74 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.73 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.73 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.66 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.65 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.64 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.6 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.57 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.55 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.5 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.49 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.48 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.24 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.68 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.29 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.29 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.19 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.18 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.18 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 98.05 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 98.01 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.89 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.88 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.85 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.84 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.82 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.8 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.78 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.78 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.77 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.77 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.75 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.75 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.74 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.74 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.73 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.71 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.69 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.69 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.66 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.66 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.62 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.59 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.58 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.57 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.51 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.51 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.5 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.44 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.42 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.42 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.42 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.41 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.39 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.31 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.3 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.3 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.3 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.29 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.23 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.22 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.15 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 97.13 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.12 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.11 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.02 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.0 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.97 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.94 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.87 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 96.86 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.86 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.83 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.82 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 96.81 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 96.73 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.7 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 96.64 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.6 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.57 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.55 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.49 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 96.47 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.47 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 96.41 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.38 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.36 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 96.32 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.32 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 96.27 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.27 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.24 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.22 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.17 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.16 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.12 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.11 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.08 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.08 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.05 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.97 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.95 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.91 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 95.89 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 95.86 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.83 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.8 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.76 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.69 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.68 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 95.55 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.55 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 95.55 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 95.43 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 95.37 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.37 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.36 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.35 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 95.32 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.31 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.27 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 95.27 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.26 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 95.16 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.14 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.14 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 95.12 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 95.07 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.01 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.0 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 94.98 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.97 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 94.97 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.94 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 94.93 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 94.84 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 94.73 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.69 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 94.65 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 94.54 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.49 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 94.48 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 94.47 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.43 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.43 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 94.4 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 94.38 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 94.35 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.33 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 94.33 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.31 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 94.29 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 94.19 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 94.16 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.13 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 94.01 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 93.97 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 93.86 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 93.72 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 93.61 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 93.57 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.39 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 93.07 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 92.83 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 92.8 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 92.62 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 92.4 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 92.39 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 92.33 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 92.13 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 92.12 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 92.11 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 91.73 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 91.67 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 91.45 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 91.31 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 91.21 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 91.19 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 91.12 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 91.1 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 91.03 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 91.0 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.94 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 90.81 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 90.81 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 90.72 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 90.63 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 90.5 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 90.4 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 90.3 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 90.14 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 90.1 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 90.06 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 89.86 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 89.61 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 89.45 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 89.18 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 89.1 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 88.85 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 88.85 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 88.84 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 88.84 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 88.47 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 88.46 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 88.34 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 87.95 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 87.76 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 87.43 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 87.14 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 86.54 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 86.37 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 85.47 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 85.35 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 84.77 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.51 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 84.49 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 84.11 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 84.0 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 83.55 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 83.15 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 82.83 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 82.77 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 82.74 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 82.31 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 81.98 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 81.49 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 81.33 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 81.13 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 81.0 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 80.5 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 80.18 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 80.03 |
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.1e-34 Score=272.34 Aligned_cols=268 Identities=16% Similarity=0.234 Sum_probs=202.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|||||||||||||++|+++|+++|++|++++|............+.... .+++++++|++|.+.+.++++. .++|+|
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~l~~~~~~--~~~d~V 77 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG-KHPTFVEGDIRNEALMTEILHD--HAIDTV 77 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHT-SCCEEEECCTTCHHHHHHHHHH--TTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcC-CCCEEEEeecCCHHHHHHHHhc--cCCCEE
Confidence 6899999999999999999999999999999865443222111122222 5899999999999999999985 359999
Q ss_pred EEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---------------CCChhHHHHHHHHH
Q 043385 166 VSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---------------KPLLEFQRAKLKFE 225 (405)
Q Consensus 166 v~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---------------~~~~~y~~sK~~~E 225 (405)
||+|+... .++.+.+++|+.|+++++++|++.++++||++||..+| .|.+.|+.+|..+|
T Consensus 78 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e 157 (338)
T d1udca_ 78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVE 157 (338)
T ss_dssp EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHH
T ss_pred EECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhh
Confidence 99998643 23456889999999999999999999999999999887 35678999999999
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCchH-------------HHH----HHH-hCCCeEEecC------Ceeeehhhc--
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSLGG-------------QVE----LVK-EGKPYVMFGD------GKLCAYCVL-- 279 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~~~-------------~~~----~~~-~g~~~~~~g~------g~~~~~~~~-- 279 (405)
.++.+++.+..+++++++||+++|||... ++. .+. .+.++.+.|+ |.+.+++++
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~ 237 (338)
T d1udca_ 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHH
T ss_pred HHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEe
Confidence 99998776567999999999999997321 222 222 2346666664 555553222
Q ss_pred -------------ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhh
Q 043385 280 -------------SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAE 346 (405)
Q Consensus 280 -------------~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (405)
.....+++||+++. +.+|+.|+++.+.+.+|.+.++...+..
T Consensus 238 D~~~~~~~~~~~~~~~~~~~i~Ni~~~-~~~si~e~~~~i~~~~g~~~~~~~~~~~------------------------ 292 (338)
T d1udca_ 238 DLADGHVVAMEKLANKPGVHIYNLGAG-VGNSVLDVVNAFSKACGKPVNYHFAPRR------------------------ 292 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESCS-SCEEHHHHHHHHHHHHTSCCCEEEECCC------------------------
T ss_pred ehhhhccccccccccccCcceeeecCC-CCCcHHHHHHHHHHHHCCCCceEECCCC------------------------
Confidence 22334579999996 8999999999999999988777665532
Q ss_pred hhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 347 FGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 347 ~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
.+. ...+.+|.++++..|||+|.+ ++++.+++.++
T Consensus 293 ~~~-------~~~~~~d~~k~~~~lgwkp~~---~l~egi~~ti~ 327 (338)
T d1udca_ 293 EGD-------LPAYWADASKADRELNWRVTR---TLDEMAQDTWH 327 (338)
T ss_dssp TTC-------CSBCCBCCHHHHHHHCCCCCC---CHHHHHHHHHH
T ss_pred CCC-------CCEeeECHHHHHHHHCCCcCC---CHHHHHHHHHH
Confidence 000 012236888999999999954 45555555544
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.4e-34 Score=275.23 Aligned_cols=227 Identities=18% Similarity=0.124 Sum_probs=172.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC-CCchh--HhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG-RNDKE--ETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~--~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
|+|||||||||||++|+++|+++|++|++++|....... ..... ......++++++++|++|.+.+.++++++ ++
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~ 79 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--QP 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH--CC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc--CC
Confidence 689999999999999999999999999999996542210 00000 11122358999999999999999999983 46
Q ss_pred cEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCC---EEEEEcccccc--------------CCChhHHHH
Q 043385 163 DVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGAS---HFVLLSAICVQ--------------KPLLEFQRA 220 (405)
Q Consensus 163 d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~---~~V~~Ss~~~~--------------~~~~~y~~s 220 (405)
|+|||+|+... .++...+++|+.||.|++++|++.+++ ||||+||..+| .|.++|+.+
T Consensus 80 d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~s 159 (357)
T d1db3a_ 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA 159 (357)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHH
T ss_pred CEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHH
Confidence 99999998753 233457899999999999999998654 79999999887 356789999
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEecCCcccCch----------HHHHHHHhCC-CeEEecCCeeeehhhc----------
Q 043385 221 KLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG----------GQVELVKEGK-PYVMFGDGKLCAYCVL---------- 279 (405)
Q Consensus 221 K~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------~~~~~~~~g~-~~~~~g~g~~~~~~~~---------- 279 (405)
|.++|.+++.++. ..+++++++||+++|||.. .++..+..++ ....+|++.+.+++++
T Consensus 160 K~~~E~~~~~~~~-~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~ 238 (357)
T d1db3a_ 160 KLYAYWITVNYRE-SYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWM 238 (357)
T ss_dssp HHHHHHHHHHHHH-HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHH
Confidence 9999999999886 5689999999999999842 1233344444 4556788887762221
Q ss_pred -ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCe
Q 043385 280 -SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKF 316 (405)
Q Consensus 280 -~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~ 316 (405)
.+...+++||+++. +.+|+.|+++.+.+.+|...+.
T Consensus 239 ~~~~~~~~~yni~sg-~~~s~~~~~~~~~~~~g~~~~~ 275 (357)
T d1db3a_ 239 MLQQEQPEDFVIATG-VQYSVRQFVEMAAAQLGIKLRF 275 (357)
T ss_dssp TTSSSSCCCEEECCC-CCEEHHHHHHHHHHTTTEEEEE
T ss_pred HHhCCCCCeEEECCC-CceehHHHHHHHHHHhCCcccc
Confidence 23345789999985 8999999999999999865443
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.3e-33 Score=270.45 Aligned_cols=263 Identities=18% Similarity=0.208 Sum_probs=207.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
++|+|||||||||||++|+++|+++||+|++++|...... .......++..+|+.|.+.+.+++++ +|
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~----~d 81 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM--------TEDMFCDEFHLVDLRVMENCLKVTEG----VD 81 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS--------CGGGTCSEEEECCTTSHHHHHHHHTT----CS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch--------hhhcccCcEEEeechhHHHHHHHhhc----CC
Confidence 5689999999999999999999999999999998654321 12224678899999999999999988 99
Q ss_pred EEEEcccccCC------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---------------------CCChh
Q 043385 164 VVVSCLASRSG------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---------------------KPLLE 216 (405)
Q Consensus 164 ~Vv~~a~~~~~------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---------------------~~~~~ 216 (405)
+|||+|+.... .....+..|+.++.+++++|++.+++|||++||..+| .|.+.
T Consensus 82 ~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~ 161 (363)
T d2c5aa1 82 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDA 161 (363)
T ss_dssp EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSH
T ss_pred eEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCH
Confidence 99999976542 3445778999999999999999999999999999886 24568
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH------------HHHHHHhCCCeEEecCCeeeehhhcc----
Q 043385 217 FQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG------------QVELVKEGKPYVMFGDGKLCAYCVLS---- 280 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~------------~~~~~~~g~~~~~~g~g~~~~~~~~~---- 280 (405)
|+.+|.++|++++.+.+ ..|++++++||+.+||+... .........+...+|+|.+.+++++.
T Consensus 162 Yg~sK~~~E~~~~~~~~-~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~ 240 (363)
T d2c5aa1 162 FGLEKLATEELCKHYNK-DFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 240 (363)
T ss_dssp HHHHHHHHHHHHHHHHH-HHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHH
Confidence 99999999999998876 56999999999999997531 22334456677788999888733321
Q ss_pred -------cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhh
Q 043385 281 -------EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRY 353 (405)
Q Consensus 281 -------~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (405)
....+++||++++ +.+++.|+++.+.+.+|.+.++...|... +
T Consensus 241 ~~~~~~~~~~~~~~~ni~~~-~~~s~~~l~~~i~~~~g~~~~i~~~~~~~------------------------~----- 290 (363)
T d2c5aa1 241 EGVLRLTKSDFREPVNIGSD-EMVSMNEMAEMVLSFEEKKLPIHHIPGPE------------------------G----- 290 (363)
T ss_dssp HHHHHHHHSSCCSCEEECCC-CCEEHHHHHHHHHHTTTCCCCEEEECCCC------------------------C-----
T ss_pred HHHHHHHhCCCCCeEEEecC-CcccHHHHHHHHHHHhCCCCceEeCCCCC------------------------C-----
Confidence 2345789999986 89999999999999999988877665420 0
Q ss_pred hhhhhhcccCccccccccccCCccch----hhHHHHHHHHhhc
Q 043385 354 YAAESMLILDPETGEYSAEKTPSYGK----DTLEEFFERVLRE 392 (405)
Q Consensus 354 ~~~~~~~~~d~~~~~~~lg~~P~~~~----~~l~~~~~~~~~~ 392 (405)
......|.++++..|||+|.++. +.+.+|++++.+.
T Consensus 291 ---~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~~~~~ 330 (363)
T d2c5aa1 291 ---VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEK 330 (363)
T ss_dssp ---CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ---ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 01122588899999999997743 3455677666553
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=4.7e-34 Score=273.49 Aligned_cols=222 Identities=16% Similarity=0.203 Sum_probs=176.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|||||||||||++|+++|+++|++|++..++..... .......+...++++++.+|++|++.+.+++++. ++|+|
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--~~d~V 77 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAG-NLESLSDISESNRYNFEHADICDSAEITRIFEQY--QPDAV 77 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTC-CGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH--CCSEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccc-cHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC--CCCEE
Confidence 68999999999999999999999997555443322211 1111223333468999999999999999999873 58999
Q ss_pred EEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcC---------CCEEEEEcccccc--------------------
Q 043385 166 VSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCG---------ASHFVLLSAICVQ-------------------- 211 (405)
Q Consensus 166 v~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~---------v~~~V~~Ss~~~~-------------------- 211 (405)
||+|+... .++...+++|+.|+.+++++|++.+ +++|||+||..+|
T Consensus 78 ihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e 157 (361)
T d1kewa_ 78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTE 157 (361)
T ss_dssp EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCT
T ss_pred EECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCccc
Confidence 99998654 2456688999999999999998764 4599999999887
Q ss_pred ----CCChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeeehhhc-
Q 043385 212 ----KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCAYCVL- 279 (405)
Q Consensus 212 ----~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~~~~~- 279 (405)
.|.+.|+.+|..+|.++..++. ..+++++++||+.+|||.. .++..+..|+++.++|+|.+.+++++
T Consensus 158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~-~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v 236 (361)
T d1kewa_ 158 TTAYAPSSPYSASKASSDHLVRAWRR-TYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (361)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHH-HHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEH
Confidence 2346699999999999999886 5699999999999999853 45677788999999999998872222
Q ss_pred -----------ccccccceEeccCCCCCCCHHHHHHHHHHHcCC
Q 043385 280 -----------SEDKINQILPIGGPGKALTPLEQGEILFRLLGK 312 (405)
Q Consensus 280 -----------~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~ 312 (405)
.....+++|||++. +.+++.|+++.+.+.++.
T Consensus 237 ~D~a~ai~~~~~~~~~~~~~Ni~s~-~~~s~~~~~~~i~~~~~~ 279 (361)
T d1kewa_ 237 EDHARALHMVVTEGKAGETYNIGGH-NEKKNLDVVFTICDLLDE 279 (361)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEECCC-CEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCeEEECCC-CCcchHHHHhHhhhhccc
Confidence 23345789999985 899999999999887654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=3.2e-33 Score=263.52 Aligned_cols=263 Identities=19% Similarity=0.236 Sum_probs=200.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeE------EEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNV------IAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V------~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
|+|||||||||||++|++.|+++|++| +.+++...... ...........+++++.+|+.+...+......
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-- 76 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDAGLLARELRG-- 76 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCHHHHHHHTTT--
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhhhcCCCeEEEEeccccchhhhccccc--
Confidence 689999999999999999999999754 44443322111 11112233346899999999999988887776
Q ss_pred CCccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------------CCChhHHHH
Q 043385 160 TSIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------------KPLLEFQRA 220 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------------~~~~~y~~s 220 (405)
+|+|+|+|+... ....+.+++|+.|+.+++++|++.++++|||+||..+| .|.+.|+.+
T Consensus 77 --~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~s 154 (322)
T d1r6da_ 77 --VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAAS 154 (322)
T ss_dssp --CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHH
T ss_pred --cceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHH
Confidence 999999997653 24566789999999999999999999999999999987 356789999
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeeehhhc------------cc
Q 043385 221 KLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCAYCVL------------SE 281 (405)
Q Consensus 221 K~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~~~~~------------~~ 281 (405)
|..+|.+++.+++ +++++++++||+.+|||.. .++..+..++++.++|+|.+.+++++ ..
T Consensus 155 K~~~E~~~~~~~~-~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~ 233 (322)
T d1r6da_ 155 KAGSDLVARAYHR-TYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG 233 (322)
T ss_dssp HHHHHHHHHHHHH-HHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhC
Confidence 9999999999886 5799999999999999853 34677888999999999998873322 23
Q ss_pred ccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeee-cChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhc
Q 043385 282 DKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLK-VPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESML 360 (405)
Q Consensus 282 ~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (405)
...+++||+++. +.+++.|+++.+.+.+|.+..... .+.. .+ ....+
T Consensus 234 ~~~~~~~ni~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~~~------------------------~~-------~~~~~ 281 (322)
T d1r6da_ 234 GRAGEIYHIGGG-LELTNRELTGILLDSLGADWSSVRKVADR------------------------KG-------HDLRY 281 (322)
T ss_dssp CCTTCEEEECCC-CEEEHHHHHHHHHHHHTCCGGGEEEECCC------------------------TT-------CCCBC
T ss_pred CCCCCeeEEeec-ccchhHHHHHHHHHHhCCCccceeecCCC------------------------CC-------CCcee
Confidence 445789999985 899999999999999998744322 1110 00 01123
Q ss_pred ccCccccccccccCCccchhhHHHHHHHHh
Q 043385 361 ILDPETGEYSAEKTPSYGKDTLEEFFERVL 390 (405)
Q Consensus 361 ~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~ 390 (405)
.+|.++++..|||+|.+. +++-+++.+
T Consensus 282 ~~d~~k~~~~lg~~p~~~---~eegI~~~i 308 (322)
T d1r6da_ 282 SLDGGKIERELGYRPQVS---FADGLARTV 308 (322)
T ss_dssp CBCCHHHHHHHCCCCCSC---HHHHHHHHH
T ss_pred eeCHHHHHHHHCCCCCCC---HHHHHHHHH
Confidence 468888888999999653 444444444
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-34 Score=270.93 Aligned_cols=261 Identities=16% Similarity=0.212 Sum_probs=195.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|||||||||||||++|+++|+++|++|++++|....... ..........+++...|+.+. ++.+ +|+
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~-----~~~~----~d~ 68 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKR---NVEHWIGHENFELINHDVVEP-----LYIE----VDQ 68 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GTGGGTTCTTEEEEECCTTSC-----CCCC----CSE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHH---HHHHhcCCCceEEEehHHHHH-----HHcC----CCE
Confidence 3789999999999999999999999999999975432211 111222223556666665443 3344 999
Q ss_pred EEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-------------------CCChhHHHH
Q 043385 165 VVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ-------------------KPLLEFQRA 220 (405)
Q Consensus 165 Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~-------------------~~~~~y~~s 220 (405)
|||+|+... .++.+.+++|+.|+.+++++|++.++ ++||+||.++| .|.+.|+.+
T Consensus 69 VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~s 147 (312)
T d2b69a1 69 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEG 147 (312)
T ss_dssp EEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHH
T ss_pred EEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHH
Confidence 999998643 24455789999999999999999987 89999999887 245679999
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEecCCcccCc---------hHHHHHHHhCCCeEEecCCeeeehhhcc-----------
Q 043385 221 KLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL---------GGQVELVKEGKPYVMFGDGKLCAYCVLS----------- 280 (405)
Q Consensus 221 K~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~---------~~~~~~~~~g~~~~~~g~g~~~~~~~~~----------- 280 (405)
|.++|.+++.++. ..|++++++||+.+|||. ..++..+..|+++.++|+|.+.+++++.
T Consensus 148 K~~~E~~~~~~~~-~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~ 226 (312)
T d2b69a1 148 KRVAETMCYAYMK-QEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM 226 (312)
T ss_dssp HHHHHHHHHHHHH-HHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHH
Confidence 9999999998876 579999999999999974 2356777889999999999887733221
Q ss_pred cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhc
Q 043385 281 EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESML 360 (405)
Q Consensus 281 ~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (405)
+...+++||+++. +.+++.|+++.+.+.+|.+.++...+... +.. ...
T Consensus 227 ~~~~~~~~n~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------------------------~~~-------~~~ 274 (312)
T d2b69a1 227 NSNVSSPVNLGNP-EEHTILEFAQLIKNLVGSGSEIQFLSEAQ------------------------DDP-------QKR 274 (312)
T ss_dssp TSSCCSCEEESCC-CEEEHHHHHHHHHHHHTCCCCEEEECCCT------------------------TCC-------CCC
T ss_pred hhccCCceEecCC-cccchhhHHHHHHHHhCCCCceEECCCCC------------------------CCC-------Cee
Confidence 2345789999985 89999999999999999887765544210 101 112
Q ss_pred ccCccccccccccCCccch----hhHHHHHHHHhh
Q 043385 361 ILDPETGEYSAEKTPSYGK----DTLEEFFERVLR 391 (405)
Q Consensus 361 ~~d~~~~~~~lg~~P~~~~----~~l~~~~~~~~~ 391 (405)
..|.++++..+||+|.+.. +.+-+|+++.++
T Consensus 275 ~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~~~ 309 (312)
T d2b69a1 275 KPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 309 (312)
T ss_dssp CBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred eECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 3578888889999997643 234455555443
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.5e-33 Score=264.09 Aligned_cols=258 Identities=17% Similarity=0.201 Sum_probs=185.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|||||||||||++|+++|+++|++|+++++................ ..+++++.+|++|.+.+.++++. .++|+|
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~--~~~d~V 78 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKE--YKIDSV 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHH--SCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc-ccCCeEEEeecCCHHHHHHHHhc--cCCCEE
Confidence 579999999999999999999999999999875443211111111122 25899999999999999999986 359999
Q ss_pred EEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc------------------CCChhHHHHHH
Q 043385 166 VSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ------------------KPLLEFQRAKL 222 (405)
Q Consensus 166 v~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~------------------~~~~~y~~sK~ 222 (405)
||+|+.... .+...+.+|+.|+.+++++|++.+++|||++||..+| .|.++|+.+|.
T Consensus 79 ihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~ 158 (347)
T d1z45a2 79 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY 158 (347)
T ss_dssp EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred EEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHH
Confidence 999997532 3345788999999999999999999999999998887 24577999999
Q ss_pred HHHHHHHHHhhh-cCCceEEEEecCCcccCch-------------HHH---HHHH--hCCCeEEecCCeeee------hh
Q 043385 223 KFEAEMMKVAEE-DSGFTYSIVRPTAFFKSLG-------------GQV---ELVK--EGKPYVMFGDGKLCA------YC 277 (405)
Q Consensus 223 ~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~~-------------~~~---~~~~--~g~~~~~~g~g~~~~------~~ 277 (405)
.+|++++.+... ..+++++++||+.+||+.. .++ .... .+.++.++|++.+.+ ++
T Consensus 159 ~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~ 238 (347)
T d1z45a2 159 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY 238 (347)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECE
T ss_pred HHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeee
Confidence 999999887653 5789999999999998531 122 1222 345566677665433 21
Q ss_pred hc-------------------ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhc
Q 043385 278 VL-------------------SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIF 338 (405)
Q Consensus 278 ~~-------------------~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~ 338 (405)
+. .....+++||+++. +++|+.|+++.+.+.+|.+.++...+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~~~--------------- 302 (347)
T d1z45a2 239 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG-KGSTVFEVYHAFCKASGIDLPYKVTGRRA--------------- 302 (347)
T ss_dssp EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS-CCEEHHHHHHHHHHHHTCCCCC----------------------
T ss_pred eeeecccccccccccccccccccccccccceecCC-CcccHHHHHHHHHHHHCCCCceEeCCCCC---------------
Confidence 11 12335689999985 89999999999999999876654332210
Q ss_pred cchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccc
Q 043385 339 PSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYG 378 (405)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~ 378 (405)
+.. .....|.++++.+|||+|.+.
T Consensus 303 ---------~~~-------~~~~~d~sk~~~~lGw~p~~~ 326 (347)
T d1z45a2 303 ---------GDV-------LNLTAKPDRAKRELKWQTELQ 326 (347)
T ss_dssp -----------C-------CCCCBCCHHHHHHTCCCCCCC
T ss_pred ---------CCC-------CEeeECHHHHHHHHCCCCCCC
Confidence 101 112257888999999999654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4e-33 Score=264.85 Aligned_cols=223 Identities=19% Similarity=0.303 Sum_probs=176.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHH-HHHhhCCCcc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEK-SLENLGTSID 163 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~-~~~~~~~~~d 163 (405)
|||||||||||||++|+++|+++| ++|+++++..... ..+...++++++.+|+++.+.+.+ ++++ +|
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~-------~~~~~~~~~~~i~~Di~~~~~~~~~~~~~----~d 69 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAI-------SRFLNHPHFHFVEGDISIHSEWIEYHVKK----CD 69 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGG-------GGGTTCTTEEEEECCTTTCSHHHHHHHHH----CS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcch-------hhhccCCCeEEEECccCChHHHHHHHHhC----CC
Confidence 689999999999999999999999 5899998865433 223334689999999988766555 6666 99
Q ss_pred EEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---------------------CCChhH
Q 043385 164 VVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---------------------KPLLEF 217 (405)
Q Consensus 164 ~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---------------------~~~~~y 217 (405)
+|||+|+.... .+...+++|+.|+.+++++|.+.++ +++++||..+| .|...|
T Consensus 70 ~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y 148 (342)
T d2blla1 70 VVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIY 148 (342)
T ss_dssp EEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHH
T ss_pred ccccccccccccccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchh
Confidence 99999997542 3345789999999999999999987 55678887765 234679
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCc---------------hHHHHHHHhCCCeEEecCCeeeehh-----
Q 043385 218 QRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL---------------GGQVELVKEGKPYVMFGDGKLCAYC----- 277 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~---------------~~~~~~~~~g~~~~~~g~g~~~~~~----- 277 (405)
+.+|..+|+++..+++ ..+++++++||+.+||+. ..++..+..|+++.++|+|.+.+++
T Consensus 149 ~~sK~~~E~~~~~~~~-~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D 227 (342)
T d2blla1 149 SVSKQLLDRVIWAYGE-KEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 227 (342)
T ss_dssp HHHHHHHHHHHHHHHH-HHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHH
T ss_pred hhcccchhhhhhhhhc-ccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccccc
Confidence 9999999999998887 579999999999999962 2345677889999999999987721
Q ss_pred --------hcc--cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecCh
Q 043385 278 --------VLS--EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPI 321 (405)
Q Consensus 278 --------~~~--~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~ 321 (405)
+.. ....+++||+++++..+|+.|+++.+.+.+|........|.
T Consensus 228 ~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~ 281 (342)
T d2blla1 228 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPP 281 (342)
T ss_dssp HHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCC
T ss_pred ccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCc
Confidence 122 23457899998642458999999999999998766655553
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.3e-32 Score=261.37 Aligned_cols=224 Identities=19% Similarity=0.172 Sum_probs=179.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhH---hhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEE---TLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~---~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
++|+|||||||||||++|+++|+++|++|++++|............. ......+++++.+|+.|...+.....+
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~--- 91 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAG--- 91 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTT---
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccc---
Confidence 45799999999999999999999999999999985432210000000 111225789999999999998888877
Q ss_pred CccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------------CCChhHHHHH
Q 043385 161 SIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------------KPLLEFQRAK 221 (405)
Q Consensus 161 ~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------------~~~~~y~~sK 221 (405)
.++|+|+++... .++...+++|+.|+.+++++|.+.++++|||+||..+| .|.+.|+.+|
T Consensus 92 -~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK 170 (341)
T d1sb8a_ 92 -VDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTK 170 (341)
T ss_dssp -CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHH
T ss_pred -ccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHH
Confidence 999999887543 24455789999999999999999999999999999987 3568899999
Q ss_pred HHHHHHHHHHhhhcCCceEEEEecCCcccCch-----------HHHHHHHhCCCeEEecCCeeeehhhc-----------
Q 043385 222 LKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-----------GQVELVKEGKPYVMFGDGKLCAYCVL----------- 279 (405)
Q Consensus 222 ~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-----------~~~~~~~~g~~~~~~g~g~~~~~~~~----------- 279 (405)
..+|.++..+++ ..+++++++||+.+||+.. .++..+..|+++.++|+|.+.+++++
T Consensus 171 ~~~E~~~~~~~~-~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~ 249 (341)
T d1sb8a_ 171 YVNELYADVFSR-CYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLA 249 (341)
T ss_dssp HHHHHHHHHHHH-HHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhh
Confidence 999999998876 5789999999999999742 24566778999999999988772221
Q ss_pred ---ccccccceEeccCCCCCCCHHHHHHHHHHHcCCC
Q 043385 280 ---SEDKINQILPIGGPGKALTPLEQGEILFRLLGKE 313 (405)
Q Consensus 280 ---~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~ 313 (405)
.....+++||+++. +.+|+.|+++.+.+.++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~-~~~si~~i~~~i~~~~~~~ 285 (341)
T d1sb8a_ 250 ATAGLDARNQVYNIAVG-GRTSLNQLFFALRDGLAEN 285 (341)
T ss_dssp HTCCGGGCSEEEEESCS-CCEEHHHHHHHHHHHHHHT
T ss_pred hhccccccceeeeeccc-ccchHHHHHHHHHHHhccc
Confidence 12345789999985 8999999999999998754
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.7e-32 Score=261.06 Aligned_cols=266 Identities=17% Similarity=0.194 Sum_probs=200.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|+|||||||||||++|+++|+++|++|.++.++............... ..+++++.+|++|.+.+..++++ .|.
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~Di~d~~~~~~~~~~----~~~ 76 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAAK----ADA 76 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHTT----CSE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh-cCCeEEEEccCCCHHHHHHHHhh----hhh
Confidence 6899999999999999999999999887766664322111111111222 25899999999999999999988 999
Q ss_pred EEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------------------------CC
Q 043385 165 VVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------------------------KP 213 (405)
Q Consensus 165 Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------------------------~~ 213 (405)
|+|+|+... .++.+.+++|+.|+.+++++++..+. ++|++||..+| .|
T Consensus 77 v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p 155 (346)
T d1oc2a_ 77 IVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNP 155 (346)
T ss_dssp EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred hhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCCCCC
Confidence 999988653 24567889999999999999999985 78889888776 24
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------HHHHHHHhCCCeEEecCCeeeehhh--------
Q 043385 214 LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------GQVELVKEGKPYVMFGDGKLCAYCV-------- 278 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~~~~~~~~g~~~~~~g~g~~~~~~~-------- 278 (405)
.+.|+.+|.++|.+++.++. ..+++++++||+.+|||.. .++..+..+.++.++|+|.+.++++
T Consensus 156 ~s~Y~~sK~~~E~~~~~~~~-~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a 234 (346)
T d1oc2a_ 156 SSPYSSTKAASDLIVKAWVR-SFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTG 234 (346)
T ss_dssp CSHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH-HcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHH
Confidence 57799999999999998876 5799999999999999852 2455667888888999999887322
Q ss_pred ----cccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCC-eeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhh
Q 043385 279 ----LSEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPK-FLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRY 353 (405)
Q Consensus 279 ----~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (405)
......++.||+++. +..++.++++.+.+.+|.+.. +...+.. .+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------------------------~~~~~-- 287 (346)
T d1oc2a_ 235 VWAILTKGRMGETYLIGAD-GEKNNKEVLELILEKMGQPKDAYDHVTDR------------------------AGHDL-- 287 (346)
T ss_dssp HHHHHHHCCTTCEEEECCS-CEEEHHHHHHHHHHHTTCCTTCSEEECCC------------------------TTCCC--
T ss_pred HHHHHhhcccCcccccccc-ccccchHHHHHHHHHhCCCCcceEECCCC------------------------CCCCc--
Confidence 234566789999986 899999999999999987643 3222211 01111
Q ss_pred hhhhhhcccCccccccccccCCccc-h----hhHHHHHHHH
Q 043385 354 YAAESMLILDPETGEYSAEKTPSYG-K----DTLEEFFERV 389 (405)
Q Consensus 354 ~~~~~~~~~d~~~~~~~lg~~P~~~-~----~~l~~~~~~~ 389 (405)
....|.++++..|||.|.+. . +.+.+|++++
T Consensus 288 -----~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n 323 (346)
T d1oc2a_ 288 -----RYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN 323 (346)
T ss_dssp -----BCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred -----eeeeCHHHHHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence 12258888999999999763 3 2344555553
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-31 Score=254.01 Aligned_cols=270 Identities=17% Similarity=0.219 Sum_probs=201.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCC---chhHhh--hccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRN---DKEETL--NQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~---~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+||||||||||||++|+++|+++|++|++++|......... ...... ....++.++.+|++|.+.+.+++.+ .
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--~ 80 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--Y 80 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--C
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc--c
Confidence 68999999999999999999999999999987433222111 111111 1235899999999999999999988 4
Q ss_pred CccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---------------CCChhHHHH
Q 043385 161 SIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---------------KPLLEFQRA 220 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---------------~~~~~y~~s 220 (405)
++|+++|+|+.... .+.+.+++|+.|+.++++++++.++++|||+||..+| .+.++|+.+
T Consensus 81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~ 160 (346)
T d1ek6a_ 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS 160 (346)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHH
Confidence 67889999996542 3456789999999999999999999999999999886 345689999
Q ss_pred HHHHHHHHHHHhhhcCCceEEEEecCCcccCchH-------------HH----H-HHHhCCCeEEec------CCeeeeh
Q 043385 221 KLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG-------------QV----E-LVKEGKPYVMFG------DGKLCAY 276 (405)
Q Consensus 221 K~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~-------------~~----~-~~~~g~~~~~~g------~g~~~~~ 276 (405)
|..+|+.+.++++...+++++++||+.+||+... ++ . ....+.++.++| +|.+.++
T Consensus 161 k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rd 240 (346)
T d1ek6a_ 161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240 (346)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred HHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEe
Confidence 9999999998876557999999999999997321 12 2 222355666554 3555552
Q ss_pred hhc---------------ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccch
Q 043385 277 CVL---------------SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSL 341 (405)
Q Consensus 277 ~~~---------------~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 341 (405)
+++ .....+++|||++. +.+++.|+++.+.+.+|.+.++...|...
T Consensus 241 fi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~-~~~s~~dl~~~i~~~~~~~~~~~~~~~~~------------------ 301 (346)
T d1ek6a_ 241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTG-TGYSVLQMVQAMEKASGKKIPYKVVARRE------------------ 301 (346)
T ss_dssp EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCS-CCEEHHHHHHHHHHHHCSCCCEEEECCCT------------------
T ss_pred EEEEEeccchhhhhccccccccCceEEEeCCC-CcccHHHHHHHHHHHhCCCCCeEECCCCC------------------
Confidence 221 12344679999985 89999999999999999988776655320
Q ss_pred hhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhhc
Q 043385 342 EDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLRE 392 (405)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~~ 392 (405)
+.. .....|.+++++.|||+|.+ +++|.+++.++.
T Consensus 302 ------~e~-------~~~~~d~~k~~~~lgw~p~~---slee~I~~~i~w 336 (346)
T d1ek6a_ 302 ------GDV-------AACYANPSLAQEELGWTAAL---GLDRMCEDLWRW 336 (346)
T ss_dssp ------TCC-------SEECBCCHHHHHTTCCCCCC---CHHHHHHHHHHH
T ss_pred ------CCC-------CEeeECHHHHHHHHCCCcCC---CHHHHHHHHHHH
Confidence 111 11225788899999999954 566666666654
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=4.9e-31 Score=255.20 Aligned_cols=272 Identities=15% Similarity=0.162 Sum_probs=189.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC----------CCCcCCCCchhHh---h--hccCCcEEEEcCCCCHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIARE----------KSGIRGRNDKEET---L--NQLQGASVCFSDVTNLE 149 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~----------~~~~~~~~~~~~~---~--~~~~~v~~~~~Dl~d~~ 149 (405)
||||||||||||||++|+++|+++||+|++++.- ............. . ....+++++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 5899999999999999999999999999999721 1111111111111 1 11257999999999999
Q ss_pred HHHHHHHhhCCCccEEEEcccccCC-----C---CcchhHhHHHHHHHHHHHHHhcCCC-EEEEEcccccc---------
Q 043385 150 SLEKSLENLGTSIDVVVSCLASRSG-----G---VKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAICVQ--------- 211 (405)
Q Consensus 150 ~l~~~~~~~~~~~d~Vv~~a~~~~~-----~---~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~~~~--------- 211 (405)
.+.++++++ ++|+|||+|+.... + ....+++|+.||.+++++|++.+++ ++|+.||..+|
T Consensus 81 ~l~~~~~~~--~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~ 158 (393)
T d1i24a_ 81 FLAESFKSF--EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE 158 (393)
T ss_dssp HHHHHHHHH--CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred HHHHHHHhh--cchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccc
Confidence 999999983 57999999986431 1 2246789999999999999998865 67778877654
Q ss_pred ------------------CCChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCc---------------------
Q 043385 212 ------------------KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL--------------------- 252 (405)
Q Consensus 212 ------------------~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~--------------------- 252 (405)
.|.+.|+.+|..+|.++..+++ ..+++++++||+.+|||.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~-~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (393)
T d1i24a_ 159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCK-AWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG 237 (393)
T ss_dssp SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred ccccccccccccccccccccccHHHHHhhhhccccccccc-ccceeeeecccccccCCCccccccccccccccccccccc
Confidence 3446799999999999998776 679999999999999974
Q ss_pred ---hHHHHHHHhCCCeEEecCCeeeehhhc-------------ccccccceEeccCCCCCCCHHHHHHHHHHHc---CCC
Q 043385 253 ---GGQVELVKEGKPYVMFGDGKLCAYCVL-------------SEDKINQILPIGGPGKALTPLEQGEILFRLL---GKE 313 (405)
Q Consensus 253 ---~~~~~~~~~g~~~~~~g~g~~~~~~~~-------------~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~---g~~ 313 (405)
..++.....+.++.++|++.+.+++++ .....+..+.+.+.++.+++.|+++.+.+.. |..
T Consensus 238 ~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~ 317 (393)
T d1i24a_ 238 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLD 317 (393)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCC
T ss_pred cchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCC
Confidence 234566778999999999998773322 2233333322211126789999999998875 444
Q ss_pred CCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccch----hhHHHHHHHH
Q 043385 314 PKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGK----DTLEEFFERV 389 (405)
Q Consensus 314 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~----~~l~~~~~~~ 389 (405)
+.....+.+. .. .....+..|.++++ .|||+|.+.. +++.+|++++
T Consensus 318 ~~~~~~~~~~-----------------------~~------~~~~~~~~d~~k~~-~LGw~P~~~~~~~i~~~~~~~~~~ 367 (393)
T d1i24a_ 318 VKKMTVPNPR-----------------------VE------AEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQF 367 (393)
T ss_dssp CCEEEECCSS-----------------------CS------CSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred cceeeccCCC-----------------------CC------CCccEecCCHHHHH-HcCCccccCHHHHHHHHHHHHHHH
Confidence 4444333210 00 01122335677776 5999998865 3444555443
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=2e-31 Score=250.68 Aligned_cols=271 Identities=16% Similarity=0.116 Sum_probs=199.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|||||||||||++|+++|+++||+|++++|...... ...++.+...++++++.+|+.|.+.+.+.+... ..+++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--~~~~~ 76 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADACSVQRAVIKA--QPQEV 76 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH--CCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccChHHhhhhhccc--ccccc
Confidence 68999999999999999999999999999999765421 122233333457999999999999999988873 57788
Q ss_pred EEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEcccccc--------------CCChhHHHHHHHHH
Q 043385 166 VSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAICVQ--------------KPLLEFQRAKLKFE 225 (405)
Q Consensus 166 v~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~~~~--------------~~~~~y~~sK~~~E 225 (405)
+|+++... ......++.|+.|+.+++++|++.+++ +|++.||..+| .|.+.|+.+|.++|
T Consensus 77 ~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E 156 (321)
T d1rpna_ 77 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGH 156 (321)
T ss_dssp EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred ccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHH
Confidence 88877543 234557889999999999999999865 78888887765 36688999999999
Q ss_pred HHHHHHhhhcCCceEEEEecCCcccCch----------HHHHHHHh-CCCeEEecCCeeeehhhcc-----------ccc
Q 043385 226 AEMMKVAEEDSGFTYSIVRPTAFFKSLG----------GQVELVKE-GKPYVMFGDGKLCAYCVLS-----------EDK 283 (405)
Q Consensus 226 ~~~~~~~~~~~gi~~~ilRp~~v~g~~~----------~~~~~~~~-g~~~~~~g~g~~~~~~~~~-----------~~~ 283 (405)
.++..++. ..+++++++||+.+|||.. .++..+.. +.+...+|+|.+.+++++. ...
T Consensus 157 ~~~~~~~~-~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~ 235 (321)
T d1rpna_ 157 WITVNYRE-SFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 235 (321)
T ss_dssp HHHHHHHH-HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHHh-hcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC
Confidence 99998876 5789999999999999852 12233333 4456678999887732221 223
Q ss_pred ccceEeccCCCCCCCHHHHHHHHHHHcCCCCC-eeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhccc
Q 043385 284 INQILPIGGPGKALTPLEQGEILFRLLGKEPK-FLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLIL 362 (405)
Q Consensus 284 ~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (405)
.++.||+++. +..++.++++.+.+..|.+.+ ...++... ...+. ...+..
T Consensus 236 ~~~~~ni~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~rp~~-------~~~~~~ 286 (321)
T d1rpna_ 236 KADDYVVATG-VTTTVRDMCQIAFEHVGLDYRDFLKIDPAF---------------------FRPAE-------VDVLLG 286 (321)
T ss_dssp SCCCEEECCS-CEEEHHHHHHHHHHTTTCCGGGTEEECGGG---------------------CCSSC-------CCBCCB
T ss_pred CcCCceeccc-ccceehhhhHHHHHHhCCCccceeecCCCC---------------------CCCCc-------cCCccC
Confidence 4678999986 899999999999999997643 22222210 00010 112335
Q ss_pred CccccccccccCCccchhhHHHHHHHHhhcc
Q 043385 363 DPETGEYSAEKTPSYGKDTLEEFFERVLREG 393 (405)
Q Consensus 363 d~~~~~~~lg~~P~~~~~~l~~~~~~~~~~~ 393 (405)
|.++++..|||+|.+ +++|.+++.++..
T Consensus 287 d~~k~~k~lG~~P~~---~l~e~i~~tv~~~ 314 (321)
T d1rpna_ 287 NPAKAQRVLGWKPRT---SLDELIRMMVEAD 314 (321)
T ss_dssp CTHHHHHHHCCCCCS---CHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCcCC---CHHHHHHHHHHHH
Confidence 788888999999954 5666666665543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-30 Score=247.24 Aligned_cols=287 Identities=15% Similarity=0.092 Sum_probs=196.9
Q ss_pred CeE-EEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCC-Cchh---HhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 86 INI-LVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGR-NDKE---ETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 86 ~~v-lVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~-~~~~---~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
||| ||||||||||++|+++|+++||+|++++|........ .... .......+++++.+|++|++.+.+++++ .
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~ 78 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE--V 78 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH--H
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhh--c
Confidence 467 9999999999999999999999999999976532110 0000 0111124789999999999999999987 3
Q ss_pred CccEEEEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCC---CEEEEEcccccc--------------CCChhHH
Q 043385 161 SIDVVVSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGA---SHFVLLSAICVQ--------------KPLLEFQ 218 (405)
Q Consensus 161 ~~d~Vv~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v---~~~V~~Ss~~~~--------------~~~~~y~ 218 (405)
++++|+|+++... ......+++|+.||.+++++|+++++ ++|||+||..+| .|.++|+
T Consensus 79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg 158 (347)
T d1t2aa_ 79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG 158 (347)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHH
T ss_pred ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHH
Confidence 6789999988653 23445679999999999999999875 489999999887 3557899
Q ss_pred HHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch-------H----HHHHHHhCCCeEEecCCeeeehhhcc-------
Q 043385 219 RAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG-------G----QVELVKEGKPYVMFGDGKLCAYCVLS------- 280 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~-------~----~~~~~~~g~~~~~~g~g~~~~~~~~~------- 280 (405)
.+|.++|+++..++. ..+++++++||+.+|||.. . ++.....+.+...+|+|.+.+++++.
T Consensus 159 ~sK~~aE~~~~~~~~-~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~ 237 (347)
T d1t2aa_ 159 AAKLYAYWIVVNFRE-AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM 237 (347)
T ss_dssp HHHHHHHHHHHHHHH-HHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHH
Confidence 999999999998776 5799999999999999841 1 22334456778889999887733221
Q ss_pred ----cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhh-
Q 043385 281 ----EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYA- 355 (405)
Q Consensus 281 ----~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 355 (405)
.....+.|+++.. ...++.+..+.+...+|+.......+...... ....... .......++.
T Consensus 238 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~~rp 304 (347)
T d1t2aa_ 238 WLMLQNDEPEDFVIATG-EVHSVREFVEKSFLHIGKTIVWEGKNENEVGR-----------CKETGKV-HVTVDLKYYRP 304 (347)
T ss_dssp HHHHHSSSCCCEEECCS-CCEEHHHHHHHHHHHTTCCEEEESCGGGCEEE-----------ETTTCCE-EEEECGGGSCS
T ss_pred HHHhhcCCCccceeccc-cccccchhhhhhhhhhcceeeecccchhhhhh-----------hhhcCCc-eeeecccCCCC
Confidence 1122456787764 78999999999999999865443332210000 0000000 0000000110
Q ss_pred -hhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 356 -AESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 356 -~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
....+..|.++++..|||+|.+ +++|.++++++
T Consensus 305 ~~~~~~~~d~skak~~Lgw~P~~---sl~e~i~~~I~ 338 (347)
T d1t2aa_ 305 TEVDFLQGDCTKAKQKLNWKPRV---AFDELVREMVH 338 (347)
T ss_dssp SCCCBCCBCCHHHHHHHCCCCCS---CHHHHHHHHHH
T ss_pred CCcCEeeECHHHHHHHHCCCcCC---CHHHHHHHHHH
Confidence 1122346889999999999954 55555555544
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=3.8e-30 Score=241.27 Aligned_cols=210 Identities=14% Similarity=0.192 Sum_probs=168.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+|||||||||||||++|+++|+++|+.|+++++..+ .|+.|.+.+.+.+++ ..+|.
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~----------------------~~~~~~~~~~~~~~~--~~~d~ 57 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDSRAVHDFFAS--ERIDQ 57 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCHHHHHHHHHH--HCCSE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh----------------------ccccCHHHHHHHHhh--cCCCE
Confidence 478999999999999999999999999887654321 589999999999887 46899
Q ss_pred EEEcccccCC------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-------------------CChhHHH
Q 043385 165 VVSCLASRSG------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-------------------PLLEFQR 219 (405)
Q Consensus 165 Vv~~a~~~~~------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-------------------~~~~y~~ 219 (405)
|+|+|+.... ...+.+++|+.||.+++++|++.+++||||+||.++|. +.++|+.
T Consensus 58 v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~ 137 (315)
T d1e6ua_ 58 VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAI 137 (315)
T ss_dssp EEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHH
T ss_pred EEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHH
Confidence 9999876532 34457789999999999999999999999999999872 1246999
Q ss_pred HHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH----------------HHHHHHhCCCeEEecCCeeeehhhcc---
Q 043385 220 AKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG----------------QVELVKEGKPYVMFGDGKLCAYCVLS--- 280 (405)
Q Consensus 220 sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~----------------~~~~~~~g~~~~~~g~g~~~~~~~~~--- 280 (405)
+|.++|++++.+.+ ..|++++++||++||||... .......+.++.+.|+|.+.+++++.
T Consensus 138 sK~~~E~~~~~~~~-~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~ 216 (315)
T d1e6ua_ 138 AKIAGIKLCESYNR-QYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDM 216 (315)
T ss_dssp HHHHHHHHHHHHHH-HHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehh
Confidence 99999999998876 56999999999999998431 12344557788889998887622221
Q ss_pred ------------------cccccceEeccCCCCCCCHHHHHHHHHHHcCCCCCeeecC
Q 043385 281 ------------------EDKINQILPIGGPGKALTPLEQGEILFRLLGKEPKFLKVP 320 (405)
Q Consensus 281 ------------------~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~~~~~~p 320 (405)
.......++++.. ...++.++++.+.+.+|.+..+...+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~i~~~~~~~~~i~~~~ 273 (315)
T d1e6ua_ 217 AAASIHVMELAHEVWLENTQPMLSHINVGTG-VDCTIRELAQTIAKVVGYKGRVVFDA 273 (315)
T ss_dssp HHHHHHHHHSCHHHHHHTSBTTBCCEEESCS-CCEEHHHHHHHHHHHHTCCSEEEEET
T ss_pred HHHHHHhhhhccccccccccccccccccCCC-cchHHHHHHHHHHHHhCCCcceEECC
Confidence 1223567888875 88999999999999999887665433
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.97 E-value=1e-29 Score=245.04 Aligned_cols=261 Identities=18% Similarity=0.178 Sum_probs=189.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHh-CCCeEEEEecCC---CCcCCCCchhH---hhh---------ccCCcEEEEcCCCCH
Q 043385 85 DINILVVGSTGYIGKFVVEELVS-RGFNVIAIAREK---SGIRGRNDKEE---TLN---------QLQGASVCFSDVTNL 148 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~l~r~~---~~~~~~~~~~~---~~~---------~~~~v~~~~~Dl~d~ 148 (405)
.|||||||||||||++|+++|++ .|++|+++++-. ........... .+. ....+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 57999999999999999999996 689999998521 11111111100 000 113688999999999
Q ss_pred HHHHHHHHhhCCCccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc------------
Q 043385 149 ESLEKSLENLGTSIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ------------ 211 (405)
Q Consensus 149 ~~l~~~~~~~~~~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~------------ 211 (405)
+.++++++.. .++|+|||+|+.... .....+++|+.++.++++++++.++++++++|+..+|
T Consensus 82 ~~l~~~~~~~-~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 160 (383)
T d1gy8a_ 82 DFLNGVFTRH-GPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (383)
T ss_dssp HHHHHHHHHS-CCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHhhhhhhcc-ceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccccccccc
Confidence 9999999863 347999999997542 3344788999999999999999999999999988765
Q ss_pred ---------CCChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH----------------HHH---------
Q 043385 212 ---------KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG----------------QVE--------- 257 (405)
Q Consensus 212 ---------~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~----------------~~~--------- 257 (405)
.|.+.|+.+|...|.++..+.. .+|++++++||+.+|||... ++.
T Consensus 161 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~-~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~ 239 (383)
T d1gy8a_ 161 EPIDINAKKSPESPYGESKLIAERMIRDCAE-AYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD 239 (383)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC
T ss_pred cccccccCCCCCCHHHhhHhHHHHHHHHHHH-HhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccc
Confidence 3567899999999999998876 57999999999999997432 111
Q ss_pred -------HHHhCCCeEEec------CCeeeehhhc---------------------ccccccceEeccCCCCCCCHHHHH
Q 043385 258 -------LVKEGKPYVMFG------DGKLCAYCVL---------------------SEDKINQILPIGGPGKALTPLEQG 303 (405)
Q Consensus 258 -------~~~~g~~~~~~g------~g~~~~~~~~---------------------~~~~~~~~y~i~~~g~~~t~~ela 303 (405)
....+.++.++| +|.+.+++++ .....+++|||++. +++++.|++
T Consensus 240 ~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~-~~~s~~el~ 318 (383)
T d1gy8a_ 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS-RGYSVREVI 318 (383)
T ss_dssp -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS-CCEEHHHHH
T ss_pred ccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCC-CceeHHHHH
Confidence 112344555554 4666552221 12334579999985 899999999
Q ss_pred HHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCccccccccccCCccch
Q 043385 304 EILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGK 379 (405)
Q Consensus 304 ~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~ 379 (405)
+.+.+.+|.+..+...+.. .+.. .....|.++++++|||+|.++.
T Consensus 319 ~~i~~~~~~~~~~~~~~~~------------------------~~d~-------~~~~~d~~k~~k~LGw~P~~~l 363 (383)
T d1gy8a_ 319 EVARKTTGHPIPVRECGRR------------------------EGDP-------AYLVAASDKAREVLGWKPKYDT 363 (383)
T ss_dssp HHHHHHHCCCCCEEEECCC------------------------TTCC-------SEECBCCHHHHHHTCCCCSCCS
T ss_pred HHHHHHhCCCCceEECCCC------------------------CCCc-------CEeeeCHHHHHHHHCCccCCCH
Confidence 9999999988777655422 0100 1223588899999999997654
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.96 E-value=3.1e-29 Score=236.72 Aligned_cols=266 Identities=15% Similarity=0.201 Sum_probs=197.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEEE
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVVV 166 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~Vv 166 (405)
||||||||||||++|+++|+++|++|+++++-..... ......+...++++++.+|++|.+.+.+++++. ++|+||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~--~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~--~~d~Vi 77 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGA--TDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY--MPDSCF 77 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTH--HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH--CCSEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccc--hhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc--CCceEE
Confidence 7999999999999999999999999999986432211 111223344568999999999999999999983 579999
Q ss_pred EcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc------------------------------
Q 043385 167 SCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ------------------------------ 211 (405)
Q Consensus 167 ~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~------------------------------ 211 (405)
|+|+.... ++...+++|+.||.|++++|.+.+++++|+.||..++
T Consensus 78 h~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T d1orra_ 78 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQ 157 (338)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSC
T ss_pred eecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCc
Confidence 99987642 3456789999999999999999998877777765432
Q ss_pred -CCChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCc----------hHHHHHHH-----hCCCeEEecCCeeee
Q 043385 212 -KPLLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSL----------GGQVELVK-----EGKPYVMFGDGKLCA 275 (405)
Q Consensus 212 -~~~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~----------~~~~~~~~-----~g~~~~~~g~g~~~~ 275 (405)
.|.+.|+.+|...|.+...... ..++...++|+..+|++. ..++..+. .+.++.++|+|.+.+
T Consensus 158 ~~~~~~y~~~k~~~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r 236 (338)
T d1orra_ 158 LDFHSPYGCSKGAADQYMLDYAR-IFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR 236 (338)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred cccccccccccchhhhhhhhhhh-ccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeE
Confidence 2457799999999998887765 578999999999888642 12333332 367888999998776
Q ss_pred hhh-------------c-ccccccceEeccC-CCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccc
Q 043385 276 YCV-------------L-SEDKINQILPIGG-PGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPS 340 (405)
Q Consensus 276 ~~~-------------~-~~~~~~~~y~i~~-~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 340 (405)
+++ . .....+++|++.+ .+..+++.|+++.+.+..|.+.++...+..
T Consensus 237 ~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~------------------ 298 (338)
T d1orra_ 237 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR------------------ 298 (338)
T ss_dssp ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC------------------
T ss_pred eeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCC------------------
Confidence 221 1 2335578999843 236789999999999999988887766532
Q ss_pred hhhhhhhhhhhhhhhhhhhcccCccccccccccCCccchhhHHHHHHHHhh
Q 043385 341 LEDAAEFGKIGRYYAAESMLILDPETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
.+. ...+..|.++++..|||+|. .++++.+++.++
T Consensus 299 ------~~~-------~~~~~~d~~k~~~~Lg~~p~---~sl~e~i~~ti~ 333 (338)
T d1orra_ 299 ------ESD-------QRVFVADIKKITNAIDWSPK---VSAKDGVQKMYD 333 (338)
T ss_dssp ------SSC-------CSEECBCCHHHHHHHCCCCC---SCHHHHHHHHHH
T ss_pred ------CCC-------cCeeeECHHHHHHHHCCCcC---CCHHHHHHHHHH
Confidence 000 01123588899999999994 455666665543
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=5.9e-29 Score=235.30 Aligned_cols=224 Identities=15% Similarity=0.092 Sum_probs=165.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC-----CCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG-----RNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-----~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+|+|||||||||||++|++.|+++||+|++++|....... ........ ....++++.+|+++.+.+.+.++.
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~~~~~-- 77 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDASSLRRWIDV-- 77 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHH--
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc-cccceEEEEccccCHHHHHHHHhh--
Confidence 3789999999999999999999999999999996542210 00000111 124688999999999999999887
Q ss_pred CCccEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcC-----CCEEEEEcccccc-------------CCChh
Q 043385 160 TSIDVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCG-----ASHFVLLSAICVQ-------------KPLLE 216 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~-----v~~~V~~Ss~~~~-------------~~~~~ 216 (405)
.++|+|||+|+.... .+...++.|+.++.++++++++.+ ..++++.||..++ .|.+.
T Consensus 78 ~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~ 157 (339)
T d1n7ha_ 78 IKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSP 157 (339)
T ss_dssp HCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSH
T ss_pred hccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcch
Confidence 368999999987542 445678899999999999987643 3478888887664 46788
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchH-------H---H-HHHHhCCCeEEecCCeeeehhhc------
Q 043385 217 FQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGG-------Q---V-ELVKEGKPYVMFGDGKLCAYCVL------ 279 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~-------~---~-~~~~~g~~~~~~g~g~~~~~~~~------ 279 (405)
|+.+|..+|.++..++. ..+++++++||+.+|||... + + .....+.+....|++.+.+++++
T Consensus 158 Y~~sK~~~E~~~~~~~~-~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~ 236 (339)
T d1n7ha_ 158 YAASKCAAHWYTVNYRE-AYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 236 (339)
T ss_dssp HHHHHHHHHHHHHHHHH-HHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH-HhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHH
Confidence 99999999999998876 57899999999999998421 1 1 22233455667788888773322
Q ss_pred ------ccccccceEeccCCCCCCCHHHHHHHHHHHcCCCC
Q 043385 280 ------SEDKINQILPIGGPGKALTPLEQGEILFRLLGKEP 314 (405)
Q Consensus 280 ------~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g~~~ 314 (405)
..+. ...+++... ...+..++++.+.+.+|...
T Consensus 237 ~~~~~~~~~~-~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~ 275 (339)
T d1n7ha_ 237 AMWLMLQQEK-PDDYVVATE-EGHTVEEFLDVSFGYLGLNW 275 (339)
T ss_dssp HHHHHHTSSS-CCEEEECCS-CEEEHHHHHHHHHHHTTCCG
T ss_pred HHHHHHhcCC-CCccccccc-cccccchhhhhhhhhhhccc
Confidence 2222 334555443 78999999999999998753
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.95 E-value=1.1e-28 Score=234.14 Aligned_cols=223 Identities=18% Similarity=0.193 Sum_probs=161.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..+++|||||||||||++|+++|+++|++|++++|+..+...................+.+|+.|.+.+.+++.+ +
T Consensus 9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~ 84 (342)
T d1y1pa1 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKG----A 84 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTT----C
T ss_pred CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhccc----c
Confidence 357899999999999999999999999999999998654321111101111112345577999999999999988 9
Q ss_pred cEEEEcccccCC--CCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccccc----------------------------
Q 043385 163 DVVVSCLASRSG--GVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAICVQ---------------------------- 211 (405)
Q Consensus 163 d~Vv~~a~~~~~--~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~~~---------------------------- 211 (405)
|+|+|+++.... .....++.|+.||.+++++|.+. ++++|||+||+.+.
T Consensus 85 ~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 164 (342)
T d1y1pa1 85 AGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL 164 (342)
T ss_dssp SEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred hhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccc
Confidence 999999997543 33446788999999999999886 69999999997542
Q ss_pred ------CCChhHHHHHHHHHHHHHHHhhh-cCCceEEEEecCCcccCc----------hHHHHHHHhCCCeEEe-cCCee
Q 043385 212 ------KPLLEFQRAKLKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL----------GGQVELVKEGKPYVMF-GDGKL 273 (405)
Q Consensus 212 ------~~~~~y~~sK~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~----------~~~~~~~~~g~~~~~~-g~g~~ 273 (405)
.|.++|+.+|..+|.++..+... ..+++++++||+.+|||. ..++..+..|...... +++..
T Consensus 165 ~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~ 244 (342)
T d1y1pa1 165 PESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQ 244 (342)
T ss_dssp CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSE
T ss_pred cccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccce
Confidence 12356999999999998887653 356889999999999973 1244555566544322 22221
Q ss_pred ee----h-------hhcccccccceEeccCCCCCCCHHHHHHHHHHHcC
Q 043385 274 CA----Y-------CVLSEDKINQILPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 274 ~~----~-------~~~~~~~~~~~y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
.+ | ++..+. .++.|+++++ +.+|+.|+++.+.+.+.
T Consensus 245 ~~v~v~Dva~~~i~~l~~~~-~~g~~~~~~~-~~~t~~eia~~i~k~~p 291 (342)
T d1y1pa1 245 YYVSAVDIGLLHLGCLVLPQ-IERRRVYGTA-GTFDWNTVLATFRKLYP 291 (342)
T ss_dssp EEEEHHHHHHHHHHHHHCTT-CCSCEEEECC-EEECHHHHHHHHHHHCT
T ss_pred eeeeHHHHHHHHHHhhcCcc-ccceEEEEcC-CceEHHHHHHHHHHHcC
Confidence 11 1 222333 3455667765 79999999999999874
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.95 E-value=2.8e-27 Score=225.23 Aligned_cols=274 Identities=13% Similarity=0.086 Sum_probs=191.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.++|||||||||||||++|++.|+++|++|++++|+..+.... .......++++++.+|++|++.+.++++.. .+
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~---~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~--~~ 80 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSL---FETARVADGMQSEIGDIRDQNKLLESIREF--QP 80 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCH---HHHTTTTTTSEEEECCTTCHHHHHHHHHHH--CC
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHH---HhhhhcccCCeEEEeeccChHhhhhhhhhc--hh
Confidence 3679999999999999999999999999999999987654321 122222357999999999999999999873 58
Q ss_pred cEEEEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCC-CEEEEEcccccc---------------CCChhHHHHH
Q 043385 163 DVVVSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGA-SHFVLLSAICVQ---------------KPLLEFQRAK 221 (405)
Q Consensus 163 d~Vv~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v-~~~V~~Ss~~~~---------------~~~~~y~~sK 221 (405)
|+|+|+|+.... .+...+++|+.|+.++++++++.+. ..+++.|+...+ .|.++|+.+|
T Consensus 81 ~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k 160 (356)
T d1rkxa_ 81 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSK 160 (356)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHH
T ss_pred hhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCcccccc
Confidence 999999986532 3456789999999999999998764 456666555443 3678899999
Q ss_pred HHHHHHHHHHhhh--------cCCceEEEEecCCcccCch--------HHHHHHHhCCCeEEecCCeeeehhh-------
Q 043385 222 LKFEAEMMKVAEE--------DSGFTYSIVRPTAFFKSLG--------GQVELVKEGKPYVMFGDGKLCAYCV------- 278 (405)
Q Consensus 222 ~~~E~~~~~~~~~--------~~gi~~~ilRp~~v~g~~~--------~~~~~~~~g~~~~~~g~g~~~~~~~------- 278 (405)
...|..+..++.+ ..++.++++||+.+|||.. .++..+. ++...+++.+.+.+..+
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~v~D~~~ 239 (356)
T d1rkxa_ 161 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFE-QSQPVIIRNPHAIRPWQHVLEPLS 239 (356)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHH-TTCCEECSCTTCEECCEETHHHHH
T ss_pred ccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHh-CCCceEEeeccccccccccccccc
Confidence 9999888876542 3578999999999999753 1234444 44444577777665211
Q ss_pred ------ccc----ccccceEeccC-CCCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhh
Q 043385 279 ------LSE----DKINQILPIGG-PGKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEF 347 (405)
Q Consensus 279 ------~~~----~~~~~~y~i~~-~g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (405)
... ...+...+... .+..+++.++++.+.+..|....+...... ..
T Consensus 240 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----------------------~~ 296 (356)
T d1rkxa_ 240 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNA-----------------------HP 296 (356)
T ss_dssp HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-----------------------------
T ss_pred hhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCC-----------------------CC
Confidence 111 11122333221 236789999999999999987665432210 00
Q ss_pred hhhhhhhhhhhhcccCccccccccccCCccch----hhHHHHHHHHhhc
Q 043385 348 GKIGRYYAAESMLILDPETGEYSAEKTPSYGK----DTLEEFFERVLRE 392 (405)
Q Consensus 348 ~~~~~~~~~~~~~~~d~~~~~~~lg~~P~~~~----~~l~~~~~~~~~~ 392 (405)
. ....+..|.++++..|||+|++.. +.+.+|+++..+.
T Consensus 297 ~-------~~~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~~~~~ 338 (356)
T d1rkxa_ 297 H-------EAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLSG 338 (356)
T ss_dssp --------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHTT
T ss_pred C-------CcCeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHHcC
Confidence 0 012234688899999999997743 3344566665553
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.94 E-value=2e-27 Score=221.38 Aligned_cols=225 Identities=20% Similarity=0.202 Sum_probs=170.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCc-hhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRND-KEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++||||||||||||++|+++|+++||+|++++|++........ ....+. ..+++++.+|+.|.+.+.+++++ +
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~-~~~v~~v~~d~~d~~~~~~~~~~----~ 76 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALKQ----V 76 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHTT----C
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc-cCCcEEEEeecccchhhhhhccC----c
Confidence 35789999999999999999999999999999998765421111 111122 25799999999999999999998 8
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------CCChhHHHHHHHHHHHHHHHhhh
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------KPLLEFQRAKLKFEAEMMKVAEE 234 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------~~~~~y~~sK~~~E~~~~~~~~~ 234 (405)
++++++++.... ..|..++.+++++|++.+..++|+.||.+++ .+...|...|..++++...
T Consensus 77 ~~~~~~~~~~~~------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 146 (312)
T d1qyda_ 77 DVVISALAGGVL------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEA---- 146 (312)
T ss_dssp SEEEECCCCSSS------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHH----
T ss_pred chhhhhhhhccc------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcc----
Confidence 999998875432 2567778899999999987788888988765 3456688888888887665
Q ss_pred cCCceEEEEecCCcccCchHH-----HHHHHhCCCeEEecCCeeee-------------hhhcccccccceE-eccCCCC
Q 043385 235 DSGFTYSIVRPTAFFKSLGGQ-----VELVKEGKPYVMFGDGKLCA-------------YCVLSEDKINQIL-PIGGPGK 295 (405)
Q Consensus 235 ~~gi~~~ilRp~~v~g~~~~~-----~~~~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~y-~i~~~g~ 295 (405)
.+++++++||+.+||+.... ......+..+.++++|++.+ .++..+...++.+ ++++ ++
T Consensus 147 -~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~-~~ 224 (312)
T d1qyda_ 147 -ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPP-MN 224 (312)
T ss_dssp -TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCG-GG
T ss_pred -cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCC-Cc
Confidence 79999999999999965332 11222345566678877665 2334455666654 5554 37
Q ss_pred CCCHHHHHHHHHHHcCCCCCeeecChHHHH
Q 043385 296 ALTPLEQGEILFRLLGKEPKFLKVPIGIMD 325 (405)
Q Consensus 296 ~~t~~ela~~l~~~~g~~~~~~~~p~~~~~ 325 (405)
.+|+.|+++.+.+++|++.++.++|.+.+.
T Consensus 225 ~~s~~e~~~~~~~~~g~~~~~~~i~~~~~~ 254 (312)
T d1qyda_ 225 ILSQKEVIQIWERLSEQNLDKIYISSQDFL 254 (312)
T ss_dssp EEEHHHHHHHHHHHHTCCCEECCBCSHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCeEEECCHHHHH
Confidence 899999999999999999999999987543
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.8e-26 Score=200.63 Aligned_cols=150 Identities=21% Similarity=0.292 Sum_probs=128.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
|.++||+||||||+||++++++|+++||+|++++|++++... . ...+++++.+|++|.+++.+++++ +
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-------~-~~~~~~~~~gD~~d~~~l~~al~~----~ 68 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------E-GPRPAHVVVGDVLQAADVDKTVAG----Q 68 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------S-SCCCSEEEESCTTSHHHHHHHHTT----C
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-------c-cccccccccccccchhhHHHHhcC----C
Confidence 356899999999999999999999999999999999876531 1 125799999999999999999998 9
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCC-------ChhHHHHHHHHHHHHHHHhhhc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKP-------LLEFQRAKLKFEAEMMKVAEED 235 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~-------~~~y~~sK~~~E~~~~~~~~~~ 235 (405)
|+|||++|.... ....+++..+++++++++++++++|||++||.+++.. ...|...|..+|+++++
T Consensus 69 d~vi~~~g~~~~--~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~----- 141 (205)
T d1hdoa_ 69 DAVIVLLGTRND--LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRE----- 141 (205)
T ss_dssp SEEEECCCCTTC--CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHH-----
T ss_pred CEEEEEeccCCc--hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHh-----
Confidence 999999986532 2334578899999999999999999999999887622 23688899999998876
Q ss_pred CCceEEEEecCCcccC
Q 043385 236 SGFTYSIVRPTAFFKS 251 (405)
Q Consensus 236 ~gi~~~ilRp~~v~g~ 251 (405)
.+++||+|||+.+++.
T Consensus 142 ~~~~~tiirp~~~~~~ 157 (205)
T d1hdoa_ 142 SGLKYVAVMPPHIGDQ 157 (205)
T ss_dssp TCSEEEEECCSEEECC
T ss_pred cCCceEEEecceecCC
Confidence 8999999999999864
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.94 E-value=3.2e-26 Score=210.39 Aligned_cols=244 Identities=19% Similarity=0.212 Sum_probs=182.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|||||||||||||++|+++|.++||+|++++|++ +|+.|.+.+.+++++. ++|+|
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~--~~d~v 56 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK--KPNVV 56 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH--CCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc--CCCEE
Confidence 7899999999999999999999999999998853 4899999999999873 58999
Q ss_pred EEcccccCC-----CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------------CCChhHHHHHHHHHH
Q 043385 166 VSCLASRSG-----GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------------KPLLEFQRAKLKFEA 226 (405)
Q Consensus 166 v~~a~~~~~-----~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------------~~~~~y~~sK~~~E~ 226 (405)
||+|+.... ........|+..+.++++.+...+. .++++||..++ .|...|+.+|...|.
T Consensus 57 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~ 135 (281)
T d1vl0a_ 57 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGEN 135 (281)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred Eeeccccccccccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhhhhhhhHHHH
Confidence 999886542 2344567888888888888887664 67778877665 345679999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcccCchHH----HHHHHhCCCeEEecCCeeee----hhhc-----ccccccceEeccCC
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFFKSLGGQ----VELVKEGKPYVMFGDGKLCA----YCVL-----SEDKINQILPIGGP 293 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~g~~~~~----~~~~~~g~~~~~~g~g~~~~----~~~~-----~~~~~~~~y~i~~~ 293 (405)
+++. .+.+++++||+++||+..++ +..+..+.+..+.++..... +++. .+....++||++++
T Consensus 136 ~~~~-----~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~~g~~~~~~~ 210 (281)
T d1vl0a_ 136 FVKA-----LNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTFHCTCK 210 (281)
T ss_dssp HHHH-----HCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTCCEEEECCCB
T ss_pred HHHH-----hCCCccccceeEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcccCceeEeCC
Confidence 8877 68899999999999997554 45666777777777643222 1111 12233569999986
Q ss_pred CCCCCHHHHHHHHHHHcCCCCCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccCcccccccccc
Q 043385 294 GKALTPLEQGEILFRLLGKEPKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILDPETGEYSAEK 373 (405)
Q Consensus 294 g~~~t~~ela~~l~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~ 373 (405)
+.+|+.|+++.+.+.+|.+.++.+++...+ ...+. + . ....+|.++++..+||
T Consensus 211 -~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~-----------------~~~a~--r-p------~~~~ld~~k~~~~~g~ 263 (281)
T d1vl0a_ 211 -GICSWYDFAVEIFRLTGIDVKVTPCTTEEF-----------------PRPAK--R-P------KYSVLRNYMLELTTGD 263 (281)
T ss_dssp -SCEEHHHHHHHHHHHHCCCCEEEEECSTTS-----------------CCSSC--C-C------SBCCBCCHHHHHTTCC
T ss_pred -CccchHHHHHHHHHHhCCCceEEeccHHHc-----------------CCcCC--C-c------cccccCHHHHHHHhCC
Confidence 899999999999999999988887764310 00000 0 0 1123588899999999
Q ss_pred CCccchhhHHHHHHHHhh
Q 043385 374 TPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 374 ~P~~~~~~l~~~~~~~~~ 391 (405)
+|+ +++|.++++++
T Consensus 264 ~~~----~~~~~l~~~l~ 277 (281)
T d1vl0a_ 264 ITR----EWKESLKEYID 277 (281)
T ss_dssp CCC----BHHHHHHHHHH
T ss_pred CCC----CHHHHHHHHHH
Confidence 984 45555555554
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.93 E-value=2.4e-26 Score=212.78 Aligned_cols=221 Identities=21% Similarity=0.259 Sum_probs=167.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCch--hHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDK--EETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~--~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++|||||||||||||++++++|+++|++|++++|++......... ...+. ..+++++.+|+.+...+.+.+++
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~---- 76 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVKN---- 76 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHHT----
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhhh----
Confidence 358999999999999999999999999999999987654321111 11112 25789999999999999999998
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-------CChhHHHHHHHHHHHHHHHhhh
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-------PLLEFQRAKLKFEAEMMKVAEE 234 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-------~~~~y~~sK~~~E~~~~~~~~~ 234 (405)
++.|+|+++.. +..++.++++++++++++++++.|+.+... +...+...+...+.++.+
T Consensus 77 ~~~vi~~~~~~----------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 142 (307)
T d1qyca_ 77 VDVVISTVGSL----------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEA---- 142 (307)
T ss_dssp CSEEEECCCGG----------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHH----
T ss_pred ceeeeeccccc----------ccchhhHHHHHHHHhccccceeeeccccccccccccccccccccccccccchhhc----
Confidence 99999988743 455677889999999999999999876642 223466667777776665
Q ss_pred cCCceEEEEecCCcccCchHH----HHHHHhCCCeEEecCCeeee-------------hhhcccccccce-EeccCCCCC
Q 043385 235 DSGFTYSIVRPTAFFKSLGGQ----VELVKEGKPYVMFGDGKLCA-------------YCVLSEDKINQI-LPIGGPGKA 296 (405)
Q Consensus 235 ~~gi~~~ilRp~~v~g~~~~~----~~~~~~g~~~~~~g~g~~~~-------------~~~~~~~~~~~~-y~i~~~g~~ 296 (405)
.+++++++||+.+||+.... ......+....+++++++.+ .++..+...++. |+++++ +.
T Consensus 143 -~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~-~~ 220 (307)
T d1qyca_ 143 -EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPA-NT 220 (307)
T ss_dssp -HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGG-GE
T ss_pred -cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCC-Cc
Confidence 78999999999999975432 23344556677788777766 222334455555 555554 89
Q ss_pred CCHHHHHHHHHHHcCCCCCeeecChHHHH
Q 043385 297 LTPLEQGEILFRLLGKEPKFLKVPIGIMD 325 (405)
Q Consensus 297 ~t~~ela~~l~~~~g~~~~~~~~p~~~~~ 325 (405)
+|+.|+++.+.+++|.+.++..+|.+.+.
T Consensus 221 ~s~~ei~~~~~~~~G~~~~~~~~~~~~~~ 249 (307)
T d1qyca_ 221 LSLNELVALWEKKIDKTLEKAYVPEEEVL 249 (307)
T ss_dssp EEHHHHHHHHHHHTTSCCEEEEECHHHHH
T ss_pred cCHHHHHHHHHHHHCCCCcEEECCHHHHH
Confidence 99999999999999999999999988654
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2.6e-25 Score=199.04 Aligned_cols=154 Identities=21% Similarity=0.379 Sum_probs=131.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+++++|||||||||||++|+++|+++|. +|++++|++.+.. ......++...+|+.+.+.+.+++++
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~--------~~~~~~i~~~~~D~~~~~~~~~~~~~--- 80 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD--------EEAYKNVNQEVVDFEKLDDYASAFQG--- 80 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC--------SGGGGGCEEEECCGGGGGGGGGGGSS---
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhc--------ccccceeeeeeecccccccccccccc---
Confidence 4568999999999999999999999994 8999999876542 11224688888999999999999988
Q ss_pred CccEEEEcccccC--CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC-CChhHHHHHHHHHHHHHHHhhhcCC
Q 043385 161 SIDVVVSCLASRS--GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK-PLLEFQRAKLKFEAEMMKVAEEDSG 237 (405)
Q Consensus 161 ~~d~Vv~~a~~~~--~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~-~~~~y~~sK~~~E~~~~~~~~~~~g 237 (405)
+|+|||++|... ....+++++|+.++.+++++|++.++++|||+|+.+++. +.+.|+.+|.++|+.+++ .+
T Consensus 81 -~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~~~Y~~~K~~~E~~l~~-----~~ 154 (232)
T d2bkaa1 81 -HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEE-----LK 154 (232)
T ss_dssp -CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHT-----TC
T ss_pred -cccccccccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCccchhHHHHHHhhhcccc-----cc
Confidence 999999998653 234457889999999999999999999999999999984 567899999999998876 45
Q ss_pred c-eEEEEecCCcccCch
Q 043385 238 F-TYSIVRPTAFFKSLG 253 (405)
Q Consensus 238 i-~~~ilRp~~v~g~~~ 253 (405)
+ +++|+|||.+||+..
T Consensus 155 ~~~~~IlRP~~i~G~~~ 171 (232)
T d2bkaa1 155 FDRYSVFRPGVLLCDRQ 171 (232)
T ss_dssp CSEEEEEECCEEECTTG
T ss_pred ccceEEecCceeecCCC
Confidence 5 599999999999864
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.91 E-value=3.3e-24 Score=203.55 Aligned_cols=217 Identities=16% Similarity=0.191 Sum_probs=161.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHH-HHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLE-SLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~-~l~~~~~~~~~~~ 162 (405)
++|+|+|||||||||++|+++|+++||+|++++|++.+.. ...+...++++++.+|+.|.. .++.++++ +
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~-----~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~----~ 72 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI-----AEELQAIPNVTLFQGPLLNNVPLMDTLFEG----A 72 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH-----HHHHHTSTTEEEEESCCTTCHHHHHHHHTT----C
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhh-----hhhhcccCCCEEEEeeCCCcHHHHHHHhcC----C
Confidence 4689999999999999999999999999999999877542 133444578999999999855 46777777 8
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-----CCChhHHHHHHHHHHHHHHHhhhcCC
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ-----KPLLEFQRAKLKFEAEMMKVAEEDSG 237 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~-----~~~~~y~~sK~~~E~~~~~~~~~~~g 237 (405)
|+++++..... ..|+..+++++++|+++|++++|+.||.... .+..+|..+|...|.++.+ .+
T Consensus 73 ~~~~~~~~~~~-------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~-----~~ 140 (350)
T d1xgka_ 73 HLAFINTTSQA-------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ-----LG 140 (350)
T ss_dssp SEEEECCCSTT-------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT-----SS
T ss_pred ceEEeeccccc-------chhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHHHh-----hc
Confidence 99988654322 2578889999999999999888888887654 2345788899999988776 78
Q ss_pred ceEEEEecCCcccCchHHH------HHHHhCCC-eEEecCCee--ee------------hhhcc--cccccceEeccCCC
Q 043385 238 FTYSIVRPTAFFKSLGGQV------ELVKEGKP-YVMFGDGKL--CA------------YCVLS--EDKINQILPIGGPG 294 (405)
Q Consensus 238 i~~~ilRp~~v~g~~~~~~------~~~~~g~~-~~~~g~g~~--~~------------~~~~~--~~~~~~~y~i~~~g 294 (405)
++++++||+.+++++.... .....+.. ...+.+++. .+ .++.. +...|++|++++
T Consensus 141 ~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-- 218 (350)
T d1xgka_ 141 LPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-- 218 (350)
T ss_dssp SCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS--
T ss_pred cCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC--
Confidence 9999999999988642210 11111211 122222222 11 12211 234688999997
Q ss_pred CCCCHHHHHHHHHHHcCCCCCeeecChHH
Q 043385 295 KALTPLEQGEILFRLLGKEPKFLKVPIGI 323 (405)
Q Consensus 295 ~~~t~~ela~~l~~~~g~~~~~~~~p~~~ 323 (405)
+.+|+.|+++.+.+++|++++++++|.+.
T Consensus 219 ~~~T~~eia~~l~~~~G~~v~~~~vp~~~ 247 (350)
T d1xgka_ 219 ETLSPVQVCAAFSRALNRRVTYVQVPKVE 247 (350)
T ss_dssp EEECHHHHHHHHHHHHTSCEEEEECSSCC
T ss_pred CcCCHHHHHHHHHHHHCCcceEEECCHHH
Confidence 47999999999999999999999998654
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.91 E-value=4.6e-24 Score=197.10 Aligned_cols=197 Identities=19% Similarity=0.214 Sum_probs=143.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|||||||||||||++|++.|.++|+ +++++++... +.+|++|.+.+.+++++. ++|+|
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~--~~D~V 58 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------------------FCGDFSNPKGVAETVRKL--RPDVI 58 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------------------SCCCTTCHHHHHHHHHHH--CCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------------------ccCcCCCHHHHHHHHHHc--CCCEE
Confidence 7899999999999999999999986 4455554321 237999999999999873 57999
Q ss_pred EEcccccC-----CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------------CCChhHHHHHHHHHH
Q 043385 166 VSCLASRS-----GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------------KPLLEFQRAKLKFEA 226 (405)
Q Consensus 166 v~~a~~~~-----~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------------~~~~~y~~sK~~~E~ 226 (405)
||+||... ..+...+++|+.++.++++++++.++ +++++||..+| .|.+.|+.+|..+|.
T Consensus 59 ih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~ 137 (298)
T d1n2sa_ 59 VNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEK 137 (298)
T ss_dssp EECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHH
T ss_pred EEecccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhhhhhhh
Confidence 99998653 23445778999999999999998886 68888888765 356789999999999
Q ss_pred HHHHHhhhcCCceEEEEecCCcc-cCch----HHHHHHHhCCCeEEecCCeeee----h-------hh---cccccccce
Q 043385 227 EMMKVAEEDSGFTYSIVRPTAFF-KSLG----GQVELVKEGKPYVMFGDGKLCA----Y-------CV---LSEDKINQI 287 (405)
Q Consensus 227 ~~~~~~~~~~gi~~~ilRp~~v~-g~~~----~~~~~~~~g~~~~~~g~g~~~~----~-------~~---~~~~~~~~~ 287 (405)
.++.. .....++|++.++ ++.. .+...+..+.++...++..... + ++ .......++
T Consensus 138 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~ 212 (298)
T d1n2sa_ 138 ALQDN-----CPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGL 212 (298)
T ss_dssp HHHHH-----CSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEE
T ss_pred hHHhh-----hcccccccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhcccccccc
Confidence 98873 2334555555554 4332 2335556666666555433221 1 11 123456789
Q ss_pred EeccCCCCCCCHHHHHHHHHHHcC
Q 043385 288 LPIGGPGKALTPLEQGEILFRLLG 311 (405)
Q Consensus 288 y~i~~~g~~~t~~ela~~l~~~~g 311 (405)
||++++ +.++..|+++.+.+..+
T Consensus 213 ~n~~~~-~~~~~~~~~~~i~~~~~ 235 (298)
T d1n2sa_ 213 YHLVAG-GTTTWHDYAALVFDEAR 235 (298)
T ss_dssp EECCCB-SCEEHHHHHHHHHHHHH
T ss_pred ccccCC-CceecHHHHHHHHhhhh
Confidence 999986 79999999999887654
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=2.2e-23 Score=193.25 Aligned_cols=259 Identities=17% Similarity=0.213 Sum_probs=155.7
Q ss_pred EEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHH-HHHhh-CCCccE
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEK-SLENL-GTSIDV 164 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~-~~~~~-~~~~d~ 164 (405)
|||||||||||++|+++|+++|+ +|+++++-..... ....... ...|..+.+.+.. .+... ...+++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLVDL-----NIADYMDKEDFLIQIMAGEEFGDVEA 71 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-----GHHHHTS-----CCSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-----hhccccc-----chhhhccchHHHHHHhhhhcccchhh
Confidence 89999999999999999999995 7999875433210 0111111 1123333333332 22211 135899
Q ss_pred EEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc--------------CCChhHHHHHHHHHHH
Q 043385 165 VVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ--------------KPLLEFQRAKLKFEAE 227 (405)
Q Consensus 165 Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~--------------~~~~~y~~sK~~~E~~ 227 (405)
|+|+|+.... ......+.|+.++.+++++++..+++ +|+.||..++ .|.+.|+.+|..+|.+
T Consensus 72 i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~ 150 (307)
T d1eq2a_ 72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEY 150 (307)
T ss_dssp EEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred hhhhccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccchhhhh
Confidence 9999875432 23346788899999999999999986 5555555543 3567899999999999
Q ss_pred HHHHhhhcCCceEEEEecCCcccCchH-----------HHHHHHhCCCeEE-ecCCeeeehhhc-----------ccccc
Q 043385 228 MMKVAEEDSGFTYSIVRPTAFFKSLGG-----------QVELVKEGKPYVM-FGDGKLCAYCVL-----------SEDKI 284 (405)
Q Consensus 228 ~~~~~~~~~gi~~~ilRp~~v~g~~~~-----------~~~~~~~g~~~~~-~g~g~~~~~~~~-----------~~~~~ 284 (405)
++.++. ..+++++++||+.+|||... +...+..++...+ .|++...+++++ .....
T Consensus 151 ~~~~~~-~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~ 229 (307)
T d1eq2a_ 151 VRQILP-EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV 229 (307)
T ss_dssp HHHHGG-GCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC
T ss_pred cccccc-ccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc
Confidence 999887 68999999999999998421 3455666655443 466665552211 12234
Q ss_pred cceEeccCCCCCCCHHHHHHHHHHHcCCC-CCeeecChHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhhhhhhhcccC
Q 043385 285 NQILPIGGPGKALTPLEQGEILFRLLGKE-PKFLKVPIGIMDFAIGVLDFLVKIFPSLEDAAEFGKIGRYYAAESMLILD 363 (405)
Q Consensus 285 ~~~y~i~~~g~~~t~~ela~~l~~~~g~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 363 (405)
.+.||+++. +..++.|+++.+.+..+.. +.+.+.|... . .. .......|
T Consensus 230 ~~~~~~~~~-~~~si~~i~~~i~~~~~~~~i~~~~~~~~~----------------------~-~~------~~~~~~~d 279 (307)
T d1eq2a_ 230 SGIFNLGTG-RAESFQAVADATLAYHKKGQIEYIPFPDKL----------------------K-GR------YQAFTQAD 279 (307)
T ss_dssp CEEEEESCS-CCBCHHHHHHHC--------------------------------------------------CCCSCCBC
T ss_pred ccccccccc-cchhHHHHHHHHHHhcCCCCeeEeeCCccC----------------------C-CC------CceeeecC
Confidence 679999985 8999999999998776532 2222222110 0 00 00111237
Q ss_pred ccccccccccCCccchhhHHHHHHHHhh
Q 043385 364 PETGEYSAEKTPSYGKDTLEEFFERVLR 391 (405)
Q Consensus 364 ~~~~~~~lg~~P~~~~~~l~~~~~~~~~ 391 (405)
.++++..++|+| ..+++|-+++.++
T Consensus 280 ~~k~~~~~~~~p---~~sl~egi~~~i~ 304 (307)
T d1eq2a_ 280 LTNLRAAGYDKP---FKTVAEGVTEYMA 304 (307)
T ss_dssp CHHHHHTTCCCC---CCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCC---CCCHHHHHHHHHH
Confidence 788899999999 4556666666554
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.90 E-value=1.1e-23 Score=188.32 Aligned_cols=209 Identities=21% Similarity=0.301 Sum_probs=149.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCe--EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFN--VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++|||||||||||+++++.|+++|++ |++++|++++. . ....+++++.+|+.|.+.+.+++++ +
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~-------~--~~~~~~~~~~~d~~~~~~~~~~~~~----~ 69 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-------E--KIGGEADVFIGDITDADSINPAFQG----I 69 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH-------H--HTTCCTTEEECCTTSHHHHHHHHTT----C
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH-------H--hccCCcEEEEeeecccccccccccc----c
Confidence 579999999999999999999999965 66777876532 1 1224789999999999999999998 9
Q ss_pred cEEEEcccccCC------------------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCC--------hh
Q 043385 163 DVVVSCLASRSG------------------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPL--------LE 216 (405)
Q Consensus 163 d~Vv~~a~~~~~------------------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~--------~~ 216 (405)
|+|||+++.... .......+|+.+++++++.+...+.+++.+.|+...+.+. ..
T Consensus 70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 149 (252)
T d2q46a1 70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGN 149 (252)
T ss_dssp SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCC
T ss_pred eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccc
Confidence 999999986421 2233567899999999999999999999999998877443 23
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCchHHHHHHHhCCCeEEecCCeeee---------hhhcccccccce
Q 043385 217 FQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLGGQVELVKEGKPYVMFGDGKLCA---------YCVLSEDKINQI 287 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~~~~~~~~~g~~~~~~g~g~~~~---------~~~~~~~~~~~~ 287 (405)
|...+...+.+... .+++++++||+++||+.......+.........+...... .++..+...+++
T Consensus 150 ~~~~~~~~~~~~~~-----~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~ 224 (252)
T d2q46a1 150 ILVWKRKAEQYLAD-----SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKA 224 (252)
T ss_dssp HHHHHHHHHHHHHH-----SSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGGGTTEE
T ss_pred hhhhhhhhhhhhhc-----ccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCccccCcE
Confidence 55566655555444 8999999999999998754322111111100011111111 334456677899
Q ss_pred EeccCC--CCCCCHHHHHHHHHHHcC
Q 043385 288 LPIGGP--GKALTPLEQGEILFRLLG 311 (405)
Q Consensus 288 y~i~~~--g~~~t~~ela~~l~~~~g 311 (405)
|||+++ +...++.|+.+++.++.+
T Consensus 225 ~~i~~~~~~~~~~~~~~~~lf~~i~~ 250 (252)
T d2q46a1 225 FDLGSKPEGTSTPTKDFKALFSQVTS 250 (252)
T ss_dssp EEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred EEEeeCCCCCChhHHHHHHHHHHHHh
Confidence 999874 234567788887776654
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.88 E-value=3.1e-22 Score=178.91 Aligned_cols=158 Identities=14% Similarity=0.175 Sum_probs=132.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|+||||||+++||++++++|+++|++|++++|+.+.. .++..+++|++|+++++++++.+.
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 70 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGVEVDVTDSDAVDRAFTAVEEH 70 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-------------cCceEEEEecCCHHHHHHHHHHHHHh
Confidence 47899999999999999999999999999999999987654 356789999999999988887663
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|++|||||.... +|++.+++|+.++.. +++.+++.+-++||++||..... ....|+.+|.
T Consensus 71 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 150 (237)
T d1uzma1 71 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA 150 (237)
T ss_dssp HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred cCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHH
Confidence 689999999997532 345578999998554 45556777778999999998863 4568999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.| .+|++++.|.||.+..+.
T Consensus 151 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~ 182 (237)
T d1uzma1 151 GVIGMARSIARELSKANVTANVVAPGYIDTDM 182 (237)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHhhhhcCCceeeeeeeCcCCChh
Confidence 999999998876 689999999999998764
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.88 E-value=2.9e-22 Score=181.56 Aligned_cols=170 Identities=14% Similarity=0.128 Sum_probs=135.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++|+++||||+++||+++++.|+++|++|++++|++++.......+.......++..+.+|++|+++++++++.+.
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 81 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 81 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999999887653222222222222367889999999999998887653
Q ss_pred CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|++|||||.... +|+..+++|+.++..+.++ +++.+-++||++||..... ....|+.+|.
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa 161 (258)
T d1iy8a_ 82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH 161 (258)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHH
Confidence 689999999996421 2445788999996666654 4555677999999998764 3478999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+++.+.+.++.| ..||+++.|.||.+..+.
T Consensus 162 al~~lt~~lA~el~~~gIrVN~i~PG~v~T~~ 193 (258)
T d1iy8a_ 162 GVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM 193 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred HHHHHHHHHHHHhCccCceEEEEeeCcccCHH
Confidence 999999998876 679999999999998764
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.87 E-value=4.2e-22 Score=179.71 Aligned_cols=170 Identities=15% Similarity=0.182 Sum_probs=134.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|++|||||+++||++++++|+++|++|++++|+.++.......+... ...++..+.+|++|+++++++++.+.
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK-YGVETMAFRCDVSNYEEVKKLLEAVKEK 80 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-HCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH-hCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999876653222211111 12467889999999999998887653
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEcccccc----CCChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQ----KPLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~----~~~~~y~~sK 221 (405)
+++|++|||||.... +|+..+++|+.++..+.+ .+++.+-+++|++||.... .....|+.+|
T Consensus 81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asK 160 (251)
T d1vl8a_ 81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK 160 (251)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHH
Confidence 689999999997532 344578899998665555 4556666799999987543 2246899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+++.+.+.++.| .+|++++.|.||++-.++
T Consensus 161 aal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~ 193 (251)
T d1vl8a_ 161 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 193 (251)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred HhHHHHHHHHHHHhcccCeEEEEEeeCcccCHH
Confidence 9999999998876 679999999999998765
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.87 E-value=8.5e-22 Score=176.71 Aligned_cols=164 Identities=17% Similarity=0.164 Sum_probs=132.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|++|||||+++||++++++|+++|++|++++|++++.. .....-+++.+.+|++|+++++++++.+.
T Consensus 2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~-------~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 74 (242)
T d1ulsa_ 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLR-------EAAEAVGAHPVVMDVADPASVERGFAEALAH 74 (242)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-------HHHHTTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-------HHHHHcCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999876542 22222368899999999999998887653
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEcccccc--CCChhHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQ--KPLLEFQRAKLK 223 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~--~~~~~y~~sK~~ 223 (405)
+++|++|||||.... +|+..+++|+.++..+.++ +++.+-.+++++||.+.. .....|+.+|.+
T Consensus 75 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~~~~Y~asKaa 154 (242)
T d1ulsa_ 75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAG 154 (242)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTTCHHHHHHHHH
T ss_pred cCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCCCcchHHHHHH
Confidence 689999999997542 3455788999996666554 445556678888876543 345789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.| .+|++++.|.||.+-.+.
T Consensus 155 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~ 185 (242)
T d1ulsa_ 155 VVGLTRTLALELGRWGIRVNTLAPGFIETRM 185 (242)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHhhhCcEEEEEeeCcccChh
Confidence 99999998876 679999999999997654
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.87 E-value=7.9e-22 Score=177.50 Aligned_cols=162 Identities=15% Similarity=0.144 Sum_probs=132.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++|++|||||+++||+++++.|+++|++|++++|+++.. +..+.. +..++++|++|+++++++++.+.
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-------~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 74 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-------EVAEAI-GGAFFQVDLEDERERVRFVEEAAYAL 74 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-------HHHHHH-TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-------HHHHHc-CCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999987542 222222 56789999999999988887653
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|++|||||.... +|+..+++|+.++.++.++ +++.+-++||++||..... ....|+.+|.+
T Consensus 75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 154 (248)
T d2d1ya1 75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG 154 (248)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence 689999999997532 3445788999996665554 5566667999999998874 34789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.| .+|++++.|.||.+-.+.
T Consensus 155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~ 185 (248)
T d2d1ya1 155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEA 185 (248)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeCCCCCch
Confidence 99999998876 679999999999997654
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.87 E-value=6.9e-22 Score=177.28 Aligned_cols=164 Identities=20% Similarity=0.243 Sum_probs=135.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
++++|++|||||+++||++++++|+++|++|++++|++++.. +.....+++..+.+|++|+++++++++.+ ++
T Consensus 2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~------~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-g~ 74 (242)
T d1cyda_ 2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV------SLAKECPGIEPVCVDLGDWDATEKALGGI-GP 74 (242)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHHHSTTCEEEECCTTCHHHHHHHHTTC-CC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH------HHHHhcCCCeEEEEeCCCHHHHHHHHHHc-CC
Confidence 578999999999999999999999999999999999876542 23334568899999999999999999875 78
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHH----hc-CCCEEEEEccccccCC---ChhHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGR----NC-GASHFVLLSAICVQKP---LLEFQRAKLKF 224 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~----~~-~v~~~V~~Ss~~~~~~---~~~y~~sK~~~ 224 (405)
+|++|||||.... +++..+++|+.++..+.+++. +. +-+++|++||.....+ ...|+.+|.++
T Consensus 75 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal 154 (242)
T d1cyda_ 75 VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAM 154 (242)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHH
Confidence 9999999997542 344578899999777666432 22 3469999999987643 46899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.++.| ..|+++++|.||++..++
T Consensus 155 ~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~ 184 (242)
T d1cyda_ 155 TMLTKAMAMELGPHKIRVNSVNPTVVLTDM 184 (242)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred HHHHHHHHHHhCccCeecccCCCCCccCHH
Confidence 9999998876 679999999999998764
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.87 E-value=6.4e-22 Score=178.58 Aligned_cols=166 Identities=14% Similarity=0.134 Sum_probs=134.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|++|||||+++||++++++|+++|++|++++|++++.... .+.+ ..++.++++|++|+++++++++.+.
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 76 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT---AREL--GDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHTT--GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHh--CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999987654211 1111 1367899999999999998887653
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccCC---ChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQKP---LLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~ 222 (405)
+++|++|||||.... +|...+++|+.++..+.++ +++.+-++||++||.....+ ...|+.+|.
T Consensus 77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa 156 (254)
T d1hdca_ 77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKW 156 (254)
T ss_dssp HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHH
Confidence 689999999997542 3445788999986665554 45666789999999988643 478999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+++.+.+.++.| ..|+++++|.||.+..++
T Consensus 157 al~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~ 188 (254)
T d1hdca_ 157 GVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM 188 (254)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHhCCCceEEEEeeeCcccCcc
Confidence 999999998876 679999999999997654
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=9.3e-22 Score=176.73 Aligned_cols=165 Identities=19% Similarity=0.229 Sum_probs=134.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
..+++|+||||||+++||++++++|+++|++|++++|+++++. +.....+++..+.+|++|+++++++++.+ +
T Consensus 3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-g 75 (244)
T d1pr9a_ 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD------SLVRECPGIEPVCVDLGDWEATERALGSV-G 75 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHHHSTTCEEEECCTTCHHHHHHHHTTC-C
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHH------HHHHhcCCCeEEEEeCCCHHHHHHHHHHh-C
Confidence 3578999999999999999999999999999999999876542 23334467899999999999999999875 7
Q ss_pred CccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH-----HhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 161 SIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG-----RNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa-----~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
++|++|||||.... +|+..+++|+.++..+.+++ ++.+-+++|++||..... ....|+.+|.+
T Consensus 76 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaa 155 (244)
T d1pr9a_ 76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGA 155 (244)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHH
Confidence 89999999997542 34457889999866655543 233457999999998864 34679999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.| ..|++++.|.||.+..+.
T Consensus 156 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~ 186 (244)
T d1pr9a_ 156 LDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186 (244)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred HHHHHHHHHHHhCCCcEEEEEEeeCcCcChH
Confidence 99999998876 579999999999998764
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=5.9e-22 Score=178.45 Aligned_cols=164 Identities=18% Similarity=0.229 Sum_probs=133.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|++|||||+++||+++++.|+++|++|++++|+++... +.....+++..+.+|++|+++++++++.+.
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~------~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 76 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGR------ALEQELPGAVFILCDVTQEDDVKTLVSETIRR 76 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH------HHHHhcCCCeEEEccCCCHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999999876542 223334678999999999999998887653
Q ss_pred -CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|++|||||.... +|++.+++|+.++.++.++ +++.+ +++|++||.... .....|+.+|
T Consensus 77 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asK 155 (250)
T d1ydea1 77 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATK 155 (250)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred cCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHH
Confidence 689999999995421 2345778999996665554 44444 699999999875 3456899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+++.+.+.++.| ..|++++.|.||+|-.+.
T Consensus 156 aal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~ 188 (250)
T d1ydea1 156 GAVTAMTKALALDESPYGVRVNCISPGNIWTPL 188 (250)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred hhHHHHHHHHHHHhcccCeEEEEEeeCCCCChh
Confidence 9999999998886 679999999999997653
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.87 E-value=8.3e-22 Score=176.75 Aligned_cols=167 Identities=14% Similarity=0.108 Sum_probs=135.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|+++||||+++||+++++.|+++|++|++++|++++.... .+.+. .++.++++|++|+++++++++.+.
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM---AAELA--DAARYVHLDVTQPAQWKAAVDTAVTA 77 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHTG--GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHhh--CcceEEEeecCCHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999987654211 11121 367889999999999988887653
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccCC---ChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQKP---LLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~ 222 (405)
+++|++|||||.... +|.+.+++|+.++..+.+ .+++.+-++||++||.....+ ...|+.+|+
T Consensus 78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa 157 (244)
T d1nffa_ 78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF 157 (244)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHH
Confidence 689999999997542 345578999999666555 445556679999999988743 468999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
..+.+.+.++.| .+|++++.|.||.+..+..
T Consensus 158 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~ 190 (244)
T d1nffa_ 158 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT 190 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGG
T ss_pred HHHHHHHHHHHHhcccCEEEEEEeeCCccChhH
Confidence 999999998876 6899999999999987653
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.87 E-value=3.3e-22 Score=180.50 Aligned_cols=168 Identities=15% Similarity=0.139 Sum_probs=134.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++|++|||||+++||++++++|+++|++|++++|+++++..... .+.. ..++..+.+|++|+++++++++.+.
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~---~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 83 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVD---EIKSFGYESSGYAGDVSKKEEISEVINKILT 83 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHH---HHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH---HHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999998765532222 2222 2368899999999999998887653
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEcccccc---CCChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQ---KPLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK 221 (405)
+++|++|||||.... +|...+++|+.++..+.+ .+++.+-++||++||.... .....|+.+|
T Consensus 84 ~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asK 163 (251)
T d2c07a1 84 EHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSK 163 (251)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred hcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHH
Confidence 789999999997532 344577899988655554 4566677899999998876 3457899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
++++.+.+.++.| ..|++++.|.||++..+.
T Consensus 164 aal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~ 196 (251)
T d2c07a1 164 AGVIGFTKSLAKELASRNITVNAIAPGFISSDM 196 (251)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEccCCEeccc
Confidence 9999999998876 679999999999998764
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=6.5e-22 Score=177.44 Aligned_cols=169 Identities=14% Similarity=0.162 Sum_probs=135.1
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+.+||+|+||||+++||++++++|+++|++|++++|+++++......+.. ...++..+.+|++|+++++++++.+.
T Consensus 3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~ 80 (244)
T d1yb1a_ 3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG--LGAKVHTFVVDCSNREDIYSSAKKVKA 80 (244)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999998765433322222 22478899999999999998887652
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHH----HHHHHhcCCCEEEEEccccccCCC---hhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNS----LVAGRNCGASHFVLLSAICVQKPL---LEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~l----l~aa~~~~v~~~V~~Ss~~~~~~~---~~y~~sK 221 (405)
+++|++|||||.... .+++.+++|+.|..++ ++.+++.+-++||++||..+..+. ..|+.+|
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK 160 (244)
T d1yb1a_ 81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK 160 (244)
T ss_dssp HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHH
Confidence 789999999997642 2345788999985554 445667777899999999988653 5699999
Q ss_pred HHHHHHHHHHhhh-----cCCceEEEEecCCcccC
Q 043385 222 LKFEAEMMKVAEE-----DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 222 ~~~E~~~~~~~~~-----~~gi~~~ilRp~~v~g~ 251 (405)
++.+.+.+.++.| ..|+++++|.||+|-.+
T Consensus 161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~ 195 (244)
T d1yb1a_ 161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 195 (244)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence 9999999988865 25899999999988554
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=3.2e-22 Score=179.64 Aligned_cols=166 Identities=20% Similarity=0.229 Sum_probs=133.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|+++||||+++||+++++.|+++|++|++++|+++++... .+.+. .+...+.+|++|+++++++++.+.
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~---~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAI---SDYLG--ANGKGLMLNVTDPASIESVLEKIRAE 75 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH---HHHHG--GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH---HHHhC--CCCcEEEEEecCHHHhhhhhhhhhcc
Confidence 36789999999999999999999999999999999987654211 11121 357889999999999988887653
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|++|||||.... +|...+++|+.++..+.+ .+++.+-++||++||..... ....|+.+|.
T Consensus 76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa 155 (243)
T d1q7ba_ 76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKA 155 (243)
T ss_dssp TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred cCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHH
Confidence 689999999997542 344578899998665555 45666667999999988763 3578999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+++.+.+.++.| .+|++++.|.||.+-.+.
T Consensus 156 al~~lt~~lA~ela~~gIrVN~I~PG~i~T~~ 187 (243)
T d1q7ba_ 156 GLIGFSKSLAREVASRGITVNVVAPGFIETDM 187 (243)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecceEechh
Confidence 999999998876 689999999999997653
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.87 E-value=3.2e-22 Score=176.08 Aligned_cols=146 Identities=25% Similarity=0.389 Sum_probs=115.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+|+|||||||||||++|+++|+++|+ +|++++|++... .+.+ ..+..|..++...+. ..+
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------------~~~~---~~~~~d~~~~~~~~~---~~~ 63 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPRL---DNPVGPLAELLPQLD---GSI 63 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTTE---ECCBSCHHHHGGGCC---SCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------------cccc---cccccchhhhhhccc---cch
Confidence 48999999999999999999999997 677777765321 1222 344455444433333 358
Q ss_pred cEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc-CCChhHHHHHHHHHHHHHHHhhhcCCc
Q 043385 163 DVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ-KPLLEFQRAKLKFEAEMMKVAEEDSGF 238 (405)
Q Consensus 163 d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~-~~~~~y~~sK~~~E~~~~~~~~~~~gi 238 (405)
|+||||+|... .....+.+.|+.++.+++++|++.++++||++||.+++ .+.+.|..+|..+|+.+++ .+.
T Consensus 64 d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~~~y~~~K~~~E~~l~~-----~~~ 138 (212)
T d2a35a1 64 DTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSSIFYNRVKGELEQALQE-----QGW 138 (212)
T ss_dssp SEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTT-----SCC
T ss_pred heeeeeeeeeccccccccccccchhhhhhhcccccccccccccccccccccccccccchhHHHHHHhhhccc-----ccc
Confidence 99999998652 23345788999999999999999999999999999998 4668899999999998875 454
Q ss_pred -eEEEEecCCcccCch
Q 043385 239 -TYSIVRPTAFFKSLG 253 (405)
Q Consensus 239 -~~~ilRp~~v~g~~~ 253 (405)
+++|+||+.|||+..
T Consensus 139 ~~~~I~Rp~~v~G~~~ 154 (212)
T d2a35a1 139 PQLTIARPSLLFGPRE 154 (212)
T ss_dssp SEEEEEECCSEESTTS
T ss_pred ccceeeCCcceeCCcc
Confidence 699999999999864
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=6.3e-22 Score=178.95 Aligned_cols=168 Identities=11% Similarity=0.148 Sum_probs=134.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|++|||||+++||++++++|+++|++|++++|++++.....+.+.. ...++..+++|++|+++++++++.+.
T Consensus 8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~--~g~~~~~~~~Dvs~~~~~~~~~~~~~~~ 85 (255)
T d1fmca_ 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ--LGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH--cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999987665322222221 12468899999999999988887653
Q ss_pred -CCccEEEEcccccCC--------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+++|++|||||.... +|+..+++|+.++..+.+ .+++.+-+++|++||..... ....|+.+|.+
T Consensus 86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaa 165 (255)
T d1fmca_ 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAA 165 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHH
Confidence 689999999997542 244578899998665555 44556667899999988764 44789999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
.+.+.+.++.| .+|+++++|.||.+..+
T Consensus 166 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 195 (255)
T d1fmca_ 166 ASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195 (255)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred HHHHHHHHHHHhCccCeEEEEeeeCcCcCh
Confidence 99999998876 68999999999999765
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.87 E-value=6.3e-22 Score=179.72 Aligned_cols=169 Identities=16% Similarity=0.089 Sum_probs=131.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC-cCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG-IRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++|++|||||+++||++++++|+++|++|++.+|+... .+.....+.. ....++.++.+|++|+++++++++.+.
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~-~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAA-QHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHH-HHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999997532 2111111111 112468889999999999999887653
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|++|||||.... +|...+++|+.++.. +++.+++.+-++||++||..... ....|+.+|.
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 160 (260)
T d1x1ta1 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence 689999999997542 344578899988655 45555666778999999998874 3467999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+++.+.+.++.| ..|++++.|.||++-.++
T Consensus 161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~ 192 (260)
T d1x1ta1 161 GVVGFTKVTALETAGQGITANAICPGWVRTPL 192 (260)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred hHHHhHHHHHHHhchhCcEEEEEecCCCCChh
Confidence 999999998876 689999999999997764
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.86 E-value=3e-21 Score=173.68 Aligned_cols=165 Identities=13% Similarity=0.105 Sum_probs=130.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++|+++||||+++||+++++.|+++|++|++.+|++.+.. . .... ...++..+.+|++|+++++++++.+.
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~--~---~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~ 77 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEA--E---AAIRNLGRRVLTVKCDVSQPGDVEAFGKQVIST 77 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH--H---HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHH--H---HHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999865321 1 1111 12468899999999999998887653
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccCC---ChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQKP---LLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~ 222 (405)
+++|++|||||.... +|+..+++|+.+...+.+ .+++.+-++||++||.....+ ...|+.+|.
T Consensus 78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 157 (247)
T d2ew8a1 78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA 157 (247)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhc
Confidence 689999999997542 345578899998655554 556667789999999988643 468999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.| ..|++++.|.||.+..+.
T Consensus 158 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~ 189 (247)
T d2ew8a1 158 ANIGFTRALASDLGKDGITVNAIAPSLVRTAT 189 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred cHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence 999999998876 679999999999997764
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.86 E-value=2.1e-21 Score=175.17 Aligned_cols=168 Identities=13% Similarity=0.096 Sum_probs=134.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|++|||||+++||+++++.|+++|++|++++|+++..... .+.+....++.++.+|++|+++++++++.+.
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKA---AKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKA 79 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999987654211 1223333578999999999999988887653
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCC-EEEEEccccccCC---ChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGAS-HFVLLSAICVQKP---LLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~-~~V~~Ss~~~~~~---~~~y~~sK 221 (405)
+++|++|||||.... +|...+++|+.++..+.++ +++.+.+ +||++||.....+ ...|+.+|
T Consensus 80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asK 159 (251)
T d1zk4a1 80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK 159 (251)
T ss_dssp HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHH
Confidence 689999999997542 2445788999996666655 4555554 8999999987643 46899999
Q ss_pred HHHHHHHHHHhhh----cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE----DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~ 252 (405)
.+++.+.+.++.| .+|++++.|.||.+..++
T Consensus 160 aal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~ 194 (251)
T d1zk4a1 160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL 194 (251)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred HHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChh
Confidence 9999998887754 579999999999997654
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.86 E-value=1.3e-21 Score=177.37 Aligned_cols=169 Identities=17% Similarity=0.143 Sum_probs=134.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|++|||||+++||+++++.|+++|++|++.+|++++.......+. ....++..+.+|++|+++++++++.+.
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~--~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR--SKGFKVEASVCDLSSRSERQELMNTVANH 82 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--hcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999998776532222111 112467889999999999988876542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|++|||||.... +|+..+++|+.++..+.++ +++.+-++||++||..... ....|+.+|
T Consensus 83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 162 (259)
T d2ae2a_ 83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK 162 (259)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHH
Confidence 379999999997542 3445789999986655554 5566667999999988763 346799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
..++.+.+.++.| ..|++++.|.||.|-.++
T Consensus 163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~ 195 (259)
T d2ae2a_ 163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL 195 (259)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHH
T ss_pred HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHH
Confidence 9999999998876 679999999999997654
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.86 E-value=1.3e-21 Score=177.33 Aligned_cols=169 Identities=18% Similarity=0.180 Sum_probs=127.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|++|||||+++||++++++|+++|++|++++|+++++......+. ....++..+.+|++|+++++++++.+.
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQ--KKGFQVTGSVCDASLRPEREKLMQTVSSM 82 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--hcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999998766532222111 122468899999999999888776542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+++|++|||||.... +++..+++|+.++..+.+ .+++.+-++||++||..... ....|+.+|
T Consensus 83 ~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK 162 (259)
T d1xq1a_ 83 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATK 162 (259)
T ss_dssp HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHH
T ss_pred hCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccc
Confidence 579999999997532 345578999999665555 45666778999999988763 346799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+++.+.+.++.| ..|+++++|.||.+-.+.
T Consensus 163 aal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~ 195 (259)
T d1xq1a_ 163 GALNQLARNLACEWASDGIRANAVAPAVIATPL 195 (259)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred cchhhhhHHHHHHhcccCeEEEEeccCcccCHH
Confidence 9999999998876 679999999999997764
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.86 E-value=1.1e-21 Score=177.93 Aligned_cols=168 Identities=14% Similarity=0.113 Sum_probs=134.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+++|++|||||+++||+++++.|+++|++|++++|+++++......+.. ...++..+.+|++|+++++++++.+.
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE--KGVEARSYVCDVTSEEAVIGTVDSVVRDF 80 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT--TTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 6789999999999999999999999999999999987665322221111 12368889999999999988887653
Q ss_pred CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccCC---ChhHHHHHH
Q 043385 160 TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQKP---LLEFQRAKL 222 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~ 222 (405)
+++|++|||||.... +|...+++|+.++..+.++ +++.+-++||++||.....+ ...|+.+|.
T Consensus 81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa 160 (260)
T d1zema1 81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG 160 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHH
Confidence 689999999996431 2345778999986665554 45556679999999887643 468999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+++.+.+.++.| .+|++++.|.||.|-.++
T Consensus 161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~ 192 (260)
T d1zema1 161 AIIALTETAALDLAPYNIRVNAISPGYMGPGF 192 (260)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred HHHHHHHHHHHHhhhhCCEEEEeccCcccCcc
Confidence 999999998876 679999999999998875
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.86 E-value=2.1e-21 Score=176.02 Aligned_cols=170 Identities=14% Similarity=0.114 Sum_probs=133.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++|+++||||+++||++++++|+++|++|++++|+.+... ....+.+.. ..++..+++|++|+++++++++.+.
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~--~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEA--NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK 81 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH--HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHH--HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999864321 001112222 2367889999999999988887653
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHH----HHHHhcCCC-EEEEEccccccCC---ChhHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSL----VAGRNCGAS-HFVLLSAICVQKP---LLEFQRA 220 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll----~aa~~~~v~-~~V~~Ss~~~~~~---~~~y~~s 220 (405)
+++|++|||||.... +|.+.+++|+.++..+. +.+++.+.+ +||++||.....+ ...|+.+
T Consensus 82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~as 161 (261)
T d1geea_ 82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAAS 161 (261)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccC
Confidence 689999999997542 34557889999865554 445566544 5899999887643 4689999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
|.+++.+.+.++.| ..|+++++|.||.+..+..
T Consensus 162 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~ 196 (261)
T d1geea_ 162 KGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN 196 (261)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG
T ss_pred CccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhH
Confidence 99999999998876 6799999999999987753
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.85 E-value=3.4e-21 Score=174.35 Aligned_cols=167 Identities=16% Similarity=0.120 Sum_probs=134.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|+++||||+++||+++++.|+++|++|++++|+.++.... .+++ ..++..+.+|++|+++++++++.+.
T Consensus 2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~---~~~~--~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 76 (256)
T d1k2wa_ 2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARAT---AAEI--GPAACAIALDVTDQASIDRCVAELLDR 76 (256)
T ss_dssp TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHH---HHHH--CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHh--CCceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999987654311 1112 2478889999999999998887653
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----Hhc-CCCEEEEEccccccCC---ChhHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNC-GASHFVLLSAICVQKP---LLEFQRAK 221 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~-~v~~~V~~Ss~~~~~~---~~~y~~sK 221 (405)
+++|++|||||.... +|+..+++|+.++..+.+++ .+. .-++||++||.....+ ...|+.+|
T Consensus 77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 156 (256)
T d1k2wa_ 77 WGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK 156 (256)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence 689999999997542 34457899999977666643 222 3569999999988743 46899999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCch
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~~ 253 (405)
.+++.+.+.++.| ..||+++.|.||.+-.+..
T Consensus 157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~ 190 (256)
T d1k2wa_ 157 AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHW 190 (256)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTH
T ss_pred hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhh
Confidence 9999999988876 6799999999999988753
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.85 E-value=6.1e-21 Score=173.93 Aligned_cols=168 Identities=15% Similarity=0.117 Sum_probs=133.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|++|||||+++||++++++|+++|++|++++|++++... ..+.+.....+.++.+|++|+++++++++.+.
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~---~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQK---VCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAK 79 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---HHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---HHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999998765431 12233333467889999999999998887653
Q ss_pred -CCccEEEEcccccCC-----------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC---C-ChhHHH
Q 043385 160 -TSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK---P-LLEFQR 219 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~---~-~~~y~~ 219 (405)
+++|++|||||.... +++..+++|+.++..+.+ .+++.+-+++|++||..... + ...|+.
T Consensus 80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~a 159 (268)
T d2bgka1 80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTA 159 (268)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHH
T ss_pred cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccch
Confidence 689999999996431 233467899998655554 45566677999999987763 2 247999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|.+++.+.+.++.| ..|++++.|.||.+-.+.
T Consensus 160 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~ 194 (268)
T d2bgka1 160 TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL 194 (268)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCC
T ss_pred hHHHHHhCHHHHHHHhChhCeEEEecCCCCccChH
Confidence 999999999998876 679999999999997764
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.85 E-value=2.4e-21 Score=175.59 Aligned_cols=166 Identities=18% Similarity=0.150 Sum_probs=134.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
+|.+|||||+++||++++++|+++|++|++.+|+++++....+.+.. ...++..+++|++|+++++++++.+. ++
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~--~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~ 79 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE--AGVEADGRTCDVRSVPEIEALVAAVVERYGP 79 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 57889999999999999999999999999999987665432222211 12468889999999999998887653 78
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHh------cCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRN------CGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~------~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+|++|||||.... +|++.+++|+.++..+.+++.. .+.+++|++||..... ....|+.+|.+
T Consensus 80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaa 159 (257)
T d2rhca1 80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG 159 (257)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHH
Confidence 9999999997532 3455789999998888887643 3556899999988764 34679999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
++.+.+.++.| ..|++++.|.||++-.++
T Consensus 160 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~ 190 (257)
T d2rhca1 160 VVGFTKALGLELARTGITVNAVCPGFVETPM 190 (257)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEEEECSBCSHH
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeCCCCCHH
Confidence 99999999887 678999999999997654
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=3.8e-21 Score=173.81 Aligned_cols=168 Identities=14% Similarity=0.123 Sum_probs=129.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---C
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---T 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~ 160 (405)
.+|++|||||+++||+++++.|+++|++|++++|+.++.......+.......++..+.+|++|+++++++++.+. +
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999999999999999876543221111111112367889999999999998887653 6
Q ss_pred CccEEEEcccccC-CCCcchhHhHHHHHHHHHH----HHHhcC---CCEEEEEccccccCC---ChhHHHHHHHHHHHHH
Q 043385 161 SIDVVVSCLASRS-GGVKDSWKIDYEANRNSLV----AGRNCG---ASHFVLLSAICVQKP---LLEFQRAKLKFEAEMM 229 (405)
Q Consensus 161 ~~d~Vv~~a~~~~-~~~~~~~~~n~~g~~~ll~----aa~~~~---v~~~V~~Ss~~~~~~---~~~y~~sK~~~E~~~~ 229 (405)
++|++|||||... .++++.+++|+.++.++.. .+++.+ -++||++||.....| ...|+.+|.+++.+.+
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr 161 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR 161 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHH
Confidence 8999999999764 4667789999988655444 444432 257999999988643 4679999999999887
Q ss_pred H--Hhhh--cCCceEEEEecCCcccC
Q 043385 230 K--VAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 230 ~--~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
. ++.| ..|++++.|.||.+-.+
T Consensus 162 s~ala~e~~~~gIrVN~I~PG~i~T~ 187 (254)
T d2gdza1 162 SAALAANLMNSGVRLNAICPGFVNTA 187 (254)
T ss_dssp HHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred HHHHHHHhcCCCEEEEEEEcCCCCCh
Confidence 4 3333 58999999999998654
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.84 E-value=6.7e-21 Score=172.32 Aligned_cols=165 Identities=17% Similarity=0.174 Sum_probs=131.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~~ 162 (405)
|.+|||||+++||++++++|+++|++|++++|+++++......+.. ...++..+.+|++|+++++++++.+. +++
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 79 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ--AGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 79 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence 5579999999999999999999999999999988765322222211 12468889999999999998887663 789
Q ss_pred cEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcC-CCEEEEEccccccC---CChhHHHHHHHHH
Q 043385 163 DVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCG-ASHFVLLSAICVQK---PLLEFQRAKLKFE 225 (405)
Q Consensus 163 d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~-v~~~V~~Ss~~~~~---~~~~y~~sK~~~E 225 (405)
|++|||||.... +|+..+++|+.++.++.+++ .+.+ -.+||++||..... ....|+.+|.+.+
T Consensus 80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~ 159 (255)
T d1gega_ 80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR 159 (255)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHH
Confidence 999999997532 34557889999977766653 3444 46899999988763 3467999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.++.| ..|++++.|.||.+-.+.
T Consensus 160 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~ 188 (255)
T d1gega_ 160 GLTQTAARDLAPLGITVNGYCPGIVKTPM 188 (255)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred hhHHHHHHHhhhhCcEEEEEecCcccChH
Confidence 999998876 679999999999997764
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.84 E-value=7.9e-21 Score=171.96 Aligned_cols=169 Identities=16% Similarity=0.162 Sum_probs=132.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|+||||||+++||++++++|+++|++|++++|++++++...+... .....+.++.+|++|.++++++++.+.
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~--~~~~~~~~~~~D~s~~~~~~~~~~~~~~~ 80 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR--EKGLNVEGSVCDLLSRTERDKLMQTVAHV 80 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--hcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999765532222111 112467788999999999888776542
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC---CChhHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK---PLLEFQRAK 221 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~---~~~~y~~sK 221 (405)
+.+|+||||||.... +|...+++|+.++..+.++ +.+.+.+++|++||..+.. ....|+.+|
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK 160 (258)
T d1ae1a_ 81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK 160 (258)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHH
Confidence 579999999997542 3445788999986666554 4556678999999998864 346799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.| ..||++++|.||.+..++
T Consensus 161 ~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~ 193 (258)
T d1ae1a_ 161 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 193 (258)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred HHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcc
Confidence 9999999999887 679999999999998764
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.84 E-value=4.3e-21 Score=171.86 Aligned_cols=165 Identities=10% Similarity=0.118 Sum_probs=130.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCe-------EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFN-------VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~-------V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
+.||||||+++||++++++|+++|++ |++.+|+.++.......+. .....+..+.+|++|+++++++++.+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~--~~g~~~~~~~~Dvt~~~~v~~~~~~~ 79 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR--AEGALTDTITADISDMADVRRLTTHI 79 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHH--TTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 45899999999999999999999987 8899998765432211111 11235788999999999999888765
Q ss_pred C---CCccEEEEcccccCC---------CCcchhHhHHHHHHH----HHHHHHhcCCCEEEEEccccccC---CChhHHH
Q 043385 159 G---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRN----SLVAGRNCGASHFVLLSAICVQK---PLLEFQR 219 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~----ll~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~ 219 (405)
. +++|++|||||.... +++..+++|+.++.. +++.+++.+-+++|++||...+. ....|+.
T Consensus 80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a 159 (240)
T d2bd0a1 80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM 159 (240)
T ss_dssp HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHH
Confidence 3 789999999997542 345578999998555 45556666778999999998874 3468999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|.+.+.+.+.++.| ..|++++.|.||++-.++
T Consensus 160 sK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~ 194 (240)
T d2bd0a1 160 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 194 (240)
T ss_dssp HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCch
Confidence 999999999998876 679999999999997664
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=8.6e-21 Score=171.68 Aligned_cols=171 Identities=17% Similarity=0.222 Sum_probs=131.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|+||||||+++||+++++.|+++|++|++.+|++++.....+.+........+.++++|++|+++++++++.+.
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~ 86 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 86 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 367899999999999999999999999999999999876654332222222222357888999999999998887663
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcC--CCEEEEEccccccC--C---ChhHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCG--ASHFVLLSAICVQK--P---LLEFQ 218 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~--v~~~V~~Ss~~~~~--~---~~~y~ 218 (405)
+++|++|||||.... .++..+++|+.+...+.+ .+++.+ -+++|++||...+. | ...|+
T Consensus 87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~ 166 (257)
T d1xg5a_ 87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYS 166 (257)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHH
Confidence 689999999997532 234577889888665544 444544 36999999988752 2 34599
Q ss_pred HHHHHHHHHHHHHhhh----cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE----DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~ 252 (405)
.+|...+.+.+.++.| ..++++++|.||.+-.+.
T Consensus 167 ~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~ 204 (257)
T d1xg5a_ 167 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF 204 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred HHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChh
Confidence 9999999999887754 578999999999886554
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.84 E-value=6.2e-21 Score=171.22 Aligned_cols=165 Identities=15% Similarity=0.088 Sum_probs=128.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC-CCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREK-SGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~ 161 (405)
+.||||||+++||++++++|+++|++|++.+++. +......+.++. ...++..+++|++|+++++++++.+. ++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA--YGGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--HTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH--cCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4799999999999999999999999998876543 332211111111 12367889999999999998887653 68
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHH----HHHHhcCCCEEEEEcccccc---CCChhHHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSL----VAGRNCGASHFVLLSAICVQ---KPLLEFQRAKLKFE 225 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll----~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E 225 (405)
+|++|||||.... +|+..+++|+.++..+. +.+++.+-++||++||..+. .....|+.+|.+.+
T Consensus 80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~ 159 (244)
T d1edoa_ 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI 159 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence 9999999997542 34557889999865554 45566677899999998875 34578999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.++.| .+|+++++|.||++-.+.
T Consensus 160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~ 188 (244)
T d1edoa_ 160 GFSKTAAREGASRNINVNVVCPGFIASDM 188 (244)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred HChHHHHHHHhhhCcEEEEEecceeccHH
Confidence 999998887 689999999999997653
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.83 E-value=2e-20 Score=168.90 Aligned_cols=169 Identities=15% Similarity=0.143 Sum_probs=132.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCC-CHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT-NLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~l~~~~~~~~- 159 (405)
++++|+||||||+++||.+++++|+++|++|+++.|+.++..... .+.......++.++.+|++ +.++++++++.+.
T Consensus 2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALA-ELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHH-HHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHH-HHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999877542111 1112222246888999997 6666776665542
Q ss_pred --CCccEEEEcccccC-CCCcchhHhHHHHHHHHHHHH----Hhc---CCCEEEEEccccccCC---ChhHHHHHHHHHH
Q 043385 160 --TSIDVVVSCLASRS-GGVKDSWKIDYEANRNSLVAG----RNC---GASHFVLLSAICVQKP---LLEFQRAKLKFEA 226 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~-~~~~~~~~~n~~g~~~ll~aa----~~~---~v~~~V~~Ss~~~~~~---~~~y~~sK~~~E~ 226 (405)
+++|++|||||... ..++..+++|+.|+.++..++ .+. ..++||++||..++.+ ...|+.+|++...
T Consensus 81 ~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~ 160 (254)
T d1sbya1 81 QLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVS 160 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHH
T ss_pred HcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHH
Confidence 68999999999764 467789999999977666654 332 2368999999998743 4689999999999
Q ss_pred HHHHHhhh--cCCceEEEEecCCcccC
Q 043385 227 EMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 227 ~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
+.+.++.+ ..|++++.|.||+|..+
T Consensus 161 ~t~~la~el~~~gIrVn~I~PG~v~T~ 187 (254)
T d1sbya1 161 FTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp HHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred HHHHHHhhccccCeEEEEEEeCCCcCc
Confidence 99998876 67999999999999876
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.83 E-value=1.1e-20 Score=172.58 Aligned_cols=170 Identities=14% Similarity=0.147 Sum_probs=131.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++|+++||||+++||++++++|+++|++|++++|+++++......+..... ..++..+.+|++|+++++++++.+.
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999987665322222222111 1357899999999999988887653
Q ss_pred -CCccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC---CChhHHHH
Q 043385 160 -TSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK---PLLEFQRA 220 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~---~~~~y~~s 220 (405)
+++|++|||||.... .|+..+++|+.++..+.++ +++.+-++++++||..... ....|+.+
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~as 161 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA 161 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhh
Confidence 689999999986421 2344678899986655554 4556666888888876653 34679999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+++.+.+.++.| ..|++++.|.||++-.|+
T Consensus 162 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~ 195 (274)
T d1xhla_ 162 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF 195 (274)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred hhHHHHHHHHHHHHHhHhCCceeeeccCCCcCch
Confidence 99999999988876 679999999999998764
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.83 E-value=1.6e-20 Score=171.50 Aligned_cols=170 Identities=15% Similarity=0.151 Sum_probs=128.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
.+++|++|||||+++||+++++.|+++|++|++++|+++++....+.+.... ...++..+.+|++|+++++++++.+.
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999998876532222221111 11357889999999999988887653
Q ss_pred --CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcc-ccccC---CChh
Q 043385 160 --TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSA-ICVQK---PLLE 216 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss-~~~~~---~~~~ 216 (405)
+++|++|||||.... .|...+++|+.++..+.+++ ++.+ .++|+++| .+... ....
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~~~ 160 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLY 160 (272)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHH
T ss_pred HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCcch
Confidence 689999999997532 13346688999866666554 4443 35555554 45443 3467
Q ss_pred HHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 217 FQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|+.+|.+++.+.+.++.| .+|++++.|.||.|-.++
T Consensus 161 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~ 198 (272)
T d1xkqa_ 161 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 198 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred hhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchh
Confidence 999999999999998876 689999999999997664
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.83 E-value=2.2e-20 Score=169.34 Aligned_cols=171 Identities=15% Similarity=0.121 Sum_probs=132.1
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++++|+||||||+++||++++++|+++|++|++++|+.++.......+... ...++..+.+|++|+++++++++.+.
T Consensus 5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~-~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (260)
T d1h5qa_ 5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE-FGVKTKAYQCDVSNTDIVTKTIQQIDA 83 (260)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH-HTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH-hCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999999987654222211111 12478899999999999998887653
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhc-CCCEEEEEcccccc----------CC
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNC-GASHFVLLSAICVQ----------KP 213 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~-~v~~~V~~Ss~~~~----------~~ 213 (405)
+++|++|||||.... ++++.+++|+.++..+.++ +.+. +-++++.+++.... ..
T Consensus 84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~ 163 (260)
T d1h5qa_ 84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLT 163 (260)
T ss_dssp HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECS
T ss_pred HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCcc
Confidence 689999999996532 3445788999986665554 3333 34567777776554 23
Q ss_pred ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 214 LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 214 ~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
...|+.+|.+.+.+.+.++.| ..|+++++|.||.+-.+.
T Consensus 164 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~ 204 (260)
T d1h5qa_ 164 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ 204 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred ccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcc
Confidence 467999999999999998876 689999999999997654
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=2.3e-20 Score=172.20 Aligned_cols=170 Identities=16% Similarity=0.131 Sum_probs=132.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHh-h--hccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEET-L--NQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~-~--~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+++|++|||||+++||++++++|+++|++|++++|+.++.....+.+.. . ....++..+.+|++|+++++++++.+.
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 89 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 89 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999987665322221111 1 112368889999999999998887653
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHH----HhcCCCEEEEEcccccc--CCChhHHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAG----RNCGASHFVLLSAICVQ--KPLLEFQRAK 221 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa----~~~~v~~~V~~Ss~~~~--~~~~~y~~sK 221 (405)
+++|++|||||.... +|+..+++|+.++..+.+++ ++.+-+++|++|+.... .....|+.+|
T Consensus 90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~~~~~~Y~asK 169 (297)
T d1yxma1 90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAAR 169 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCCTTCHHHHHHH
T ss_pred HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccccccccchhHH
Confidence 689999999996532 34557889999977766654 44455688888765443 3457799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+++.+.+.++.| ..||++++|.||.|..+.
T Consensus 170 aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~ 202 (297)
T d1yxma1 170 AGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 202 (297)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred HHHHHHHHHHHHHhcccCceEEEeeeCcCcCcc
Confidence 9999999998876 679999999999998764
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.83 E-value=1.3e-20 Score=171.22 Aligned_cols=169 Identities=13% Similarity=0.128 Sum_probs=127.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN-QLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++|++|||||+++||++++++|+++|++|++++|+++++......+.... ...++..+.+|++|+++++++++.+.
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 82 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 678999999999999999999999999999999999876532222222111 11358899999999999998887653
Q ss_pred -CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEcccc-ccC---CChhH
Q 043385 160 -TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAIC-VQK---PLLEF 217 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~-~~~---~~~~y 217 (405)
+++|++|||||.... +|+..+++|+.+...+.++ +++.+ +++|+++|.. ... ....|
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~Y 161 (264)
T d1spxa_ 83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYY 161 (264)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHH
T ss_pred hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchhh
Confidence 689999999996421 2445778999986655554 44443 4566666554 342 23679
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+.+.+.+.++.| ..|++++.|.||.|-.++
T Consensus 162 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~ 198 (264)
T d1spxa_ 162 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 198 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred hhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence 99999999999998876 679999999999997764
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.83 E-value=2.6e-20 Score=168.02 Aligned_cols=165 Identities=13% Similarity=0.120 Sum_probs=130.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|++|||||+++||++++++|+++|++|++.+|++++.... .+.+ ..+..++.+|++|+++++++++.+.
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~---~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 77 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL---AAEL--GERSMFVRHDVSSEADWTLVMAAVQRR 77 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH---HHHH--CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHh--CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999987654211 1111 2367888999999999988887653
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEccccccC---CChhHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQK---PLLEFQRAKL 222 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~ 222 (405)
+++|++|||||.... +|+..+++|+.++..+.++ +++.+ ++||++||..... ....|+.+|.
T Consensus 78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~~~~Y~asKa 156 (253)
T d1hxha_ 78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKA 156 (253)
T ss_dssp HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccccccccchhH
Confidence 689999999997532 2455788999886655554 44444 7999999998864 3467999999
Q ss_pred HHHHHHHHHhhh--c--CCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--D--SGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~--~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.| . ++++++.|.||.+..+.
T Consensus 157 al~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~ 190 (253)
T d1hxha_ 157 AVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM 190 (253)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred HHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh
Confidence 999999988765 2 46999999999997764
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.82 E-value=7e-20 Score=167.43 Aligned_cols=165 Identities=14% Similarity=0.114 Sum_probs=129.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+++|+||||||+++||++++++|+++|++|++++|+++++.+. .... ..++..+.+|++|+++++++++.+.
T Consensus 2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~---~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (276)
T d1bdba_ 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAEL---ETDH--GDNVLGIVGDVRSLEDQKQAASRCVAR 76 (276)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---HHHH--GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---HHHc--CCCeeEEecccccHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999987654211 1111 2368889999999999988877653
Q ss_pred -CCccEEEEcccccCC--------------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccC---CChhH
Q 043385 160 -TSIDVVVSCLASRSG--------------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~--------------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~---~~~~y 217 (405)
+++|++|||||.... .|++.+++|+.++..+.+ .+++.+ +++|+++|..... ....|
T Consensus 77 ~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y 155 (276)
T d1bdba_ 77 FGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLY 155 (276)
T ss_dssp HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHH
T ss_pred hCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchH
Confidence 689999999996421 144567899988555544 455555 6899999887763 34679
Q ss_pred HHHHHHHHHHHHHHhhh-cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE-DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~-~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+++.+.+.++.| ..+++++.|.||.|-.++
T Consensus 156 ~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~ 191 (276)
T d1bdba_ 156 TAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDL 191 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCc
Confidence 99999999999998876 345999999999986653
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=9.5e-20 Score=163.55 Aligned_cols=163 Identities=15% Similarity=0.146 Sum_probs=132.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+++|++|||||+++||+++++.|+++|++|++++|+++++ +......+++...+|+.+.+.++...+.+ ++
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~ 74 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL-------QELEKYPGIQTRVLDVTKKKQIDQFANEV-ER 74 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-------GGGGGSTTEEEEECCTTCHHHHHHHHHHC-SC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-------HHHHhccCCceeeeecccccccccccccc-cc
Confidence 37899999999999999999999999999999999987654 33344457899999999988877776654 67
Q ss_pred ccEEEEcccccCC---------CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEcccccc----CCChhHHHHHHHH
Q 043385 162 IDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQ----KPLLEFQRAKLKF 224 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~----~~~~~y~~sK~~~ 224 (405)
+|++|||+|.... .|...+++|+.++..+.++ +.+.+-+++|++||.... .....|+.+|.+.
T Consensus 75 id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal 154 (245)
T d2ag5a1 75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAV 154 (245)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHH
T ss_pred ceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHH
Confidence 9999999997643 3345778999986666554 445566799999987542 3447899999999
Q ss_pred HHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 225 EAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 225 E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+++.++.| .+|+++++|.||.+-.+.
T Consensus 155 ~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~ 184 (245)
T d2ag5a1 155 IGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184 (245)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred HHHHHHHHHHhhhhCcEEEEEeeceeechh
Confidence 9999998887 679999999999997764
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.81 E-value=2.6e-19 Score=159.59 Aligned_cols=156 Identities=20% Similarity=0.234 Sum_probs=123.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+++|+||||||+++||++++++|+++|++|++++|+++. +.. .+.+++.+|+++. ++.+++.+ +++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~----------l~~-~~~~~~~~Dv~~~--~~~~~~~~-g~i 67 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----------LKR-SGHRYVVCDLRKD--LDLLFEKV-KEV 67 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----------HHH-TCSEEEECCTTTC--HHHHHHHS-CCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH----------HHh-cCCcEEEcchHHH--HHHHHHHh-CCC
Confidence 578999999999999999999999999999999998643 222 2567889999864 44444443 569
Q ss_pred cEEEEcccccCC---------CCcchhHhHHHHHHHH----HHHHHhcCCCEEEEEccccccC---CChhHHHHHHHHHH
Q 043385 163 DVVVSCLASRSG---------GVKDSWKIDYEANRNS----LVAGRNCGASHFVLLSAICVQK---PLLEFQRAKLKFEA 226 (405)
Q Consensus 163 d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~l----l~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~~E~ 226 (405)
|++|||||.... +|++.+++|+.++..+ ++.+++.+-+++|++||..... ....|..+|.+.+.
T Consensus 68 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ 147 (234)
T d1o5ia_ 68 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTG 147 (234)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred cEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHH
Confidence 999999996532 2345678899885554 4455666777999999988764 34679999999999
Q ss_pred HHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 227 EMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 227 ~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.++.| ..|+++++|.||++-.+.
T Consensus 148 ltk~lA~ela~~gIrVN~I~PG~v~T~~ 175 (234)
T d1o5ia_ 148 FLKTLSFEVAPYGITVNCVAPGWTETER 175 (234)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHhcccCeEEeecccCccchhh
Confidence 99988876 679999999999998765
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.81 E-value=2.3e-19 Score=161.54 Aligned_cols=165 Identities=12% Similarity=0.169 Sum_probs=127.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHh---CCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh---
Q 043385 85 DINILVVGSTGYIGKFVVEELVS---RGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL--- 158 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--- 158 (405)
||+||||||+++||++++++|++ +|++|++.+|++++..... +......++.++.+|++|+++++++++.+
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 78 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE---DLAKNHSNIHILEIDLRNFDAYDKLVADIEGV 78 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH---HHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH---HHHhcCCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence 57899999999999999999974 6899999999988764221 22233468999999999999988887754
Q ss_pred --CCCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHH----HHhc-----------CCCEEEEEcccccc
Q 043385 159 --GTSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVA----GRNC-----------GASHFVLLSAICVQ 211 (405)
Q Consensus 159 --~~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~a----a~~~-----------~v~~~V~~Ss~~~~ 211 (405)
.+++|++|||||.... .+++.+++|+.|+..+.++ +++. +.+++|++||....
T Consensus 79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~ 158 (248)
T d1snya_ 79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS 158 (248)
T ss_dssp HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence 1579999999996432 1334778999996665554 3332 34689999998654
Q ss_pred ------CCChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 212 ------KPLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 212 ------~~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.....|+.+|.+...+.+.++.+ ..|++++.|.||+|--++
T Consensus 159 ~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m 207 (248)
T d1snya_ 159 IQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207 (248)
T ss_dssp STTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence 12357999999999999888765 679999999999997664
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=1.4e-19 Score=166.10 Aligned_cols=168 Identities=13% Similarity=0.100 Sum_probs=126.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchh---Hhhh-ccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKE---ETLN-QLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~---~~~~-~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+|.||||||+++||+++++.|+++|++|+.+.+...+.....+.. ..+. ...++..+.+|++|++++.++++.+.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 467899999999999999999999988666554333222111111 1111 22478899999999999999988754
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHH----HHHHhcCCCEEEEEccccccC---CChhHHHHHHH
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSL----VAGRNCGASHFVLLSAICVQK---PLLEFQRAKLK 223 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll----~aa~~~~v~~~V~~Ss~~~~~---~~~~y~~sK~~ 223 (405)
+.+|++|||+|.... .+...+++|+.|+.++. ..+++.+-++||++||..+.. ....|+.+|++
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaa 161 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA 161 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHH
Confidence 679999999987542 23457889999855544 456677778999999998864 34679999999
Q ss_pred HHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.++.| ..|+++++|.||+|--++
T Consensus 162 l~~l~~~la~El~~~gIrVn~V~PG~v~T~~ 192 (285)
T d1jtva_ 162 LEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (285)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCCCCChH
Confidence 99999988876 679999999999997653
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.81 E-value=1.2e-19 Score=167.67 Aligned_cols=171 Identities=13% Similarity=0.076 Sum_probs=129.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCC--CchhHhh-hc-cCCcEEEEcCCCCHHHHHHHHH
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGR--NDKEETL-NQ-LQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~--~~~~~~~-~~-~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
+.+++|++|||||+++||++++++|+++|++|++.+|+.+..... ....+.. .. ......+.+|+.|.+++++.++
T Consensus 3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 82 (302)
T d1gz6a_ 3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK 82 (302)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence 356899999999999999999999999999999999876543211 1111111 11 1234566789999887777665
Q ss_pred hh---CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEcccccc---CCChhH
Q 043385 157 NL---GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQ---KPLLEF 217 (405)
Q Consensus 157 ~~---~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~---~~~~~y 217 (405)
.+ .+++|++|||||.... +|+..+++|+.++.++.+ .+++.+-++||++||..+. .....|
T Consensus 83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y 162 (302)
T d1gz6a_ 83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANY 162 (302)
T ss_dssp HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHH
Confidence 44 2689999999997542 345578999999665555 4566677899999998875 345789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
+.+|.+.+.+.+.++.| .+||++++|.||.+-.+
T Consensus 163 ~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~ 198 (302)
T d1gz6a_ 163 SAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRM 198 (302)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTT
T ss_pred HHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcc
Confidence 99999999999998886 67999999999987554
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=1.3e-19 Score=164.17 Aligned_cols=172 Identities=13% Similarity=0.150 Sum_probs=134.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHh---CCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVS---RGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.+++|.++||||+++||++++++|++ +|++|++++|+++++......+.......++..+.+|++|+++++++++.+
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~ 82 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 57789999999999999999999986 799999999988765432222222212235788999999999998887643
Q ss_pred C-------CCccEEEEcccccCC------------CCcchhHhHHHHHHHHHHHHHh----cC--CCEEEEEccccccCC
Q 043385 159 G-------TSIDVVVSCLASRSG------------GVKDSWKIDYEANRNSLVAGRN----CG--ASHFVLLSAICVQKP 213 (405)
Q Consensus 159 ~-------~~~d~Vv~~a~~~~~------------~~~~~~~~n~~g~~~ll~aa~~----~~--v~~~V~~Ss~~~~~~ 213 (405)
. ..+|++|||||.... .++..+++|+.+...+.+++.. .+ .++||++||.....|
T Consensus 83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~ 162 (259)
T d1oaaa_ 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence 1 367899999986421 2344778999998887777643 32 358999999988644
Q ss_pred ---ChhHHHHHHHHHHHHHHHhhhcCCceEEEEecCCcccCch
Q 043385 214 ---LLEFQRAKLKFEAEMMKVAEEDSGFTYSIVRPTAFFKSLG 253 (405)
Q Consensus 214 ---~~~y~~sK~~~E~~~~~~~~~~~gi~~~ilRp~~v~g~~~ 253 (405)
...|+.+|.+.+.+.+.++.|..|++++.|.||.+..++.
T Consensus 163 ~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~ 205 (259)
T d1oaaa_ 163 YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQ 205 (259)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHH
Confidence 4789999999999999999888999999999999987643
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.80 E-value=2.1e-19 Score=162.54 Aligned_cols=169 Identities=18% Similarity=0.123 Sum_probs=129.2
Q ss_pred CCCCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 81 KNPKDINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 81 ~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
.++++|++|||||+| +||++++++|+++|++|++.+|++..... ..+..........+++|++|+++++++++.+
T Consensus 4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (256)
T d1ulua_ 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE---AEKLAEALGGALLFRADVTQDEELDALFAGV 80 (256)
T ss_dssp ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH---HHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH---HHHhhhccCcccccccccCCHHHHHHHHHHH
Confidence 367899999999998 89999999999999999988887543211 1112222346788999999999998888765
Q ss_pred C---CCccEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC---CChhH
Q 043385 159 G---TSIDVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK---PLLEF 217 (405)
Q Consensus 159 ~---~~~d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~---~~~~y 217 (405)
. +++|++||||+.... ++...+++|+.+...+.+++... .-+++|++||..... ....|
T Consensus 81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y 160 (256)
T d1ulua_ 81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVM 160 (256)
T ss_dssp HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHH
Confidence 3 689999999986431 12236788898888888776543 125899999988764 45789
Q ss_pred HHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 218 QRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 218 ~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+|.+++.+.+.++.| .+|++++.|.||.+..+.
T Consensus 161 ~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~ 197 (256)
T d1ulua_ 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeecc
Confidence 99999999999998886 679999999999987653
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.80 E-value=2e-19 Score=161.03 Aligned_cols=164 Identities=16% Similarity=0.212 Sum_probs=130.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc-CCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL-QGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
+++|++|||||+++||+++++.|+++|++|++.+|+.++.. +..... .++..+++|++|+++++++++.+.
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~ 76 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLA------EAVAALEAEAIAVVADVSDPKAVEAVFAEALEE 76 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH------HHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH------HHHHHcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999876542 222222 367889999999999998887663
Q ss_pred -CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccC--CChhHHHHHHHHH
Q 043385 160 -TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQK--PLLEFQRAKLKFE 225 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~--~~~~y~~sK~~~E 225 (405)
+++|++||||+.... .|.+.+++|+.+...+.+++... +-+.++++|+.+... ....|+.+|.+.|
T Consensus 77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~~~~Y~~sK~al~ 156 (241)
T d2a4ka1 77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVV 156 (241)
T ss_dssp HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHHHHHHHHCSSHHH
T ss_pred hCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccCccccchhhHHHH
Confidence 689999999986532 34457889999988888876543 234566666665543 2357999999999
Q ss_pred HHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.++.| ..|+++++|.||.+-.+.
T Consensus 157 ~lt~~lA~el~~~gIrvN~I~PG~v~T~~ 185 (241)
T d2a4ka1 157 GLARTLALELARKGVRVNVLLPGLIQTPM 185 (241)
T ss_dssp HHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred HHHHHHHHHHhHhCCEEeeeccCcCCCHH
Confidence 999999887 678999999999996653
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.79 E-value=4.6e-19 Score=160.58 Aligned_cols=165 Identities=21% Similarity=0.270 Sum_probs=131.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC--C
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG--T 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~--~ 160 (405)
+.+||||||+|+||++++++|+++|+ +|+++.|+..+..........+.. ..++.++.+|++|+++++++++.+. +
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~ 88 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV 88 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence 36999999999999999999999998 588888876544333332233322 2468899999999999999988764 4
Q ss_pred CccEEEEcccccCCC---------CcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc---CCChhHHHHHHHHHHHH
Q 043385 161 SIDVVVSCLASRSGG---------VKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ---KPLLEFQRAKLKFEAEM 228 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~---------~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~---~~~~~y~~sK~~~E~~~ 228 (405)
++|.||||+|..... +...+++|+.+..++.+++...+.++||++||.... .....|+.+|...+.+.
T Consensus 89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la 168 (259)
T d2fr1a1 89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLA 168 (259)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHH
T ss_pred cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHHhHHHHH
Confidence 799999999976432 233678999999999999888888899999999875 34567999999999988
Q ss_pred HHHhhhcCCceEEEEecCCcccC
Q 043385 229 MKVAEEDSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 229 ~~~~~~~~gi~~~ilRp~~v~g~ 251 (405)
+.+.. .|++++.|.||.+.++
T Consensus 169 ~~~~~--~Gi~v~~I~pg~~~~~ 189 (259)
T d2fr1a1 169 QQRRS--DGLPATAVAWGTWAGS 189 (259)
T ss_dssp HHHHH--TTCCCEEEEECCBC--
T ss_pred HHHHh--CCCCEEECCCCcccCC
Confidence 88775 7999999999988765
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.79 E-value=8e-19 Score=160.09 Aligned_cols=169 Identities=18% Similarity=0.155 Sum_probs=130.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhh-hccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETL-NQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
++++|++|||||+++||++++++|+++|++|++++|+.++.. ....+.+ .....+.++.+|++|++++.+.++.+.
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~--~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 92 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESA--EEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK 92 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH--HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHH--HHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999998754321 0011112 222468889999999999988887653
Q ss_pred --CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc----CCChhHHHHHH
Q 043385 160 --TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ----KPLLEFQRAKL 222 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~----~~~~~y~~sK~ 222 (405)
+++|++|||++.... .+.+.+++|+.++..+.+++... .-+++++++|.... .....|+.+|+
T Consensus 93 ~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKa 172 (272)
T d1g0oa_ 93 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKG 172 (272)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHH
T ss_pred HhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHH
Confidence 689999999997542 23447789999988888776542 12477778776533 34467999999
Q ss_pred HHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 223 KFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 223 ~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+.+.+.+.++.+ ..|++++.|.||.+-.+.
T Consensus 173 al~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~ 204 (272)
T d1g0oa_ 173 AIETFARCMAIDMADKKITVNVVAPGGIKTDM 204 (272)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred HHHHHHHHHHHHhchhCeEEEEEccCCcCChH
Confidence 999999988876 679999999999997653
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.79 E-value=3.9e-19 Score=160.98 Aligned_cols=170 Identities=15% Similarity=0.121 Sum_probs=127.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhc-cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQ-LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.++.+|+||||||+++||.+++++|+++|++|++..|+.++... ...+.+.. ..++..+.+|++|++++++.++.+.
T Consensus 2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~--~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 79 (259)
T d1ja9a_ 2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAE--EVVAELKKLGAQGVAIQADISKPSEVVALFDKAV 79 (259)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH--HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHH--HHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999999987776543210 01112222 2468899999999999988887553
Q ss_pred ---CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccc-c---CCChhHHHHH
Q 043385 160 ---TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICV-Q---KPLLEFQRAK 221 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~-~---~~~~~y~~sK 221 (405)
+++|++|||||.... .++..+++|+.+...+++++... .-++++.++|... . .....|+.+|
T Consensus 80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK 159 (259)
T d1ja9a_ 80 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSK 159 (259)
T ss_dssp HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred HHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHH
Confidence 679999999997542 23357789999877777766442 1235666655433 3 3456799999
Q ss_pred HHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 222 LKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 222 ~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.+.+.++.+ ..|+++++|.||++-.+.
T Consensus 160 ~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~ 192 (259)
T d1ja9a_ 160 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM 192 (259)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred HHHHHHHHHHHHHHhhcCeEEeccCcCCccChh
Confidence 9999999998886 679999999999997653
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.78 E-value=1.5e-19 Score=163.08 Aligned_cols=157 Identities=11% Similarity=0.065 Sum_probs=121.2
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---CCcc
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG---TSID 163 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~---~~~d 163 (405)
++|||||+++||++++++|+++|++|++.+|+.+... .+... ......+|+.|.++++++++.+. +++|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~-------~~~~~-~~~~~~~dv~~~~~~~~~~~~~~~~~G~iD 73 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD-------ELEAF-AETYPQLKPMSEQEPAELIEAVTSAYGQVD 73 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHH-------HHHHH-HHHCTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-------HHHhh-hCcEEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999999999876542 12111 11233578887777776665542 6899
Q ss_pred EEEEcccccCC----------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccCC---ChhHHHHHHHHHH
Q 043385 164 VVVSCLASRSG----------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQKP---LLEFQRAKLKFEA 226 (405)
Q Consensus 164 ~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~~~E~ 226 (405)
++|||||.... +|+..+++|+.+...+.+ .+++.+-++||++||.....+ ...|+.+|.+++.
T Consensus 74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~ 153 (252)
T d1zmta1 74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT 153 (252)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHH
Confidence 99999986421 233466889888555544 456667789999999988744 3679999999999
Q ss_pred HHHHHhhh--cCCceEEEEecCCcccC
Q 043385 227 EMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 227 ~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
+.+.++.| .+|++++.|.||.+-.+
T Consensus 154 lt~~lA~ela~~gIrVN~I~PG~i~T~ 180 (252)
T d1zmta1 154 LANALSKELGEYNIPVFAIGPNYLHSE 180 (252)
T ss_dssp HHHHHHHHHGGGTCCEEEEEESSBCCB
T ss_pred HHHHHHHHhcccCcEEEEEecCCCcCc
Confidence 99998876 68999999999999765
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=5.4e-19 Score=161.56 Aligned_cols=166 Identities=16% Similarity=0.137 Sum_probs=126.9
Q ss_pred CCeE-EEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC---
Q 043385 85 DINI-LVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--- 159 (405)
Q Consensus 85 ~~~v-lVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--- 159 (405)
+|+| |||||+++||.+++++|+++ |++|++.+|++++.....+.+.. ...++.++.+|++|.++++++++.+.
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~ 79 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA--EGLSPRFHQLDIDDLQSIRALRDFLRKEY 79 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh--cCCcEEEEEEecCCHHHHHHHHHHHHHhc
Confidence 4555 89999999999999999986 89999999998765432222221 23478999999999999988877653
Q ss_pred CCccEEEEcccccCC---------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEcccccc-----------------
Q 043385 160 TSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQ----------------- 211 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~----------------- 211 (405)
+++|++|||||.... +++..+++|+.|+..+.+++... .-+|+|++||....
T Consensus 80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~ 159 (275)
T d1wmaa1 80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE 159 (275)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhccc
Confidence 689999999997542 23346789999988888877542 12589999996431
Q ss_pred ---------------------------CCChhHHHHHHHHHHHHHHHhhh------cCCceEEEEecCCcccCc
Q 043385 212 ---------------------------KPLLEFQRAKLKFEAEMMKVAEE------DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 212 ---------------------------~~~~~y~~sK~~~E~~~~~~~~~------~~gi~~~ilRp~~v~g~~ 252 (405)
.+...|+.+|.....+.+.++.+ ..+++++.+.||+|--++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m 233 (275)
T d1wmaa1 160 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 233 (275)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred ccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCc
Confidence 12356999999998877765543 258999999999997664
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1.3e-18 Score=158.40 Aligned_cols=168 Identities=13% Similarity=0.168 Sum_probs=126.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh---
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL--- 158 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~--- 158 (405)
.+++|+||||||+++||++++++|+++|++|++++|+.+++.......... ....+..+.+|+.+.+.+...++.+
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL-GAASAHYIAGTMEDMTFAEQFVAQAGKL 89 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-TCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhh-hcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999999999987653221111111 1235677889999988777665543
Q ss_pred CCCccEEEEcccccCC---------CCcchhHhHHHHHHHHHH----HHHhcCCCEEEEEccccccCC---ChhHHHHHH
Q 043385 159 GTSIDVVVSCLASRSG---------GVKDSWKIDYEANRNSLV----AGRNCGASHFVLLSAICVQKP---LLEFQRAKL 222 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~---------~~~~~~~~n~~g~~~ll~----aa~~~~v~~~V~~Ss~~~~~~---~~~y~~sK~ 222 (405)
.+.+|+++||||.... .+...+++|+.+...+.+ .+++. -+++|++||..++.+ ...|+.+|+
T Consensus 90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKa 168 (269)
T d1xu9a_ 90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKF 168 (269)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred hCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHH
Confidence 2579999999986532 123467889988555444 44443 369999999988743 468999999
Q ss_pred HHHHHHHHHhhh----cCCceEEEEecCCcccC
Q 043385 223 KFEAEMMKVAEE----DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 223 ~~E~~~~~~~~~----~~gi~~~ilRp~~v~g~ 251 (405)
+.+.+.+.++.| ..+++++.+.||.|-.+
T Consensus 169 al~~~~~~La~El~~~~~~I~V~~v~PG~v~T~ 201 (269)
T d1xu9a_ 169 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 201 (269)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred HHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc
Confidence 999999988865 35799999999998764
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.77 E-value=4.1e-18 Score=153.40 Aligned_cols=164 Identities=16% Similarity=0.142 Sum_probs=121.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++|+||||||+++||.+++++|+++|+ .|++..|+.++..+ +... ...++.++.+|++|.++++++++.+.
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~----l~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 76 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE----LKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH----HHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHH----HHHh-hCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence 458999999999999999999999995 68888998876521 1111 12478999999999999888876542
Q ss_pred ---CCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHH----Hhc-----------CCCEEEEEcccccc
Q 043385 160 ---TSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAG----RNC-----------GASHFVLLSAICVQ 211 (405)
Q Consensus 160 ---~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa----~~~-----------~v~~~V~~Ss~~~~ 211 (405)
.++|++|||||.... ++++.+++|+.|+..+.+++ ++. ...++|.+|+....
T Consensus 77 ~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~ 156 (250)
T d1yo6a1 77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred hCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence 249999999996421 13347889999976665543 322 12478888876543
Q ss_pred ----------CCChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 212 ----------KPLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 212 ----------~~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+...|+.||++...+.+.++.+ ..|++++.|.||+|--++
T Consensus 157 ~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m 209 (250)
T d1yo6a1 157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209 (250)
T ss_dssp STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred ccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC
Confidence 23456999999999999988876 679999999999986653
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.77 E-value=2.9e-18 Score=158.21 Aligned_cols=171 Identities=14% Similarity=0.144 Sum_probs=127.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh--
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL-- 158 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-- 158 (405)
.++++|++|||||+|+||++++++|+++|++|++++|+.++.......+.... ...+..+.+|++|.++++++++.+
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~ 99 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIK 99 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhhhh
Confidence 36889999999999999999999999999999999999865432222221111 246788999999999988877654
Q ss_pred -CCCccEEEEcccccCCC---------CcchhHhHHHHHHHHHHHH----Hh-cCCCEEEEEcccccc---CCChhHHHH
Q 043385 159 -GTSIDVVVSCLASRSGG---------VKDSWKIDYEANRNSLVAG----RN-CGASHFVLLSAICVQ---KPLLEFQRA 220 (405)
Q Consensus 159 -~~~~d~Vv~~a~~~~~~---------~~~~~~~n~~g~~~ll~aa----~~-~~v~~~V~~Ss~~~~---~~~~~y~~s 220 (405)
.+++|++|||||..... +...+.+|..+...+...+ .. .+...++.+||.... .....|+.+
T Consensus 100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysas 179 (294)
T d1w6ua_ 100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASA 179 (294)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHH
Confidence 26899999999975432 2235567777755544432 22 334567777776654 345679999
Q ss_pred HHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 221 KLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 221 K~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|.+.+.+.+.++.+ ..|+++++|.||.+..+.
T Consensus 180 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~ 213 (294)
T d1w6ua_ 180 KAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 213 (294)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred HHHHHHHHHHHHHHHhHhCeEEEEEccCccccch
Confidence 99999999998876 679999999999997653
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.74 E-value=9.3e-18 Score=149.66 Aligned_cols=157 Identities=15% Similarity=0.175 Sum_probs=118.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh-----
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL----- 158 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~----- 158 (405)
++|+||||||+|+||+++++.|+++|++|.++++.+.... .....+..|..+.+..+...+.+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLLG 68 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------cccceeecccCcHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999999999998765421 12234455666555544333322
Q ss_pred CCCccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccCC---ChhHHHHHHH
Q 043385 159 GTSIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQKP---LLEFQRAKLK 223 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~~---~~~y~~sK~~ 223 (405)
.+++|++|||||.... .++..+++|+.+..++.+++... +-++||++||..+..+ ...|+.+|.+
T Consensus 69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 148 (236)
T d1dhra_ 69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGA 148 (236)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHH
Confidence 1469999999985321 23346789999987777766542 2368999999987643 4689999999
Q ss_pred HHHHHHHHhhh----cCCceEEEEecCCcccCc
Q 043385 224 FEAEMMKVAEE----DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 224 ~E~~~~~~~~~----~~gi~~~ilRp~~v~g~~ 252 (405)
++.+.+.++.| ..|++++.|.||.+..|+
T Consensus 149 l~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~ 181 (236)
T d1dhra_ 149 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM 181 (236)
T ss_dssp HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH
T ss_pred HHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc
Confidence 99999999876 258999999999998764
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=3.3e-17 Score=147.17 Aligned_cols=166 Identities=15% Similarity=0.204 Sum_probs=128.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
++++|++|||||+++||.+++++|+++|++|++++|+.++.... .+.+ .........|+.+.+.+++..+.+.
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~---~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQ---AKKL--GNNCVFAPADVTSEKDVQTALALAKGK 76 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHH---HHHH--CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHHh--CCCcccccccccccccccccccccccc
Confidence 47899999999999999999999999999999999998765311 1111 2367888899999887766554431
Q ss_pred -CCccEEEEcccccCC---------------CCcchhHhHHHHHHHHHHHHHhc----------CCCEEEEEccccccC-
Q 043385 160 -TSIDVVVSCLASRSG---------------GVKDSWKIDYEANRNSLVAGRNC----------GASHFVLLSAICVQK- 212 (405)
Q Consensus 160 -~~~d~Vv~~a~~~~~---------------~~~~~~~~n~~g~~~ll~aa~~~----------~v~~~V~~Ss~~~~~- 212 (405)
...|.++++++.... .+...+++|+.++.++.+++... +-++||++||...+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~ 156 (248)
T d2o23a1 77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG 156 (248)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence 458999988764321 23346789999988877776331 335899999998863
Q ss_pred --CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 213 --PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 213 --~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
....|+.+|.+.+.+.+.++.| ..|++++.|.||.+..++
T Consensus 157 ~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~ 200 (248)
T d2o23a1 157 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 200 (248)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecch
Confidence 4578999999999999998886 679999999999987764
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.73 E-value=2e-17 Score=147.43 Aligned_cols=155 Identities=15% Similarity=0.174 Sum_probs=116.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh-----CC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL-----GT 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~ 160 (405)
.|||||||+|+||++++++|+++|++|++++|++.... .....+.+|+++.+......+.+ .+
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQGS 70 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc------------cccceeccccCchhHHHHHHHHHHHHhcCC
Confidence 57999999999999999999999999999999876431 12234456777665544332221 16
Q ss_pred CccEEEEcccccCC----------CCcchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccCC---ChhHHHHHHHHH
Q 043385 161 SIDVVVSCLASRSG----------GVKDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQKP---LLEFQRAKLKFE 225 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~----------~~~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~~---~~~y~~sK~~~E 225 (405)
++|+||||||.... .++..+++|+.++..+.+++... +-++||++||.....+ ...|+.+|++++
T Consensus 71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~ 150 (235)
T d1ooea_ 71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVH 150 (235)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHH
Confidence 79999999996321 12336788999987777766542 1258999999887643 478999999999
Q ss_pred HHHHHHhhh----cCCceEEEEecCCcccCc
Q 043385 226 AEMMKVAEE----DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 226 ~~~~~~~~~----~~gi~~~ilRp~~v~g~~ 252 (405)
.+.+.++.| ..+++++.|.||.+-.+.
T Consensus 151 ~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~ 181 (235)
T d1ooea_ 151 HLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM 181 (235)
T ss_dssp HHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred HHHHHHHHHhccCCCceEEEEEecCcCcCcc
Confidence 999999875 258899999999987654
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.66 E-value=7.2e-16 Score=139.07 Aligned_cols=167 Identities=19% Similarity=0.151 Sum_probs=125.1
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-
Q 043385 83 PKDINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG- 159 (405)
Q Consensus 83 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~- 159 (405)
+++|+||||||+| +||+++++.|+++|++|++.+|+++... ...+..........+..|+.+..++...++.+.
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKG---RVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK 79 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHH---HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHH---HHHHHHhhcCCcceeecccchHHHHHHHHHHhhh
Confidence 5789999999998 8999999999999999999999864321 111222333467888999999988887776542
Q ss_pred --CCccEEEEcccccCCCC--------------cchhHhHHHHHHHHHHHHHhc--CCCEEEEEccccccCC---ChhHH
Q 043385 160 --TSIDVVVSCLASRSGGV--------------KDSWKIDYEANRNSLVAGRNC--GASHFVLLSAICVQKP---LLEFQ 218 (405)
Q Consensus 160 --~~~d~Vv~~a~~~~~~~--------------~~~~~~n~~g~~~ll~aa~~~--~v~~~V~~Ss~~~~~~---~~~y~ 218 (405)
+.+|++||+++...... ...+.+|+.+...+.+++... +-+.+|++||.+...+ ...|+
T Consensus 80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~ 159 (258)
T d1qsga_ 80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG 159 (258)
T ss_dssp TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHH
T ss_pred cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHH
Confidence 67999999998643211 113345666666666666543 2246899998876633 46799
Q ss_pred HHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 219 RAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 219 ~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
.+|.+.+.+.+.++.+ .+|+++++|+||.|..+.
T Consensus 160 ~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~ 195 (258)
T d1qsga_ 160 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 195 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHHHHhCccCceeeccccccccccc
Confidence 9999999999998886 679999999999998764
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.65 E-value=1.2e-15 Score=136.04 Aligned_cols=154 Identities=18% Similarity=0.203 Sum_probs=116.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC--CCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG--TSI 162 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~--~~~ 162 (405)
.|++|||||+++||++++++|+++|++|++++|+++.. +...+++|+.+......+..... ...
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~--------------~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 66 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE--------------DLIYVEGDVTREEDVRRAVARAQEEAPL 66 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS--------------SSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc--------------cceEeeccccchhhhHHHHHhhhccccc
Confidence 37899999999999999999999999999999987643 45678899998877666554321 245
Q ss_pred cEEEEcccccCC-------------CCcchhHhHHHHHHHHHHHHH----------hcCCCEEEEEcccccc---CCChh
Q 043385 163 DVVVSCLASRSG-------------GVKDSWKIDYEANRNSLVAGR----------NCGASHFVLLSAICVQ---KPLLE 216 (405)
Q Consensus 163 d~Vv~~a~~~~~-------------~~~~~~~~n~~g~~~ll~aa~----------~~~v~~~V~~Ss~~~~---~~~~~ 216 (405)
+.++++++.... .++..+++|+.+...+...+. +.+-++||++||.... .....
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~ 146 (241)
T d1uaya_ 67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA 146 (241)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchh
Confidence 566666553211 123467888888666655432 2234689999998875 34578
Q ss_pred HHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 217 FQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 217 y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
|+.+|.+++.+.+.++.| .+|++++.|.||.+..+.
T Consensus 147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~ 184 (241)
T d1uaya_ 147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL 184 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccc
Confidence 999999999999998886 689999999999997653
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.64 E-value=1.1e-15 Score=139.65 Aligned_cols=162 Identities=16% Similarity=0.052 Sum_probs=114.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcC-CCCchhHhhhccCCcE-----------------EEEcCCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIR-GRNDKEETLNQLQGAS-----------------VCFSDVTN 147 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~-~~~~~~~~~~~~~~v~-----------------~~~~Dl~d 147 (405)
..+|||||+++||++++++|+++|++|++.+|+..... .....+.... ..... ...+|+++
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhc-CCceEEEEeecccccccccccccccccCCC
Confidence 57899999999999999999999999999887654321 0111111111 11223 34466888
Q ss_pred HHHHHHHHHhhC---CCccEEEEcccccCCC---------Cc--------------chhHhHHHHHHHHHHHHHh-----
Q 043385 148 LESLEKSLENLG---TSIDVVVSCLASRSGG---------VK--------------DSWKIDYEANRNSLVAGRN----- 196 (405)
Q Consensus 148 ~~~l~~~~~~~~---~~~d~Vv~~a~~~~~~---------~~--------------~~~~~n~~g~~~ll~aa~~----- 196 (405)
.++++++++.+. +++|++|||||..... ++ ..+.+|+.+...+.+++..
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 888888876543 6899999999975321 11 1456787777776665432
Q ss_pred -----cCCCEEEEEccccccCC---ChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCc
Q 043385 197 -----CGASHFVLLSAICVQKP---LLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAF 248 (405)
Q Consensus 197 -----~~v~~~V~~Ss~~~~~~---~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v 248 (405)
.+..++|+++|.....+ ...|+.+|.+++.+.+.++.+ ..|++++.|.||++
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t 223 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS 223 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccc
Confidence 22347888888877643 468999999999999998876 67999999999964
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.60 E-value=8.3e-15 Score=133.20 Aligned_cols=167 Identities=14% Similarity=0.086 Sum_probs=116.4
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh--
Q 043385 83 PKDINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL-- 158 (405)
Q Consensus 83 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-- 158 (405)
+++|++|||||+| +||.+++++|+++|++|++++|+++... .. .+.........++.+|+++.+++.++++.+
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~-~~--~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 79 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK-RV--RPIAQELNSPYVYELDVSKEEHFKSLYNSVKK 79 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHH-HH--HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH--HHHHhhCCceeEeeecccchhhHHHHHHHHHH
Confidence 6789999999887 8999999999999999999999854221 11 112223356788899999999888877654
Q ss_pred -CCCccEEEEcccccCC-----CC----cchhHhHH----HHHHHHHHHHHhc-CCC-EEEEEcccccc---CCChhHHH
Q 043385 159 -GTSIDVVVSCLASRSG-----GV----KDSWKIDY----EANRNSLVAGRNC-GAS-HFVLLSAICVQ---KPLLEFQR 219 (405)
Q Consensus 159 -~~~~d~Vv~~a~~~~~-----~~----~~~~~~n~----~g~~~ll~aa~~~-~v~-~~V~~Ss~~~~---~~~~~y~~ 219 (405)
.+.+|++|||+|.... .. ...+..+. ............. +-. .++.+|+.+.. .....|+.
T Consensus 80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~a 159 (274)
T d2pd4a1 80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGL 159 (274)
T ss_dssp HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHH
T ss_pred HcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhH
Confidence 2689999999996532 11 11111222 2233333333322 222 45556665544 34467999
Q ss_pred HHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 220 AKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 220 sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
+|...+.+.+.++.+ ..|+++++|.||.+..+.
T Consensus 160 sK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~ 194 (274)
T d2pd4a1 160 AKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 194 (274)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHhhHHHhcCcCceecccccCcccCcc
Confidence 999999999988776 689999999999998754
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.57 E-value=1.6e-14 Score=130.83 Aligned_cols=163 Identities=17% Similarity=0.086 Sum_probs=114.8
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhh--ccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 83 PKDINILVVGST--GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLN--QLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 83 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
+++|+||||||+ .+||++++++|+++|++|++.+|+.++.. +... ...+...+.+|+.+++++.++++.+
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~------~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v 77 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLI------QRITDRLPAKAPLLELDVQNEEHLASLAGRV 77 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHH------HHHHTTSSSCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHH------HHHHHHcCCceeeEeeecccccccccccchh
Confidence 678999999965 46999999999999999999999875431 1111 1236788999999998877776654
Q ss_pred ------CCCccEEEEcccccCC---CCcc-----------hhHhHHHHHHHHHHHHHhcC-CCEEEEEcccccc---CCC
Q 043385 159 ------GTSIDVVVSCLASRSG---GVKD-----------SWKIDYEANRNSLVAGRNCG-ASHFVLLSAICVQ---KPL 214 (405)
Q Consensus 159 ------~~~~d~Vv~~a~~~~~---~~~~-----------~~~~n~~g~~~ll~aa~~~~-v~~~V~~Ss~~~~---~~~ 214 (405)
.+.+|+++||+|.... ...+ .+.+|.........++.... ...++.++|.... ...
T Consensus 78 ~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~ 157 (268)
T d2h7ma1 78 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAY 157 (268)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTT
T ss_pred hhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCccc
Confidence 2568999999996531 1111 22344444444554444332 2244445544443 334
Q ss_pred hhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 215 LEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 215 ~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
..|+.+|.+.+.+.+.++.+ ..|++++.|.||.+-.+
T Consensus 158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~ 196 (268)
T d2h7ma1 158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 196 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred chhhccccchhhccccchhhhhccCCcceEEecCCCCCh
Confidence 67999999999999988876 67999999999998764
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.55 E-value=3.1e-14 Score=128.58 Aligned_cols=165 Identities=16% Similarity=0.119 Sum_probs=108.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCC-CCchhHhhhccCCcEEEEcCCCC----HHHHHHHHHhh--
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRG-RNDKEETLNQLQGASVCFSDVTN----LESLEKSLENL-- 158 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d----~~~l~~~~~~~-- 158 (405)
.++|||||+++||++++++|+++|++|++++|+.++... ....+... .......+..|+.+ .+.+.+.++.+
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA-RAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR 80 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-STTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhh-cCCceEEEecccccchhHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999998764321 11111111 12355666666654 33444444322
Q ss_pred -CCCccEEEEcccccCCCC------------c--------chhHhHHHHHHHHHHHHHh---------cCCCEEEEEccc
Q 043385 159 -GTSIDVVVSCLASRSGGV------------K--------DSWKIDYEANRNSLVAGRN---------CGASHFVLLSAI 208 (405)
Q Consensus 159 -~~~~d~Vv~~a~~~~~~~------------~--------~~~~~n~~g~~~ll~aa~~---------~~v~~~V~~Ss~ 208 (405)
.+++|++|||||...... . ..+..|+.+.......... .....++.+|+.
T Consensus 81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (266)
T d1mxha_ 81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA 160 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence 157999999999754211 0 1223344433333332221 122367777777
Q ss_pred cccC---CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccC
Q 043385 209 CVQK---PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKS 251 (405)
Q Consensus 209 ~~~~---~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~ 251 (405)
.... ....|+.+|...+.+.+.++.+ ..|++++.|.||.+.-+
T Consensus 161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~ 208 (266)
T d1mxha_ 161 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 208 (266)
T ss_dssp GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecc
Confidence 6653 4577999999999999998876 67999999999998754
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.50 E-value=1.2e-13 Score=126.72 Aligned_cols=173 Identities=14% Similarity=0.028 Sum_probs=110.0
Q ss_pred CCCCCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEecCCCCcC---------CCCchhHhhhccCCc-EEEEcC--C
Q 043385 80 NKNPKDINILVVGSTG--YIGKFVVEELVSRGFNVIAIAREKSGIR---------GRNDKEETLNQLQGA-SVCFSD--V 145 (405)
Q Consensus 80 ~~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~l~r~~~~~~---------~~~~~~~~~~~~~~v-~~~~~D--l 145 (405)
..++++|++|||||+| +||++++++|+++|++|++.+|++.... .............+. .....| +
T Consensus 3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T d1d7oa_ 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence 3468899999999987 8999999999999999999998642110 000000000000011 112222 1
Q ss_pred ------------------CCHHHHHHHHHhh---CCCccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHH
Q 043385 146 ------------------TNLESLEKSLENL---GTSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVA 193 (405)
Q Consensus 146 ------------------~d~~~l~~~~~~~---~~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~a 193 (405)
.+...++++++.+ .+++|++|||||.... ++...+++|+.+...+..+
T Consensus 83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~ 162 (297)
T d1d7oa_ 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH 162 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence 1222223333322 2579999999986421 1334678899998888887
Q ss_pred HHhcCC--CEEEEEcccccc----CCChhHHHHHHHHHHHHHHHhhh---cCCceEEEEecCCcccCc
Q 043385 194 GRNCGA--SHFVLLSAICVQ----KPLLEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 194 a~~~~v--~~~V~~Ss~~~~----~~~~~y~~sK~~~E~~~~~~~~~---~~gi~~~ilRp~~v~g~~ 252 (405)
+..... ++++.+++.+.. .....|..+|...+.+.+.++.+ ++|++++.|.||++..+.
T Consensus 163 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~ 230 (297)
T d1d7oa_ 163 FLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRA 230 (297)
T ss_dssp HGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCC
T ss_pred HHHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchh
Confidence 765422 245555555443 34457999999998888776654 368999999999997764
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.49 E-value=2.7e-13 Score=121.67 Aligned_cols=149 Identities=16% Similarity=0.246 Sum_probs=103.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh----CC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL----GT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~----~~ 160 (405)
||.||||||+++||++++++|+++|++|++++|++.+. ..|+.+.+........+ .+
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~-------------------~~d~~~~~~~~~~~~~~~~~~~~ 61 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-------------------IADLSTAEGRKQAIADVLAKCSK 61 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-------------------ECCTTSHHHHHHHHHHHHTTCTT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH-------------------HHHhcCHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999999999976432 35777776665544332 24
Q ss_pred CccEEEEcccccCC--CCcchhHhHHHHHHHHHHH----HHhcCCCEEEEEcccccc-----------------------
Q 043385 161 SIDVVVSCLASRSG--GVKDSWKIDYEANRNSLVA----GRNCGASHFVLLSAICVQ----------------------- 211 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~--~~~~~~~~n~~g~~~ll~a----a~~~~v~~~V~~Ss~~~~----------------------- 211 (405)
.+|+++|||+.... .+.....+|..+...+.+. ..+........+++....
T Consensus 62 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s 141 (257)
T d1fjha_ 62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA 141 (257)
T ss_dssp CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred CCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEee
Confidence 69999999986532 2334556677765555443 344444455555543221
Q ss_pred ----C----CChhHHHHHHHHHHHHHHHhhh--cCCceEEEEecCCcccCc
Q 043385 212 ----K----PLLEFQRAKLKFEAEMMKVAEE--DSGFTYSIVRPTAFFKSL 252 (405)
Q Consensus 212 ----~----~~~~y~~sK~~~E~~~~~~~~~--~~gi~~~ilRp~~v~g~~ 252 (405)
. +...|+.+|.+.+.+.+.++.| .+||+++.|.||++-.+.
T Consensus 142 ~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~ 192 (257)
T d1fjha_ 142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL 192 (257)
T ss_dssp HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred ehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChh
Confidence 0 1235999999999999998876 689999999999997764
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.48 E-value=1.4e-13 Score=128.33 Aligned_cols=166 Identities=14% Similarity=0.036 Sum_probs=113.0
Q ss_pred CCeEEEEc--CCChhHHHHHHHHHhCCCeEEEEecCCCCcCCC--------Cch-h-HhhhccCCcEEEE----------
Q 043385 85 DINILVVG--STGYIGKFVVEELVSRGFNVIAIAREKSGIRGR--------NDK-E-ETLNQLQGASVCF---------- 142 (405)
Q Consensus 85 ~~~vlVtG--atG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~--------~~~-~-~~~~~~~~v~~~~---------- 142 (405)
+|.+|||| ++.+||+++++.|+++|++|++..+........ ... . .............
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence 47899999 557999999999999999999988764311000 000 0 0000001112222
Q ss_pred ----------cCCCCHHHHHHHHHhhC---CCccEEEEcccccCC-----------CCcchhHhHHHHHHHHHHHHHhc-
Q 043385 143 ----------SDVTNLESLEKSLENLG---TSIDVVVSCLASRSG-----------GVKDSWKIDYEANRNSLVAGRNC- 197 (405)
Q Consensus 143 ----------~Dl~d~~~l~~~~~~~~---~~~d~Vv~~a~~~~~-----------~~~~~~~~n~~g~~~ll~aa~~~- 197 (405)
+|+.+.++++++++.+. +++|++|||+|.... +|...+++|+.+...+.+++...
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m 161 (329)
T d1uh5a_ 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence 25556555555554432 689999999986431 23346788888888887777653
Q ss_pred -CCCEEEEEccccccCC----ChhHHHHHHHHHHHHHHHhhh---cCCceEEEEecCCccc
Q 043385 198 -GASHFVLLSAICVQKP----LLEFQRAKLKFEAEMMKVAEE---DSGFTYSIVRPTAFFK 250 (405)
Q Consensus 198 -~v~~~V~~Ss~~~~~~----~~~y~~sK~~~E~~~~~~~~~---~~gi~~~ilRp~~v~g 250 (405)
.-++||.+||.+...+ ...|+.+|..++.+.+.++.| ++||+++.|.||.+--
T Consensus 162 ~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred ccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence 2358999998887642 346899999999999998876 3599999999998865
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.24 E-value=2.6e-12 Score=109.87 Aligned_cols=85 Identities=16% Similarity=0.192 Sum_probs=70.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
.++++|+|+||||+|+||+.+++.|+++|++|++++|+.++..... +.+....++....+|+.|.+.+++++.+
T Consensus 19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~~--- 92 (191)
T d1luaa1 19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA---DSVNKRFKVNVTAAETADDASRAEAVKG--- 92 (191)
T ss_dssp SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH---HHHHHHHTCCCEEEECCSHHHHHHHTTT---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHH---HHHHhccchhhhhhhcccHHHHHHHhcC---
Confidence 4678999999999999999999999999999999999987653221 1222223567788999999999999987
Q ss_pred CccEEEEccccc
Q 043385 161 SIDVVVSCLASR 172 (405)
Q Consensus 161 ~~d~Vv~~a~~~ 172 (405)
+|+||||||..
T Consensus 93 -iDilin~Ag~g 103 (191)
T d1luaa1 93 -AHFVFTAGAIG 103 (191)
T ss_dssp -CSEEEECCCTT
T ss_pred -cCeeeecCccc
Confidence 99999999863
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.68 E-value=4.3e-08 Score=77.74 Aligned_cols=95 Identities=18% Similarity=0.352 Sum_probs=71.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~d~ 164 (405)
|+|+|+|+ |.+|+.+++.|.++|++|++++++++.. +.+...-++.++.||.+|++.++++ ++. +|.
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~-------~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~----a~~ 68 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC-------KKASAEIDALVINGDCTKIKTLEDAGIED----ADM 68 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHHCSSEEEESCTTSHHHHHHTTTTT----CSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhh-------hhhhhhhhhhhccCcccchhhhhhcChhh----hhh
Confidence 78999999 9999999999999999999999988654 2232223788999999999998877 344 899
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEE
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~ 204 (405)
++-+... .+.|+..+ ..+++.+++++|-
T Consensus 69 vv~~t~~--------d~~N~~~~----~~~k~~~~~~iI~ 96 (132)
T d1lssa_ 69 YIAVTGK--------EEVNLMSS----LLAKSYGINKTIA 96 (132)
T ss_dssp EEECCSC--------HHHHHHHH----HHHHHTTCCCEEE
T ss_pred hcccCCc--------HHHHHHHH----HHHHHcCCceEEE
Confidence 9975332 13455433 3456778877764
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.29 E-value=1.9e-06 Score=68.75 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=75.9
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 87 NILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
||.|+||+|.+|++++..|..+| .++++++.++.+.. ...+.+.........-+ ...+..+.+++ +|+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-----a~Dl~~~~~~~~~~~~~-~~~~~~~~~~~----aDi 71 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-----AADLSHIETRATVKGYL-GPEQLPDCLKG----CDV 71 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-----HHHHTTSSSSCEEEEEE-SGGGHHHHHTT----CSE
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-----hHHHhhhhhhcCCCeEE-cCCChHHHhCC----CCE
Confidence 79999999999999999999888 47999987653221 11122211111112112 24556777888 999
Q ss_pred EEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 165 VVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 165 Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
||.+||... ....+..+.|+...+.+++.+++.+.+-+|.+-
T Consensus 72 vVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivv 116 (144)
T d1mlda1 72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII 116 (144)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred EEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 999998643 244568899999999999999998866444443
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.29 E-value=1.7e-06 Score=68.27 Aligned_cols=72 Identities=19% Similarity=0.348 Sum_probs=58.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH-HHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS-LENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~~~~~~~d~ 164 (405)
|+++|.|+ |.+|+++++.|.+.|++|++++.+++.. +.+.. .+..++.||.+|++.+.++ ++. +|.
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~-------~~~~~-~~~~~~~gd~~~~~~l~~a~i~~----a~~ 67 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV-------NAYAS-YATHAVIANATEENELLSLGIRN----FEY 67 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH-------HHTTT-TCSEEEECCTTCTTHHHHHTGGG----CSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHH-------HHHHH-hCCcceeeecccchhhhccCCcc----ccE
Confidence 46888888 9999999999999999999999988654 22333 3678889999999999887 555 899
Q ss_pred EEEccc
Q 043385 165 VVSCLA 170 (405)
Q Consensus 165 Vv~~a~ 170 (405)
||-+.+
T Consensus 68 vi~~~~ 73 (134)
T d2hmva1 68 VIVAIG 73 (134)
T ss_dssp EEECCC
T ss_pred EEEEcC
Confidence 886544
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.19 E-value=2.6e-06 Score=68.03 Aligned_cols=112 Identities=15% Similarity=0.172 Sum_probs=73.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCC--cCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSG--IRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~--~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
|||.|+||+|.+|+.++..|+.+| .++.++++++.. ..+....+..... ..+++....--.|.+ .+++
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~----~l~~-- 74 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR----IIDE-- 74 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG----GGTT--
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHH----Hhcc--
Confidence 689999999999999999999998 589999987532 1111111111111 123444322222332 3445
Q ss_pred CCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEE
Q 043385 160 TSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~ 205 (405)
+|+||-+||.... +..+.++.|..-.+.+++...+.+-+.++.+
T Consensus 75 --aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 75 --SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred --ceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence 9999999996532 3445788999999999999988876555433
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.18 E-value=1.9e-06 Score=69.01 Aligned_cols=112 Identities=13% Similarity=0.155 Sum_probs=74.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHh-hhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEET-LNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
++|||.|.|+ |++|..++..|+.+| .+|+++++++++..+....+.. ...........+|. + .+++
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~~~--- 72 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DCKD--- 72 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GGTT---
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----Hhcc---
Confidence 4579999996 999999999999987 6899999987654322211111 11122345555654 2 2455
Q ss_pred CccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 161 SIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 161 ~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
+|+||.++|... ....+....|+.-.+.+++.+.+.+.+-+|.+-|
T Consensus 73 -adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 73 -ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp -CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred -ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 999999988653 2344577889999999999999988765554443
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.18 E-value=2e-06 Score=71.11 Aligned_cols=75 Identities=20% Similarity=0.355 Sum_probs=58.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
.|+|+|.|| |++|+++++.|.++||+|++++|+.++.. ......+.......+..+.......+.. .|.
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~------~l~~~~~~~~~~~~~~~~~~~~~~~i~~----~~~ 70 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAK------KLSAGVQHSTPISLDVNDDAALDAEVAK----HDL 70 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHH------HHHTTCTTEEEEECCTTCHHHHHHHHTT----SSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHH------HHHhcccccccccccccchhhhHhhhhc----cce
Confidence 489999988 99999999999999999999999987653 2223344555566677777777777776 888
Q ss_pred EEEccc
Q 043385 165 VVSCLA 170 (405)
Q Consensus 165 Vv~~a~ 170 (405)
++.+..
T Consensus 71 ~i~~~~ 76 (182)
T d1e5qa1 71 VISLIP 76 (182)
T ss_dssp EEECSC
T ss_pred eEeecc
Confidence 887543
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=98.05 E-value=9.3e-06 Score=65.49 Aligned_cols=114 Identities=17% Similarity=0.130 Sum_probs=76.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccC--CcEEEEcCCCCHHHHHHHHHhhC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQ--GASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~--~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
.+.+||.|+|+ |.+|+.++..|...+ .++++++.+++...+....+....... ...... ....++++++
T Consensus 5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~-----~~~~~~~~~~-- 76 (154)
T d1pzga1 5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALTG-- 76 (154)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHTT--
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec-----cCchhhhhcC--
Confidence 34679999998 999999998888887 489999988876543322222211111 111111 1123566777
Q ss_pred CCccEEEEcccccCC--------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 160 TSIDVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
.|+|+-++|.... ...+....|..-.+.+++.+++.+.+-+|.+-
T Consensus 77 --adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviiv 129 (154)
T d1pzga1 77 --ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV 129 (154)
T ss_dssp --CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred --CCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEe
Confidence 9999999886431 33457788999999999999998876555443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.01 E-value=9.6e-06 Score=64.97 Aligned_cols=112 Identities=17% Similarity=0.240 Sum_probs=76.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
..++||.|+|| |++|+.++..|+.+| .++++++++++...+....+..... ...+.+..+|. +.+++
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~d- 74 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRD- 74 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTT-
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhcc-
Confidence 34678999997 999999999999987 4799999987654332222222111 12345545553 23455
Q ss_pred CCCccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 043385 159 GTSIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLS 206 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~S 206 (405)
+|+||.++|... ....+....|..-.+.+++..++.+.+ .+|.+|
T Consensus 75 ---aDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt 123 (148)
T d1ldna1 75 ---ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (148)
T ss_dssp ---CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred ---ceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 999999988653 234567888999999999998888755 444444
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.89 E-value=0.0001 Score=53.73 Aligned_cols=89 Identities=17% Similarity=0.222 Sum_probs=62.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+.++++|+|.|. |..|.++++.|.++|++|++.+.+...... +.+. ..+.+..+... . ..+++
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~-----~~~~--~~~~~~~~~~~-~----~~~~~---- 64 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL-----DKLP--EAVERHTGSLN-D----EWLMA---- 64 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG-----GGSC--TTSCEEESBCC-H----HHHHH----
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH-----HHHh--hccceeecccc-h----hhhcc----
Confidence 467899999999 889999999999999999999987653310 1122 25556666543 2 23456
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS 200 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~ 200 (405)
+|.||-.-|.... ..++..|++.|++
T Consensus 65 ~d~vi~SPGi~~~-------------~~~~~~a~~~gi~ 90 (93)
T d2jfga1 65 ADLIVASPGIALA-------------HPSLSAAADAGIE 90 (93)
T ss_dssp CSEEEECTTSCTT-------------SHHHHHHHHTTCE
T ss_pred CCEEEECCCCCCC-------------CHHHHHHHHcCCC
Confidence 8999987665431 1367788888873
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.88 E-value=3.1e-05 Score=61.52 Aligned_cols=108 Identities=17% Similarity=0.168 Sum_probs=71.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHh-CC--CeEEEEecCCCCcCCCCchhHhhhccC---CcEEEEcCCCCHHHHHHHHHhhC
Q 043385 86 INILVVGSTGYIGKFVVEELVS-RG--FNVIAIAREKSGIRGRNDKEETLNQLQ---GASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~-~g--~~V~~l~r~~~~~~~~~~~~~~~~~~~---~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
|||.|+|++|.+|++++-.|.. .+ .++.+++..+ ...+.. ..+.+.. .... ..+-.+. +.+++
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a---~Dl~h~~~~~~~~~-~~~~~~~----~~~~~-- 69 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVA---VDLSHIPTAVKIKG-FSGEDAT----PALEG-- 69 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHH---HHHHTSCSSCEEEE-ECSSCCH----HHHTT--
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHH---HHHHCCccccCCcE-EEcCCCc----cccCC--
Confidence 6899999999999999988764 34 7899998754 222111 1122211 1111 1122222 35666
Q ss_pred CCccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCE-EEEEc
Q 043385 160 TSIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASH-FVLLS 206 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~-~V~~S 206 (405)
.|+||.++|... .+..+..+.|..-.+.+.+.+.+.+.+. +|.+|
T Consensus 70 --aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt 118 (145)
T d2cmda1 70 --ADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (145)
T ss_dssp --CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred --CCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence 999999999653 2445688899999999999999887654 44444
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.85 E-value=2.5e-05 Score=64.80 Aligned_cols=85 Identities=12% Similarity=0.199 Sum_probs=64.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
+.++++|+|.|+ |+.|++++..|.+.|. +|+++.|++++........+.+...-.......|+.+.+.+.+.+..
T Consensus 15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 90 (182)
T d1vi2a1 15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALAS--- 90 (182)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHT---
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcc---
Confidence 467899999999 8999999999999985 79999999876532222222222222455667899999999988887
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
+|+|||+...
T Consensus 91 -~diiIN~Tp~ 100 (182)
T d1vi2a1 91 -ADILTNGTKV 100 (182)
T ss_dssp -CSEEEECSST
T ss_pred -cceeccccCC
Confidence 9999998653
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.84 E-value=4.2e-05 Score=60.74 Aligned_cols=101 Identities=17% Similarity=0.268 Sum_probs=59.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC----CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG----FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
|++|.|.||||++|+.+++.|+++. .+++++.++...... .... .-.....++.+.+ .+++
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~-------~~~~-~~~~~~~~~~~~~----~~~~--- 65 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA-------PSFG-GTTGTLQDAFDLE----ALKA--- 65 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBC-------CGGG-TCCCBCEETTCHH----HHHT---
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccc-------cccc-CCceeeecccchh----hhhc---
Confidence 4689999999999999999888763 357777665443211 0000 1111122333433 3456
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEccccccCCC
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAICVQKPL 214 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~~~~~~~ 214 (405)
+|++|.+++. ...+.+.+.+.++|.+ .+|=.||..=..+.
T Consensus 66 -~DivF~a~~~-------------~~s~~~~~~~~~~g~~~~VID~Ss~fR~~~d 106 (146)
T d1t4ba1 66 -LDIIVTCQGG-------------DYTNEIYPKLRESGWQGYWIDAASSLRMKDD 106 (146)
T ss_dssp -CSEEEECSCH-------------HHHHHHHHHHHHTTCCCEEEECSSTTTTCTT
T ss_pred -CcEEEEecCc-------------hHHHHhhHHHHhcCCCeecccCCcccccCCC
Confidence 9999987752 3355677777777864 34444444433343
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.82 E-value=4e-06 Score=70.19 Aligned_cols=38 Identities=21% Similarity=0.427 Sum_probs=35.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIR 123 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~ 123 (405)
|||.|+||+|.+|+++++.|+++||+|++.+|++++.+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~ 38 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE 38 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 68999999999999999999999999999999987654
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.80 E-value=1.3e-05 Score=66.14 Aligned_cols=103 Identities=20% Similarity=0.245 Sum_probs=65.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCH-HHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNL-ESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~~~~~~~~~ 162 (405)
.+.+|||+||+|.+|...++.....|.+|++.++++++. +..... +...+. |..+. +...+...+ +++
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~-------~~~~~l-Ga~~vi-~~~~~~~~~~~~~~~--~gv 99 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH-------DYLRVL-GAKEVL-AREDVMAERIRPLDK--QRW 99 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH-------HHHHHT-TCSEEE-ECC---------CCS--CCE
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH-------HHHHhc-ccceee-ecchhHHHHHHHhhc--cCc
Confidence 467899999999999999999999999999999988775 333333 222222 33322 112222222 579
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccC
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQK 212 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~ 212 (405)
|+||++.|... ....++..+.. +|+|.++....+.
T Consensus 100 D~vid~vgg~~-------------~~~~l~~l~~~--Griv~~G~~~g~~ 134 (176)
T d1xa0a2 100 AAAVDPVGGRT-------------LATVLSRMRYG--GAVAVSGLTGGAE 134 (176)
T ss_dssp EEEEECSTTTT-------------HHHHHHTEEEE--EEEEECSCCSSSC
T ss_pred CEEEEcCCchh-------------HHHHHHHhCCC--ceEEEeecccCcc
Confidence 99999987432 12233333333 4899888876653
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.78 E-value=3.6e-05 Score=61.00 Aligned_cols=109 Identities=15% Similarity=0.147 Sum_probs=69.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHh-hhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEET-LNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+||.|+|+ |.+|..++-.|+.++ .++++++++++...+....+.. ....+......+| . +.+++ .
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~----~~~~~----a 69 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y----SDVKD----C 69 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---G----GGGTT----C
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---H----HHhCC----C
Confidence 47999997 999999999999997 4899999998765432211111 1111233333333 2 23455 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCE-EEEEc
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASH-FVLLS 206 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~-~V~~S 206 (405)
|+||-+||.... ...+....|..-.+.+++.+++.+.+- +|.+|
T Consensus 70 divvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt 117 (142)
T d1y6ja1 70 DVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 117 (142)
T ss_dssp SEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred ceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence 999999886532 334467889999999999999887654 44443
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.78 E-value=9.8e-05 Score=59.05 Aligned_cols=40 Identities=25% Similarity=0.415 Sum_probs=36.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
.+..+++|.|.||.|.+|+.+++.|.++||+|.+.+|+..
T Consensus 5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~ 44 (152)
T d2pv7a2 5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 44 (152)
T ss_dssp SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence 3456789999999999999999999999999999998764
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.77 E-value=7.9e-05 Score=60.02 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=75.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCcCCCCchhHhhhcc-CCcEE-EEcCCCCHHHHHHHHHhh
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGIRGRNDKEETLNQL-QGASV-CFSDVTNLESLEKSLENL 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~-~~~Dl~d~~~l~~~~~~~ 158 (405)
...+||.|+|+ |.+|+.++-.|+.+|. ++++++++++...+....+...... ..... ..+| .+. +++
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~~----~~~- 88 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YSV----TAN- 88 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GGG----GTT-
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hhh----ccc-
Confidence 34579999997 9999999999999984 8999999876543322222221111 11222 2233 222 445
Q ss_pred CCCccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCE-EEEEc
Q 043385 159 GTSIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASH-FVLLS 206 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~-~V~~S 206 (405)
.|+||..||... .+..+..+.|+.-.+.+++..++.+.+- +|.+|
T Consensus 89 ---adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt 137 (160)
T d1i0za1 89 ---SKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS 137 (160)
T ss_dssp ---CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred ---ccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 999999999753 2345578889999999999999887654 44444
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.77 E-value=3.1e-05 Score=61.41 Aligned_cols=110 Identities=15% Similarity=0.147 Sum_probs=73.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhhcc-CCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLNQL-QGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.||.|+|+ |.+|++++..|+.+| .+++++++++++..+....+...... ....+...+ |.+ .+++ .
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~----~~~d----a 70 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPE----ICRD----A 70 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGG----GGTT----C
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHH----HhhC----C
Confidence 47999997 999999999999998 48999999876543222212221111 233333322 222 2445 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEE-EEEc
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHF-VLLS 206 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~-V~~S 206 (405)
|+||.+||.... ...+....|..-.+.+++.+++.+.+-+ +.+|
T Consensus 71 DvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt 118 (143)
T d1llda1 71 DMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 118 (143)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred cEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 999999997542 3345778899999999999998876544 4444
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.75 E-value=5.7e-05 Score=59.69 Aligned_cols=106 Identities=14% Similarity=0.064 Sum_probs=70.9
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCC--CcCCCCchhHh-hhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKS--GIRGRNDKEET-LNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~--~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
||.|+||+|.+|+.++..|+.+| .++++++.+.. ...+....+.. ........+..+|. ++ +++
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~----~~~---- 70 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED----TAG---- 70 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG----GTT----
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH----hhh----
Confidence 79999999999999999999998 37888886432 21111111111 11123445555553 22 345
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEE
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFV 203 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V 203 (405)
+|+||-+||.... +..+.++.|..-.+.+++..++.+.+-++
T Consensus 71 aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ 115 (142)
T d1o6za1 71 SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYIS 115 (142)
T ss_dssp CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEE
T ss_pred cCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 9999999886432 33457888999999999999998765443
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.75 E-value=0.00014 Score=54.95 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=68.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+.++++|||.|+ |.+|..-++.|++.|.+|++++...... ...+....+++++..++.+.+ +++
T Consensus 9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~------~~~~~~~~~i~~~~~~~~~~d-----l~~---- 72 (113)
T d1pjqa1 9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQ------FTVWANEGMLTLVEGPFDETL-----LDS---- 72 (113)
T ss_dssp CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHH------HHHHHTTTSCEEEESSCCGGG-----GTT----
T ss_pred EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChH------HHHHHhcCCceeeccCCCHHH-----hCC----
Confidence 567899999999 9999999999999999999998765432 123333357888887776543 445
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
++.|+.+.+. -.-...+.+.|++.|+ +|++..
T Consensus 73 ~~lv~~at~d------------~~~n~~i~~~a~~~~i--lVNv~D 104 (113)
T d1pjqa1 73 CWLAIAATDD------------DTVNQRVSDAAESRRI--FCNVVD 104 (113)
T ss_dssp CSEEEECCSC------------HHHHHHHHHHHHHTTC--EEEETT
T ss_pred CcEEeecCCC------------HHHHHHHHHHHHHcCC--EEEeCC
Confidence 8988865331 1223457778888775 677654
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.74 E-value=2.1e-05 Score=65.22 Aligned_cols=104 Identities=19% Similarity=0.201 Sum_probs=65.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEE-cCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCF-SDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~-~Dl~d~~~l~~~~~~~~~~~ 162 (405)
++.+|||+||+|.+|...++.....|++|+++++++++. +.......-.++. -|-...+.+.+...+ .++
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~-------~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~--~Gv 99 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-------AYLKQIGFDAAFNYKTVNSLEEALKKASP--DGY 99 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHTTCSEEEETTSCSCHHHHHHHHCT--TCE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH-------HHHHhhhhhhhcccccccHHHHHHHHhhc--CCC
Confidence 468999999999999999999999999999999987653 3333332222222 222223333333333 469
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
|+||++.|.. .....++.++.. +++|.++....+
T Consensus 100 d~v~D~vG~~-------------~~~~~~~~l~~~--G~~v~~G~~~~~ 133 (182)
T d1v3va2 100 DCYFDNVGGE-------------FLNTVLSQMKDF--GKIAICGAISVY 133 (182)
T ss_dssp EEEEESSCHH-------------HHHHHGGGEEEE--EEEEECCCGGGT
T ss_pred ceeEEecCch-------------hhhhhhhhccCC--CeEEeecceeec
Confidence 9999988731 122333333333 378877665544
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.74 E-value=3.3e-05 Score=63.51 Aligned_cols=102 Identities=18% Similarity=0.268 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+.+|||+||+|.+|...++.+...|++|+++++++++. +..... +...+ .|.++.+..+++.+... ..+
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-------~~~~~~-Ga~~v-i~~~~~~~~~~i~~~t~~~g~ 98 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-------KIVLQN-GAHEV-FNHREVNYIDKIKKYVGEKGI 98 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-------HHHHHT-TCSEE-EETTSTTHHHHHHHHHCTTCE
T ss_pred CCCEEEEEeccccccccccccccccCccccccccccccc-------cccccc-Ccccc-cccccccHHHHhhhhhccCCc
Confidence 467999999999999999999999999999999876543 223333 33222 36666543333332221 469
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
|+||++.|.. .....++.++.. +++|.++..+
T Consensus 99 d~v~d~~g~~-------------~~~~~~~~l~~~--G~iv~~G~~~ 130 (174)
T d1yb5a2 99 DIIIEMLANV-------------NLSKDLSLLSHG--GRVIVVGSRG 130 (174)
T ss_dssp EEEEESCHHH-------------HHHHHHHHEEEE--EEEEECCCCS
T ss_pred eEEeecccHH-------------HHHHHHhccCCC--CEEEEEecCC
Confidence 9999987621 123344444443 4888876443
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.73 E-value=2.4e-05 Score=62.14 Aligned_cols=108 Identities=13% Similarity=0.096 Sum_probs=71.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhh--hccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETL--NQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~--~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
|||.|+|| |.+|+.++..|+..| .+++++++++++........... ......++... .|.+ ++++
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~~d---- 69 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYA----DTAN---- 69 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----GGTT----
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHH----HhcC----
Confidence 68999997 999999999999997 58999999887653221111111 01123444322 2232 2455
Q ss_pred ccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEE
Q 043385 162 IDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVL 204 (405)
Q Consensus 162 ~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~ 204 (405)
+|+||-++|.... ...+..+.|..-.+.+++.+.+.+.+-++.
T Consensus 70 advvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivi 115 (142)
T d1guza1 70 SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIII 115 (142)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred CeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEE
Confidence 9999999986432 334467888888999999998877554443
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.71 E-value=3.8e-05 Score=60.73 Aligned_cols=108 Identities=16% Similarity=0.155 Sum_probs=73.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHh-hhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEET-LNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
|||.|.|+ |.+|+.++..|+.++ .++.++++++++..+....... ...........+|. + .+++ +
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~----~~~~----a 68 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---A----DLKG----S 68 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---G----GGTT----C
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---H----HhcC----C
Confidence 68999997 999999999898887 5899999887654322111111 11123445444442 2 2456 9
Q ss_pred cEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEE
Q 043385 163 DVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205 (405)
Q Consensus 163 d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~ 205 (405)
|+||-++|.... ...+.+..|..-.+.+++...+.+.+-+|.+
T Consensus 69 divvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aiviv 114 (140)
T d1a5za1 69 DVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV 114 (140)
T ss_dssp SEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEE
Confidence 999999987542 2335778899889999999998876545444
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.69 E-value=4.7e-05 Score=60.56 Aligned_cols=107 Identities=18% Similarity=0.265 Sum_probs=71.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhh-hcc-CCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETL-NQL-QGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~-~~~-~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+||.|+|+ |.+|..++-.|+.+| .+++++++++++..+....+... ... .......+| .+. +++
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~----l~~---- 69 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAA----LAD---- 69 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGG----GTT----
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHH----hcc----
Confidence 68999996 999999999999887 58999998876543322212211 111 133444444 322 355
Q ss_pred ccEEEEcccccC-------CCCcchhHhHHHHHHHHHHHHHhcCCCEEEE
Q 043385 162 IDVVVSCLASRS-------GGVKDSWKIDYEANRNSLVAGRNCGASHFVL 204 (405)
Q Consensus 162 ~d~Vv~~a~~~~-------~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~ 204 (405)
+|+||-+||... ....+..+.|..-.+.+.+..++.+.+-+|.
T Consensus 70 adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivi 119 (146)
T d1hyha1 70 ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLV 119 (146)
T ss_dssp CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred ccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence 999999998642 1234567889999999999999887654443
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.69 E-value=2.6e-05 Score=61.79 Aligned_cols=109 Identities=9% Similarity=0.008 Sum_probs=72.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhh-ccC-CcEEEE-cCCCCHHHHHHHHHhhCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLN-QLQ-GASVCF-SDVTNLESLEKSLENLGT 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~-~~~-~v~~~~-~Dl~d~~~l~~~~~~~~~ 160 (405)
|||.|+|+ |.+|..++-.|+.+| .++.+++++++...+....+.... ..+ ...+.. .|. + .+++
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~----~~~~--- 69 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S----LLKG--- 69 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---G----GGTT---
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---H----Hhcc---
Confidence 68999997 999999999999887 479999988765432222121111 111 223332 232 2 3455
Q ss_pred CccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 161 SIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
.|+||-.||.... +..+....|..-.+.+.+.+++.+.+-++.+-
T Consensus 70 -adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivv 117 (142)
T d1ojua1 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVV 117 (142)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEEC
T ss_pred -ccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEe
Confidence 9999998885432 33457788999999999999988765444433
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.66 E-value=4.4e-05 Score=60.98 Aligned_cols=109 Identities=18% Similarity=0.216 Sum_probs=72.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhcc--CCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQL--QGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.||.|+|+ |.+|+.++..|..++ .++.+++++++...+....+...... ....+...| +. +.+++ .
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~----a 72 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAG----A 72 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTT----C
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCC----C
Confidence 58999996 999999998888777 58999999886654322222221111 233333322 22 22345 9
Q ss_pred cEEEEcccccCC--------CCcchhHhHHHHHHHHHHHHHhcCCCEEEEE
Q 043385 163 DVVVSCLASRSG--------GVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205 (405)
Q Consensus 163 d~Vv~~a~~~~~--------~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~ 205 (405)
|+||-++|.... ...+..+.|..-.+.+++.+++.+.+-+|.+
T Consensus 73 dvvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aiviv 123 (150)
T d1t2da1 73 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIV 123 (150)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred cEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 999999986431 1345688899999999999998876654433
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.66 E-value=4.3e-05 Score=61.58 Aligned_cols=112 Identities=14% Similarity=0.140 Sum_probs=73.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCCCcCCCCchhHhhh-ccCCcE-EEEcCCCCHHHHHHHHHhh
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKSGIRGRNDKEETLN-QLQGAS-VCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~~~~~~~~~~~~~~-~~~~v~-~~~~Dl~d~~~l~~~~~~~ 158 (405)
++..||.|+|+ |.+|..++..|+.+| .++++++++++...+....+.... ...... ....|. + .+++
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~----~~~~- 87 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---N----VSAN- 87 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---G----GGTT-
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---h----hhcc-
Confidence 44568999996 999999999999997 479999988765432221111111 111222 223332 2 2344
Q ss_pred CCCccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCE-EEEEc
Q 043385 159 GTSIDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASH-FVLLS 206 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~-~V~~S 206 (405)
.|+||..||... ....+.++.|+.-.+.+++..++.+.+- ++.+|
T Consensus 88 ---adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt 136 (159)
T d2ldxa1 88 ---SKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT 136 (159)
T ss_dssp ---EEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred ---ccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence 999999988643 2445678899999999999888877654 44444
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.62 E-value=4.2e-05 Score=62.72 Aligned_cols=74 Identities=20% Similarity=0.267 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+.+|||+||+|.+|...++.+...|.+|+++++++++. +..... +...+. |..+.. .+.-.+ +++|
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~-------~~~~~l-Ga~~~i-~~~~~~--~~~~~~--~g~D 93 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL-------ALPLAL-GAEEAA-TYAEVP--ERAKAW--GGLD 93 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS-------HHHHHT-TCSEEE-EGGGHH--HHHHHT--TSEE
T ss_pred CCCEEEEEeccccchhhhhhhhccccccccccccccccc-------cccccc-ccceee-ehhhhh--hhhhcc--cccc
Confidence 567999999999999999999999999999999987654 223332 333222 443322 222222 3599
Q ss_pred EEEEccc
Q 043385 164 VVVSCLA 170 (405)
Q Consensus 164 ~Vv~~a~ 170 (405)
+||++.|
T Consensus 94 ~v~d~~G 100 (171)
T d1iz0a2 94 LVLEVRG 100 (171)
T ss_dssp EEEECSC
T ss_pred ccccccc
Confidence 9999876
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.59 E-value=2.1e-05 Score=65.12 Aligned_cols=103 Identities=14% Similarity=0.167 Sum_probs=60.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|.|.|| |.+|..++..|.++||+|.+++|++++..............+..+..........++.+++++ +|+|
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~----aD~i 76 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD----ADVI 76 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTT----CSEE
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcC----CCEE
Confidence 78999999 999999999999999999999998754321000000000011222222222112336677777 9999
Q ss_pred EEcccccCCCCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEc
Q 043385 166 VSCLASRSGGVKDSWKIDYEANRNSLVAGRNC-GASHFVLLS 206 (405)
Q Consensus 166 v~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~S 206 (405)
|.+.... ....+++.++.. .-+.+|.++
T Consensus 77 ii~v~~~-------------~~~~~~~~i~~~l~~~~~iv~~ 105 (184)
T d1bg6a2 77 LIVVPAI-------------HHASIAANIASYISEGQLIILN 105 (184)
T ss_dssp EECSCGG-------------GHHHHHHHHGGGCCTTCEEEES
T ss_pred EEEEchh-------------HHHHHHHHhhhccCCCCEEEEe
Confidence 9864321 345566666654 223455443
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.58 E-value=0.00015 Score=57.42 Aligned_cols=105 Identities=15% Similarity=0.268 Sum_probs=62.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC----CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG----FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
|||.|.||||++|+.+++.|+++. .++..++.+..... .....+-.....+..|.+ .+++
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk--------~~~~~~~~~~~~~~~~~~----~~~~---- 64 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVP--------APNFGKDAGMLHDAFDIE----SLKQ---- 64 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSB--------CCCSSSCCCBCEETTCHH----HHTT----
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccc--------ccccCCcceeeecccchh----hhcc----
Confidence 689999999999999999888753 35665554432211 000111111111223333 2455
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC-EEEEEccccccCCChhHHH
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS-HFVLLSAICVQKPLLEFQR 219 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~-~~V~~Ss~~~~~~~~~y~~ 219 (405)
+|+||.+++. .-+..+.+.+.+.|.+ .+|=.|+..=..+..+|+.
T Consensus 65 ~DvvF~alp~-------------~~s~~~~~~l~~~g~~~~VIDlSsdfR~~~dvpl~l 110 (147)
T d1mb4a1 65 LDAVITCQGG-------------SYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITL 110 (147)
T ss_dssp CSEEEECSCH-------------HHHHHHHHHHHHTTCCSEEEESSSTTTTCTTEEEEC
T ss_pred ccEEEEecCc-------------hHHHHHhHHHHHcCCceEEEeCCccccccCCceEEe
Confidence 9999987652 2255677777888875 4666676665555555543
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.57 E-value=4.3e-05 Score=60.57 Aligned_cols=108 Identities=13% Similarity=0.198 Sum_probs=69.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhc--cCCcEEE-EcCCCCHHHHHHHHHhhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQ--LQGASVC-FSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~-~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+||.|+|+ |.+|..++-.|+.++ .++++++.+++...+....+..... .....+. ..|..+ +++
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~-------~~~---- 69 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD-------TAN---- 69 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG-------GTT----
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH-------hcC----
Confidence 68999997 999999999998887 5899999887654322111111100 1122333 233222 334
Q ss_pred ccEEEEcccccC---CCCcchhHhHHHHHHHHHHHHHhcCCCEEEEE
Q 043385 162 IDVVVSCLASRS---GGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205 (405)
Q Consensus 162 ~d~Vv~~a~~~~---~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~ 205 (405)
.|+||-+||... ....+..+.|..-.+.+++...+.+.+-++.+
T Consensus 70 advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv 116 (142)
T d1uxja1 70 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIM 116 (142)
T ss_dssp CSEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred CCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence 899999998653 23445778899999999999998876555444
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.51 E-value=0.00033 Score=52.64 Aligned_cols=71 Identities=21% Similarity=0.288 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
...||.|.|| |.+|+.++.+..+.|++|++++.+++... ... .-+.+.+|+.|.+.+.+.... .++|
T Consensus 10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA---------~~v-a~~~i~~~~~d~~~l~~~~~~--~~~D 76 (111)
T d1kjqa2 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPA---------MHV-AHRSHVINMLDGDALRRVVEL--EKPH 76 (111)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGG---------GGG-SSEEEECCTTCHHHHHHHHHH--HCCS
T ss_pred CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCch---------hhc-CCeEEECCCCCHHHHHHHHHh--hCCc
Confidence 3468999997 99999999999999999999998876432 111 236788999999999988764 1379
Q ss_pred EEEE
Q 043385 164 VVVS 167 (405)
Q Consensus 164 ~Vv~ 167 (405)
+|-.
T Consensus 77 viT~ 80 (111)
T d1kjqa2 77 YIVP 80 (111)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9864
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.51 E-value=0.00039 Score=56.46 Aligned_cols=104 Identities=18% Similarity=0.237 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCC--CCHHHHHHHHHhh-CC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV--TNLESLEKSLENL-GT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~~~l~~~~~~~-~~ 160 (405)
.+.+|+|+| +|.+|...++.+...|.+|+++++++++. +.......-..+..|- .+...+.+.+... ..
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~-------~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~ 97 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRL-------EVAKNCGADVTLVVDPAKEEESSIIERIRSAIGD 97 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH-------HHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHH-------HHHHHcCCcEEEeccccccccchhhhhhhccccc
Confidence 457899997 59999999999999999999999988764 2233332222333333 2444454444432 14
Q ss_pred CccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccc
Q 043385 161 SIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAIC 209 (405)
Q Consensus 161 ~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~ 209 (405)
.+|+||.++|.. ......++.++.. ++++.++...
T Consensus 98 g~D~vid~~g~~------------~~~~~a~~~~~~~--G~iv~~G~~~ 132 (170)
T d1e3ja2 98 LPNVTIDCSGNE------------KCITIGINITRTG--GTLMLVGMGS 132 (170)
T ss_dssp CCSEEEECSCCH------------HHHHHHHHHSCTT--CEEEECSCCS
T ss_pred CCceeeecCCCh------------HHHHHHHHHHhcC--CceEEEecCC
Confidence 699999998742 1233344555544 4888887543
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.50 E-value=0.00025 Score=60.40 Aligned_cols=80 Identities=18% Similarity=0.219 Sum_probs=56.0
Q ss_pred CCCCCCeEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcC
Q 043385 81 KNPKDINILVVGS----------------TGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSD 144 (405)
Q Consensus 81 ~~~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~D 144 (405)
.++++++||||+| ||..|.+|++++..+|++|+++.-..... ..+++..+.
T Consensus 2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~-----------~p~~~~~~~-- 68 (223)
T d1u7za_ 2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-----------TPPFVKRVD-- 68 (223)
T ss_dssp CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-----------CCTTEEEEE--
T ss_pred cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC-----------cccccccce--
Confidence 3577889999964 89999999999999999999998755421 113555554
Q ss_pred CCCHHHHHHHHHhhCCCccEEEEcccccC
Q 043385 145 VTNLESLEKSLENLGTSIDVVVSCLASRS 173 (405)
Q Consensus 145 l~d~~~l~~~~~~~~~~~d~Vv~~a~~~~ 173 (405)
+...+++...+.......|++|++|+...
T Consensus 69 ~~t~~~m~~~~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 69 VMTALEMEAAVNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp CCSHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred ehhhHHHHHHHHhhhccceeEeeeechhh
Confidence 44455554444322234999999998754
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.44 E-value=7.5e-05 Score=60.32 Aligned_cols=74 Identities=35% Similarity=0.490 Sum_probs=55.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
++++++|||.|+ |.+|+.+++.|...|. +|++..|+.++.. ...... +..+ .+.+++.+.+..
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~------~l~~~~-~~~~-----~~~~~~~~~l~~--- 84 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAV------ELARDL-GGEA-----VRFDELVDHLAR--- 84 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHH------HHHHHH-TCEE-----CCGGGHHHHHHT---
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHH------HHHHhh-hccc-----ccchhHHHHhcc---
Confidence 467899999998 9999999999999997 6999999876542 112222 3333 234567788887
Q ss_pred CccEEEEccccc
Q 043385 161 SIDVVVSCLASR 172 (405)
Q Consensus 161 ~~d~Vv~~a~~~ 172 (405)
+|+||.+.+..
T Consensus 85 -~Divi~atss~ 95 (159)
T d1gpja2 85 -SDVVVSATAAP 95 (159)
T ss_dssp -CSEEEECCSSS
T ss_pred -CCEEEEecCCC
Confidence 99999987754
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.42 E-value=0.00027 Score=58.18 Aligned_cols=101 Identities=20% Similarity=0.241 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCc-EEEEcCCCCHHHHHHHHHhhC--
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGA-SVCFSDVTNLESLEKSLENLG-- 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~l~~~~~~~~-- 159 (405)
.+.+|||+|+ |.+|...++.+...|+ +|+++++++++. +..... +. .++.-.=.+.....+.+....
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~-------~~a~~l-Ga~~vi~~~~~~~~~~~~~i~~~~~~ 98 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL-------KLAEEI-GADLTLNRRETSVEERRKAIMDITHG 98 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHH-------HHHHHT-TCSEEEETTTSCHHHHHHHHHHHTTT
T ss_pred CCCEEEEECC-Cccchhheecccccccccccccccccccc-------cccccc-cceEEEeccccchHHHHHHHHHhhCC
Confidence 4679999997 9999999999999997 799999988754 223333 22 333222223333333332221
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
.++|+||.+.|... .....++.++.. +++|.++-
T Consensus 99 ~g~Dvvid~vG~~~------------~~~~a~~~l~~~--G~iv~~G~ 132 (182)
T d1vj0a2 99 RGADFILEATGDSR------------ALLEGSELLRRG--GFYSVAGV 132 (182)
T ss_dssp SCEEEEEECSSCTT------------HHHHHHHHEEEE--EEEEECCC
T ss_pred CCceEEeecCCchh------------HHHHHHHHhcCC--CEEEEEee
Confidence 35999999987532 123344444443 47887764
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.42 E-value=0.00047 Score=54.93 Aligned_cols=77 Identities=18% Similarity=0.129 Sum_probs=58.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
-+|+|.|. |-+|..+++.|.++|++|++++.++++.. ....... ..++.++.||.+|++.|+++--+ ++|+|
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~---~~~~~~~-~~~~~vi~Gd~~d~~~L~~a~i~---~a~~v 75 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDI---KQLEQRL-GDNADVIPGDSNDSSVLKKAGID---RCRAI 75 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHH---HHHHHHH-CTTCEEEESCTTSHHHHHHHTTT---TCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHH---HHHHHhh-cCCcEEEEccCcchHHHHHhccc---cCCEE
Confidence 36899998 89999999999999999999998775321 0001111 24899999999999988775332 49999
Q ss_pred EEccc
Q 043385 166 VSCLA 170 (405)
Q Consensus 166 v~~a~ 170 (405)
|-+..
T Consensus 76 i~~~~ 80 (153)
T d1id1a_ 76 LALSD 80 (153)
T ss_dssp EECSS
T ss_pred EEccc
Confidence 97643
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.42 E-value=0.00012 Score=60.39 Aligned_cols=103 Identities=22% Similarity=0.247 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+.+|||+||+|.+|...++.+...|.+|+++++++++. +.+... +...+ .|..+++-.++..+... .++
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-------~~l~~~-Ga~~v-i~~~~~~~~~~v~~~t~~~g~ 95 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-------EMLSRL-GVEYV-GDSRSVDFADEILELTDGYGV 95 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-------HHHHTT-CCSEE-EETTCSTHHHHHHHHTTTCCE
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeecccccc-------cccccc-ccccc-ccCCccCHHHHHHHHhCCCCE
Confidence 357999999999999999999988899999999876543 333333 33333 35555543333332111 469
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
|+||++.|.. .....++.++.. +++|.++....
T Consensus 96 d~v~d~~g~~-------------~~~~~~~~l~~~--G~~v~~G~~~~ 128 (183)
T d1pqwa_ 96 DVVLNSLAGE-------------AIQRGVQILAPG--GRFIELGKKDV 128 (183)
T ss_dssp EEEEECCCTH-------------HHHHHHHTEEEE--EEEEECSCGGG
T ss_pred EEEEecccch-------------HHHHHHHHhcCC--CEEEEEccCCC
Confidence 9999988731 122344444443 48888765544
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.41 E-value=9.1e-05 Score=60.93 Aligned_cols=79 Identities=16% Similarity=0.181 Sum_probs=54.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~~ 162 (405)
.+.+|||+||+|.+|..+++.+...|.+|+++++++++. +..... +...+ .|.++++..+++.+-.. ..+
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~-------~~~~~l-Ga~~v-i~~~~~d~~~~v~~~t~g~g~ 98 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-------QSALKA-GAWQV-INYREEDLVERLKEITGGKKV 98 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-------HHHHHH-TCSEE-EETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHH-------HHHHhc-CCeEE-EECCCCCHHHHHHHHhCCCCe
Confidence 367999999999999999999888999999999998764 233333 33322 36666443333222111 468
Q ss_pred cEEEEcccc
Q 043385 163 DVVVSCLAS 171 (405)
Q Consensus 163 d~Vv~~a~~ 171 (405)
|+|+++.+.
T Consensus 99 d~v~d~~g~ 107 (179)
T d1qora2 99 RVVYDSVGR 107 (179)
T ss_dssp EEEEECSCG
T ss_pred EEEEeCccH
Confidence 999998764
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=0.00058 Score=55.50 Aligned_cols=105 Identities=16% Similarity=0.245 Sum_probs=67.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh-CCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL-GTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~~ 161 (405)
.+.+|+|.|+ |.+|...+..+...|. +|+++++++.+. +......--.++..+-.+.....+.++.- ..+
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl-------~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g 97 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRL-------SKAKEIGADLVLQISKESPQEIARKVEGQLGCK 97 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-------HHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHH-------HHHHHhCCcccccccccccccccccccccCCCC
Confidence 3568999987 9999999999999997 799999987764 22333322234444445555555544321 146
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+|+||.+.|.. ......++.++.. +++++++....
T Consensus 98 ~Dvvid~~G~~------------~~~~~a~~~~~~g--G~iv~~G~~~~ 132 (171)
T d1pl8a2 98 PEVTIECTGAE------------ASIQAGIYATRSG--GTLVLVGLGSE 132 (171)
T ss_dssp CSEEEECSCCH------------HHHHHHHHHSCTT--CEEEECSCCCS
T ss_pred ceEEEeccCCc------------hhHHHHHHHhcCC--CEEEEEecCCC
Confidence 99999998742 1223344444433 48888875443
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.31 E-value=0.00049 Score=56.17 Aligned_cols=113 Identities=15% Similarity=0.067 Sum_probs=68.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC---C----eEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG---F----NVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSL 155 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g---~----~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~ 155 (405)
..+|.||||+|.||.+++-.|+... . .++.++....... .....-.+.. .+....+.. .....+++
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~-l~g~~mdl~d~a~~~~~~~~~----~~~~~~~~ 98 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQA-LEGVAMELEDSLYPLLREVSI----GIDPYEVF 98 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHH-HHHHHHHHHTTTCTTEEEEEE----ESCHHHHT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccch-hcchhhhhcccccccccCccc----cccchhhc
Confidence 3589999999999999999998752 1 4555555443210 0000001111 112222111 11245667
Q ss_pred HhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCC-C-EEEEEc
Q 043385 156 ENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGA-S-HFVLLS 206 (405)
Q Consensus 156 ~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v-~-~~V~~S 206 (405)
++ .|+||-.+|.... ...+.++.|..-.+.+.+++.+..- . +++.+|
T Consensus 99 ~~----aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 99 ED----VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp TT----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cC----CceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 77 9999999987532 4456788999999999999988532 2 455454
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.30 E-value=4.5e-05 Score=61.88 Aligned_cols=36 Identities=25% Similarity=0.431 Sum_probs=33.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
|||+|.|+ |.+|+.++..|.+.|++|++++|++...
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~ 36 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY 36 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence 79999999 9999999999999999999999988754
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.30 E-value=0.0001 Score=59.11 Aligned_cols=113 Identities=9% Similarity=0.071 Sum_probs=66.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC----e---EEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHH
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF----N---VIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSL 155 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~----~---V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~ 155 (405)
++||.|+||+|++|++++..|+..+. + ..++.-...... .......+.. .+....+... ....+.+
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 78 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKA-LEGVVMELEDCAFPLLAGLEAT----DDPKVAF 78 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHH-HHHHHHHHHTTTCTTEEEEEEE----SCHHHHT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhh-HcCchhhhhccccccccccccC----Cchhhhc
Confidence 47999999999999999999988752 1 222222111100 0000001111 1223333322 2234667
Q ss_pred HhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhcCC-C-EEEEEc
Q 043385 156 ENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNCGA-S-HFVLLS 206 (405)
Q Consensus 156 ~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~~v-~-~~V~~S 206 (405)
++ +|+||-++|.... +..+.++.|+.-.+.+.+.+.+... . .++.+|
T Consensus 79 ~~----advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 79 KD----ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp TT----CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cc----ccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 77 9999999997542 3345778899999999999888532 2 444444
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.30 E-value=9.8e-05 Score=51.51 Aligned_cols=39 Identities=31% Similarity=0.486 Sum_probs=35.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
++++|||+||+|.+|...++.+...|++|+++++++++.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~ 69 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH 69 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence 457899999999999999998888999999999988653
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.29 E-value=0.00016 Score=57.21 Aligned_cols=96 Identities=23% Similarity=0.298 Sum_probs=55.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC---CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG---FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+|+|.|.||||++|+.+++.|.+++ .++..+..+..... ..... .-+...-++.+ ..+++
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk-------~i~~~-~~~~~~~~~~~-----~~~~~---- 64 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ-------RMGFA-ESSLRVGDVDS-----FDFSS---- 64 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC-------EEEET-TEEEECEEGGG-----CCGGG----
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCc-------ceeec-cccchhccchh-----hhhcc----
Confidence 4799999999999999999998665 36776654433211 11110 11111112211 11344
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
+|++|.+++. .....+...+.+.|. ++|=.|+..-+
T Consensus 65 ~d~vf~a~p~-------------~~s~~~~~~~~~~g~-~VID~Ss~fR~ 100 (144)
T d2hjsa1 65 VGLAFFAAAA-------------EVSRAHAERARAAGC-SVIDLSGALEP 100 (144)
T ss_dssp CSEEEECSCH-------------HHHHHHHHHHHHTTC-EEEETTCTTTT
T ss_pred ceEEEecCCc-------------chhhhhccccccCCc-eEEeechhhcc
Confidence 8999987642 224455566666675 67766766443
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.23 E-value=0.00037 Score=56.32 Aligned_cols=35 Identities=37% Similarity=0.601 Sum_probs=32.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
|||.|.|. |.+|+.+++.|.++|++|++++|+++.
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~ 35 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQST 35 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchH
Confidence 68999987 999999999999999999999998754
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.22 E-value=0.0004 Score=57.02 Aligned_cols=33 Identities=27% Similarity=0.489 Sum_probs=27.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEec
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR-GFNVIAIAR 117 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r 117 (405)
|++|.|.||||++|+.+++.|.++ ..+|..+.-
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~ 34 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTV 34 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEe
Confidence 579999999999999999999998 467766543
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.15 E-value=3.8e-05 Score=62.69 Aligned_cols=101 Identities=22% Similarity=0.273 Sum_probs=61.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh-CCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL-GTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~~~d 163 (405)
+..|||+||+|.+|...++.....|++|+++++++++. +.+..+ +...+. |.. +...+..+.. .+++|
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~-------~~~~~l-Gad~vi-~~~--~~~~~~~~~~~~~gvd 92 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA-------DYLKQL-GASEVI-SRE--DVYDGTLKALSKQQWQ 92 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH-------HHHHHH-TCSEEE-EHH--HHCSSCCCSSCCCCEE
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHH-------HHHHhh-cccceE-ecc--chhchhhhcccCCCce
Confidence 45799999999999999998888899999999998775 333333 232221 211 1111111100 14699
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
+||++.|... ....++.++.. +++|.++..+..
T Consensus 93 ~vid~vgg~~-------------~~~~~~~l~~~--G~iv~~G~~~g~ 125 (167)
T d1tt7a2 93 GAVDPVGGKQ-------------LASLLSKIQYG--GSVAVSGLTGGG 125 (167)
T ss_dssp EEEESCCTHH-------------HHHHHTTEEEE--EEEEECCCSSCS
T ss_pred EEEecCcHHH-------------HHHHHHHhccC--ceEEEeeccCCC
Confidence 9999877421 12233333332 478887766654
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.13 E-value=0.0016 Score=50.20 Aligned_cols=115 Identities=17% Similarity=0.253 Sum_probs=73.0
Q ss_pred CCCCeEEEEcCC---ChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 83 PKDINILVVGST---GYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 83 ~~~~~vlVtGat---G~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
+..++|.|.||| +..|..+.+.|.+.| ++|+.+..+.+.. .++..+ -++.|..
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i-------------~G~~~y-~sl~dlp--------- 62 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV-------------QGVKAY-KSVKDIP--------- 62 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE-------------TTEECB-SSTTSCS---------
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc-------------CCeEee-cchhhcC---------
Confidence 356899999999 999999999988766 6888886543321 133322 2454432
Q ss_pred CCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccccCCChhHHHHHHHHHHHHHHHhhhcCCc
Q 043385 159 GTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQKPLLEFQRAKLKFEAEMMKVAEEDSGF 238 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~~~~~~y~~sK~~~E~~~~~~~~~~~gi 238 (405)
+.+|.++-+.. -..+..+++.|.+.|++.+|.+|+...... ......|+.+.+.+. +.|+
T Consensus 63 -~~vDlvvi~vp-------------~~~~~~~~~~~~~~g~~~~vi~s~Gf~e~~-----~~~~~~~~~l~~~a~-~~gi 122 (129)
T d2csua1 63 -DEIDLAIIVVP-------------KRFVKDTLIQCGEKGVKGVVIITAGFGETG-----EEGKREEKELVEIAH-KYGM 122 (129)
T ss_dssp -SCCSEEEECSC-------------HHHHHHHHHHHHHHTCCEEEECCCSSTTSC-----HHHHHHHHHHHHHHH-HHTC
T ss_pred -CCCceEEEecC-------------hHHhHHHHHHHHHcCCCEEEEecccccccc-----hhhHHHHHHHHHHHH-HcCC
Confidence 24899997543 345667889999999998888876543321 222333344444444 3677
Q ss_pred eE
Q 043385 239 TY 240 (405)
Q Consensus 239 ~~ 240 (405)
++
T Consensus 123 rv 124 (129)
T d2csua1 123 RI 124 (129)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.12 E-value=0.00093 Score=53.30 Aligned_cols=113 Identities=15% Similarity=0.099 Sum_probs=67.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-----C--eEEEEecCCCCcCCCCchhH-hhh--ccCCcEEEEcCCCCHHHHHH
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-----F--NVIAIAREKSGIRGRNDKEE-TLN--QLQGASVCFSDVTNLESLEK 153 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-----~--~V~~l~r~~~~~~~~~~~~~-~~~--~~~~v~~~~~Dl~d~~~l~~ 153 (405)
+++||.|+||+|.+|++++-.|+..+ . +++.++.++.... ...+. .+. ..+....+..- ....+
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~----~~~~~ 75 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGV--LDGVLMELQDCALPLLKDVIAT----DKEEI 75 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHH--HHHHHHHHHHTCCTTEEEEEEE----SCHHH
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhh--hhhhhhhhcccccccccccccC----ccccc
Confidence 35799999999999999999998653 1 3455554432211 00000 011 11222222221 11345
Q ss_pred HHHhhCCCccEEEEcccccCC---CCcchhHhHHHHHHHHHHHHHhc-CCC-EEEEEc
Q 043385 154 SLENLGTSIDVVVSCLASRSG---GVKDSWKIDYEANRNSLVAGRNC-GAS-HFVLLS 206 (405)
Q Consensus 154 ~~~~~~~~~d~Vv~~a~~~~~---~~~~~~~~n~~g~~~ll~aa~~~-~v~-~~V~~S 206 (405)
++++ .|+||-++|.... ...+.++.|..-.+.+.+...+. +-. .+|.+|
T Consensus 76 ~~~~----~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs 129 (154)
T d5mdha1 76 AFKD----LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (154)
T ss_dssp HTTT----CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ccCC----ceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence 6666 9999999986542 45567889999999999888764 433 344444
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.11 E-value=0.00076 Score=56.43 Aligned_cols=35 Identities=29% Similarity=0.554 Sum_probs=31.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
|+|.|.|. |++|..++..|+++|++|++++.+++.
T Consensus 1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~ 35 (202)
T d1mv8a2 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTK 35 (202)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHH
Confidence 68999976 999999999999999999999987654
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.02 E-value=0.00029 Score=57.26 Aligned_cols=76 Identities=20% Similarity=0.226 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+.+|+|+|+ |.+|...++.+...|.+|+++++++++. +....+ +...+. |..+...+.+... +.+|
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~-------~~a~~l-Ga~~~i-~~~~~~~~~~~~~---~~~d 93 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR-------EDAMKM-GADHYI-ATLEEGDWGEKYF---DTFD 93 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH-------HHHHHH-TCSEEE-EGGGTSCHHHHSC---SCEE
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHH-------HHhhcc-CCcEEe-eccchHHHHHhhh---cccc
Confidence 4679999987 9999999988888899999999998765 223333 332222 2222222333222 2499
Q ss_pred EEEEccccc
Q 043385 164 VVVSCLASR 172 (405)
Q Consensus 164 ~Vv~~a~~~ 172 (405)
+|+.+.+..
T Consensus 94 ~vi~~~~~~ 102 (168)
T d1piwa2 94 LIVVCASSL 102 (168)
T ss_dssp EEEECCSCS
T ss_pred eEEEEecCC
Confidence 999987754
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.00 E-value=0.0019 Score=51.69 Aligned_cols=65 Identities=22% Similarity=0.430 Sum_probs=48.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|+|.|.|- |.+|+.+++.|+++||+|++.+|++++. +.+... +... .++..+++++ +|+|
T Consensus 1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~-------~~~~~~-~~~~-------~~~~~e~~~~----~d~i 60 (161)
T d1vpda2 1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAI-------ADVIAA-GAET-------ASTAKAIAEQ----CDVI 60 (161)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH-------HHHHHT-TCEE-------CSSHHHHHHH----CSEE
T ss_pred CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchh-------HHHHHh-hhhh-------cccHHHHHhC----CCeE
Confidence 67999987 9999999999999999999999987654 223322 2222 1234566777 8999
Q ss_pred EEccc
Q 043385 166 VSCLA 170 (405)
Q Consensus 166 v~~a~ 170 (405)
|-|..
T Consensus 61 i~~v~ 65 (161)
T d1vpda2 61 ITMLP 65 (161)
T ss_dssp EECCS
T ss_pred EEEcC
Confidence 98764
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.97 E-value=0.0032 Score=50.43 Aligned_cols=66 Identities=26% Similarity=0.361 Sum_probs=46.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
|++|.|.|- |.+|+.+++.|+++||+|.+.+|++++. +.+... +.. . .....++++. .|+
T Consensus 1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~-------~~~~~~-~~~--~-----~~~~~e~~~~----~di 60 (162)
T d3cuma2 1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAV-------DGLVAA-GAS--A-----ARSARDAVQG----ADV 60 (162)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHH-------HHHHHT-TCE--E-----CSSHHHHHTS----CSE
T ss_pred CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhh-------hhhhhh-hcc--c-----cchhhhhccc----cCe
Confidence 468999976 9999999999999999999999987653 222222 111 1 1224556665 898
Q ss_pred EEEccc
Q 043385 165 VVSCLA 170 (405)
Q Consensus 165 Vv~~a~ 170 (405)
|+-+..
T Consensus 61 ii~~v~ 66 (162)
T d3cuma2 61 VISMLP 66 (162)
T ss_dssp EEECCS
T ss_pred eeeccc
Confidence 887764
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.94 E-value=0.00064 Score=55.04 Aligned_cols=75 Identities=21% Similarity=0.341 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+.+|+|.|+ |.+|...++.+...|++++++++++++. +....+ +...+ .|..+.+......++ +|
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~-------~~a~~l-Gad~~-i~~~~~~~~~~~~~~----~D 95 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-------EAAKAL-GADEV-VNSRNADEMAAHLKS----FD 95 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-------HHHHHH-TCSEE-EETTCHHHHHTTTTC----EE
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH-------HHHhcc-CCcEE-EECchhhHHHHhcCC----Cc
Confidence 4679999987 9999999999988999999999887653 222222 33222 366666655544444 99
Q ss_pred EEEEccccc
Q 043385 164 VVVSCLASR 172 (405)
Q Consensus 164 ~Vv~~a~~~ 172 (405)
++|.+.|..
T Consensus 96 ~vid~~g~~ 104 (168)
T d1uufa2 96 FILNTVAAP 104 (168)
T ss_dssp EEEECCSSC
T ss_pred eeeeeeecc
Confidence 999998753
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.87 E-value=0.0001 Score=60.56 Aligned_cols=100 Identities=21% Similarity=0.243 Sum_probs=62.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
+.+|||+||+|.+|...++.....|++|+++++++++. +.+... +...+. |..+.+. .+.+.. ...|.
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~-------~~~~~l-Gad~vi-~~~~~~~-~~~l~~--~~~~~ 99 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH-------EYLKSL-GASRVL-PRDEFAE-SRPLEK--QVWAG 99 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-------HHHHHH-TEEEEE-EGGGSSS-CCSSCC--CCEEE
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH-------HHHHhh-cccccc-ccccHHH-HHHHHh--hcCCe
Confidence 35899999999999999999999999999999988764 223332 333332 3322221 112222 24789
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
||++.+.. .....++.++.. +|+|.++....+
T Consensus 100 vvD~Vgg~-------------~~~~~l~~l~~~--Griv~~G~~~~~ 131 (177)
T d1o89a2 100 AIDTVGDK-------------VLAKVLAQMNYG--GCVAACGLAGGF 131 (177)
T ss_dssp EEESSCHH-------------HHHHHHHTEEEE--EEEEECCCTTCS
T ss_pred eEEEcchH-------------HHHHHHHHhccc--cceEeecccCCc
Confidence 99887631 122333333333 489988877655
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=96.86 E-value=0.0011 Score=47.33 Aligned_cols=84 Identities=24% Similarity=0.277 Sum_probs=57.0
Q ss_pred CeEEEEcCCChhH-HHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 86 INILVVGSTGYIG-KFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG-~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
|+|-++|- |++| +.||+.|.++|+.|.+-|+.+.... +.+... ++++..+. +++.+ ++ +|.
T Consensus 2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t------~~L~~~-Gi~i~~gh--~~~~i----~~----~d~ 63 (89)
T d1j6ua1 2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERT------AYLRKL-GIPIFVPH--SADNW----YD----PDL 63 (89)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHH------HHHHHT-TCCEESSC--CTTSC----CC----CSE
T ss_pred cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhH------HHHHHC-CCeEEeee--ccccc----CC----CCE
Confidence 78888887 6677 5899999999999999998864332 344443 67765542 22222 34 899
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS 200 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~ 200 (405)
||...+..... . -+.+|++.|++
T Consensus 64 vV~SsAI~~~n--------p-----el~~A~~~gIp 86 (89)
T d1j6ua1 64 VIKTPAVRDDN--------P-----EIVRARMERVP 86 (89)
T ss_dssp EEECTTCCTTC--------H-----HHHHHHHTTCC
T ss_pred EEEecCcCCCC--------H-----HHHHHHHcCCC
Confidence 99887765422 2 36677887774
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.86 E-value=0.00049 Score=56.23 Aligned_cols=99 Identities=12% Similarity=0.152 Sum_probs=61.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHH---HHHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLE---SLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~l~~~~~~~~ 159 (405)
.+.+|+|.|+ |.+|...++.+...|+ +|+++++++++. +....+.-..++ |..+.+ .+.+...+
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~-------~~a~~lGa~~~i--~~~~~~~~~~v~~~t~g-- 94 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICV-------EAAKFYGATDIL--NYKNGHIEDQVMKLTNG-- 94 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHH-------HHHHHHTCSEEE--CGGGSCHHHHHHHHTTT--
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhH-------HHHHhhCccccc--cccchhHHHHHHHHhhc--
Confidence 4678999987 9999999999888896 799999887654 222333112222 444332 23333332
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
..+|+||.++|... .....++.++.. ++++.++-.
T Consensus 95 ~G~D~vid~~g~~~------------~~~~a~~~~~~~--G~iv~~G~~ 129 (174)
T d1jqba2 95 KGVDRVIMAGGGSE------------TLSQAVKMVKPG--GIISNINYH 129 (174)
T ss_dssp SCEEEEEECSSCTT------------HHHHHHHHEEEE--EEEEECCCC
T ss_pred cCcceEEEccCCHH------------HHHHHHHHHhcC--CEEEEEeec
Confidence 35999999988532 122334444443 378777643
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.83 E-value=0.0036 Score=50.81 Aligned_cols=72 Identities=17% Similarity=0.281 Sum_probs=48.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc-CCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL-QGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
.+|-|.|- |.+|..+++.|+++||+|++.+|++++.. .+... ....... -....+.+.+.+.. .|.
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~-------~l~~~~~~~~~~~-~a~~~~~~~~~~~~----~~~ 69 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVD-------DFLANEAKGTKVL-GAHSLEEMVSKLKK----PRR 69 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHH-------HHHHTTTTTSSCE-ECSSHHHHHHHBCS----SCE
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHH-------HHHHhcccccccc-chhhhhhhhhhhcc----cce
Confidence 57899998 99999999999999999999999987652 22111 0000011 12345556666665 788
Q ss_pred EEEccc
Q 043385 165 VVSCLA 170 (405)
Q Consensus 165 Vv~~a~ 170 (405)
++-+..
T Consensus 70 ii~~~~ 75 (176)
T d2pgda2 70 IILLVK 75 (176)
T ss_dssp EEECSC
T ss_pred EEEecC
Confidence 887653
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.82 E-value=0.0011 Score=53.56 Aligned_cols=78 Identities=21% Similarity=0.296 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCc-EEEEcCCCCHHHHHHHHHhhC-C
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGA-SVCFSDVTNLESLEKSLENLG-T 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~l~~~~~~~~-~ 160 (405)
.+.+|+|+|++|.+|...+..+...| ..|+++++++++. +..... +. .++ |.++.+.+++..+... +
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~-------~~~~~~-Ga~~~i--~~~~~~~~~~~~~~~~~~ 96 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-------EAAKRA-GADYVI--NASMQDPLAEIRRITESK 96 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-------HHHHHH-TCSEEE--ETTTSCHHHHHHHHTTTS
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhH-------HHHHHc-CCceee--ccCCcCHHHHHHHHhhcc
Confidence 45789999999999999999998888 5899999887653 223333 33 333 3444433444333221 4
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
.+|+||.++|.
T Consensus 97 ~~d~vid~~g~ 107 (170)
T d1jvba2 97 GVDAVIDLNNS 107 (170)
T ss_dssp CEEEEEESCCC
T ss_pred cchhhhccccc
Confidence 59999999874
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=96.81 E-value=0.0018 Score=49.81 Aligned_cols=70 Identities=21% Similarity=0.263 Sum_probs=53.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|.|+|.|. |-+|+.+++.|. |++|.+++.+++.. +.+.. .++.++.||.+|++.|+++-- .+++.+
T Consensus 1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~-------~~~~~-~~~~~i~Gd~~~~~~L~~a~i---~~A~~v 66 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVR-------KKVLR-SGANFVHGDPTRVSDLEKANV---RGARAV 66 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHH-------HHHHH-TTCEEEESCTTSHHHHHHTTC---TTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHH-------HHHHh-cCccccccccCCHHHHHHhhh---hcCcEE
Confidence 46888887 899999999984 56788888877643 22332 489999999999998887532 248999
Q ss_pred EEcc
Q 043385 166 VSCL 169 (405)
Q Consensus 166 v~~a 169 (405)
|-+.
T Consensus 67 i~~~ 70 (129)
T d2fy8a1 67 IVNL 70 (129)
T ss_dssp EECC
T ss_pred EEec
Confidence 9654
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=96.73 E-value=0.00058 Score=56.50 Aligned_cols=108 Identities=13% Similarity=0.276 Sum_probs=62.6
Q ss_pred CCeEEE-EcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEc---CCCCH-HHHHHHHHhhC
Q 043385 85 DINILV-VGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS---DVTNL-ESLEKSLENLG 159 (405)
Q Consensus 85 ~~~vlV-tGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~---Dl~d~-~~l~~~~~~~~ 159 (405)
+.+|+| +||+|.+|...++.....|.+|++++|+.++.+.. .+.+..+.--.++.- |..+. +.+.+..+...
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~---~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g 105 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEV---VASLKELGATQVITEDQNNSREFGPTIKEWIKQSG 105 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHH---HHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchH---HhhhhhccccEEEeccccchhHHHHHHHHHHhhcc
Confidence 456666 69999999999998888899999999887653211 112222222233332 22221 12333333222
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
+++|+|+++.|.. .....++.++.. +++|.++.+..
T Consensus 106 ~~vdvv~D~vg~~-------------~~~~~~~~l~~~--G~~v~~G~~~~ 141 (189)
T d1gu7a2 106 GEAKLALNCVGGK-------------SSTGIARKLNNN--GLMLTYGGMSF 141 (189)
T ss_dssp CCEEEEEESSCHH-------------HHHHHHHTSCTT--CEEEECCCCSS
T ss_pred CCceEEEECCCcc-------------hhhhhhhhhcCC--cEEEEECCccC
Confidence 4699999987632 122344444433 48988776544
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.70 E-value=0.00074 Score=55.42 Aligned_cols=75 Identities=24% Similarity=0.275 Sum_probs=49.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhcc---C--CcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQL---Q--GASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~---~--~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
|+|.|.|| |-.|.+++..|.+.|++|++..|..+... .+..... + +......++.-.+++.+++++
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~-----~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--- 71 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEI-----LKSISAGREHPRLGVKLNGVEIFWPEQLEKCLEN--- 71 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHH-----HHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTT---
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHH-----HHHHhhhhhhhhhcchhccccccccccHHHHHhc---
Confidence 78999999 99999999999999999999998543210 0111110 1 111111122234668888887
Q ss_pred CccEEEEccc
Q 043385 161 SIDVVVSCLA 170 (405)
Q Consensus 161 ~~d~Vv~~a~ 170 (405)
+|+||.+..
T Consensus 72 -ad~Ii~avp 80 (180)
T d1txga2 72 -AEVVLLGVS 80 (180)
T ss_dssp -CSEEEECSC
T ss_pred -cchhhcccc
Confidence 999997543
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=96.64 E-value=0.0001 Score=61.33 Aligned_cols=81 Identities=21% Similarity=0.270 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
.+++|.|.|| |-.|.+++..|.+.|++|++.+|+++.............-++++.+ .-++.-..++.+++++ .|
T Consensus 6 ~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~----ad 79 (189)
T d1n1ea2 6 YLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNG----AE 79 (189)
T ss_dssp CEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTT----CS
T ss_pred eeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCC----CC
Confidence 4467999999 9999999999999999999999986543210000000000122221 0111112347788887 99
Q ss_pred EEEEccc
Q 043385 164 VVVSCLA 170 (405)
Q Consensus 164 ~Vv~~a~ 170 (405)
+||.+..
T Consensus 80 ~iiiavP 86 (189)
T d1n1ea2 80 IILFVIP 86 (189)
T ss_dssp CEEECSC
T ss_pred EEEEcCc
Confidence 9997543
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.60 E-value=0.0034 Score=50.93 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=28.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-FNVIAIARE 118 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~ 118 (405)
|++|.|.||||++|+.+++.|.++. .+|..+.-+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~ 35 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence 4789999999999999999998875 567666543
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.57 E-value=0.0016 Score=53.57 Aligned_cols=104 Identities=16% Similarity=0.171 Sum_probs=55.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
+.+|||+||+|.+|+..++.....|.+ |++++.++++.. ...... +...+ .|..+++..+..-+....++|
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~------~l~~~~-gad~v-i~~~~~~~~~~~~~~~~~GvD 102 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCL------FLTSEL-GFDAA-VNYKTGNVAEQLREACPGGVD 102 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHH------HHHHHS-CCSEE-EETTSSCHHHHHHHHCTTCEE
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHh------hhhhcc-cceEE-eeccchhHHHHHHHHhccCce
Confidence 368999999999999999988888975 444555543321 112222 22222 255543322222221114699
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
+||++.|.. .....++..+.. +|+|.++.++.|
T Consensus 103 vv~D~vGg~-------------~~~~~~~~l~~~--G~iv~~G~~s~~ 135 (187)
T d1vj1a2 103 VYFDNVGGD-------------ISNTVISQMNEN--SHIILCGQISQY 135 (187)
T ss_dssp EEEESSCHH-------------HHHHHHTTEEEE--EEEEEC------
T ss_pred EEEecCCch-------------hHHHHhhhcccc--ccEEEecccccc
Confidence 999988731 112233333322 488888776655
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.55 E-value=0.0026 Score=51.27 Aligned_cols=37 Identities=27% Similarity=0.514 Sum_probs=31.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREKSGI 122 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~~~~ 122 (405)
|++|+|.|. |.+|..+++.|.+.|+ +|++.+|+++..
T Consensus 1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~ 39 (171)
T d2g5ca2 1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESI 39 (171)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHH
Confidence 357999986 9999999999999985 688888886543
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.49 E-value=0.0033 Score=51.00 Aligned_cols=78 Identities=14% Similarity=0.245 Sum_probs=50.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEE-cCCCC-HHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCF-SDVTN-LESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~-~Dl~d-~~~l~~~~~~~~~ 160 (405)
.+.+|+|.|+ |.+|...+..+...| .+|+++++++++. +..........+. .|-.| .+.+.+...+ +
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~-------~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~--~ 97 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKF-------AKAKEVGATECVNPQDYKKPIQEVLTEMSN--G 97 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-------HHHHHTTCSEEECGGGCSSCHHHHHHHHTT--S
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHH-------HHHHHhCCeeEEecCCchhHHHHHHHHHhc--C
Confidence 4678999999 779999999999998 5899999988764 2233322222221 22222 2223333333 4
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
++|++|.+.|.
T Consensus 98 G~D~vid~~G~ 108 (176)
T d2jhfa2 98 GVDFSFEVIGR 108 (176)
T ss_dssp CBSEEEECSCC
T ss_pred CCCEEEecCCc
Confidence 69999998875
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=96.47 E-value=0.0038 Score=45.19 Aligned_cols=86 Identities=22% Similarity=0.314 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCChhH-HHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIG-KFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG-~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
..++|.+.|- |++| ++||+.|.++|++|.+.|+...... +.+.. .++.+..++-. +. +++ +
T Consensus 7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~------~~L~~-~Gi~v~~g~~~--~~----i~~----~ 68 (96)
T d1p3da1 7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT------QRLAQ-AGAKIYIGHAE--EH----IEG----A 68 (96)
T ss_dssp TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH------HHHHH-TTCEEEESCCG--GG----GTT----C
T ss_pred hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh------hHHHH-CCCeEEECCcc--cc----CCC----C
Confidence 4578999887 5566 7789999999999999998754321 33444 37777665532 22 234 8
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCC
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGAS 200 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~ 200 (405)
|.||...+....+ . -+.+|++.|++
T Consensus 69 d~vV~S~AI~~~n--------p-----el~~A~~~gip 93 (96)
T d1p3da1 69 SVVVVSSAIKDDN--------P-----ELVTSKQKRIP 93 (96)
T ss_dssp SEEEECTTSCTTC--------H-----HHHHHHHTTCC
T ss_pred CEEEECCCcCCCC--------H-----HHHHHHHcCCC
Confidence 9999877765422 2 24567777764
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.47 E-value=0.0031 Score=51.09 Aligned_cols=77 Identities=16% Similarity=0.231 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhh-CCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFN-VIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENL-GTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~~ 161 (405)
.+.+|+|.|+ |.+|...++.+...|.+ |+++++++.+. +....+.-.+++ |..+.+ +.+.++.+ .++
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~-------~~a~~~Ga~~~i--~~~~~~-~~~~i~~~t~gg 96 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL-------ELAKQLGATHVI--NSKTQD-PVAAIKEITDGG 96 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH-------HHHHHHTCSEEE--ETTTSC-HHHHHHHHTTSC
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHH-------HHHHHcCCeEEE--eCCCcC-HHHHHHHHcCCC
Confidence 4678999998 99999999988888875 55666666543 233333223444 444433 22222221 146
Q ss_pred ccEEEEcccc
Q 043385 162 IDVVVSCLAS 171 (405)
Q Consensus 162 ~d~Vv~~a~~ 171 (405)
+|+||.+.|.
T Consensus 97 ~D~vid~~G~ 106 (174)
T d1f8fa2 97 VNFALESTGS 106 (174)
T ss_dssp EEEEEECSCC
T ss_pred CcEEEEcCCc
Confidence 9999999874
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=96.41 E-value=0.0014 Score=53.16 Aligned_cols=40 Identities=25% Similarity=0.254 Sum_probs=35.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
..++++|+|.|+ |+.+++++-.|.+.|.+|+++.|+.++.
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka 54 (170)
T d1nyta1 15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRA 54 (170)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHH
Confidence 456899999998 9999999999999999999999998764
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.38 E-value=0.0005 Score=56.66 Aligned_cols=33 Identities=27% Similarity=0.608 Sum_probs=27.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEe
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIA 116 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~ 116 (405)
++.||.|.||||++|+.+++.|.++. .++..+.
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~ 37 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT 37 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence 45789999999999999999999875 5666665
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.36 E-value=0.0031 Score=50.99 Aligned_cols=78 Identities=17% Similarity=0.234 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
.+.+|+|.|+ |.+|...++.+...|. .|+++++++++. +........+++..+=.+.+.+.+...+ ..+
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~-------~~~~~~ga~~~i~~~~~~~~~~~~~~~~--~g~ 101 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL-------KLAERLGADHVVDARRDPVKQVMELTRG--RGV 101 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH-------HHHHHTTCSEEEETTSCHHHHHHHHTTT--CCE
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHH-------HHHhhcccceeecCcccHHHHHHHhhCC--CCc
Confidence 3578999886 9999999998888884 677788877553 3333333334444332222223332222 459
Q ss_pred cEEEEcccc
Q 043385 163 DVVVSCLAS 171 (405)
Q Consensus 163 d~Vv~~a~~ 171 (405)
|+||.++|.
T Consensus 102 d~vid~~g~ 110 (172)
T d1h2ba2 102 NVAMDFVGS 110 (172)
T ss_dssp EEEEESSCC
T ss_pred eEEEEecCc
Confidence 999999874
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.32 E-value=0.004 Score=49.20 Aligned_cols=65 Identities=20% Similarity=0.290 Sum_probs=45.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|||.|.|. |.+|+.+++.|+++|++|++.++...+.. ..... ++.+. . +..++++. +|+|
T Consensus 1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~------~~~~~--~~~~~-~------~~~e~~~~----~diI 60 (152)
T d1i36a2 1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPST------IERAR--TVGVT-E------TSEEDVYS----CPVV 60 (152)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHH------HHHHH--HHTCE-E------CCHHHHHT----SSEE
T ss_pred CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHH------HHhhh--ccccc-c------cHHHHHhh----cCeE
Confidence 68999976 99999999999999999999887765431 11111 11111 1 23456776 9999
Q ss_pred EEccc
Q 043385 166 VSCLA 170 (405)
Q Consensus 166 v~~a~ 170 (405)
|-+..
T Consensus 61 i~~v~ 65 (152)
T d1i36a2 61 ISAVT 65 (152)
T ss_dssp EECSC
T ss_pred EEEec
Confidence 98764
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.32 E-value=0.0086 Score=48.43 Aligned_cols=78 Identities=15% Similarity=0.211 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCC--HHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTN--LESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~l~~~~~~~~~ 160 (405)
.+.+|+|+|+ |.||...+..+...|. .|++.++++++. +....+....++...-.| ...+.+...+ +
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~-------~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~--~ 97 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF-------PKAKALGATDCLNPRELDKPVQDVITELTA--G 97 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-------HHHHHTTCSEEECGGGCSSCHHHHHHHHHT--S
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHH-------HHHHHhCCCcccCCccchhhhhhhHhhhhc--C
Confidence 4679999986 9999999999999997 688888887764 223333222333222112 2334444444 5
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
++|+||.|.|.
T Consensus 98 G~d~vie~~G~ 108 (174)
T d1e3ia2 98 GVDYSLDCAGT 108 (174)
T ss_dssp CBSEEEESSCC
T ss_pred CCcEEEEeccc
Confidence 79999999884
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=96.27 E-value=0.0021 Score=51.60 Aligned_cols=97 Identities=22% Similarity=0.391 Sum_probs=57.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC-CCeEEE-EecCCCCcCCCCchhHhhhcc--CCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSR-GFNVIA-IAREKSGIRGRNDKEETLNQL--QGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~-l~r~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
+.++|.|.|++|.+|+.+++.+.+. +.++++ ++|......... ....... .++. +.-|+ ...++.
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d--~~~~~~~~~~~~~-~~~~~------~~~~~~-- 71 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSD--AGELAGAGKTGVT-VQSSL------DAVKDD-- 71 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCC--TTCSSSSSCCSCC-EESCS------TTTTTS--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccch--hhhhhccccCCce-eeccH------HHHhcc--
Confidence 3579999999999999999998886 566554 445433221100 0000000 1111 22232 233444
Q ss_pred CCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccc
Q 043385 160 TSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAI 208 (405)
Q Consensus 160 ~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~ 208 (405)
+|+||.... -.++...++.|.+.+++ +| ++|.
T Consensus 72 --~DViIDFs~-------------p~~~~~~~~~a~~~~~~-~V-iGTT 103 (162)
T d1diha1 72 --FDVFIDFTR-------------PEGTLNHLAFCRQHGKG-MV-IGTT 103 (162)
T ss_dssp --CSEEEECSC-------------HHHHHHHHHHHHHTTCE-EE-ECCC
T ss_pred --cceEEEecc-------------HHHHHHHHHHHHhccce-eE-EecC
Confidence 999998643 45677888999999874 54 3443
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.27 E-value=0.001 Score=52.86 Aligned_cols=65 Identities=12% Similarity=0.254 Sum_probs=46.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDVV 165 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~V 165 (405)
|||.+.|+ |.+|+++++.|++.|++|++.+|++++.. .+...-++.+. .+..++++. .|+|
T Consensus 1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~-------~l~~~~g~~~~-------~~~~~~~~~----~dvI 61 (152)
T d2ahra2 1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSK-------EIAEQLALPYA-------MSHQDLIDQ----VDLV 61 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHH-------HHHHHHTCCBC-------SSHHHHHHT----CSEE
T ss_pred CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHH-------hhccccceeee-------chhhhhhhc----ccee
Confidence 68999987 99999999999999999999999876542 22111122221 135566777 9999
Q ss_pred EEcc
Q 043385 166 VSCL 169 (405)
Q Consensus 166 v~~a 169 (405)
|-+.
T Consensus 62 ilav 65 (152)
T d2ahra2 62 ILGI 65 (152)
T ss_dssp EECS
T ss_pred eeec
Confidence 9764
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.24 E-value=0.0069 Score=49.01 Aligned_cols=76 Identities=20% Similarity=0.319 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCC--C--HHHHHHHHHhh
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT--N--LESLEKSLENL 158 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--d--~~~l~~~~~~~ 158 (405)
.+.+|+|.|+ |.+|...++.+...|. +|+++++++++. +....+ +...+. |.. | .+.+.+...+
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl-------~~a~~l-Ga~~~i-~~~~~d~~~~~~~~~~~~- 95 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF-------PKAIEL-GATECL-NPKDYDKPIYEVICEKTN- 95 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-------HHHHHT-TCSEEE-CGGGCSSCHHHHHHHHTT-
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHH-------HHHHHc-CCcEEE-cCCCchhHHHHHHHHhcC-
Confidence 4678999997 9999999999999985 799999988765 333333 333322 322 2 2223333333
Q ss_pred CCCccEEEEcccc
Q 043385 159 GTSIDVVVSCLAS 171 (405)
Q Consensus 159 ~~~~d~Vv~~a~~ 171 (405)
+.+|+||.+.+.
T Consensus 96 -~G~d~vid~~g~ 107 (174)
T d1p0fa2 96 -GGVDYAVECAGR 107 (174)
T ss_dssp -SCBSEEEECSCC
T ss_pred -CCCcEEEEcCCC
Confidence 469999998874
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.22 E-value=0.007 Score=49.31 Aligned_cols=64 Identities=25% Similarity=0.236 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
+.+++|.|.|. |.||+.+++.|..-|.+|++.+|.+.... ..-.+++++++.. +
T Consensus 40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~---------------------~~~~~~l~ell~~----s 93 (181)
T d1qp8a1 40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGP---------------------WRFTNSLEEALRE----A 93 (181)
T ss_dssp CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSS---------------------SCCBSCSHHHHTT----C
T ss_pred ccCceEEEecc-ccccccceeeeeccccccccccccccccc---------------------eeeeechhhhhhc----c
Confidence 57899999998 88999999999999999999998764321 0111246788887 9
Q ss_pred cEEEEccccc
Q 043385 163 DVVVSCLASR 172 (405)
Q Consensus 163 d~Vv~~a~~~ 172 (405)
|+|+.++...
T Consensus 94 Div~~~~pl~ 103 (181)
T d1qp8a1 94 RAAVCALPLN 103 (181)
T ss_dssp SEEEECCCCS
T ss_pred chhhcccccc
Confidence 9999877654
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.17 E-value=0.0043 Score=50.12 Aligned_cols=79 Identities=14% Similarity=0.220 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC-CC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG-TS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~-~~ 161 (405)
.+.+|+|.|+ |++|...++.+...|. .|++.++++++. +....+.-..++..+ .+.+.+.+.++... ++
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-------~~ak~lGa~~~i~~~-~~~~~~~~~~~~~~~~g 98 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-------ARAKEFGATECINPQ-DFSKPIQEVLIEMTDGG 98 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-------HHHHHHTCSEEECGG-GCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-------HHHHHhCCcEEEeCC-chhhHHHHHHHHHcCCC
Confidence 4678999998 6899999999988885 677777776653 223333222332211 11222333332211 46
Q ss_pred ccEEEEcccc
Q 043385 162 IDVVVSCLAS 171 (405)
Q Consensus 162 ~d~Vv~~a~~ 171 (405)
+|+||.+.|.
T Consensus 99 ~D~vid~~G~ 108 (176)
T d2fzwa2 99 VDYSFECIGN 108 (176)
T ss_dssp BSEEEECSCC
T ss_pred CcEeeecCCC
Confidence 9999999874
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.16 E-value=0.0035 Score=50.74 Aligned_cols=75 Identities=19% Similarity=0.237 Sum_probs=51.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
..++++|+|.|+ |+.+++++..|.+.+.+|+++.|+.++.... .+.+.....+..+..|-.+ +. .
T Consensus 15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l---~~~~~~~~~~~~~~~~~~~-------~~----~ 79 (171)
T d1p77a1 15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKEL---AERFQPYGNIQAVSMDSIP-------LQ----T 79 (171)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHH---HHHHGGGSCEEEEEGGGCC-------CS----C
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHH---HHHHhhccccchhhhcccc-------cc----c
Confidence 356789999988 8899999999999888999999997654211 1222322344555444221 12 4
Q ss_pred ccEEEEcccc
Q 043385 162 IDVVVSCLAS 171 (405)
Q Consensus 162 ~d~Vv~~a~~ 171 (405)
+|+|||+...
T Consensus 80 ~diiIN~tp~ 89 (171)
T d1p77a1 80 YDLVINATSA 89 (171)
T ss_dssp CSEEEECCCC
T ss_pred cceeeecccc
Confidence 8999998664
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.12 E-value=0.0015 Score=53.79 Aligned_cols=36 Identities=22% Similarity=0.369 Sum_probs=33.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
++|.|.|| |.+|+.++..++..|++|++++++++..
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l 40 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGI 40 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 67999999 9999999999999999999999987653
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.11 E-value=0.011 Score=47.92 Aligned_cols=36 Identities=28% Similarity=0.475 Sum_probs=32.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
|+|-|.|- |.+|..+++.|+++||+|.+.+|++++.
T Consensus 2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~ 37 (178)
T d1pgja2 2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKS 37 (178)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 68999987 9999999999999999999999987764
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.08 E-value=0.0026 Score=51.35 Aligned_cols=38 Identities=32% Similarity=0.433 Sum_probs=33.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGI 122 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~ 122 (405)
++++|+|.|+ |+.|++++..|.+.|. +|.++.|+.++.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka 54 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTG 54 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHH
Confidence 4678999999 9999999999999995 799999987654
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.08 E-value=0.0046 Score=46.84 Aligned_cols=37 Identities=22% Similarity=0.357 Sum_probs=33.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
.++|+|.|| |++|..++..|.+.|.+|+++.+.+.-+
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~l 66 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRLM 66 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccccc
Confidence 478999998 9999999999999999999999987654
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.05 E-value=0.0079 Score=45.97 Aligned_cols=30 Identities=17% Similarity=0.403 Sum_probs=26.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAI 115 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l 115 (405)
|||.|.|++|-.|+.|++.+.++|+++.+.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~ 30 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK 30 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence 689999999999999999999999987654
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.97 E-value=0.0062 Score=46.23 Aligned_cols=38 Identities=34% Similarity=0.489 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
...++|+|.|| |++|..++..|.+.|.+|+++.+.+.-
T Consensus 28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~ 65 (123)
T d1nhpa2 28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRP 65 (123)
T ss_dssp TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCcc
Confidence 34578999988 999999999999999999999997654
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.95 E-value=0.014 Score=47.18 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEE-cCCCC-HHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCF-SDVTN-LESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~-~Dl~d-~~~l~~~~~~~~~ 160 (405)
.+.+|+|+|+ |.+|...++.+...| .+|+++++++++. +....+.-..++. -|-.+ .+.+.+...+ .
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl-------~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g--~ 98 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF-------EKAMAVGATECISPKDSTKPISEVLSEMTG--N 98 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-------HHHHHHTCSEEECGGGCSSCHHHHHHHHHT--S
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHH-------HHHHhcCCcEEECccccchHHHHHHHHhcc--c
Confidence 4678999987 999999999999999 5899999998875 2223321222221 12222 2334444444 4
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
++|+||.+.+.
T Consensus 99 G~d~vi~~~g~ 109 (176)
T d1d1ta2 99 NVGYTFEVIGH 109 (176)
T ss_dssp CCCEEEECSCC
T ss_pred cceEEEEeCCc
Confidence 69999998874
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.91 E-value=0.0074 Score=45.25 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=33.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
.+++|+|.|| |++|..++..|.+.|.+|+++.|.+.-
T Consensus 21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI 57 (117)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred cCCeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence 3578999999 999999999999999999999988753
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=95.89 E-value=0.0038 Score=49.83 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
..-+|+|.|| |-.|..-++.....|.+|++++.+.++.+. ++.... ..++.. ..+.+.+.+.+++ +|
T Consensus 31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~----l~~~~~-~~~~~~---~~~~~~l~~~~~~----aD 97 (168)
T d1pjca1 31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSY----LETLFG-SRVELL---YSNSAEIETAVAE----AD 97 (168)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHHHG-GGSEEE---ECCHHHHHHHHHT----CS
T ss_pred CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHH----HHHhhc-ccceee---hhhhhhHHHhhcc----Cc
Confidence 3468999999 999999999999999999999998776421 111111 234443 3457889999998 99
Q ss_pred EEEEcccccC
Q 043385 164 VVVSCLASRS 173 (405)
Q Consensus 164 ~Vv~~a~~~~ 173 (405)
+||.++-...
T Consensus 98 ivI~aalipG 107 (168)
T d1pjca1 98 LLIGAVLVPG 107 (168)
T ss_dssp EEEECCCCTT
T ss_pred EEEEeeecCC
Confidence 9998766543
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=95.86 E-value=0.019 Score=43.61 Aligned_cols=95 Identities=12% Similarity=0.178 Sum_probs=62.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 86 INILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
.+|+|.|| |.+|+.+++.|... |++++++.-+..... -....++.+.. .+.+.+..+. .+++
T Consensus 4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~--------G~~I~Gi~V~~-----~~~l~~~~~~---~i~i 66 (126)
T d2dt5a2 4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKV--------GRPVRGGVIEH-----VDLLPQRVPG---RIEI 66 (126)
T ss_dssp EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTT--------TCEETTEEEEE-----GGGHHHHSTT---TCCE
T ss_pred ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhc--------CCEECCEEEec-----HHHHHHHHhh---cccE
Confidence 48999999 99999999987543 688887665443321 11224666653 3345555544 4777
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEccccc
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICV 210 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~ 210 (405)
++-+.. -...+.+++.|.++|++.+..++....
T Consensus 67 ai~~i~-------------~~~~~~I~d~l~~~gIk~I~~f~~~~l 99 (126)
T d2dt5a2 67 ALLTVP-------------REAAQKAADLLVAAGIKGILNFAPVVL 99 (126)
T ss_dssp EEECSC-------------HHHHHHHHHHHHHHTCCEEEECSSSCC
T ss_pred EEEeCC-------------HHHHHHHHHHHHHcCCCEEeecCceee
Confidence 776543 234566888899999998887765544
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.83 E-value=0.0018 Score=51.37 Aligned_cols=36 Identities=22% Similarity=0.440 Sum_probs=32.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~ 122 (405)
|+|.+.|+ |.+|+++++.|++.| ++|.+.+|++++.
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~ 37 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKR 37 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHH
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHH
Confidence 68999988 999999999999887 9999999998654
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.80 E-value=0.0028 Score=50.40 Aligned_cols=25 Identities=28% Similarity=0.490 Sum_probs=22.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF 110 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~ 110 (405)
-+|.|.||||++|+.+++.|.++.+
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCC
Confidence 4799999999999999999988754
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.76 E-value=0.018 Score=45.87 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=33.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
.+.+|+|.|+ |.+|...++.+...|++|+++++++++.
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~ 64 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKL 64 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHH
Confidence 4678999887 9999999998888999999999987654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.69 E-value=0.011 Score=44.44 Aligned_cols=36 Identities=28% Similarity=0.378 Sum_probs=32.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
.++|+|.|| |++|..++..|.+.|.+|+++.|.+.-
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~i 57 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNRI 57 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhccc
Confidence 478999999 999999999999999999999998653
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.68 E-value=0.014 Score=47.94 Aligned_cols=72 Identities=21% Similarity=0.203 Sum_probs=52.6
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
....+++|.|.|. |.||+.+++.|..-|.+|.+.++...... .... ++ ...+++.++++.
T Consensus 45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~--------~~~~-~~-------~~~~~l~~ll~~--- 104 (193)
T d1mx3a1 45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGV--------ERAL-GL-------QRVSTLQDLLFH--- 104 (193)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTH--------HHHH-TC-------EECSSHHHHHHH---
T ss_pred eeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccc--------hhhh-cc-------ccccchhhcccc---
Confidence 4578899999988 99999999999999999999998754321 1110 11 113357788888
Q ss_pred CccEEEEcccccC
Q 043385 161 SIDVVVSCLASRS 173 (405)
Q Consensus 161 ~~d~Vv~~a~~~~ 173 (405)
.|+|+.+.....
T Consensus 105 -sD~i~~~~plt~ 116 (193)
T d1mx3a1 105 -SDCVTLHCGLNE 116 (193)
T ss_dssp -CSEEEECCCCCT
T ss_pred -CCEEEEeecccc
Confidence 999988776543
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=95.55 E-value=0.013 Score=44.12 Aligned_cols=37 Identities=19% Similarity=0.129 Sum_probs=33.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
.+++++|.|| |+||..++..|.+.|.+|+++.|.+.-
T Consensus 21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~l 57 (119)
T d3lada2 21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDKF 57 (119)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeeccc
Confidence 4578999999 999999999999999999999998654
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.55 E-value=0.0089 Score=45.24 Aligned_cols=36 Identities=17% Similarity=0.188 Sum_probs=33.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
.++++|.|| |+||..++..|.+.|.+|+++.|.+.-
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence 478999999 999999999999999999999998754
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=95.55 E-value=0.009 Score=44.73 Aligned_cols=36 Identities=22% Similarity=0.228 Sum_probs=32.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
+++|+|.|| |++|..++..|.+.|.+|+++.|.+.-
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAP 56 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecchh
Confidence 478999999 999999999999999999999998754
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.43 E-value=0.0086 Score=45.29 Aligned_cols=35 Identities=26% Similarity=0.500 Sum_probs=31.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
.++|+|.|| |++|-.++..|.+.|++|+++.|.+.
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 368999998 99999999999999999999998764
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.37 E-value=0.011 Score=44.19 Aligned_cols=37 Identities=24% Similarity=0.331 Sum_probs=33.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
+++++|.|| |++|..++..|.+.|++|+++.|.+.-.
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~il 57 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARERIL 57 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecccc
Confidence 478999998 9999999999999999999999987543
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.37 E-value=0.011 Score=44.89 Aligned_cols=37 Identities=22% Similarity=0.283 Sum_probs=33.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
+++|+|.|| |++|..++..|.+.|.+|+++.|.+.-+
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~~l 58 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDKVL 58 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccccc
Confidence 478999999 9999999999999999999999987543
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.36 E-value=0.0068 Score=49.91 Aligned_cols=38 Identities=16% Similarity=0.342 Sum_probs=34.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
+-++|.|.|| |.+|+.++..++..|++|++++++++..
T Consensus 3 ~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l 40 (192)
T d1f0ya2 3 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDIL 40 (192)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred eeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHH
Confidence 3478999999 9999999999999999999999998654
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.35 E-value=0.023 Score=46.63 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHH---HHHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLE---SLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~l~~~~~~~~ 159 (405)
.+.+|+|.|+ |.+|...+..+...|. +|+++++++++. +..... +...+. |-.+.+ .+.+...+
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl-------~~a~~~-Ga~~~~-~~~~~~~~~~i~~~t~g-- 92 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL-------AHAKAQ-GFEIAD-LSLDTPLHEQIAALLGE-- 92 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-------HHHHHT-TCEEEE-TTSSSCHHHHHHHHHSS--
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhh-------Hhhhhc-cccEEE-eCCCcCHHHHHHHHhCC--
Confidence 4679999987 9999888888877775 788888887654 333333 455443 333322 33443333
Q ss_pred CCccEEEEccccc
Q 043385 160 TSIDVVVSCLASR 172 (405)
Q Consensus 160 ~~~d~Vv~~a~~~ 172 (405)
..+|++|.+.|..
T Consensus 93 ~g~D~vid~vG~~ 105 (195)
T d1kola2 93 PEVDCAVDAVGFE 105 (195)
T ss_dssp SCEEEEEECCCTT
T ss_pred CCcEEEEECcccc
Confidence 4699999998843
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.32 E-value=0.01 Score=44.90 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE 118 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~ 118 (405)
.+++++|.|| |+||..++..|.+.|.+|+++.|+
T Consensus 19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 3468999999 999999999999999999999875
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.31 E-value=0.012 Score=45.23 Aligned_cols=38 Identities=24% Similarity=0.437 Sum_probs=34.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
.+++|+|.|| |++|..++..|.+.|.+|+++.+.+.-.
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~l 71 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARVL 71 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccccc
Confidence 3578999999 9999999999999999999999987643
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.27 E-value=0.018 Score=45.83 Aligned_cols=74 Identities=18% Similarity=0.311 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCC-CH-HHHHHHHHhhCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVT-NL-ESLEKSLENLGTS 161 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~-~~l~~~~~~~~~~ 161 (405)
.+.+|+|.|+ |.+|...++.+...|++|+++++++++. +..... +...+...-. |. +.+.+..++
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~-------~~~k~~-Ga~~~~~~~~~~~~~~~~~~~~~---- 93 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL-------ELAKEL-GADLVVNPLKEDAAKFMKEKVGG---- 93 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH-------HHHHHT-TCSEEECTTTSCHHHHHHHHHSS----
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHh-------hhhhhc-CcceecccccchhhhhcccccCC----
Confidence 4578999876 9999999999999999999999887654 223333 4444442222 22 234444444
Q ss_pred ccEEEEccc
Q 043385 162 IDVVVSCLA 170 (405)
Q Consensus 162 ~d~Vv~~a~ 170 (405)
.|.+|.+++
T Consensus 94 ~~~~v~~~~ 102 (168)
T d1rjwa2 94 VHAAVVTAV 102 (168)
T ss_dssp EEEEEESSC
T ss_pred CceEEeecC
Confidence 566666654
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=95.27 E-value=0.022 Score=47.00 Aligned_cols=67 Identities=21% Similarity=0.184 Sum_probs=50.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+..+++|.|.|. |.||+.+++.|..-|.+|++.++...... ...+. ..++.++++.
T Consensus 42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----------~~~~~--------~~~l~~l~~~---- 97 (199)
T d1dxya1 42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGD-----------HPDFD--------YVSLEDLFKQ---- 97 (199)
T ss_dssp CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSC-----------CTTCE--------ECCHHHHHHH----
T ss_pred cccceeeeeeec-ccccccccccccccceeeeccCCccchhh-----------hcchh--------HHHHHHHHHh----
Confidence 466789999998 99999999999999999999998754321 01121 1246778887
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
+|+|+.+....
T Consensus 98 ~D~v~~~~plt 108 (199)
T d1dxya1 98 SDVIDLHVPGI 108 (199)
T ss_dssp CSEEEECCCCC
T ss_pred cccceeeeccc
Confidence 89998766544
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.26 E-value=0.086 Score=44.69 Aligned_cols=106 Identities=18% Similarity=0.214 Sum_probs=63.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCch------------hH----hhh-ccCCcEEEEcCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDK------------EE----TLN-QLQGASVCFSDV 145 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~------------~~----~~~-~~~~v~~~~~Dl 145 (405)
+..+|+|.|+ |++|++++..|++.|. +++++|.+.-......+. .+ .+. -.+.+++...+.
T Consensus 29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~ 107 (247)
T d1jw9b_ 29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 107 (247)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhh
Confidence 4579999997 9999999999999995 788888654222111110 00 011 124555554443
Q ss_pred C-CHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 146 T-NLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 146 ~-d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
. +.+.....+.. .|+||.+.. |...-..+-++|.+.++. +|+.+.
T Consensus 108 ~~~~~~~~~~~~~----~divid~~d------------~~~~~~~in~~~~~~~ip-~i~g~~ 153 (247)
T d1jw9b_ 108 LLDDAELAALIAE----HDLVLDCTD------------NVAVRNQLNAGCFAAKVP-LVSGAA 153 (247)
T ss_dssp CCCHHHHHHHHHT----SSEEEECCS------------SHHHHHHHHHHHHHHTCC-EEEEEE
T ss_pred hhhhccccccccc----cceeeeccc------------hhhhhhhHHHHHHHhCCC-cccccc
Confidence 2 33445556666 899887643 233344455667777764 555443
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=95.16 E-value=0.014 Score=49.51 Aligned_cols=34 Identities=32% Similarity=0.519 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK 119 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~ 119 (405)
.++|+|+|| |..|...+..|.++|++|+++.|..
T Consensus 6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 368999999 9999999999999999999999864
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.14 E-value=0.01 Score=46.66 Aligned_cols=36 Identities=25% Similarity=0.468 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE 118 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~ 118 (405)
.+++++|||+|| |.+|..-++.|++.|.+|++++..
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 367899999999 999999999999999999999754
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.14 E-value=0.041 Score=43.61 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=33.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE 118 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~ 118 (405)
+..+++|+|.|-+.-+|+.++..|.++|+.|+.+...
T Consensus 34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~ 70 (166)
T d1b0aa1 34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 70 (166)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred ccccceEEEEeccccccHHHHHHHHHhhccccccccc
Confidence 5789999999999999999999999999999877543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=95.12 E-value=0.048 Score=43.54 Aligned_cols=78 Identities=18% Similarity=0.282 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCCCCchhHhhhccCCcEEEEc-CCCC-HHHHHHHHHhhCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRGRNDKEETLNQLQGASVCFS-DVTN-LESLEKSLENLGT 160 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~-Dl~d-~~~l~~~~~~~~~ 160 (405)
.+.+|+|+|+ |.+|...+..+...| .+|+++++++++. +....+.-..++.. +-.+ .+.+.+...+ +
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl-------~~a~~~GAd~~in~~~~~~~~~~~~~~~~~--~ 97 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF-------EKAKVFGATDFVNPNDHSEPISQVLSKMTN--G 97 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-------HHHHHTTCCEEECGGGCSSCHHHHHHHHHT--S
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHH-------HHHHHcCCcEEEcCCCcchhHHHHHHhhcc--C
Confidence 4578999987 668888888888876 5799999988765 33333322233321 1111 2334444443 4
Q ss_pred CccEEEEcccc
Q 043385 161 SIDVVVSCLAS 171 (405)
Q Consensus 161 ~~d~Vv~~a~~ 171 (405)
++|+|+.+.|.
T Consensus 98 G~d~vid~~G~ 108 (175)
T d1cdoa2 98 GVDFSLECVGN 108 (175)
T ss_dssp CBSEEEECSCC
T ss_pred CcceeeeecCC
Confidence 69999999874
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=95.07 E-value=0.014 Score=49.84 Aligned_cols=37 Identities=24% Similarity=0.196 Sum_probs=33.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
+.+||+|+|| |..|..++..|.++|++|+++.|+++.
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~~ 39 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQP 39 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 4579999999 999999999999999999999987653
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.01 E-value=0.038 Score=44.99 Aligned_cols=68 Identities=21% Similarity=0.145 Sum_probs=50.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+..+++|.|.|- |.||+.+++.|..-|.+|.+.++...... ... .. .+.++++++.
T Consensus 41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~------------~~~--~~-----~~~l~ell~~---- 96 (188)
T d1sc6a1 41 EARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPL------------GNA--TQ-----VQHLSDLLNM---- 96 (188)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCC------------TTC--EE-----CSCHHHHHHH----
T ss_pred cccceEEEEeec-ccchhhhhhhcccccceEeeccccccchh------------hhh--hh-----hhhHHHHHhh----
Confidence 467789999977 99999999999999999999998654321 011 11 1357788888
Q ss_pred ccEEEEcccccC
Q 043385 162 IDVVVSCLASRS 173 (405)
Q Consensus 162 ~d~Vv~~a~~~~ 173 (405)
.|+|+.++....
T Consensus 97 sDii~i~~plt~ 108 (188)
T d1sc6a1 97 SDVVSLHVPENP 108 (188)
T ss_dssp CSEEEECCCSST
T ss_pred ccceeecccCCc
Confidence 999988776554
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.00 E-value=0.029 Score=46.11 Aligned_cols=68 Identities=24% Similarity=0.333 Sum_probs=50.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+..+++|.|.|- |.||+.+++.|..-|.+|.+.++..... ... ... ..+++.++++.
T Consensus 40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~---------~~~-~~~--------~~~~l~~~l~~---- 96 (197)
T d1j4aa1 40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPE---------LEK-KGY--------YVDSLDDLYKQ---- 96 (197)
T ss_dssp CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHH---------HHH-TTC--------BCSCHHHHHHH----
T ss_pred cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccc---------ccc-cee--------eeccccccccc----
Confidence 456899999998 9999999999999999999998764321 111 111 12347788888
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
.|+|+.++...
T Consensus 97 sDii~~~~plt 107 (197)
T d1j4aa1 97 ADVISLHVPDV 107 (197)
T ss_dssp CSEEEECSCCC
T ss_pred cccccccCCcc
Confidence 99998877654
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.98 E-value=0.051 Score=41.84 Aligned_cols=85 Identities=16% Similarity=0.209 Sum_probs=57.3
Q ss_pred CCeEEEEcCC---ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGST---GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.++|.|.||+ +..|..+++.|.+.||+|+.+..+.... .+..++ -++.|. .+.
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i-------------~G~~~~-~sl~dl----------p~~ 74 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV-------------LGRKCY-PSVLDI----------PDK 74 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-------------TTEECB-SSGGGC----------SSC
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc-------------CCCccc-cccccc----------Ccc
Confidence 4789999998 7899999999999999988776443221 122221 132221 124
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
+|.|+-+.. ...+..+++.|.+.|++.+++..
T Consensus 75 iD~v~i~vp-------------~~~~~~~~~e~~~~g~k~v~~~~ 106 (139)
T d2d59a1 75 IEVVDLFVK-------------PKLTMEYVEQAIKKGAKVVWFQY 106 (139)
T ss_dssp CSEEEECSC-------------HHHHHHHHHHHHHHTCSEEEECT
T ss_pred ceEEEEEeC-------------HHHHHHHHHHHHHhCCCEEEEec
Confidence 888886543 34566788888888998766544
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.97 E-value=0.036 Score=45.28 Aligned_cols=73 Identities=12% Similarity=0.106 Sum_probs=52.1
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGT 160 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 160 (405)
....+++|.|.|. |.||+.+++.|..-|.+|.+.++...... ..... . ....++++++++.
T Consensus 43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~-------~~~~~-~-------~~~~~~l~~ll~~--- 103 (191)
T d1gdha1 43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSS-------DEASY-Q-------ATFHDSLDSLLSV--- 103 (191)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHH-------HHHHH-T-------CEECSSHHHHHHH---
T ss_pred ceecccceEEeec-ccchHHHHHHHHhhccccccccccccccc-------hhhcc-c-------ccccCCHHHHHhh---
Confidence 3567899999998 99999999999999999999987654321 11110 1 1112457888888
Q ss_pred CccEEEEcccccC
Q 043385 161 SIDVVVSCLASRS 173 (405)
Q Consensus 161 ~~d~Vv~~a~~~~ 173 (405)
.|+|+.+.....
T Consensus 104 -sD~v~l~~plt~ 115 (191)
T d1gdha1 104 -SQFFSLNAPSTP 115 (191)
T ss_dssp -CSEEEECCCCCT
T ss_pred -CCeEEecCCCCc
Confidence 999987766543
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.97 E-value=0.05 Score=44.12 Aligned_cols=70 Identities=26% Similarity=0.280 Sum_probs=50.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
...++++.|.|. |.||+.+++.|..-|.+|.+.++...+. .... .+++. .+++++++.
T Consensus 41 ~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~--------~~~~-~~~~~--------~~l~ell~~---- 98 (184)
T d1ygya1 41 EIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPA--------RAAQ-LGIEL--------LSLDDLLAR---- 98 (184)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHH--------HHHH-HTCEE--------CCHHHHHHH----
T ss_pred cccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChh--------HHhh-cCcee--------ccHHHHHhh----
Confidence 467789999887 9999999999999899999998875432 1111 12222 236788888
Q ss_pred ccEEEEcccccC
Q 043385 162 IDVVVSCLASRS 173 (405)
Q Consensus 162 ~d~Vv~~a~~~~ 173 (405)
+|+|+.+.....
T Consensus 99 sDiv~~~~Plt~ 110 (184)
T d1ygya1 99 ADFISVHLPKTP 110 (184)
T ss_dssp CSEEEECCCCST
T ss_pred CCEEEEcCCCCc
Confidence 999988776543
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.94 E-value=0.032 Score=44.62 Aligned_cols=81 Identities=16% Similarity=0.158 Sum_probs=53.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCC--CCHHHHHHHHHhhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDV--TNLESLEKSLENLG 159 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~~~l~~~~~~~~ 159 (405)
+.++++|+|.|-+.-+|+-++..|+++|..|+.+..+...... ......-......|+ -..+.+++....
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~lk~~~~~-- 97 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT------RGESLKLNKHHVEDLGEYSEDLLKKCSLD-- 97 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE------SCCCSSCCCCEEEEEEECCHHHHHHHHHH--
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccc------cccceeeeeeccccccccchhHHhhcccc--
Confidence 5789999999999999999999999999999877654321100 000000000111222 235668888877
Q ss_pred CCccEEEEccccc
Q 043385 160 TSIDVVVSCLASR 172 (405)
Q Consensus 160 ~~~d~Vv~~a~~~ 172 (405)
+|+||..+|..
T Consensus 98 --aDIvIsavG~p 108 (171)
T d1edza1 98 --SDVVITGVPSE 108 (171)
T ss_dssp --CSEEEECCCCT
T ss_pred --CCEEEEccCCC
Confidence 99999887754
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=94.93 E-value=0.026 Score=45.44 Aligned_cols=36 Identities=22% Similarity=0.238 Sum_probs=33.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
-+|+|.|| |-.|..-++-...-|.+|.+++.++++.
T Consensus 30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~ 65 (183)
T d1l7da1 30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK 65 (183)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHH
Confidence 58999999 9999999999999999999999998765
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=94.73 E-value=0.024 Score=45.88 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=33.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
.++++|+|.|| |..|...+..|.++||+|+++.+.+.
T Consensus 41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence 45689999999 99999999999999999999999764
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.69 E-value=0.027 Score=42.14 Aligned_cols=37 Identities=14% Similarity=0.090 Sum_probs=33.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
.+++|+|.|| |++|..++..|.+.|.+|.++.|.+.-
T Consensus 21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~~ 57 (121)
T d1mo9a2 21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEPL 57 (121)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccchh
Confidence 3579999998 999999999999999999999998654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=94.65 E-value=0.021 Score=43.09 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=34.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
.+++++|.|| |+||-.++..|.+.|.+|+++.|.+.-.
T Consensus 24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~l 61 (123)
T d1dxla2 24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEIV 61 (123)
T ss_dssp CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccccC
Confidence 3578999999 9999999999999999999999987654
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=94.54 E-value=0.064 Score=42.73 Aligned_cols=36 Identities=22% Similarity=0.517 Sum_probs=27.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEe-cCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSR-GFNVIAIA-REKS 120 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~-r~~~ 120 (405)
+++||.|.|. |++|+.+++.|.+. +.+++++. |+++
T Consensus 2 ~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~ 39 (170)
T d1f06a1 2 TNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRAT 39 (170)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSC
T ss_pred CcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecccc
Confidence 4578999996 99999999999886 56766544 4443
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.49 E-value=0.018 Score=46.71 Aligned_cols=35 Identities=14% Similarity=0.299 Sum_probs=31.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKS 120 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~ 120 (405)
++||+|.|| |..|...|..|.++|+ +|+++.|.+.
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 579999999 9999999999999998 5999998754
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=94.48 E-value=0.027 Score=42.66 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=33.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
.+++++|.|| |+||..++..|.+.|.+|+++.+.+.-.
T Consensus 25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~il 62 (125)
T d1ojta2 25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDGLM 62 (125)
T ss_dssp CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecccc
Confidence 3578999999 9999999999999999999999986543
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=94.47 E-value=0.019 Score=47.45 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=34.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
++++++|+|-|- |.+|+++++.|.+.|.+|++.+.++..
T Consensus 24 ~L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~ 62 (201)
T d1c1da1 24 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTER 62 (201)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHH
Confidence 578899999985 999999999999999999988876543
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=94.43 E-value=0.1 Score=41.84 Aligned_cols=32 Identities=28% Similarity=0.605 Sum_probs=26.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG-FNVIAIARE 118 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~ 118 (405)
-||.|.| .|.||+.+++.|.+++ .+|+++...
T Consensus 2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~ 34 (178)
T d1b7go1 2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT 34 (178)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence 4799998 5999999999999875 677777543
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.43 E-value=0.034 Score=51.47 Aligned_cols=35 Identities=26% Similarity=0.519 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREK 119 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~ 119 (405)
+..||||.|+ |++|.++++.|+..|. ++++++.+.
T Consensus 36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~ 71 (426)
T d1yovb1 36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT 71 (426)
T ss_dssp HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 3468999999 7799999999999996 799998754
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.40 E-value=0.022 Score=45.10 Aligned_cols=69 Identities=17% Similarity=0.214 Sum_probs=50.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.+.+|+|+|.|= |.||+.+++.|...|.+|++.++++.+. ......+.++. .+++++..
T Consensus 21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~a--------l~A~~dG~~v~--------~~~~a~~~---- 79 (163)
T d1li4a1 21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINA--------LQAAMEGYEVT--------TMDEACQE---- 79 (163)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH--------HHHHHTTCEEC--------CHHHHTTT----
T ss_pred eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchh--------HHhhcCceEee--------ehhhhhhh----
Confidence 467899999886 9999999999999999999999987432 11122344433 25566666
Q ss_pred ccEEEEcccc
Q 043385 162 IDVVVSCLAS 171 (405)
Q Consensus 162 ~d~Vv~~a~~ 171 (405)
.|+||-+.|.
T Consensus 80 adivvtaTGn 89 (163)
T d1li4a1 80 GNIFVTTTGC 89 (163)
T ss_dssp CSEEEECSSC
T ss_pred ccEEEecCCC
Confidence 8999987774
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.38 E-value=0.084 Score=40.31 Aligned_cols=29 Identities=21% Similarity=0.389 Sum_probs=24.1
Q ss_pred eEEEEcCCChhHHHHHHHHHhC-CCeEEEE
Q 043385 87 NILVVGSTGYIGKFVVEELVSR-GFNVIAI 115 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~l 115 (405)
||.|.|++|-.|+.+++.+.+. ++++.+.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~ 30 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAE 30 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence 6899999999999999988775 5676543
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=94.35 E-value=0.043 Score=44.64 Aligned_cols=72 Identities=18% Similarity=0.138 Sum_probs=51.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
+..+++|.|.|. |.||+.+++.|..-|.+|.+.+|..... ...... ++ ....++.+.++.
T Consensus 41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~-------~~~~~~-~~-------~~~~~l~~~l~~---- 100 (188)
T d2naca1 41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPE-------SVEKEL-NL-------TWHATREDMYPV---- 100 (188)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCH-------HHHHHH-TC-------EECSSHHHHGGG----
T ss_pred eccccceeeccc-cccchhhhhhhhccCceEEEEeeccccc-------cccccc-cc-------cccCCHHHHHHh----
Confidence 467889999987 9999999999999999999999875432 111111 11 123446677887
Q ss_pred ccEEEEcccccC
Q 043385 162 IDVVVSCLASRS 173 (405)
Q Consensus 162 ~d~Vv~~a~~~~ 173 (405)
.|+|+.+.....
T Consensus 101 sD~v~~~~plt~ 112 (188)
T d2naca1 101 CDVVTLNCPLHP 112 (188)
T ss_dssp CSEEEECSCCCT
T ss_pred ccchhhcccccc
Confidence 999987666543
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.33 E-value=0.091 Score=41.96 Aligned_cols=32 Identities=28% Similarity=0.467 Sum_probs=25.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEec
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-FNVIAIAR 117 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r 117 (405)
.+||.|-|- |-||+.+++.|.++. .+|+++.-
T Consensus 2 ~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd 34 (172)
T d2czca2 2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITK 34 (172)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEE
T ss_pred cEEEEEECC-CHHHHHHHHHHHhCCCceEEEEec
Confidence 468999997 999999999998875 56666553
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=94.33 E-value=0.033 Score=43.89 Aligned_cols=70 Identities=16% Similarity=0.228 Sum_probs=53.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
-..+|+++|.|= |.+|+.+++.|...|.+|+++.++|-+. ......+.++.. ++++++.
T Consensus 20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~a--------lqA~mdGf~v~~--------~~~a~~~---- 78 (163)
T d1v8ba1 20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICA--------IQAVMEGFNVVT--------LDEIVDK---- 78 (163)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHH--------HHHHTTTCEECC--------HHHHTTT----
T ss_pred eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhh--------HHHHhcCCccCc--------hhHcccc----
Confidence 357899999988 9999999999999999999999987532 122234555433 5577776
Q ss_pred ccEEEEccccc
Q 043385 162 IDVVVSCLASR 172 (405)
Q Consensus 162 ~d~Vv~~a~~~ 172 (405)
.|++|-+.|..
T Consensus 79 aDi~vTaTGn~ 89 (163)
T d1v8ba1 79 GDFFITCTGNV 89 (163)
T ss_dssp CSEEEECCSSS
T ss_pred CcEEEEcCCCC
Confidence 89999877754
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.31 E-value=0.075 Score=42.25 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=35.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
+..+++|+|.|.+.-+|+.++..|+++|..|+.+.....
T Consensus 36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~ 74 (170)
T d1a4ia1 36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA 74 (170)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred ccccceEEEEecCCccchHHHHHHHhccCceEEEecccc
Confidence 578999999999999999999999999999998876543
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.29 E-value=0.039 Score=41.11 Aligned_cols=83 Identities=20% Similarity=0.385 Sum_probs=55.3
Q ss_pred CeEEEEcCC---ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCc
Q 043385 86 INILVVGST---GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSI 162 (405)
Q Consensus 86 ~~vlVtGat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~ 162 (405)
|+|.|.|++ +..|..+.+.|++.||+|+.+..+.+.. .+...+ -++.|. .+.+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i-------------~G~~~y-~sl~~l----------p~~~ 57 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-------------EGLKCY-RSVREL----------PKDV 57 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-------------TTEECB-SSGGGS----------CTTC
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc-------------cCcccc-ccchhc----------cccc
Confidence 679999998 7799999999999999988775432211 122222 122221 1248
Q ss_pred cEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEE
Q 043385 163 DVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205 (405)
Q Consensus 163 d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~ 205 (405)
|.++-+.. -..+..+++.|.+.|++.+++-
T Consensus 58 D~vvi~vp-------------~~~~~~~l~~~~~~g~k~v~~~ 87 (116)
T d1y81a1 58 DVIVFVVP-------------PKVGLQVAKEAVEAGFKKLWFQ 87 (116)
T ss_dssp CEEEECSC-------------HHHHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEEEeC-------------HHHHHHHHHHHHhcCCceEEec
Confidence 98886543 3456678888888999876543
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=94.19 E-value=0.019 Score=39.42 Aligned_cols=36 Identities=17% Similarity=0.311 Sum_probs=32.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
+|+|.|.|+ |.+|+.++.+-.+-|++|++++-+++.
T Consensus 1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 368999999 999999999999999999999977654
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=94.16 E-value=0.028 Score=49.84 Aligned_cols=35 Identities=29% Similarity=0.572 Sum_probs=32.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
.|+|+|.|| |.-|...|..|.++|++|.++.++..
T Consensus 2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 589999999 99999999999999999999998764
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.13 E-value=0.27 Score=36.33 Aligned_cols=76 Identities=13% Similarity=0.184 Sum_probs=53.2
Q ss_pred CCeEEEEcCCC----------hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHH
Q 043385 85 DINILVVGSTG----------YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKS 154 (405)
Q Consensus 85 ~~~vlVtGatG----------~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~ 154 (405)
.++|||.|+.. +.+.+.+++|.+.|++++.+.-+++... ....-..-+...--..+.+.+.
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVs---------td~d~aD~lYfeplt~e~v~~I 74 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVS---------TDYDTSDRLYFEPVTLEDVLEI 74 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSST---------TSTTSSSEEECCCCSHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhh---------cChhhcCceEEccCCHHHHHHH
Confidence 47899999954 6788999999999999999999987642 1111122233333456777777
Q ss_pred HHhhCCCccEEEEcccc
Q 043385 155 LENLGTSIDVVVSCLAS 171 (405)
Q Consensus 155 ~~~~~~~~d~Vv~~a~~ 171 (405)
++. +++|.|+-..|.
T Consensus 75 i~~--E~p~~ii~~~GG 89 (121)
T d1a9xa4 75 VRI--EKPKGVIVQYGG 89 (121)
T ss_dssp HHH--HCCSEEECSSST
T ss_pred HHH--hCCCEEEeehhh
Confidence 765 469999866553
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=94.01 E-value=0.036 Score=44.44 Aligned_cols=77 Identities=13% Similarity=0.166 Sum_probs=46.2
Q ss_pred CCeEEEEcCCChhHHH--HHHHHHhC----CCeEEEEecCCCCcCCCCchhHhhhc-c-CCcEEEEcCCCCHHHHHHHHH
Q 043385 85 DINILVVGSTGYIGKF--VVEELVSR----GFNVIAIAREKSGIRGRNDKEETLNQ-L-QGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~--l~~~L~~~----g~~V~~l~r~~~~~~~~~~~~~~~~~-~-~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
.|||.|.|| |.+|.. ++..|+.. +.+|+++++++++............. . ...++.. ..+.+++++
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~-----~td~~eaL~ 75 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK-----TMNLDDVII 75 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE-----ESCHHHHHT
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE-----eCChhhccc
Confidence 379999998 888865 34445543 35999999998765322211111111 1 1233322 123567788
Q ss_pred hhCCCccEEEEcccc
Q 043385 157 NLGTSIDVVVSCLAS 171 (405)
Q Consensus 157 ~~~~~~d~Vv~~a~~ 171 (405)
+ +|+||+.++.
T Consensus 76 d----ad~Vv~~~~~ 86 (171)
T d1obba1 76 D----ADFVINTAMV 86 (171)
T ss_dssp T----CSEEEECCCT
T ss_pred C----CCeEeeeccc
Confidence 8 9999998764
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=93.97 E-value=0.086 Score=41.43 Aligned_cols=35 Identities=17% Similarity=0.374 Sum_probs=23.8
Q ss_pred CCeEEEEcCCChhHHHHH-HHHHhC-CCeEEEE-ecCCC
Q 043385 85 DINILVVGSTGYIGKFVV-EELVSR-GFNVIAI-AREKS 120 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~-~~L~~~-g~~V~~l-~r~~~ 120 (405)
+.+|.|.| +|.+|+.+. +.|... ..+++++ +|+.+
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~ 41 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA 41 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence 46899999 899998654 555444 3567666 46554
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=93.86 E-value=0.028 Score=44.67 Aligned_cols=34 Identities=21% Similarity=0.212 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEecCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF--NVIAIAREK 119 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~l~r~~ 119 (405)
+|||+|.|| |++|-.++..|.+.+. +|+++.+.+
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 689999999 9999999999999874 788888765
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=93.72 E-value=0.033 Score=48.09 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=31.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
+|||+|+|| |.-|...+.+|.++|++|+++.+++.
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~~ 35 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEGK 35 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 478999999 99999999999999999999987653
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=93.61 E-value=0.024 Score=47.77 Aligned_cols=73 Identities=15% Similarity=0.294 Sum_probs=49.8
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 80 NKNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 80 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
..++++++|+|-|- |.+|+++++.|.+.|.+|++.+.+.... .......+.+.+ +++ +.+.
T Consensus 34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~-------~~~~~~~g~~~~-----~~~---~~~~--- 94 (230)
T d1leha1 34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAV-------SAAVAEEGADAV-----APN---AIYG--- 94 (230)
T ss_dssp SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH-------HHHHHHHCCEEC-----CGG---GTTT---
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHH-------HHHHHhcCCccc-----CCc---cccc---
Confidence 34578999999988 9999999999999999999887765432 122221233322 222 1222
Q ss_pred CCccEEEEcccc
Q 043385 160 TSIDVVVSCLAS 171 (405)
Q Consensus 160 ~~~d~Vv~~a~~ 171 (405)
-++|+++-||-.
T Consensus 95 ~~cDIl~PcA~~ 106 (230)
T d1leha1 95 VTCDIFAPCALG 106 (230)
T ss_dssp CCCSEEEECSCS
T ss_pred ccccEecccccc
Confidence 269999998764
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=93.57 E-value=0.031 Score=47.98 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=29.5
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREK 119 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~ 119 (405)
|+|+|| |.+|..++.+|+++|++|+++.+..
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 999999 9999999999999999999999865
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.39 E-value=0.14 Score=38.36 Aligned_cols=77 Identities=21% Similarity=0.344 Sum_probs=55.1
Q ss_pred CCCeEEEEcCCC----------hhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHH
Q 043385 84 KDINILVVGSTG----------YIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEK 153 (405)
Q Consensus 84 ~~~~vlVtGatG----------~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~ 153 (405)
..++|||.|+.. +.+.+.+++|.+.|++++.+.-+++... ....-..-+...--..+.+.+
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVs---------td~d~aD~lYfePlt~e~v~~ 76 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIM---------TDPEMADATYIEPIHWEVVRK 76 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGG---------GCGGGSSEEECSCCCHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhh---------cChhhcceeeeecCCHHHHHH
Confidence 457999999943 6789999999999999999999887642 111111223344455788888
Q ss_pred HHHhhCCCccEEEEcccc
Q 043385 154 SLENLGTSIDVVVSCLAS 171 (405)
Q Consensus 154 ~~~~~~~~~d~Vv~~a~~ 171 (405)
.++. +++|.|+-..|.
T Consensus 77 Ii~~--E~pd~il~~~GG 92 (127)
T d1a9xa3 77 IIEK--ERPDAVLPTMGG 92 (127)
T ss_dssp HHHH--HCCSEEECSSSH
T ss_pred HHHH--hCcCCeEEEeee
Confidence 8876 579999976653
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=93.07 E-value=0.037 Score=47.62 Aligned_cols=34 Identities=32% Similarity=0.514 Sum_probs=31.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
|+|+|+|| |.-|...+..|.++|++|+++.+++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~ 34 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR 34 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 67999999 99999999999999999999998653
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=92.83 E-value=0.12 Score=40.38 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=26.9
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
||.+.|- |.+|..+++.|++.|+.| +..|+.++
T Consensus 2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~ 34 (156)
T d2cvza2 2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEK 34 (156)
T ss_dssp CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence 5788887 999999999999999866 56666544
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=92.80 E-value=0.051 Score=47.54 Aligned_cols=36 Identities=19% Similarity=0.359 Sum_probs=32.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
..++|+|+|| |..|...+..|.++|++|+++.+.+.
T Consensus 29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~ 64 (370)
T d2iida1 29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER 64 (370)
T ss_dssp SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4579999999 99999999999999999999998653
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.62 E-value=0.094 Score=43.90 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 83 PKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 83 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
...++|+|.|| |..|...+..|.++|++|+++.+...
T Consensus 47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 45689999999 99999999999999999999988764
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=92.40 E-value=0.2 Score=38.17 Aligned_cols=86 Identities=17% Similarity=0.218 Sum_probs=54.0
Q ss_pred CCeEEEEcCC---ChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 85 DINILVVGST---GYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 85 ~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.++|.|.||| +..|..+++.|.+.|+++..+.-++... ...+... .-++.|.. +.
T Consensus 13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~-----------~i~g~~~-~~~l~~i~----------~~ 70 (136)
T d1iuka_ 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGE-----------ELFGEEA-VASLLDLK----------EP 70 (136)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTS-----------EETTEEC-BSSGGGCC----------SC
T ss_pred CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccc-----------eeeceec-ccchhhcc----------CC
Confidence 4789999999 6799999999999999988776543211 0112111 11222211 24
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEE
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLL 205 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~ 205 (405)
+|.|+-+.. -.....+++.|.+.|++.+++-
T Consensus 71 iD~v~v~~p-------------~~~v~~~v~~~~~~g~k~i~~q 101 (136)
T d1iuka_ 71 VDILDVFRP-------------PSALMDHLPEVLALRPGLVWLQ 101 (136)
T ss_dssp CSEEEECSC-------------HHHHTTTHHHHHHHCCSCEEEC
T ss_pred CceEEEecc-------------HHHHHHHHHHHHhhCCCeEEEe
Confidence 888887643 2334456777778888766543
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=92.39 E-value=0.039 Score=44.40 Aligned_cols=39 Identities=31% Similarity=0.377 Sum_probs=33.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
+.++++|+|.|+ |+.+++++..|.+.| +|+++.|+.++.
T Consensus 15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka 53 (177)
T d1nvta1 15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKA 53 (177)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHH
Confidence 467899999998 889999999998777 899999987764
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=92.33 E-value=0.19 Score=41.15 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=27.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREK 119 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~ 119 (405)
|||+|.|. +..|..+++.|++.|++|.++.-.+
T Consensus 1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~ 33 (203)
T d2blna2 1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHT 33 (203)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 68888865 6689999999999999998766433
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=92.13 E-value=0.073 Score=42.42 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
+++|+|.|| |++|-.++..|.+.|.+|.++.+.+.
T Consensus 3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~ 37 (185)
T d1q1ra1 3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA 37 (185)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence 578999998 99999999999999988777766554
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.12 E-value=0.11 Score=41.36 Aligned_cols=111 Identities=7% Similarity=0.028 Sum_probs=57.8
Q ss_pred CeEEEEcC-CChhHHHHHHHHHhCC----CeEEEEecCCCCcCCCCchh--HhhhccCCcEEEEcCCCCHHHHHHHHHhh
Q 043385 86 INILVVGS-TGYIGKFVVEELVSRG----FNVIAIAREKSGIRGRNDKE--ETLNQLQGASVCFSDVTNLESLEKSLENL 158 (405)
Q Consensus 86 ~~vlVtGa-tG~iG~~l~~~L~~~g----~~V~~l~r~~~~~~~~~~~~--~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~ 158 (405)
+||.|.|| +.+.+..++..+.... -+++.++.+++......-.. .......+..+.....+| ..+++++
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td---~~~al~g- 77 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLD---RRRALDG- 77 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESC---HHHHHTT-
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCC---chhhcCC-
Confidence 68999997 3344455555444432 38999998875421100000 000001122222222333 3566777
Q ss_pred CCCccEEEEcccccCC-CCcc----------------------hhHhHHHHHHHHHHHHHhcCCCEEE
Q 043385 159 GTSIDVVVSCLASRSG-GVKD----------------------SWKIDYEANRNSLVAGRNCGASHFV 203 (405)
Q Consensus 159 ~~~~d~Vv~~a~~~~~-~~~~----------------------~~~~n~~g~~~ll~aa~~~~v~~~V 203 (405)
.|+||..++.... .+.. ....|+.-.+.+++.+++...+-++
T Consensus 78 ---aDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~ 142 (169)
T d1s6ya1 78 ---ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWL 142 (169)
T ss_dssp ---CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred ---CCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEE
Confidence 9999999885421 0000 1124666677777777777655443
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=92.11 E-value=0.058 Score=44.00 Aligned_cols=34 Identities=29% Similarity=0.311 Sum_probs=28.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
|+|.|.| .|++|..++..| ++|++|++++.++..
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~ 34 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSK 34 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHH
Confidence 7899997 599999998755 579999999988754
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.73 E-value=0.041 Score=52.43 Aligned_cols=107 Identities=14% Similarity=0.089 Sum_probs=63.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCCCcCC-------------CCch---hHhhhc-cCC--cEEEEc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKSGIRG-------------RNDK---EETLNQ-LQG--ASVCFS 143 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~~~~~-------------~~~~---~~~~~~-~~~--v~~~~~ 143 (405)
...+|+|.|+ |.+|..+++-|+..| -.+++++.+.-.... ..+. .+.+.. .+. ++++..
T Consensus 24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~ 102 (529)
T d1yova1 24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE 102 (529)
T ss_dssp HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcC
Confidence 3468999998 889999999999999 478888764322100 0000 011111 123 333333
Q ss_pred CCCCHHHHH----HHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcccccc
Q 043385 144 DVTNLESLE----KSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSAICVQ 211 (405)
Q Consensus 144 Dl~d~~~l~----~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss~~~~ 211 (405)
+ ++.+. ..+++ +|+||.+.. |......+-+.|++.++ .+|+..+.+.+
T Consensus 103 ~---~~~~~~~~~~~~~~----~dvVv~~~~------------~~~~~~~l~~~c~~~~i-p~i~~~~~G~~ 154 (529)
T d1yova1 103 S---PENLLDNDPSFFCR----FTVVVATQL------------PESTSLRLADVLWNSQI-PLLICRTYGLV 154 (529)
T ss_dssp C---HHHHHHSCGGGGGG----CSEEEEESC------------CHHHHHHHHHHHHHHTC-CEEEEEEETTE
T ss_pred C---chhhhhhHHHHhcC----CCEEEECCC------------CHHHHHHHHHHHHHcCC-CEEEEeccCCE
Confidence 3 22221 23444 899997532 34455567788888887 47777776653
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=91.67 E-value=0.39 Score=41.41 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=32.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE 118 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~ 118 (405)
.++++++|+|-|- |.+|+++++.|.+.|.+|++++-.
T Consensus 32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~ 68 (293)
T d1hwxa1 32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGES 68 (293)
T ss_dssp SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3578899999998 999999999999999999988754
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.31 E-value=0.067 Score=46.18 Aligned_cols=34 Identities=18% Similarity=0.419 Sum_probs=31.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
.+|+|.|| |-.|..++..|.+.|++|+++.|.++
T Consensus 3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 3 TQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 36999999 89999999999999999999998763
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=91.21 E-value=0.1 Score=42.36 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=29.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKS 120 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~ 120 (405)
|||+|.|| |++|-.++..|.+.+ .+|+++.|.+.
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~~ 36 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCCc
Confidence 78999999 999999999998864 67988887653
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=91.19 E-value=0.089 Score=45.12 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=29.6
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
|+|.|| |..|..++.+|+++|++|+++.+...
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~~ 37 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFDP 37 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 889999 99999999999999999999998653
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.12 E-value=0.094 Score=43.39 Aligned_cols=32 Identities=22% Similarity=0.404 Sum_probs=29.6
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
|+|+|| |.-|...|..|+++|++|.++.+++.
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~~ 39 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQDH 39 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 889997 99999999999999999999999763
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=91.10 E-value=1.9 Score=34.53 Aligned_cols=98 Identities=15% Similarity=0.229 Sum_probs=57.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccC-CcEEEEcC-C-------CC--------
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQ-GASVCFSD-V-------TN-------- 147 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~-~v~~~~~D-l-------~d-------- 147 (405)
+||.|.|- |+-|..++..|.+.|. .|-.+.-+.+. +.+...+ ..++..+. + .|
T Consensus 1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~--------~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa 71 (194)
T d1w5fa1 1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDL--------QVLEASNADVKIQIGENITRGLGAGGRPEIGEQAA 71 (194)
T ss_dssp CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCH--------HHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHH
T ss_pred CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCH--------HHHhcCCcceEEecccccCCCcccccCchhhHhHH
Confidence 47888888 8999999999999873 24333333221 2222211 22222221 1 12
Q ss_pred ---HHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEE
Q 043385 148 ---LESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFV 203 (405)
Q Consensus 148 ---~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V 203 (405)
.+.+.+.+++ .|.||-+||.-.. +---++-.+.+.|++.++-.+-
T Consensus 72 ~e~~~~I~~~l~~----~d~vfi~AGlGGg-------TGtgaapviA~~ake~g~lvv~ 119 (194)
T d1w5fa1 72 LESEEKIREVLQD----THMVFITAGFGGG-------TGTGASPVIAKIAKEMGILTVA 119 (194)
T ss_dssp HHTHHHHHHHTTT----CSEEEEEEETTSS-------HHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhcC----CCeEEEEEecCCC-------cccchHHHHHHHHHHcCCceEE
Confidence 2345555555 9999999886542 2333466688889998864333
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=91.03 E-value=0.21 Score=36.83 Aligned_cols=37 Identities=19% Similarity=0.195 Sum_probs=29.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHh---CCCeEEEEecCCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVS---RGFNVIAIAREKSGI 122 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~ 122 (405)
+++++|.|| |++|..++..|.+ +|.+|+++.|.+.-+
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~iL 59 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMIL 59 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchhh
Confidence 478999999 9999999965554 467899999876543
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.00 E-value=0.14 Score=43.45 Aligned_cols=34 Identities=26% Similarity=0.335 Sum_probs=30.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEecCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG-FNVIAIAREKS 120 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r~~~ 120 (405)
++|+|.|| |..|..++..|.+.| ++|+++.|.+.
T Consensus 2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 68999999 999999999999999 58999998765
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=90.94 E-value=0.75 Score=36.25 Aligned_cols=32 Identities=22% Similarity=0.466 Sum_probs=25.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEec
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRG-FNVIAIAR 117 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r 117 (405)
|++|.|-| -|-||+.+++.|..++ .+|+++.-
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd 33 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK 33 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence 46899998 4999999999998876 56666553
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.81 E-value=0.14 Score=44.51 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK 119 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~ 119 (405)
+..+|+|+|| |.-|...+..|.++|++|+++-.+.
T Consensus 4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3467999999 9999999999999999999997654
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=90.81 E-value=0.11 Score=40.30 Aligned_cols=35 Identities=26% Similarity=0.490 Sum_probs=29.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR--GFNVIAIAREK 119 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~ 119 (405)
+++|.|.|+||-||....+-+.+. .++|.+++-+.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 479999999999999999888775 47888887653
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=90.72 E-value=0.095 Score=45.76 Aligned_cols=34 Identities=26% Similarity=0.486 Sum_probs=30.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
..|+|.|| |.-|..+|+.|+++|++|.++.++..
T Consensus 2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 46899999 99999999999999999999998754
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=90.63 E-value=0.1 Score=45.24 Aligned_cols=32 Identities=31% Similarity=0.767 Sum_probs=29.2
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGF-NVIAIAREK 119 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~ 119 (405)
+|+|.|| |-+|..++.+|+++|. +|++++|+.
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 6999999 9999999999999995 799999875
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=90.50 E-value=0.13 Score=39.86 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=29.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEecCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSR--GFNVIAIAREK 119 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~l~r~~ 119 (405)
|++|.|.|+||-||....+-+.+. .++|.+++-+.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK 37 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 468999999999999999988776 47888887543
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=90.40 E-value=0.15 Score=45.05 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEecCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRG--FNVIAIAREKS 120 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~l~r~~~ 120 (405)
.+|+|+|+|| |.-|...+..|+++| ++|+++.|+..
T Consensus 3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 3578999999 999999999999886 69999999864
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=90.30 E-value=0.021 Score=47.90 Aligned_cols=26 Identities=27% Similarity=0.428 Sum_probs=23.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeE
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNV 112 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V 112 (405)
|+|+|.|| |-+|..+|.+|+++|++|
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence 68999999 999999999999999753
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=90.14 E-value=0.23 Score=38.51 Aligned_cols=36 Identities=14% Similarity=0.309 Sum_probs=29.9
Q ss_pred CCeEEEE-cCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 85 DINILVV-GSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 85 ~~~vlVt-GatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
++.|+|. .+.|++|..++..|.+.|++|+++.+.+.
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 4566665 34599999999999999999999999764
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=90.10 E-value=0.34 Score=35.50 Aligned_cols=38 Identities=26% Similarity=0.218 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHh---CCCeEEEEecCCCCc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVS---RGFNVIAIAREKSGI 122 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~l~r~~~~~ 122 (405)
.+++++|.|| |++|-.++..|.+ .|.+|+++.|.+.-+
T Consensus 17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~il 57 (117)
T d1feca2 17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMIL 57 (117)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred cCCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccccc
Confidence 3478999999 9999999976554 488999999987543
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=90.06 E-value=0.088 Score=41.57 Aligned_cols=76 Identities=17% Similarity=0.097 Sum_probs=43.8
Q ss_pred CeEEEEcCCChhHHHHHHH-HHhC-----CCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 86 INILVVGSTGYIGKFVVEE-LVSR-----GFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~-L~~~-----g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
|||.|.|| |.+|...+-. |+.. +.++++++.++++............. ........ ++ ..+++++
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~-~~~~~~~t--~~---~~~~l~~-- 71 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVK-DRFKVLIS--DT---FEGAVVD-- 71 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHT-TSSEEEEC--SS---HHHHHTT--
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhc-cCceEEEe--cC---cccccCC--
Confidence 68999999 5577666532 3321 35899999987764321111111111 22333221 12 3467777
Q ss_pred CCccEEEEccccc
Q 043385 160 TSIDVVVSCLASR 172 (405)
Q Consensus 160 ~~~d~Vv~~a~~~ 172 (405)
+|+||..++..
T Consensus 72 --aDvVVita~~~ 82 (162)
T d1up7a1 72 --AKYVIFQFRPG 82 (162)
T ss_dssp --CSEEEECCCTT
T ss_pred --CCEEEEecccC
Confidence 99999988854
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=89.86 E-value=0.16 Score=39.65 Aligned_cols=32 Identities=25% Similarity=0.455 Sum_probs=27.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
||+|.|| |++|..++..|. ++.+|+++.|.+.
T Consensus 2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~~ 33 (167)
T d1xhca1 2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEPV 33 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSSS
T ss_pred eEEEECC-cHHHHHHHHHHH-cCCCEEEEecccc
Confidence 7899999 999999999885 4789999987653
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=89.61 E-value=0.17 Score=44.14 Aligned_cols=35 Identities=29% Similarity=0.548 Sum_probs=31.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
.-.|+|+|| |..|...+..|.++|.+|+++.+.++
T Consensus 7 ~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 7 EVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 356999999 99999999999999999999998764
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=89.45 E-value=2.8 Score=33.93 Aligned_cols=102 Identities=16% Similarity=0.241 Sum_probs=60.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccC-CcEEEEcCC-----------------
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQ-GASVCFSDV----------------- 145 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~-~v~~~~~Dl----------------- 145 (405)
..+|.|.|- |+-|..++..|.+.|. .|..+.-+.+. +.+...+ ...+..+.-
T Consensus 15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~--------~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~a 85 (209)
T d2vapa1 15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDA--------QQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEA 85 (209)
T ss_dssp CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBH--------HHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHH
T ss_pred CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCH--------HHHhcCCcchhcccccccccccccccchHHHHHH
Confidence 468999998 8999999999999874 24444333321 1222221 122222211
Q ss_pred --CCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 146 --TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 146 --~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
.+.+.+.+.+++ .|.||-+||.-.. +---++--+.+.+++.++..+-+++
T Consensus 86 a~e~~~~I~~~l~~----~d~vfi~AGlGGG-------TGsgaapvia~~ake~g~lvv~ivt 137 (209)
T d2vapa1 86 AKESAEEIKAAIQD----SDMVFITCGLGGG-------TGTGSAPVVAEISKKIGALTVAVVT 137 (209)
T ss_dssp HHHTHHHHHHHHTT----CSEEEEEEETTSS-------HHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHhccC----CCEEEEEEeCCCC-------ccccHHHHHHHHHHHcCCcEEEEEe
Confidence 123456667776 9999999987542 2233455678889998864444333
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=89.18 E-value=0.24 Score=41.68 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=32.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIARE 118 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~ 118 (405)
++++++|+|-|- |.+|+++++.|.+.|.+|++++-.
T Consensus 28 ~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 28 GIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence 578899999986 999999999999999999887753
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=89.10 E-value=0.11 Score=41.58 Aligned_cols=33 Identities=21% Similarity=0.353 Sum_probs=27.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREK 119 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~ 119 (405)
.+|+|.|| |++|-.++..|.+.|.+|.++.+.+
T Consensus 4 a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~~~ 36 (183)
T d1d7ya1 4 APVVVLGA-GLASVSFVAELRQAGYQGLITVVGD 36 (183)
T ss_dssp SSEEEECC-SHHHHHHHHHHHHHTCCSCEEEEES
T ss_pred CCEEEECc-cHHHHHHHHHHHhcCCceEEEEEec
Confidence 46999998 9999999999999997766655543
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.85 E-value=0.22 Score=37.80 Aligned_cols=37 Identities=27% Similarity=0.438 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHh----CCCeEEEEecCCCCc
Q 043385 85 DINILVVGSTGYIGKFVVEELVS----RGFNVIAIAREKSGI 122 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~----~g~~V~~l~r~~~~~ 122 (405)
.++|+|.|| |++|..++..|.+ .|.+|+.+.+.+...
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~l 77 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKGNM 77 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccccCC
Confidence 468999998 9999999998863 489999999877544
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.85 E-value=0.78 Score=37.21 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=27.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
|||++.|. +..|..+.+.|.++|++|.++.-.++
T Consensus 1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~t~p~ 34 (203)
T d2bw0a2 1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVFTVPD 34 (203)
T ss_dssp CEEEEECC-HHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEEcCCC
Confidence 68888876 67899999999999999987665443
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=88.84 E-value=0.16 Score=40.19 Aligned_cols=78 Identities=12% Similarity=0.136 Sum_probs=45.3
Q ss_pred CCeEEEEcCCChhHHH-HHHHHHhC-----CCeEEEEecCCCCcCCCCchhHhhhc--cCCcEEEEcCCCCHHHHHHHHH
Q 043385 85 DINILVVGSTGYIGKF-VVEELVSR-----GFNVIAIAREKSGIRGRNDKEETLNQ--LQGASVCFSDVTNLESLEKSLE 156 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~-l~~~L~~~-----g~~V~~l~r~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~ 156 (405)
..||.|.|| |.+|.. ++..|+.. +.+|++++.+++++.......+.... ....++... .+..++++
T Consensus 3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~eal~ 76 (167)
T d1u8xx1 3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT-----TDPEEAFT 76 (167)
T ss_dssp CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE-----SCHHHHHS
T ss_pred CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec-----CChhhccC
Confidence 458999998 556654 44455543 24899999988765322221111111 123333332 12567788
Q ss_pred hhCCCccEEEEccccc
Q 043385 157 NLGTSIDVVVSCLASR 172 (405)
Q Consensus 157 ~~~~~~d~Vv~~a~~~ 172 (405)
+ +|+||..++..
T Consensus 77 ~----AD~Vvitag~~ 88 (167)
T d1u8xx1 77 D----VDFVMAHIRVG 88 (167)
T ss_dssp S----CSEEEECCCTT
T ss_pred C----CCEEEECCCcC
Confidence 8 99999998864
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=88.84 E-value=0.51 Score=37.45 Aligned_cols=71 Identities=27% Similarity=0.429 Sum_probs=40.1
Q ss_pred CCCeEEEEcCCChhHHH-HHHHHHhCC--CeEEEE-ecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhC
Q 043385 84 KDINILVVGSTGYIGKF-VVEELVSRG--FNVIAI-AREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLG 159 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~-l~~~L~~~g--~~V~~l-~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~ 159 (405)
++.+|.|.|+ |.+|+. .++.|.+.+ .+|+++ ++++++. +.+...-+...+.. +++++++.
T Consensus 2 kkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~-------~~~~~~~~~~~~~~------~~~ell~~-- 65 (181)
T d1zh8a1 2 RKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHA-------EEFAKMVGNPAVFD------SYEELLES-- 65 (181)
T ss_dssp CCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHH-------HHHHHHHSSCEEES------CHHHHHHS--
T ss_pred CCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhh-------hhhhccccccceee------eeeccccc--
Confidence 4568999996 999986 467776643 466654 5554432 11111112222222 35566665
Q ss_pred CCccEEEEccc
Q 043385 160 TSIDVVVSCLA 170 (405)
Q Consensus 160 ~~~d~Vv~~a~ 170 (405)
.++|+|+-+..
T Consensus 66 ~~id~v~I~tp 76 (181)
T d1zh8a1 66 GLVDAVDLTLP 76 (181)
T ss_dssp SCCSEEEECCC
T ss_pred cccceeecccc
Confidence 45999986543
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=88.47 E-value=0.3 Score=39.01 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=26.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEE-ecCCCC
Q 043385 86 INILVVGSTGYIGKFVVEELVSR-GFNVIAI-AREKSG 121 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l-~r~~~~ 121 (405)
++|.|.|+ |.+|+..++.|... +.+|+++ ++++++
T Consensus 2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~ 38 (184)
T d1ydwa1 2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEK 38 (184)
T ss_dssp EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHH
T ss_pred eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccc
Confidence 58999996 89999999999876 5677754 565543
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=88.34 E-value=0.21 Score=41.47 Aligned_cols=33 Identities=21% Similarity=0.480 Sum_probs=29.6
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKS 120 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~ 120 (405)
+|+|+|| |.-|...+..|.++|+ +|+++.+++.
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~ 35 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATDH 35 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 6999999 9999999999999995 7999998653
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=87.95 E-value=0.21 Score=39.21 Aligned_cols=35 Identities=17% Similarity=0.288 Sum_probs=25.1
Q ss_pred CeEEEEcCCChhHHH-HHHHHHhC-CCeEEEEecCCCC
Q 043385 86 INILVVGSTGYIGKF-VVEELVSR-GFNVIAIAREKSG 121 (405)
Q Consensus 86 ~~vlVtGatG~iG~~-l~~~L~~~-g~~V~~l~r~~~~ 121 (405)
++|.|.|+ |.+|+. .+..|.+. +.++++++++++.
T Consensus 2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~ 38 (167)
T d1xeaa1 2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKV 38 (167)
T ss_dssp EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHH
T ss_pred eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHH
Confidence 68999997 888965 55666655 4577777776654
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=87.76 E-value=0.38 Score=37.88 Aligned_cols=26 Identities=27% Similarity=0.487 Sum_probs=20.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSR 108 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~ 108 (405)
+...++|.|.|. |.+|+..++.|.+.
T Consensus 4 ~~~k~kv~iIG~-G~~g~~h~~~l~~~ 29 (172)
T d1lc0a1 4 NSGKFGVVVVGV-GRAGSVRLRDLKDP 29 (172)
T ss_dssp CCCSEEEEEECC-SHHHHHHHHHHTSH
T ss_pred CCCCcEEEEEcC-CHHHHHHHHHHHhC
Confidence 344578999997 99999988887764
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=87.43 E-value=0.22 Score=36.05 Aligned_cols=38 Identities=18% Similarity=0.043 Sum_probs=31.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
+.++|+|+|.|+ |.-|.-++..|++.+.+|+.+.|+..
T Consensus 29 ~f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 29 LFVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GGTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred hcCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 367899999999 89999999999988877776666654
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=87.14 E-value=0.27 Score=41.65 Aligned_cols=36 Identities=11% Similarity=0.184 Sum_probs=31.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 043385 81 KNPKDINILVVGSTGYIGKFVVEELVSRGFNVIAIAR 117 (405)
Q Consensus 81 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r 117 (405)
.++++++|+|-|- |.+|+++++.|.+.|.+|++++-
T Consensus 32 ~~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 32 DTLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp CCSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence 3578899999996 99999999999999999988764
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.54 E-value=0.31 Score=42.51 Aligned_cols=31 Identities=29% Similarity=0.524 Sum_probs=28.8
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIAREK 119 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~ 119 (405)
|+|+|| |.-|...+..|.++|++|+++.++.
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 788999 9999999999999999999999765
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=86.37 E-value=0.94 Score=34.87 Aligned_cols=36 Identities=17% Similarity=0.155 Sum_probs=29.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKS 120 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~ 120 (405)
.+++|+|.|| |.+|.-.+..+++.|. .|+++.|...
T Consensus 44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~~ 80 (153)
T d1gtea3 44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKGF 80 (153)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence 3568999998 9999999999999986 5778877653
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=85.47 E-value=0.4 Score=39.90 Aligned_cols=33 Identities=21% Similarity=0.446 Sum_probs=30.1
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
-|+|.|| |-.|...+..|.++|++|.++.+.+.
T Consensus 4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3899999 99999999999999999999998764
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.35 E-value=7.5 Score=30.90 Aligned_cols=100 Identities=21% Similarity=0.225 Sum_probs=58.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEecCCCCcCCCCchhHhhhccC-CcEEEEc-----------C--------C
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGF-NVIAIAREKSGIRGRNDKEETLNQLQ-GASVCFS-----------D--------V 145 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~~-~v~~~~~-----------D--------l 145 (405)
+|-|.|- |+-|..++.+|.+.|. .|..+.-+.+. +.+...+ ..++..+ | .
T Consensus 3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~--------~~L~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~ 73 (198)
T d1rq2a1 3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDA--------QALLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAE 73 (198)
T ss_dssp CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCH--------HHHHHCCCSEEEECCTTTC-----CCCHHHHHHHHH
T ss_pred eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchH--------HHHhcCCcchhhccccccccCCCcCcChhhhHhhHH
Confidence 3556666 7789999999999974 34444443322 1222211 2222222 1 1
Q ss_pred CCHHHHHHHHHhhCCCccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 146 TNLESLEKSLENLGTSIDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 146 ~d~~~l~~~~~~~~~~~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
.+.+.+.+.+++ .|.||-+||.-.. +-.-++--+.+.|++.|+-.+-+++
T Consensus 74 e~~~~I~~~l~~----~d~vfi~AGlGGg-------TGtGaaPviA~iake~g~l~v~ivt 123 (198)
T d1rq2a1 74 DAKDEIEELLRG----ADMVFVTAGEGGG-------TGTGGAPVVASIARKLGALTVGVVT 123 (198)
T ss_dssp HTHHHHHHHHTT----CSEEEEEEETTSS-------HHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHhcC----CCEEEEEEecCCC-------CCcchHHHHHHHHHHcCCcEEEEEe
Confidence 234556777776 9999999887542 2233455688889998864444333
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=84.77 E-value=2.8 Score=33.69 Aligned_cols=34 Identities=21% Similarity=0.408 Sum_probs=27.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCC
Q 043385 85 DINILVVGSTGYIGKFVVEELVSRGFNVIAIAREK 119 (405)
Q Consensus 85 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~ 119 (405)
.|||++.|. +..+..+.+.|++.|++|.++.-.+
T Consensus 3 ~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~~ 36 (206)
T d1fmta2 3 SLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQP 36 (206)
T ss_dssp CCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 478999975 7889999999999999987766443
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=84.51 E-value=1.2 Score=34.96 Aligned_cols=31 Identities=35% Similarity=0.482 Sum_probs=26.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 043385 86 INILVVGSTGYIGKFVVEELVSRGFNVIAIAR 117 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r 117 (405)
|+|.|-|= |-||+.+.+.|..++.+|+++.-
T Consensus 1 ikigINGf-GRIGR~~~R~l~~~~i~iv~INd 31 (168)
T d2g82a1 1 MKVGINGF-GRIGRQVFRILHSRGVEVALIND 31 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEECC-cHHHHHHHHHHhcCCCEEEEECC
Confidence 57888887 99999999999999988877763
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=84.49 E-value=0.55 Score=41.12 Aligned_cols=118 Identities=19% Similarity=0.175 Sum_probs=61.9
Q ss_pred CCCCeEE-EEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCC
Q 043385 83 PKDINIL-VVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTS 161 (405)
Q Consensus 83 ~~~~~vl-VtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~ 161 (405)
.++++|| +..++|..+.+++ ..+.+|++++.++......... .......+++++.+|..|.. +.+....++
T Consensus 144 ~~g~rVLDl~~gtG~~s~~~a----~g~~~V~~vD~s~~al~~a~~n-~~~ngl~~~~~i~~d~~~~~---~~~~~~~~~ 215 (318)
T d1wxxa2 144 FRGERALDVFSYAGGFALHLA----LGFREVVAVDSSAEALRRAEEN-ARLNGLGNVRVLEANAFDLL---RRLEKEGER 215 (318)
T ss_dssp CCEEEEEEETCTTTHHHHHHH----HHEEEEEEEESCHHHHHHHHHH-HHHTTCTTEEEEESCHHHHH---HHHHHTTCC
T ss_pred hCCCeeeccCCCCcHHHHHHH----hcCCcEEeecchHHHHHHHHHH-HHHcCCCCcceeeccHHHHh---hhhHhhhcC
Confidence 4567888 4556676665443 3457899999987654322111 12233457889999875532 222211146
Q ss_pred ccEEEEcccccCCCCcchhHhHHHHHHHHHHHHHhc-CCCEEEEEcccc
Q 043385 162 IDVVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNC-GASHFVLLSAIC 209 (405)
Q Consensus 162 ~d~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~-~v~~~V~~Ss~~ 209 (405)
+|+||.............. ........++..+.+. ..+-++..+|.+
T Consensus 216 fD~Vi~DpP~~~~~~~~~~-~~~~~~~~l~~~a~~lLkpGG~Lv~~scs 263 (318)
T d1wxxa2 216 FDLVVLDPPAFAKGKKDVE-RAYRAYKEVNLRAIKLLKEGGILATASCS 263 (318)
T ss_dssp EEEEEECCCCSCCSTTSHH-HHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCEEEEcCCccccchHHHH-HHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9999987654433222221 1223344455555432 222244444443
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=84.11 E-value=0.48 Score=42.64 Aligned_cols=33 Identities=24% Similarity=0.465 Sum_probs=25.7
Q ss_pred CeEEEEcC------CChhH---HHHHHHHHhCCCeEEEEecC
Q 043385 86 INILVVGS------TGYIG---KFVVEELVSRGFNVIAIARE 118 (405)
Q Consensus 86 ~~vlVtGa------tG~iG---~~l~~~L~~~g~~V~~l~r~ 118 (405)
||||+++. +|++| ..|+++|.++||+|++++..
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~ 42 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS 42 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 67787664 46676 56689999999999999843
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.00 E-value=2.2 Score=36.55 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=28.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
+.+=--.||..|.+|+++|+.+|++|+.+.+...
T Consensus 38 R~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~s 71 (290)
T d1p9oa_ 38 RFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 71 (290)
T ss_dssp EEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred eEeCCCCchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 4444567899999999999999999999987643
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=83.55 E-value=3.8 Score=31.75 Aligned_cols=31 Identities=29% Similarity=0.513 Sum_probs=24.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEec
Q 043385 86 INILVVGSTGYIGKFVVEELVSRG-FNVIAIAR 117 (405)
Q Consensus 86 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~l~r 117 (405)
++|.|-|= |-||+.+.+.++++. .+|+++.-
T Consensus 2 ikigINGF-GRIGR~v~R~~~~~~~i~ivaINd 33 (166)
T d1gado1 2 IKVGINGF-GRIGRIVFRAAQKRSDIEIVAIND 33 (166)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred eEEEEECC-cHHHHHHHHHHhhCCCeEEEEEeC
Confidence 57899885 999999999999885 56666553
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=82.83 E-value=0.53 Score=41.69 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=28.0
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEecC
Q 043385 88 ILVVGSTGYIGKFVVEELVSRGFNVIAIARE 118 (405)
Q Consensus 88 vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~ 118 (405)
|+|+|+ |+-|..+|.+|.++|++|.+|-+.
T Consensus 5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence 788888 999999999999999999999985
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=82.77 E-value=0.067 Score=41.61 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=21.4
Q ss_pred EEcCCChhHHHHHHHHHhCCCeEEEEecCCCCc
Q 043385 90 VVGSTGYIGKFVVEELVSRGFNVIAIAREKSGI 122 (405)
Q Consensus 90 VtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~ 122 (405)
+.|+ |.+|+++++.|.+.++.+.+.+|++++.
T Consensus 4 fIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~ 35 (153)
T d2i76a2 4 FVGT-GTLTRFFLECLKDRYEIGYILSRSIDRA 35 (153)
T ss_dssp EESC-CHHHHHHHHTTC----CCCEECSSHHHH
T ss_pred EEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhh
Confidence 4455 9999999998866444446788887654
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=82.74 E-value=0.53 Score=41.11 Aligned_cols=34 Identities=24% Similarity=0.429 Sum_probs=29.7
Q ss_pred eEEEEcCCChhHHHHHHHHH-----hCCCeEEEEecCCCC
Q 043385 87 NILVVGSTGYIGKFVVEELV-----SRGFNVIAIAREKSG 121 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~-----~~g~~V~~l~r~~~~ 121 (405)
-|+|.|| |-.|..++..|+ ++|++|+++.|.+..
T Consensus 9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~ 47 (360)
T d1pn0a1 9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 47 (360)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCC
Confidence 4899999 999999999996 469999999987654
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=82.31 E-value=4.9 Score=29.05 Aligned_cols=37 Identities=22% Similarity=0.367 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
+..+|+|-|-||..|+.-+++.++-|-+|++-+....
T Consensus 5 k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgk 41 (119)
T d2nu7a1 5 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGK 41 (119)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTC
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCC
Confidence 3468999999999999999999999999887776544
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=81.98 E-value=0.27 Score=43.91 Aligned_cols=101 Identities=11% Similarity=0.088 Sum_probs=61.5
Q ss_pred CeEE-EEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCccE
Q 043385 86 INIL-VVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSIDV 164 (405)
Q Consensus 86 ~~vl-VtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d~ 164 (405)
.+|+ +.+|+|.+|..|+ +++.+|+++.-+++........ .......+++++.+|..+.-....... ..+|+
T Consensus 214 ~~vlDLycG~G~fsl~La----~~~~~V~gvE~~~~ai~~A~~n-a~~n~i~n~~~~~~~~~~~~~~~~~~~---~~~d~ 285 (358)
T d1uwva2 214 DRVLDLFCGMGNFTLPLA----TQAASVVGVEGVPALVEKGQQN-ARLNGLQNVTFYHENLEEDVTKQPWAK---NGFDK 285 (358)
T ss_dssp CEEEEESCTTTTTHHHHH----TTSSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCTTSCCSSSGGGT---TCCSE
T ss_pred ceEEEecccccccchhcc----ccccEEEeccCcHHHHHHHHHh-HHhcccccceeeecchhhhhhhhhhhh---ccCce
Confidence 4454 6799999998764 5678999999877644321111 223445688999999866321111111 24899
Q ss_pred EEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEcc
Q 043385 165 VVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLSA 207 (405)
Q Consensus 165 Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~Ss 207 (405)
||-.- .. .|...+++...+.+.++|||+|-
T Consensus 286 vilDP--PR-----------~G~~~~~~~l~~~~~~~ivYVSC 315 (358)
T d1uwva2 286 VLLDP--AR-----------AGAAGVMQQIIKLEPIRIVYVSC 315 (358)
T ss_dssp EEECC--CT-----------TCCHHHHHHHHHHCCSEEEEEES
T ss_pred EEeCC--CC-----------ccHHHHHHHHHHcCCCEEEEEeC
Confidence 88531 11 12223566666678899999993
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=81.49 E-value=3 Score=32.44 Aligned_cols=30 Identities=30% Similarity=0.515 Sum_probs=25.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEec
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAR 117 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r 117 (405)
||.|-|= |-||+.+.+.+++++.+|+++.-
T Consensus 2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd 31 (169)
T d1dssg1 2 KIGINGF-GRIGRLVLRAALEMGAQVVAVND 31 (169)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCCEEEEEC
T ss_pred eEEEECC-cHHHHHHHHHHHhCCCcEEEECC
Confidence 6788884 99999999999999888777654
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=81.33 E-value=0.67 Score=39.86 Aligned_cols=33 Identities=33% Similarity=0.423 Sum_probs=30.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKS 120 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~ 120 (405)
-|+|+|| |..|...+..|+++|.+|+++.+.+.
T Consensus 18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~~ 50 (308)
T d1y0pa2 18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEPV 50 (308)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 3899999 99999999999999999999998653
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=81.13 E-value=7.1 Score=28.25 Aligned_cols=91 Identities=21% Similarity=0.407 Sum_probs=57.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCCcCCCCchhHhhhccCCcEEEEcCCCCHHHHHHHHHhhCCCcc
Q 043385 84 KDINILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSGIRGRNDKEETLNQLQGASVCFSDVTNLESLEKSLENLGTSID 163 (405)
Q Consensus 84 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~~~d 163 (405)
+..+|+|-|-||..|+.-+++.++-|-+|++-+.....-. . ..++.+ .++++++.+. .++|
T Consensus 6 k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~-------~---~~giPV-------f~tV~eAv~~--~~~d 66 (121)
T d1oi7a1 6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM-------E---VLGVPV-------YDTVKEAVAH--HEVD 66 (121)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC-------E---ETTEEE-------ESSHHHHHHH--SCCS
T ss_pred CCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCc-------E---EECCch-------HhhHHHHHHh--cCCe
Confidence 3458999999999999999999999999888776554321 0 112222 2456777766 3466
Q ss_pred EEEEcccccCCCCcchhHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 043385 164 VVVSCLASRSGGVKDSWKIDYEANRNSLVAGRNCGASHFVLLS 206 (405)
Q Consensus 164 ~Vv~~a~~~~~~~~~~~~~n~~g~~~ll~aa~~~~v~~~V~~S 206 (405)
+=+-...+. .....++||. ++|++.+|.++
T Consensus 67 ~SvIfVPp~------------~a~dAi~EAi-~agI~liv~IT 96 (121)
T d1oi7a1 67 ASIIFVPAP------------AAADAALEAA-HAGIPLIVLIT 96 (121)
T ss_dssp EEEECCCHH------------HHHHHHHHHH-HTTCSEEEECC
T ss_pred EEEEeeCHH------------HHHHHHHHHH-hCCCcEEEEec
Confidence 554433221 1223344444 56898777655
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=81.00 E-value=1.1 Score=37.30 Aligned_cols=36 Identities=22% Similarity=0.437 Sum_probs=30.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEecC
Q 043385 82 NPKDINILVVGSTGYIGKFVVEELVSR-GFNVIAIARE 118 (405)
Q Consensus 82 ~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~ 118 (405)
++++++|+|-|- |.+|.++++.|.++ |..|+++.-.
T Consensus 29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~ 65 (239)
T d1gtma1 29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS 65 (239)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence 468899999998 99999999999865 8888877643
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=80.50 E-value=1.8 Score=33.26 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=24.0
Q ss_pred CeEEEEcCCChhHHH-HHHHHHhC-CCeEEEE-ecCCCC
Q 043385 86 INILVVGSTGYIGKF-VVEELVSR-GFNVIAI-AREKSG 121 (405)
Q Consensus 86 ~~vlVtGatG~iG~~-l~~~L~~~-g~~V~~l-~r~~~~ 121 (405)
++|.|.|. |.+|+. .+..|.+. +.+|+++ ++++++
T Consensus 2 iri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~ 39 (164)
T d1tlta1 2 LRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAK 39 (164)
T ss_dssp EEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTT
T ss_pred CEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHh
Confidence 68999996 899975 45666654 5676654 566554
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=80.18 E-value=0.85 Score=38.04 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=30.8
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEecCCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSRGFNVIAIAREKSG 121 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~g~~V~~l~r~~~~ 121 (405)
.|+|+|| |--|...+..|.++|++|.++.+.+..
T Consensus 6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 4899999 999999999999999999999988653
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=80.03 E-value=0.86 Score=38.65 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=29.7
Q ss_pred eEEEEcCCChhHHHHHHHHHhC-CCeEEEEecCCC
Q 043385 87 NILVVGSTGYIGKFVVEELVSR-GFNVIAIAREKS 120 (405)
Q Consensus 87 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~l~r~~~ 120 (405)
-|+|+|| |.-|...+..|+++ |++|.++.+.+.
T Consensus 35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~ 68 (278)
T d1rp0a1 35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS 68 (278)
T ss_dssp EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence 4999999 99999999999875 999999998764
|