Citrus Sinensis ID: 043517
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 956 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LY77 | 1033 | Calcium-transporting ATPa | yes | no | 0.926 | 0.857 | 0.369 | 1e-156 | |
| Q9LIK7 | 1017 | Putative calcium-transpor | no | no | 0.932 | 0.876 | 0.361 | 1e-152 | |
| Q9SZR1 | 1069 | Calcium-transporting ATPa | no | no | 0.924 | 0.826 | 0.337 | 1e-140 | |
| Q9LF79 | 1074 | Calcium-transporting ATPa | no | no | 0.937 | 0.834 | 0.319 | 1e-136 | |
| Q9LU41 | 1086 | Calcium-transporting ATPa | no | no | 0.928 | 0.817 | 0.326 | 1e-135 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.916 | 0.854 | 0.299 | 1e-117 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.920 | 0.854 | 0.305 | 1e-116 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 0.913 | 0.840 | 0.304 | 1e-116 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.890 | 0.836 | 0.308 | 1e-116 | |
| Q6ATV4 | 1033 | Calcium-transporting ATPa | no | no | 0.912 | 0.844 | 0.304 | 1e-109 |
| >sp|Q9LY77|ACA12_ARATH Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 552 bits (1422), Expect = e-156, Method: Compositional matrix adjust.
Identities = 361/977 (36%), Positives = 542/977 (55%), Gaps = 91/977 (9%)
Query: 13 SIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLT 72
+I+QE + ++ + G ++ +AASL TN GI G E E+ RRR +FGSN
Sbjct: 87 AIDQEQLVEIMKGKDLPGIQALGGVEGVAASLRTNPTKGIHGNEQEVSRRRDLFGSNTY- 145
Query: 73 LSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFV 132
+ P L F + ++ KD T+++LL CA SL GIK +G ++G +G +FV
Sbjct: 146 -----HKPPPKGLLF--FVYEAFKDLTILILLVCAIFSLGFGIKEHGIKEGWYEGGSIFV 198
Query: 133 VISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQT 192
+ V+ +S+L F + + L + S V+V+RD R + I++ +VVVGDVV L+
Sbjct: 199 AVFLVIVVSALSNFRQERQFDKL--SKISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKI 256
Query: 193 GDQVPADGLFVHGKNLKLDDGD-----DKL-------PCIFTGAKVVGGECSMLVTSVGE 240
GDQ+PADGLF+ G +L++D+ D L P +F+G K+V G MLV SVG
Sbjct: 257 GDQIPADGLFLEGHSLQVDESSMTGESDHLEVDHKDNPFLFSGTKIVDGFAQMLVVSVGM 316
Query: 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAW 300
+T M IN+ + + LQ+ +D + S + KI L+++ LV+VV ++ F
Sbjct: 317 STTWGQTM------SSINQDSSERTPLQVRLDTLTSTIGKIGLTVAALVLVVLLVRYFTG 370
Query: 301 GDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGL 360
+ G ++ V ++ VV R V +V V+ LP+ +
Sbjct: 371 NTEKEGKREYNGSKTPVDTVVNSVV-------------RIVAAAVTIVVVAIPEGLPLAV 417
Query: 361 FICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFI 420
+ LAY+ K++ +A R L C ++G T ICT KT L+L+ + + W+ ++
Sbjct: 418 TLTLAYSMKRMMSDQAMVRKLSACETMGSATVICTDKTGTLTLNEMKVTKFWLGQESIHE 477
Query: 421 KST---SADVLDALREAIATTSYDEAAVDD------------DDALLLWAKEFLDVDGDK 465
ST S DVLD L + + V D + ALL W L +D +
Sbjct: 478 DSTKMISPDVLDLLYQGTGLNTTGSVCVSDSGSTPEFSGSPTEKALLSWTVLNLGMDMES 537
Query: 466 MKQN---CTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHG 522
+KQ VE F+ +K R+G+L++ DN+VH+HW+G+ E++L+MC+HY G
Sbjct: 538 VKQKHEVLRVETFSSAKKRSGVLVR-----RKSDNTVHVHWKGAAEMVLAMCSHYYTSTG 592
Query: 523 TLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVR 582
++ +D + I+ + A+ SLRCI+FA K + + ++E E GLT +G+V
Sbjct: 593 SVDLMDSTAKSRIQAIIQGMAAS--SLRCIAFAHKIA---SNDSVLE--EDGLTLMGIVG 645
Query: 583 LKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNG-YDA 641
LK V +A+E C+ AG+ IK+I D++ A+ IA G++ DH++ +
Sbjct: 646 LKDPCRPGVSKAVETCK-LAGVTIKMITGDNVFTAKAIAFECGIL------DHNDKDEED 698
Query: 642 AVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPS 701
AV+E FR+ ++E R VD +RVMA +SP DKLLMV+CL+ KG VVAVTG T DAP+
Sbjct: 699 AVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPA 758
Query: 702 LKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNA 761
LKEAD+G+S+G + + A++ SDIVILD+NF ++A LKWGRCV NNI+KFIQ LTVN
Sbjct: 759 LKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNV 818
Query: 762 AAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA--PVS-LRVQLPAHATAAAS 818
AA +N +AAI GE+PL QLLWVNLIMD LGALALA P + L + P T A
Sbjct: 819 AALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNELLKRKPVGRTEA-- 876
Query: 819 ASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVL 878
L +WRN+++Q LYQ+ VL Q KG + V+ D ++FN+FVLCQVF
Sbjct: 877 ---LITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEVKD--TLIFNTFVLCQVFNE 931
Query: 879 INAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIG 938
NARE+E N+F KGLH+N F+ I+ +L + ++E + R++ W CI
Sbjct: 932 FNAREMEKKNVF--KGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQWGTCIA 989
Query: 939 IAVMTLPTGLVAKCIPM 955
+A ++ P G K IP+
Sbjct: 990 LASLSWPIGFFTKFIPV 1006
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust.
Identities = 353/977 (36%), Positives = 543/977 (55%), Gaps = 86/977 (8%)
Query: 12 FSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGL 71
F I+ ET+ L +N + G + ++L++N +GI+ + E++RRR FGSN
Sbjct: 81 FKIDTETLNDLVKNKNQEKLESLGGPNGLVSALKSNTRLGINEEGDEIQRRRSTFGSNTY 140
Query: 72 TLSLENNCKHPAS--LHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAM 129
T + P+ HF + ++ KD T+++LL CATLSL GIK +G ++G DG
Sbjct: 141 T-------RQPSKGLFHF---VVEAFKDLTILILLGCATLSLGFGIKEHGLKEGWYDGGS 190
Query: 130 VFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVC 189
+FV + VV +S++ F +N + L + S + V+R+GR ++I++ ++VVGD+VC
Sbjct: 191 IFVAVFLVVAVSAVSNFRQNRQFDKL--SKVSSNIKIDVVRNGRRQEISIFDIVVGDIVC 248
Query: 190 LQTGDQVPADGLFVHGKNLKLDDGD-----DKLPC-------IFTGAKVVGGECSMLVTS 237
L GDQVPADG+FV G L +D+ D + +F+G K+ G M VTS
Sbjct: 249 LNIGDQVPADGVFVEGHLLHVDESSMTGESDHVEVSLTGNTFLFSGTKIADGFGKMAVTS 308
Query: 238 VGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGC 297
VG NT +M +S+D +++ LQ +D++ S + K+ L ++ LV++V ++
Sbjct: 309 VGMNTAWGQMMSHISRDTN------EQTPLQSRLDKLTSSIGKVGLLVAFLVLLVLLIRY 362
Query: 298 FAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLP 357
F D + ++T + + ++I+V +GL P
Sbjct: 363 FTGTTKDESGNREYNGKTTKSDEIV-----------NAVVKMVAAAVTIIVVAIPEGL-P 410
Query: 358 IGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDN 417
+ + + LAY+ K++ A R L C ++G T ICT KT L+L+ + + W ++
Sbjct: 411 LAVTLTLAYSMKRMMKDNAMVRKLSACETMGSATVICTDKTGTLTLNQMKVTDFWFGLES 470
Query: 418 SFIKSTSADVLDALREAIAT------------TSYDEAAVDDDDALLLWAKEFLDVDGDK 465
S S V++ + +A T Y+ + + A+L WA E L++ +K
Sbjct: 471 GKASSVSQRVVELFHQGVAMNTTGSVFKAKAGTEYEFSGSPTEKAILSWAVEELEMGMEK 530
Query: 466 MKQN---CTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHG 522
+ + VE FN K R+G+L+K G ++ N+V +HW+G+ E IL+MC+ + D G
Sbjct: 531 VIEEHDVVHVEGFNSEKKRSGVLMKKKGVNTE--NNV-VHWKGAAEKILAMCSTFCDGSG 587
Query: 523 TLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVR 582
++ + E + F I+ + A SLRCI+FA + N++ L E L+ LG++
Sbjct: 588 VVREMKEDDKIQFEKIIQSMAA--KSLRCIAFAYSEDNEDNKK----LKEEKLSLLGIIG 641
Query: 583 LKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAA 642
+K VK+A+EDC + AG+ IK+I D+I AR IA+ G IL P ED N A
Sbjct: 642 IKDPCRPGVKKAVEDC-QFAGVNIKMITGDNIFTARAIAVECG-ILTP--EDEMN--SEA 695
Query: 643 VIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSL 702
V+E FR+ ++E R V+ ++VMA +SP DKLLMV+CLK+ G VVAVTG T DAP+L
Sbjct: 696 VLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPAL 755
Query: 703 KEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAA 762
KEAD+G+S+G + + A++ SDIVILD+NF ++A LKWGRCV NNI+KFIQ LTVN A
Sbjct: 756 KEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVA 815
Query: 763 AFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA--PVS-LRVQLPAHATAAASA 819
A +N VAA+ G++PL QLLWVNLIMD LGALALA P + L + P A
Sbjct: 816 ALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMKKKPIGRVA---- 871
Query: 820 SPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLI 879
PL +WRN++ Q YQ+ VL Q +G + V + ++FN+FVLCQVF
Sbjct: 872 -PLITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNVTEKVKN--TLIFNTFVLCQVFNEF 928
Query: 880 NAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGI 939
NAR +E N+F KGLH+N F+ I+ +L + ++E + R++L W VCI I
Sbjct: 929 NARSLEKKNVF--KGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQWGVCIAI 986
Query: 940 AVMTLPTGLVAKCIPMP 956
A + P G + K +P+P
Sbjct: 987 AAASWPIGWLVKSVPVP 1003
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust.
Identities = 337/998 (33%), Positives = 539/998 (54%), Gaps = 114/998 (11%)
Query: 12 FSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGL 71
F I QE + ++ + + + G ++ ++ L+TNL+ GI G + ++ +R+ FGSN
Sbjct: 114 FGIGQEQIVSISRDQNIGALQELGGVRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSN-- 171
Query: 72 TLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDG-AMV 130
F R + ++ +D T+I+L+ A SL LGIK G E+G DG ++
Sbjct: 172 ------TYPQKKGRSFWRFVWEASQDLTLIILIVAAVASLALGIKTEGIEKGWYDGISIA 225
Query: 131 F-VVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVC 189
F V++ VV +S +R + N L KR R ++V RDGR +I++ ++VVGDV+
Sbjct: 226 FAVLLVIVVTATSDYRQSLQFQN-LNEEKRNIR---LEVTRDGRRVEISIYDIVVGDVIP 281
Query: 190 LQTGDQVPADGLFVHGKNLKLDD----GDDKL--------PCIFTGAKVVGGECSMLVTS 237
L GDQVPADG+ V G +L +D+ G+ K+ P + +G KV G +MLVT
Sbjct: 282 LNIGDQVPADGVLVAGHSLAVDESSMTGESKIVQKNSTKHPFLMSGCKVADGNGTMLVTG 341
Query: 238 VGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGC 297
VG NTE +LM +S+D+ E+ LQ+ ++ + + + + L+++ +V+ V V+
Sbjct: 342 VGVNTEWGLLMASVSEDNG------GETPLQVRLNGVATFIGIVGLTVAGVVLFVLVVRY 395
Query: 298 FAWGDDDHDPEPKG-GVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLL 356
F + P+ G ++ + ++ ++V F ++I+V +GL
Sbjct: 396 FTGHTKNEQGGPQFIGGKTKFEHVLDDLVEIF------------TVAVTIVVVAVPEGL- 442
Query: 357 PIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATD 416
P+ + + LAY+ +K+ +A R L C ++G T IC+ KT L+L+ + E +
Sbjct: 443 PLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVECYAGLQ 502
Query: 417 NSFIKSTSADVLDA----LREAIATTSYDE-----------AAVDDDDALLLWAKEFLDV 461
+S+ + A L E IA + + + A+L WA + L +
Sbjct: 503 KMDSPDSSSKLPSAFTSILVEGIAHNTTGSVFRSESGEIQVSGSPTERAILNWAIK-LGM 561
Query: 462 DGDKMKQNCTVE---AFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYL 518
D D +K + FN K R G+ +K D+SVHIHW+G+ EI+L CTHY+
Sbjct: 562 DFDALKSESSAVQFFPFNSEKKRGGVAVK------SPDSSVHIHWKGAAEIVLGSCTHYM 615
Query: 519 DRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVE----QQNEEEII--ELTE 572
D + + E K + I D+ A SLRC++ A + E +EE++ EL E
Sbjct: 616 DESESFVDMSEDKMGGLKDAIDDMAA--RSLRCVAIAFRTFEADKIPTDEEQLSRWELPE 673
Query: 573 CGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGA 632
L L +V +K VK ++ C++ AG+K++++ D+I A+ IA+ G++ A
Sbjct: 674 DDLILLAIVGIKDPCRPGVKNSVLLCQQ-AGVKVRMVTGDNIQTAKAIALECGIL----A 728
Query: 633 EDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVT 692
D S+ + +IE VFRS SEE R + + + VM +SP DKLL+VQ LK++G VVAVT
Sbjct: 729 SD-SDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRRGHVVAVT 787
Query: 693 GMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKF 752
G T DAP+L EAD+G+++G + + A++ SDI+ILD+NF ++ ++WGR V NI+KF
Sbjct: 788 GDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKF 847
Query: 753 IQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALA-----------A 801
IQ LTVN AA +N+VAAI GE+PL QLLWVNLIMD LGALALA A
Sbjct: 848 IQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMDRA 907
Query: 802 PVSLRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQA--NK 859
PV R PL +WRN+ +Q +YQV VL +G +L +++ N
Sbjct: 908 PVGRR-------------EPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNA 954
Query: 860 TDLK-AIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEM 918
+K ++FN+FV+CQVF NAR+ + +NIF +G+ +N F+ I+ +L + ++E
Sbjct: 955 ERVKNTVIFNAFVICQVFNEFNARKPDEINIF--RGVLRNHLFVGIISITIVLQVVIVEF 1012
Query: 919 VTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCIPMP 956
+ T++D + W VCIGI ++ P ++ K IP+P
Sbjct: 1013 LGTFASTTKLDWEMWLVCIGIGSISWPLAVIGKLIPVP 1050
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 314/984 (31%), Positives = 526/984 (53%), Gaps = 88/984 (8%)
Query: 12 FSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGL 71
F I E + ++++ + Q G Q +A L+TN + GISG + +L +R+ ++GSN
Sbjct: 114 FGITPEQLVIMSKDHNSGALEQYGGTQGLANLLKTNPEKGISGDDDDLLKRKTIYGSN-- 171
Query: 72 TLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVF 131
F R + D+ D T+I+L+ A SL LGIK G ++G DG +
Sbjct: 172 ------TYPRKKGKGFLRFLWDACHDLTLIILMVAAVASLALGIKTEGIKEGWYDGGSIA 225
Query: 132 VVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQ 191
+ V+ ++++ + ++ + L ++ R ++V+R GR +I++ ++VVGDV+ L
Sbjct: 226 FAVILVIVVTAVSDYKQSLQFQNLNDEK--RNIHLEVLRGGRRVEISIYDIVVGDVIPLN 283
Query: 192 TGDQVPADGLFVHGKNLKLDD----GDDKL--------PCIFTGAKVVGGECSMLVTSVG 239
G+QVPADG+ + G +L LD+ G+ K+ P + +G KV G SMLVT VG
Sbjct: 284 IGNQVPADGVLISGHSLALDESSMTGESKIVNKDANKDPFLMSGCKVADGNGSMLVTGVG 343
Query: 240 ENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFA 299
NTE +LM +S+D+ +E+ LQ+ ++ + + + I L+++ V+V+ + F
Sbjct: 344 VNTEWGLLMASISEDNG------EETPLQVRLNGVATFIGSIGLAVAAAVLVILLTRYFT 397
Query: 300 WGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIG 359
D++ P+ V+ K +G V+ ++ ++I+V +GL P+
Sbjct: 398 GHTKDNNGGPQF-VKGKTK--VGHVIDDVVKVL--------TVAVTIVVVAVPEGL-PLA 445
Query: 360 LFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSF 419
+ + LAY+ +K+ +A R L C ++G T IC+ KT L+L+ + E + +
Sbjct: 446 VTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVESYAGGKKTD 505
Query: 420 IKSTSADVLDALREAIATTSYDEAAVDD------------DDALLLWAKEFLDVDGDKMK 467
+ A + + E I+ + V + + A+L W + L ++ + +
Sbjct: 506 TEQLPATITSLVVEGISQNTTGSIFVPEGGGDLEYSGSPTEKAILGWGVK-LGMNFETAR 564
Query: 468 QNCTVE---AFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTL 524
++ FN K R G+ +K D VH+HW+G+ EI+L+ C Y+D G +
Sbjct: 565 SQSSILHAFPFNSEKKRGGVAVK------TADGEVHVHWKGASEIVLASCRSYIDEDGNV 618
Query: 525 QTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQ---NEEEIIE--LTECGLTWLG 579
+ + K F N I D+ +LRC++ A + E + EE+ + L E L L
Sbjct: 619 APMTDDKASFFKNGINDMAG--RTLRCVALAFRTYEAEKVPTGEELSKWVLPEDDLILLA 676
Query: 580 LVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGY 639
+V +K VK ++ C ++AG+K++++ D++ AR IA+ G++ ++
Sbjct: 677 IVGIKDPCRPGVKDSVVLC-QNAGVKVRMVTGDNVQTARAIALECGIL-----SSDADLS 730
Query: 640 DAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDA 699
+ +IE FR ++ R + D + VM +SP DKLL+VQ L+++G VVAVTG T DA
Sbjct: 731 EPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQGHVVAVTGDGTNDA 790
Query: 700 PSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTV 759
P+L EAD+G+++G + A++ SDI+ILD+NF ++ ++WGR V NI+KFIQ LTV
Sbjct: 791 PALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTV 850
Query: 760 NAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA--PVSLRVQLPAHATAAA 817
N AA +N+VAAI G++PL QLLWVNLIMD LGALALA P + P
Sbjct: 851 NVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHLMGRP----PVG 906
Query: 818 SASPLANKTVWRNIILQVLYQVFVLSATQLKGNELL----QVQANKTDLK-AIVFNSFVL 872
PL +WRN+++Q +YQV VL +G +L +V + T +K I+FN+FVL
Sbjct: 907 RKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVL 966
Query: 873 CQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKD 932
CQ F NAR+ + NIF KG+ +N F+ I+ +L + ++E + T+++ K
Sbjct: 967 CQAFNEFNARKPDEKNIF--KGVIKNRLFMGIIVITLVLQVIIVEFLGKFASTTKLNWKQ 1024
Query: 933 WCVCIGIAVMTLPTGLVAKCIPMP 956
W +C+GI V++ P LV K IP+P
Sbjct: 1025 WLICVGIGVISWPLALVGKFIPVP 1048
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust.
Identities = 325/995 (32%), Positives = 536/995 (53%), Gaps = 107/995 (10%)
Query: 12 FSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGL 71
F I+ E + + N + + Q G ++ +A L++N++ GI+ E E+ R+ FGSN
Sbjct: 128 FDIDLEKLVSMTRNQNMSNLQQYGGVKGVAEKLKSNMEQGINEDEKEVIDRKNAFGSNTY 187
Query: 72 TLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVF 131
N F + ++ +D T+I+L+ A SL LGIK G ++G LDG +
Sbjct: 188 PKKKGKN--------FFMFLWEAWQDLTLIILIIAAVTSLALGIKTEGLKEGWLDGGSIA 239
Query: 132 VVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQ 191
+ V+ ++++ + ++ + L ++ R ++VMR GR +I++ +VVVGDV+ L+
Sbjct: 240 FAVLLVIVVTAVSDYRQSLQFQNLNDEK--RNIQLEVMRGGRTVKISIYDVVVGDVIPLR 297
Query: 192 TGDQVPADGLFVHGKNLKLDDG-----------DDKLPCIFTGAKVVGGECSMLVTSVGE 240
GDQVPADG+ + G +L +D+ D K P + +G KV G +MLVT VG
Sbjct: 298 IGDQVPADGVLISGHSLAIDESSMTGESKIVHKDQKSPFLMSGCKVADGVGNMLVTGVGI 357
Query: 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAW 300
NTE +LM +S+D +E+ LQ+ ++ + + + + LS++L+V+V ++ F
Sbjct: 358 NTEWGLLMASISEDTG------EETPLQVRLNGLATFIGIVGLSVALVVLVALLVRYFT- 410
Query: 301 GDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVE--------MLSILVFVSR 352
T ++ G T+FI+ G TS + V+ ++I+V
Sbjct: 411 --------------GTTQDTNG--ATQFIK--GTTSISDIVDDCVKIFTIAVTIVVVAVP 452
Query: 353 DGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELW 412
+GL P+ + + LAY+ +K+ +A R L C ++G T IC+ KT L+L+ + E +
Sbjct: 453 EGL-PLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVETY 511
Query: 413 IATDNSFIKSTSADVLDAL----REAIATTSY-------DEAAVD-----DDDALLLWAK 456
+ + + L E +A + D V+ + A+L WA
Sbjct: 512 AGGSKMDVADNPSGLHPKLVALISEGVAQNTTGNIFHPKDGGEVEISGSPTEKAILSWAY 571
Query: 457 EFLDVDGDKMKQNCTV---EAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSM 513
+ L + D ++ + FN K R G+ + GD+ V IHW+G+ EI+L+
Sbjct: 572 K-LGMKFDTIRSESAIIHAFPFNSEKKRGGVAVL------RGDSEVFIHWKGAAEIVLAC 624
Query: 514 CTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVE------QQNEEEI 567
CT Y+D +GTLQ++ E +++ F I + N SLRC++ AC+ E +Q + +
Sbjct: 625 CTQYMDSNGTLQSI-ESQKEFFRVAIDSMAKN--SLRCVAIACRTQELNQVPKEQEDLDK 681
Query: 568 IELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLI 627
L E L L +V +K V++A+ C SAG+K++++ D++ A+ IA+ G++
Sbjct: 682 WALPEDELILLAIVGIKDPCRPGVREAVRIC-TSAGVKVRMVTGDNLQTAKAIALECGIL 740
Query: 628 LKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGE 687
+ + +IE VFR SE+ R + + VM +SP DKLL+VQ L++ G+
Sbjct: 741 -----SSDTEAVEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKNGD 795
Query: 688 VVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCN 747
VVAVTG T DAP+L EAD+G+S+G + A++ SDI+ILD+NF ++ ++WGR V
Sbjct: 796 VVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYA 855
Query: 748 NIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA-PVSLR 806
NI+KFIQ LTVN AA +N+VAA+ G++PL+ QLLWVNLIMD LGALALA P +
Sbjct: 856 NIQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDH 915
Query: 807 VQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQV----QANKTDL 862
+ H T PL +WRN+++Q YQV VL G +L + A+ ++
Sbjct: 916 LM---HRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAVEV 972
Query: 863 K-AIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTV 921
K ++FN+FV+CQ+F NAR+ + +N+F +G+++NP F+ IVG FIL I ++ +
Sbjct: 973 KNTMIFNAFVMCQIFNEFNARKPDEMNVF--RGVNKNPLFVAIVGVTFILQIIIVTFLGK 1030
Query: 922 VTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCIPMP 956
H R+ + W I I +++ P +V K IP+P
Sbjct: 1031 FAHTVRLGWQLWLASIIIGLVSWPLAIVGKLIPVP 1065
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 294/981 (29%), Positives = 491/981 (50%), Gaps = 105/981 (10%)
Query: 12 FSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGL 71
F +E + + + N + + G + IA + +L G+ E+ +R + ++G N
Sbjct: 93 FYVEADELASMVRNHDTKSLTKIGGPEGIAQKVSVSLAEGVRSSELHIREK--IYGENRY 150
Query: 72 TLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVF 131
T + PA F + ++++D T+I+L+ CA +S+ +G+ GF +G+ DG +
Sbjct: 151 T-------EKPAR-SFLTFVWEALQDITLIILMVCAVVSIGVGVATEGFPKGMYDGTGIL 202
Query: 132 VVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQ 191
+ I VV ++++ + ++ L R ++ ++V RDG +++++ ++VVGDVV L
Sbjct: 203 LSIILVVMVTAISDYKQSLQFRDL--DREKKKIIIQVTRDGSRQEVSIHDLVVGDVVHLS 260
Query: 192 TGDQVPADGLFVHGKNLKLDDG-----------DDKLPCIFTGAKVVGGECSMLVTSVGE 240
GDQVPADG+F+ G NL++D+ + + P + +G KV G MLVT+VG
Sbjct: 261 IGDQVPADGIFISGYNLEIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGM 320
Query: 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAW 300
TE LM LS+ E+ LQ+ ++ + + + KI L ++L VV C
Sbjct: 321 RTEWGKLMDTLSEGGE------DETPLQVKLNGVATIIGKIGLGFAVLTFVVL---C--- 368
Query: 301 GDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGL 360
+R V++ +T++ T + + ++I+V +GL P+ +
Sbjct: 369 ------------IRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVPEGL-PLAV 415
Query: 361 FICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIA------ 414
+ LA+A K+L RA R+L C ++G T ICT KT L+ +H + ++WI
Sbjct: 416 TLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICENIKER 475
Query: 415 TDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAK-------EFL-----DVD 462
+ +F + S V + L +AI + E D + + EF DVD
Sbjct: 476 QEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAILEFGLLLGGDVD 535
Query: 463 GDKMKQNC-TVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRH 521
+ + +E FN K + +L +G + V +G+ EI+L MC +D +
Sbjct: 536 TQRREHKILKIEPFNSDKKKMSVLTSHSGGK------VRAFCKGASEIVLKMCEKVVDSN 589
Query: 522 GTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLV 581
G L E K + ++ I + C+ + +E +L G T + +V
Sbjct: 590 GESVPLSEEKIASISDVIEGFASEALRTLCLVYT-----DLDEAPRGDLPNGGYTLVAVV 644
Query: 582 RLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDA 641
+K V++A++ C ++AGI ++++ D+I+ A+ IA G++ G
Sbjct: 645 GIKDPVRPGVREAVQTC-QAAGITVRMVTGDNISTAKAIAKECGILTAGGV--------- 694
Query: 642 AVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPS 701
IE S FR+ ++ ++VMA + PLDK +V L++ GEVVAVTG T DAP+
Sbjct: 695 -AIEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRKMGEVVAVTGDGTNDAPA 753
Query: 702 LKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNA 761
L EAD+G+++G + A++ +D++I+D+NF TI KWGR V NI+KF+Q LTVN
Sbjct: 754 LHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNV 813
Query: 762 AAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPV---SLRVQLPAHATAAAS 818
A +N V+A G PL QLLWVN+IMD LGALALA L + P TA+
Sbjct: 814 VALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTAS-- 871
Query: 819 ASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTD--LKAIVFNSFVLCQVF 876
+ +WRNII Q +YQ+ VL G ++L + + L I+FNSFV CQVF
Sbjct: 872 ---FITRAMWRNIIGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQVF 928
Query: 877 VLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDW--C 934
+N+REIE +N+FE G+ ++ F+ ++ + ++E + + + W C
Sbjct: 929 NEVNSREIEKINVFE--GMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLC 986
Query: 935 VCIGIAVMTLPTGLVAKCIPM 955
+ IG M L GL KCIP+
Sbjct: 987 ILIGSVSMILAVGL--KCIPV 1005
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust.
Identities = 299/980 (30%), Positives = 489/980 (49%), Gaps = 100/980 (10%)
Query: 12 FSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGL 71
FSIE + + + + + Q G ++ +A + +L GI E+ +R + +FG N
Sbjct: 93 FSIEADELASMVRKNDTKSLAQKGGVEELAKKVSVSLSEGIRSSEVPIREK--IFGENRY 150
Query: 72 TLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVF 131
T + PA F + +++ D T+I+L+ CA +S+ +G+ GF +G+ DG +
Sbjct: 151 T-------EKPAR-SFLMFVWEALHDITLIILMVCAVVSIGVGVATEGFPRGMYDGTGIL 202
Query: 132 VVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQ 191
+ I VV ++++ + ++ L R ++ V+V RDG ++I++ ++VVGDVV L
Sbjct: 203 LSILLVVMVTAISDYKQSLQFRDL--DREKKKIIVQVTRDGSRQEISIHDLVVGDVVHLS 260
Query: 192 TGDQVPADGLFVHGKNLKLDDG-----------DDKLPCIFTGAKVVGGECSMLVTSVGE 240
GDQVPADG+F+ G NL++D+ + + P + +G KV G MLVT+VG
Sbjct: 261 IGDQVPADGIFISGYNLEIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGM 320
Query: 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAW 300
TE LM+ L E+ LQ+ ++ + + + KI LS ++L VV C
Sbjct: 321 RTEWGKLMETLVDGGE------DETPLQVKLNGVATIIGKIGLSFAVLTFVVL---C--- 368
Query: 301 GDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGL 360
+R + + T + T + + ++I+V +GL P+ +
Sbjct: 369 ------------IRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVPEGL-PLAV 415
Query: 361 FICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWI------- 413
+ LA+A KKL RA R+L C ++G T ICT KT L+ +H + ++WI
Sbjct: 416 TLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWICDKVQER 475
Query: 414 --ATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAK-------EF-LDVDG 463
+ SF S +V L + I + E D D + EF L + G
Sbjct: 476 QEGSKESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNTQILGSPTERAILEFGLLLGG 535
Query: 464 D-----KMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYL 518
D K + +E FN K + +L+ G +G+ EI+L MC + +
Sbjct: 536 DFNTQRKEHKILKIEPFNSDKKKMSVLIALPG------GGARAFCKGASEIVLKMCENVV 589
Query: 519 DRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWL 578
D +G L E + + ++ I + +LR + K +++ E L + G T +
Sbjct: 590 DSNGESVPLTEERITSISDIIEGFAS--EALRTLCLVYKDLDEAPSGE---LPDGGYTMV 644
Query: 579 GLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNG 638
+V +K V++A++ C ++AGI ++++ D+I+ A+ IA G+ + G
Sbjct: 645 AVVGIKDPVRPGVREAVQTC-QAAGITVRMVTGDNISTAKAIAKECGIYTEGGL------ 697
Query: 639 YDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRD 698
IE S FR S ++ ++VMA + PLDK +V L++ GEVVAVTG T D
Sbjct: 698 ----AIEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRKIGEVVAVTGDGTND 753
Query: 699 APSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLT 758
AP+L EAD+G+++G + A++ +D++I+D+NF TI +WGR V NI+KF+Q LT
Sbjct: 754 APALHEADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLT 813
Query: 759 VNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQLPAHATAAAS 818
VN A +N V+A G PL QLLWVN+IMD LGALALA L A A +
Sbjct: 814 VNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPP-NEGLMKRAPIART 872
Query: 819 ASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTD--LKAIVFNSFVLCQVF 876
AS KT+WRNI Q +YQ+ VL G LL++ + L ++FNSFV CQVF
Sbjct: 873 AS-FITKTMWRNIAGQSVYQLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQVF 931
Query: 877 VLINAREIEALNIFEGKGLHQNPW-FLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCV 935
IN+REIE +N+F+G N W F ++ + + ++E + + + W +
Sbjct: 932 NEINSREIEKINVFKG---MFNSWVFTWVMTVTVVFQVIIVEFLGAFASTVPLSWQHWLL 988
Query: 936 CIGIAVMTLPTGLVAKCIPM 955
I I + + ++ KC+P+
Sbjct: 989 SILIGSLNMIVAVILKCVPV 1008
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust.
Identities = 302/991 (30%), Positives = 500/991 (50%), Gaps = 118/991 (11%)
Query: 12 FSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGL 71
++I + + + G + I+ + ++ D GI E++ R+ ++G N
Sbjct: 98 YAINPDELALITSKHDSKALKMHGGVDGISIKVRSSFDHGIYASELD--TRQNIYGVN-- 153
Query: 72 TLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVF 131
+ P S F + D+++D T+I+L+ CA LS+ +G+ G+ +G+ DG +
Sbjct: 154 -----RYAEKP-SRSFWMFVWDALQDMTLIILMVCALLSVAVGLATEGWPKGMYDGLGII 207
Query: 132 VVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQ 191
+ I VV ++++ + ++ + L +++ ++ + V RDGR ++I++ ++VVGD+V L
Sbjct: 208 LSIFLVVMVTAVSDYKQSLQFKELDNEK--KKIFIHVTRDGRRQKISIYDLVVGDIVHLS 265
Query: 192 TGDQVPADGLFVHGKNLKLDDG------------DDKLPCIFTGAKVVGGECSMLVTSVG 239
GDQVPADGL++HG +L +D+ DK P I G KV G M+VT+VG
Sbjct: 266 IGDQVPADGLYIHGYSLLIDESSLSGESDPVYVSQDK-PFILAGTKVQDGSAKMIVTAVG 324
Query: 240 ENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFA 299
TE LM LS+ E+ LQ+ ++ + + + KI L ++L +V +
Sbjct: 325 MRTEWGKLMSTLSEGGE------DETPLQVKLNGVATIIGKIGLVFAILTFLVLL----- 373
Query: 300 WGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIG 359
VR + + M + K+ T N + ++I+V +GL P+
Sbjct: 374 -------------VRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGL-PLA 419
Query: 360 LFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIA-TDNS 418
+ + LA+A KKL +A R+L C ++G ICT KT L+ +H + ++WI+ S
Sbjct: 420 VTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNHMVVDKIWISEVSKS 479
Query: 419 FIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAK----------------EF---L 459
+T + L+++ + + + ++ A ++ K EF L
Sbjct: 480 VTSNTISGELNSVVSSSTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGL 539
Query: 460 DVDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHW--RGSPEIILSMC 514
D D + CT VE FN K + +L+ S W +G+ EIIL MC
Sbjct: 540 KGDHDAEYRACTKVKVEPFNSVKKKMAVLISLPNGTS--------RWFCKGASEIILQMC 591
Query: 515 THYLDRHGTLQTLDEHKR----DAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIEL 570
+D G L E +R D N+F D +LR + A K V+ ++
Sbjct: 592 DMMVDGDGNAIPLSEAQRKNILDTINSFASD------ALRTLCLAYKEVDDDIDDNADSP 645
Query: 571 TECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKP 630
T G T + + +K VK A++ C SAGI ++++ D+IN A+ IA G++ +
Sbjct: 646 T-SGFTLIAIFGIKDPVRPGVKDAVKTCM-SAGITVRMVTGDNINTAKAIAKECGILTE- 702
Query: 631 GAEDHSNGYDAAVIEASVFRS-SSEETRSLMVDNVRVMANASPLDKLLMVQCLKQK-GEV 688
D IE F S S+EE R L++ N++VMA + PLDK +V L+ EV
Sbjct: 703 ---------DGVAIEGPEFHSKSTEEMRDLIL-NIQVMARSLPLDKHTLVTNLRGMFDEV 752
Query: 689 VAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNN 748
V+VTG T DAP+L EAD+G+++G + A++ +D+++LD+NFTTI +WGR V N
Sbjct: 753 VSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDNFTTIINVARWGRAVYIN 812
Query: 749 IRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA--PVSLR 806
I+KF+Q LTVN A +N V+A G PL QLLWVN+IMD LGALALA P
Sbjct: 813 IQKFVQFQLTVNIVALVINFVSACIIGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEM 872
Query: 807 VQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQA--NKTDLKA 864
++ P K +WRNI+ Q LYQ+FVL A G LL ++ +K+ +
Sbjct: 873 MKRP----PVRKGESFITKFMWRNIMGQSLYQLFVLGALMFGGERLLNIKGADSKSIINT 928
Query: 865 IVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTH 924
++FNSFV CQVF IN+RE++ +N+F +G+ N F+ ++ + +IE +
Sbjct: 929 LIFNSFVFCQVFNEINSREMQKINVF--RGIISNWIFIAVIAATVAFQVVIIEFLGTFAS 986
Query: 925 GTRMDLKDWCVCIGIAVMTLPTGLVAKCIPM 955
++ + W + +G+ ++L G++ KCIP+
Sbjct: 987 TVPLNWQHWLLSVGLGSISLIVGVILKCIPV 1017
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 298/967 (30%), Positives = 487/967 (50%), Gaps = 116/967 (11%)
Query: 35 GRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDS 94
G + I+ + ++ D GI +++ R+ ++G N + P S F + D+
Sbjct: 99 GGVDGISKKVRSSFDHGICASDLD--TRQNIYGVN-------RYAEKP-SRSFWMFVWDA 148
Query: 95 IKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINEL 154
+D T+I+L+ CA LS+ +G+ G+ +G+ DG + + I VV ++++ + ++ +
Sbjct: 149 FQDMTLIILMVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKE 208
Query: 155 LVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDG- 213
L +++ ++ + V RDGR ++I++ ++VVGD+V L GDQVPADGL++HG +L +D+
Sbjct: 209 LDNEK--KKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESS 266
Query: 214 -----------DDKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDY 262
DK P I G KV G M+VT+VG TE LM LS+
Sbjct: 267 LSGESDPVYVSQDK-PFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGE------ 319
Query: 263 KESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMG 322
E+ LQ+ ++ + + + KI L ++L +V + VR + + M
Sbjct: 320 DETPLQVKLNGVATVIGKIGLVFAILTFLVLL------------------VRFLIDKGMT 361
Query: 323 EVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLP 382
+ K+ T N + ++I+V +GL P+ + + LA+A KKL +A R+L
Sbjct: 362 VGLLKWYSTDALTIVNYFATAVTIIVVAVPEGL-PLAVTLSLAFAMKKLMNDKALVRHLS 420
Query: 383 VCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKST----------SADVLDALR 432
C ++G ICT KT L+ ++ + ++WI+ + + S S+ L L
Sbjct: 421 ACETMGSAGTICTDKTGTLTTNYMVVDKIWISEVSKSVTSNTISGELNSVVSSRTLSLLL 480
Query: 433 EAIATTSYDEAAVDDDDALLLWAK-------EF-LDVDG--DKMKQNCT---VEAFNISK 479
+ I + E + D + EF L ++G D CT VE FN K
Sbjct: 481 QGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGLEGVHDAEYSACTKVKVEPFNSVK 540
Query: 480 NRAGLLLKWNGSESDGDNSVHIHW--RGSPEIILSMCTHYLDRHGTLQTLDEHKR----D 533
+ +L+ S W +G+ EIIL MC +D G L E +R D
Sbjct: 541 KKMAVLISLPSGTS--------RWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILD 592
Query: 534 AFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQ 593
N+F D +LR + A K V+ ++ T G T + + +K VK
Sbjct: 593 TINSFASD------ALRTLCLAYKEVDDDIDDNADSPTS-GFTLIAIFGIKDPVRPGVKD 645
Query: 594 AIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSS 653
A++ C SAGI ++++ D+IN A+ IA G++ + D IE F S S
Sbjct: 646 AVKTCM-SAGITVRMVTGDNINTAKAIAKECGILTE----------DGVAIEGPEFHSKS 694
Query: 654 EETRSLMVDNVRVMANASPLDKLLMVQCLKQK-GEVVAVTGMSTRDAPSLKEADVGVSIG 712
E ++ N++VMA + PLDK +V L+ EVV+VTG T DAP+L EAD+G+++G
Sbjct: 695 PEEMRDLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMG 754
Query: 713 ERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAI 772
+ A++ +D+++LD+NFTTI +WGR V NI+KF+Q LTVN A +N V+A
Sbjct: 755 IAGTEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSAC 814
Query: 773 FCGEIPLEPFQLLWVNLIMDVLGALALAA--PVSLRVQLPAHATAAASASPLANKTVWRN 830
G PL QLLWVN+IMD LGALALA P ++ P K +WRN
Sbjct: 815 ITGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRP----PVRKGESFITKVMWRN 870
Query: 831 IILQVLYQVFVLSATQLKGNELLQVQA--NKTDLKAIVFNSFVLCQVFVLINAREIEALN 888
I+ Q LYQ+FVL A G LL ++ +K+ + ++FNSFV CQVF IN+RE++ +N
Sbjct: 871 IMGQSLYQLFVLGALMFGGESLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKIN 930
Query: 889 IFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGIAVMTLPTGL 948
+F +G+ N F+ ++ + +IE + ++ + W + +G+ ++L G+
Sbjct: 931 VF--RGIISNWIFIAVIAATVAFQVVIIEFLGTFASTVPLNWQHWLLSVGLGSISLIVGV 988
Query: 949 VAKCIPM 955
+ KCIP+
Sbjct: 989 ILKCIPV 995
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 305/1001 (30%), Positives = 494/1001 (49%), Gaps = 129/1001 (12%)
Query: 6 DREFRRFSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQV 65
D + F I+ + + + E+ G++ IA L T+L GI + L +R+ +
Sbjct: 95 DVQAAGFQIDADELASIVESRDTKKLTVHGQLNGIADKLGTSLTNGIVTDKDLLNQRQDI 154
Query: 66 FGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGIL 125
+G N E + F + ++++D+T+I+L CA SL++GI G+ QG
Sbjct: 155 YGVNKFA---ETEIRS-----FWEFVWEALEDTTLIILSACAIFSLVVGITTEGWPQGAH 206
Query: 126 DGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVG 185
DG + I VV ++ + ++ L + R+ V+V R+G +++ + +++ G
Sbjct: 207 DGVGIVASILLVVSVTGTSNYQQSLQFRDL--DKEKRKILVQVTRNGLRQRVLIDDLLPG 264
Query: 186 DVVCLQTGDQVPADGLFVHGKNLKLDDG-----------DDKLPCIFTGAKVVGGECSML 234
D V L GDQVPADGLF+ G ++ +D+ ++ P + +G KV+ G C ML
Sbjct: 265 DAVHLAVGDQVPADGLFISGFSVLVDESSLTGESEPVFVNEDNPYLLSGTKVLDGSCKML 324
Query: 235 VTSVGENTETSMLMKLLSK--DDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVV 292
VT+VG T+ LM +L+ DD E+ LQ ++ + + + KI L ++L +V
Sbjct: 325 VTAVGMRTQWGKLMAVLTDGGDD--------ETPLQTRLNGVANTIGKIGLFFAVLTFIV 376
Query: 293 QVLGC----------FAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVE 342
G +W DD V EI+ + +
Sbjct: 377 LSQGIIGQKYLDGLLLSWSGDD------------VLEIL----------------DHFAV 408
Query: 343 MLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLS 402
++I+V +GL P+ + + LA+A KK+ +A R L C ++G T IC+ KT L+
Sbjct: 409 AVTIVVVAVPEGL-PLAVTLSLAFAMKKMMNDKALVRQLAACETMGSATVICSDKTGTLT 467
Query: 403 LDHANMAEL-----WIATDNSFIKSTSAD----VLDALREAIATTSYDEAAVDDDD---- 449
+ + + I +N + S++ ++ L E+I + E + D
Sbjct: 468 TNRMTVVKACICGNTIQVNNPQTPNMSSNFPEVAVETLLESIFNNTSGEVVTNQDGKYQI 527
Query: 450 -------ALLLWAKEFLDVDGD-KMKQNCT----VEAFNISKNRAGLLLKWNGSESDGDN 497
ALL +A L +DGD K KQ + VE FN +K R +L+ G
Sbjct: 528 LGTPTETALLEFA---LLLDGDCKEKQLGSKIVKVEPFNSTKKRMSTILELPGG------ 578
Query: 498 SVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACK 557
H +G+ EI+L+ C ++D G + LD+ N+ I+ + +LR + A +
Sbjct: 579 GYRAHCKGASEIVLAACDKFIDERGCIVPLDDKTSSKLNDIIKAFSS--EALRTLCLAYR 636
Query: 558 RVEQQ-NEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINI 616
+E+ + +E I L G T +G+V +K V+Q++ CR SAGI +++I D+I+
Sbjct: 637 EMEEGFSTQEQIPLQ--GYTCIGIVGIKDPVRPGVRQSVATCR-SAGISVRMITGDNIDT 693
Query: 617 ARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKL 676
A+ IA G++ K D IE + FR S E ++ ++V+A +SPLDK
Sbjct: 694 AKAIARECGILTK----------DGIAIEGAEFREKSAEELHDLIPKMQVLARSSPLDKH 743
Query: 677 LMVQCLKQK-GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTI 735
+V+ L+ EVVAVTG T DAP+L+EAD+G+++G + A++ +D+VILD+NF+TI
Sbjct: 744 TLVKHLRTAFNEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKESADVVILDDNFSTI 803
Query: 736 AANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLG 795
KWGR V NI+KF+Q LTVN A VN +A F G+ PL QLLWVN+IMD LG
Sbjct: 804 VTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFTSACFTGDAPLTAVQLLWVNMIMDTLG 863
Query: 796 ALALAAPVSLRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQV 855
ALALA L A + N +WRNI+ Q LYQ V+ Q +G L +
Sbjct: 864 ALALATEPP-NNNLMKKAPVGRKGKFITN-VMWRNIVGQSLYQFAVMWYLQTQGKHLFGL 921
Query: 856 QANKTD--LKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFL-VIVGFIFILD 912
+ D L I+FN+FV CQVF I++RE+E +N+ +G+ N FL V+ G IF
Sbjct: 922 EGYHADIVLNTIIFNTFVFCQVFNEISSREMEDINVL--RGMAGNSIFLGVLTGTIF-FQ 978
Query: 913 IAVIEMVTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCI 953
+++ + + T + + W + I + +P K I
Sbjct: 979 FILVQFLGDFANTTPLTQQQWLISILFGFLGMPIAAAIKLI 1019
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 956 | ||||||
| 225451324 | 1057 | PREDICTED: calcium-transporting ATPase 1 | 0.935 | 0.845 | 0.386 | 0.0 | |
| 224102125 | 984 | autoinhibited calcium ATPase [Populus tr | 0.939 | 0.912 | 0.376 | 1e-173 | |
| 225432828 | 1011 | PREDICTED: putative calcium-transporting | 0.935 | 0.884 | 0.380 | 1e-173 | |
| 225432826 | 1007 | PREDICTED: putative calcium-transporting | 0.932 | 0.884 | 0.384 | 1e-171 | |
| 255552023 | 1013 | cation-transporting atpase plant, putati | 0.943 | 0.890 | 0.369 | 1e-171 | |
| 225432838 | 1012 | PREDICTED: putative calcium-transporting | 0.934 | 0.882 | 0.376 | 1e-170 | |
| 225432836 | 1011 | PREDICTED: putative calcium-transporting | 0.934 | 0.883 | 0.370 | 1e-169 | |
| 147790888 | 1007 | hypothetical protein VITISV_002789 [Viti | 0.928 | 0.881 | 0.373 | 1e-169 | |
| 225432819 | 1069 | PREDICTED: putative calcium-transporting | 0.933 | 0.834 | 0.368 | 1e-168 | |
| 255542300 | 996 | cation-transporting atpase plant, putati | 0.930 | 0.893 | 0.374 | 1e-168 |
| >gi|225451324|ref|XP_002273945.1| PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/976 (38%), Positives = 570/976 (58%), Gaps = 82/976 (8%)
Query: 12 FSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGL 71
F+I+Q+ + + + + HQ G I+ + A L+T+ GI G E +L+ RR VFGSN
Sbjct: 116 FNIDQKMLTETVRDKDFERLHQFGGIKQLVAVLKTDEKDGIDGHEADLKHRRDVFGSN-- 173
Query: 72 TLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVF 131
+ P F + ++ KD+ +I+L+ CA LSL GIK+ G ++G DG +
Sbjct: 174 ------QYRRPPKKSFFSFVVEAFKDTIIIILMVCAILSLGFGIKQEGIKEGWYDGGSIV 227
Query: 132 VVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQ 191
+ I VV +SS+ F ++ + L S+ + + V+V+R GR + +++ ++VVGD+VCL
Sbjct: 228 IAIFLVVIVSSVSNFRQSRQFQKLSSETSDIK--VQVVRQGRRQPVSIFQLVVGDIVCLN 285
Query: 192 TGDQVPADGLFVHGKNLKLDDG------------DDKLPCIFTGAKVVGGECSMLVTSVG 239
GDQVPADGLF+ G +LK+D+ D P +F+G KV G +MLVTSVG
Sbjct: 286 IGDQVPADGLFMEGHSLKVDESSMTGESDHVEINDKDNPFLFSGTKVSDGFGTMLVTSVG 345
Query: 240 ENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFA 299
NT +M I R+ +++ LQ +D++ S + K+ L+++L+V+VV ++ F
Sbjct: 346 MNTAWGEMM------SSIRRELDEQTPLQARLDKLASTIGKLGLAVALIVLVVLIIRYFT 399
Query: 300 WG-DDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPI 358
+D++ + G ++ + ++M VV + ++I+V +GL P+
Sbjct: 400 GNTEDENGMQEFNGSKTNINDVMDAVV------------HIISAAVTIVVVAIPEGL-PL 446
Query: 359 GLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIAT--- 415
+ + LAY+ K++ +A R L C ++G T ICT KT L+L+ + E W+
Sbjct: 447 AVTLSLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTLNKMKVVEFWLGNEVI 506
Query: 416 -DNSFIKSTSADVLDALREAIA-----------TTSYDE-AAVDDDDALLLWAKEFLDVD 462
D+++++ + VL L++ + +TS E + + A+L WA L +D
Sbjct: 507 EDDTYLE-IAPSVLQLLKQGVGLNTTGSVCKLPSTSVPEISGSPTETAILTWAVVDLGMD 565
Query: 463 GDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLD 519
D+ KQ+C VEAFN K R+G+L++ + D ++ HW+G+ E+IL+ C+HY D
Sbjct: 566 IDEQKQSCEILHVEAFNSEKKRSGVLVR-----TITDQTIQTHWKGAAEMILATCSHYFD 620
Query: 520 RHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLG 579
+ G + +D+ KR F IRD+ A SLRCI+FA K+V Q+N + +L E G+T LG
Sbjct: 621 KGGKTKLMDDDKRMQFGGIIRDMAAK--SLRCIAFAYKQVLQENGQSHEKLEETGMTLLG 678
Query: 580 LVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGY 639
LV LK V++A+EDCR+ AG+KIK+I D+I A+ IA+ G ILKP ED +N
Sbjct: 679 LVGLKDPCRPGVRRAVEDCRD-AGVKIKMITGDNIFTAKAIAMECG-ILKPD-EDMNN-- 733
Query: 640 DAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDA 699
AV+E FR+ S+E R +D +RVMA +SP DKLLMVQ LKQKG VVAVTG T DA
Sbjct: 734 --AVVEGVTFRNFSDEERMEKIDMIRVMARSSPFDKLLMVQSLKQKGHVVAVTGDGTNDA 791
Query: 700 PSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTV 759
P+LKEAD+G+S+G + + A++ SDIVILD+NFT++ L+WGRCV NNI+KFIQ LTV
Sbjct: 792 PALKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLRWGRCVYNNIQKFIQFQLTV 851
Query: 760 NAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQLPAHATAAASA 819
N AA +N VAA+ G++PL QLLWVNLIMD LGALALA L +
Sbjct: 852 NVAALVINFVAAVSSGDVPLTAVQLLWVNLIMDTLGALALATERPTNDLL--KKSPVGRT 909
Query: 820 SPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLI 879
PL + +WRN+I Q LYQV VL Q KG ++ V + ++FN+FVLCQVF
Sbjct: 910 KPLISNVMWRNLIAQALYQVAVLLILQFKGKDIFNVDEKVKN--TLIFNTFVLCQVFNEF 967
Query: 880 NAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGI 939
NAR +E N+F KG+ +N FL I+GF +L + ++E + R++ W CI I
Sbjct: 968 NARHMEKKNVF--KGILKNRLFLGIIGFTIVLQVVMVEFLKRFADTVRLNWGQWGACIAI 1025
Query: 940 AVMTLPTGLVAKCIPM 955
A ++ P + KC+P+
Sbjct: 1026 ASLSWPIAWLVKCLPV 1041
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224102125|ref|XP_002312557.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222852377|gb|EEE89924.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 369/980 (37%), Positives = 559/980 (57%), Gaps = 82/980 (8%)
Query: 11 RFSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNG 70
F I Q ++ +L + G I IA+++ T++D GI G ++ RR+Q FGSN
Sbjct: 41 HFKIHQSSLSELVKKKDLDQLENFGGIVRIASAIGTDIDGGIYGGPEDIDRRQQAFGSN- 99
Query: 71 LTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMV 130
K P + F + ++ KD T+ +LL CA LSL GIK +G ++G DG +
Sbjct: 100 -------TYKKPPTKGFFHFVVEAFKDLTIAILLGCAALSLGFGIKEHGLKEGWYDGGSI 152
Query: 131 FVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCL 190
FV + ++ +S++ + +N + L + S + V+R GR +++++ E+VVGDVVCL
Sbjct: 153 FVAVFLIIAVSAISNYRQNRQFDKL--SKISNNIQIDVVRSGRRQEVSIFELVVGDVVCL 210
Query: 191 QTGDQVPADGLFVHGKNLKLDDGD------------DKLPCIFTGAKVVGGECSMLVTSV 238
+ GDQVPADGLF+ G +L++D+ K P + +G KV G MLVTSV
Sbjct: 211 KIGDQVPADGLFIDGHSLQIDESSMTGESDHVEINHKKNPFLVSGTKVADGYGQMLVTSV 270
Query: 239 GENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCF 298
G NT +M +S+D +++ LQ ++++ S + K+ L+++ LV++V ++ F
Sbjct: 271 GMNTTWGEMMSHISRDTN------EQTPLQARLNKLTSSIGKVGLAVAFLVLLVLLVRYF 324
Query: 299 AWGDDDHDPEPK-GGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLP 357
D + + G ++ +I+ ++I+V +GL P
Sbjct: 325 TGNTQDESGKKEFNGSKTKADDIV------------NAVVGIVAAAVTIIVVAIPEGL-P 371
Query: 358 IGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDN 417
+ + + LAY+ K++ +A R LP C ++G T ICT KT L+++ + + W+ ++
Sbjct: 372 LAVTLTLAYSMKRMMKDQAMVRKLPACETMGSATTICTDKTGTLTMNLMKVTKFWLGQES 431
Query: 418 ---SFIKSTSADVLDALREAIATTS----YDEA--------AVDDDDALLLWAKEFLDVD 462
S S VL+ +++ +A + Y E+ + A+L WA L+++
Sbjct: 432 MEQSNPSPVSPYVLELIKQGVALNTTGSVYRESPESKLEFSGSPTEKAILSWAVLELNMN 491
Query: 463 GDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLD 519
++MKQ+CT VEAFN K R+G+L S D+++H+HW+G+ E+IL+MC+ Y D
Sbjct: 492 MEQMKQSCTILQVEAFNSQKKRSGVL-----SMKKMDHTIHVHWKGAAEMILAMCSSYYD 546
Query: 520 RHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIE---LTECGLT 576
G ++ +D+ +R+ F I+D+ A+ SLRCI+FA K++ + E+ E L E LT
Sbjct: 547 ASGLMKEMDDRERNTFKQIIQDMAAS--SLRCIAFAHKQISEDQYEDGKEDKTLKEDCLT 604
Query: 577 WLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHS 636
LGLV +K VK+A++DC+ AG+ +K+I D++ AR IAI G ILKPGAE+ S
Sbjct: 605 LLGLVGIKDPCRPGVKKAVDDCQR-AGVNVKMITGDNVFTARAIAIECG-ILKPGAENIS 662
Query: 637 NGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMST 696
AV+E FR+ + E R VD + VMA +SP DKLLMVQCLKQKG VVAVTG T
Sbjct: 663 ----GAVVEGEEFRNYTHEQRMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGT 718
Query: 697 RDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLH 756
DAP+LKEAD+G+S+G + + A++ SDIVILD+NF ++A L+WGRCV NNI+KFIQ
Sbjct: 719 NDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLRWGRCVYNNIQKFIQFQ 778
Query: 757 LTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQLPAHATAA 816
LTVN AA +N VAA+ GE+PL QLLWVNLIMD LGALALA Q T
Sbjct: 779 LTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEQP--TQELMEKTPV 836
Query: 817 ASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVF 876
PL +WRN++ Q LYQ+ +L Q KG + V D ++FN FVLCQVF
Sbjct: 837 GRTEPLITNIMWRNLLSQALYQIAILLTLQFKGESIFGVTERVND--TLIFNIFVLCQVF 894
Query: 877 VLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVC 936
NAR++E N+F KG+H+N FL I+G +L + ++E + R++ W C
Sbjct: 895 NEFNARKLEEKNVF--KGIHKNKLFLGIIGITILLQVLMVEFLKKFADTERLNWGQWGAC 952
Query: 937 IGIAVMTLPTGLVAKCIPMP 956
IG A ++ P V KCIP+P
Sbjct: 953 IGTAALSWPICWVVKCIPVP 972
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432828|ref|XP_002279593.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 371/976 (38%), Positives = 562/976 (57%), Gaps = 82/976 (8%)
Query: 13 SIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLT 72
+I+ ++ + + + + G ++ +A +L+T+ GI G ++ R++ FGSN
Sbjct: 74 NIDHTSLTAVVKEKNLDQLRELGGVEGVADALKTDTKNGIHGAVEDVAERQETFGSN--- 130
Query: 73 LSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFV 132
P + F + ++ KD T+++LL CATLSL GIK +G ++G DG +FV
Sbjct: 131 -----TYPRPPTKSFFYFVLEAFKDLTILILLACATLSLGFGIKEHGLKEGWYDGGSIFV 185
Query: 133 VISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQT 192
+ V+ +S++ F +N E L + S V+V+RDG ++I++ E+VVGDVVCL+
Sbjct: 186 AVFLVISVSAVSNFRQNRQFEKL--SKVSNNIEVEVVRDGHRQKISIFEIVVGDVVCLKI 243
Query: 193 GDQVPADGLFVHGKNLKLDDGD------------DKLPCIFTGAKVVGGECSMLVTSVGE 240
GDQVPADGLF+ G +L++D+ + P +F+G KV G MLVTSVG
Sbjct: 244 GDQVPADGLFLDGHSLQVDESSMTGESDHVQVNSTQNPFLFSGTKVADGYAQMLVTSVGM 303
Query: 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAW 300
NT +M +S++ IN Q + LQ ++++ S + K+ L+++ LV+VV V+ F
Sbjct: 304 NTIWGEMMSTISRN--INEQ----TPLQARLNKLTSSIGKVGLAIAFLVLVVLVVRYFTR 357
Query: 301 GDDDHDPEPK-GGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIG 359
+D + + G ++ +I+ +V R + +V V+ LP+
Sbjct: 358 NTEDENGNQEFYGSKTKADDIVNAMV-------------RIIAAAVTIVVVAIPEGLPLA 404
Query: 360 LFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIAT---- 415
+ + LAY+ KK+ +A R LP C ++G T ICT KT L+L+ + E W+
Sbjct: 405 VTLTLAYSMKKMMADQAMVRKLPACETMGSATTICTDKTGTLTLNQMKVTEYWLGKEPVE 464
Query: 416 DNSFIKST---------SADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKM 466
D+S I S + + ++ A + + ++ + + A+L WA LD+D +++
Sbjct: 465 DSSSIASNVLKLIQQGVALNTTGSIYRATSGSEFEFSGSPTEKAILSWAVLELDMDMERL 524
Query: 467 KQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGT 523
KQN T VEAFN K R+G+L++ DN +H+HW+G+ E+IL+MC+ Y D G+
Sbjct: 525 KQNHTILHVEAFNSEKKRSGILMR-----KKADNKMHVHWKGAAEMILAMCSSYYDASGS 579
Query: 524 LQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIE----LTECGLTWLG 579
++ LD+ +R F I+ + A+ SLRCI+FA K++ ++ E+EI E LTE LT +G
Sbjct: 580 MKDLDDAERMTFEQIIQGMAAS--SLRCIAFAHKQIPEE-EQEISEGCQRLTEDSLTLIG 636
Query: 580 LVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGY 639
LV +K V++A+EDC + AG+ +K+I D++ AR IA G IL+P + +S
Sbjct: 637 LVGIKDPCRPGVRKAVEDC-QYAGVNVKMITGDNVFTARAIATECG-ILRPDRDMNSE-- 692
Query: 640 DAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDA 699
AV+E VFR + E R VD + VMA +SP DKLLMVQCLK KG VVAVTG T DA
Sbjct: 693 --AVVEGEVFRKYTPEERMEKVDKICVMARSSPFDKLLMVQCLKLKGHVVAVTGDGTNDA 750
Query: 700 PSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTV 759
P+LKEAD+G+S+G + + A++ SDI+ILD+NF ++A L+WGRCV NNI+KFIQ LTV
Sbjct: 751 PALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGRCVYNNIQKFIQFQLTV 810
Query: 760 NAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQLPAHATAAASA 819
N AA +N VAA+ GE+PL QLLWVNLIMD LGALALA R +
Sbjct: 811 NVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEQPTRELM--EKPPVGRT 868
Query: 820 SPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLI 879
PL + +WRNI+ Q LYQ+ VL Q +G + V + ++FN+FVLCQVF
Sbjct: 869 EPLISNIMWRNILAQALYQIAVLLTLQFRGESIFGVSEKVKN--TLIFNTFVLCQVFNEF 926
Query: 880 NAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGI 939
NAR++E N+F KGLH+N FL I+G IL + ++E + R++ W CIGI
Sbjct: 927 NARKLEKKNVF--KGLHKNKLFLGIIGMTIILQVVMVEFLKKFADTERLNWGQWGACIGI 984
Query: 940 AVMTLPTGLVAKCIPM 955
A + P G V K IP+
Sbjct: 985 AAASWPIGWVVKGIPV 1000
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432826|ref|XP_002279567.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 377/981 (38%), Positives = 560/981 (57%), Gaps = 90/981 (9%)
Query: 13 SIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLT 72
+ +Q ++ ++ ++ S T + G ++ +A LET+ + GI G + RR+ FGSN
Sbjct: 68 NFDQHSLTQIVKHKSLTQLLELGGVEGVAIVLETDAENGIHGAVEGVTCRRKAFGSN--- 124
Query: 73 LSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFV 132
+ P + F + ++ KD T+++L+ CATLSL GIK G ++G DG + V
Sbjct: 125 -----TYQEPPTKSFFYFVVEAFKDVTILILVACATLSLGFGIKEEGLKEGWYDGGSILV 179
Query: 133 VISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQT 192
+ V+ +S++ F +N + L + S V V+RDGR +QI++ EVVVGDVVCL+
Sbjct: 180 AVFLVISVSAVSNFRQNRQFDKL--SKVSNNIQVDVVRDGRRQQISIFEVVVGDVVCLKI 237
Query: 193 GDQVPADGLFVHGKNLKLDDG-----------DDKL-PCIFTGAKVVGGECSMLVTSVGE 240
GDQVPADGLF G +L++D+ D L P +F+G +V G MLVTSVG
Sbjct: 238 GDQVPADGLFQDGHSLQVDESSMTGESDHVEVDTSLNPFLFSGTRVADGYARMLVTSVGM 297
Query: 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAW 300
NT +M +S+D +++ LQ ++++ S + K+ L+++ LV+ V ++ F
Sbjct: 298 NTAWGEMMSTISRDAN------EQTPLQARLNKLTSSIGKVGLAVAFLVLTVLLVRYFTG 351
Query: 301 G--DDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPI 358
D++ + E KG + + +I+ VV R + +V V+ LP+
Sbjct: 352 STEDENGNQEFKGSL-TKADDIVNAVV-------------RIIAAAVTIVVVAIPEGLPL 397
Query: 359 GLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATD-- 416
+ + LAY+ K++ +A R L C ++G T ICT KT L+L+ + + W+ D
Sbjct: 398 AVTLTLAYSMKRMMADQAMVRRLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQDPI 457
Query: 417 -NSFIKSTSADVLDALREAIATTS------------YDEAAVDDDDALLLWAKEFLDVDG 463
+ S + DVL +++ +A + Y+ + + A+L WA L++D
Sbjct: 458 QENASSSIATDVLKLIQQGVALNTTGSIYRATSGSKYEFSGSPTEKAILSWAVLELNMDM 517
Query: 464 DKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDR 520
+++KQ CT VEAFN K ++G+ L+ + DN VH+HW+G+ E+IL MC+ Y D
Sbjct: 518 EELKQTCTILRVEAFNSEKKQSGVALR-----NKADNKVHVHWKGAAEMILEMCSTYYDA 572
Query: 521 HGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIE----LTECGLT 576
G+++ L +R F I+ + A+ SLRCI+FA ++ ++ E EI E L E LT
Sbjct: 573 SGSMRDLGHVERTTFEQIIQGMAAS--SLRCIAFAHNQLPEE-EHEIREATQKLKEDSLT 629
Query: 577 WLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHS 636
+GLV +K V++A+EDC+ AG+ +K+I D+I AR IA G IL+P +D +
Sbjct: 630 LIGLVGIKDPCRPGVRKAVEDCQH-AGVNVKMITGDNIFTARAIATECG-ILRPD-QDMN 686
Query: 637 NGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMST 696
N AV+E VF + + R VD +RVMA +SP DKLLMVQCLKQKG VVAVTG T
Sbjct: 687 N---EAVVEGEVFWQYTPDERMEKVDKIRVMARSSPFDKLLMVQCLKQKGHVVAVTGDGT 743
Query: 697 RDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLH 756
DAP+LKEAD+G+S+G + + A++ SDI+ILD+NF ++A L+WGRCV NNI+KFIQ
Sbjct: 744 NDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGRCVYNNIQKFIQFQ 803
Query: 757 LTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA--PVSLRVQLPAHAT 814
LTVN AA +N VAA+ GEIPL QLLWVNLIMD LGALALA P ++ P
Sbjct: 804 LTVNVAALVINFVAAVSAGEIPLTAVQLLWVNLIMDTLGALALATEQPTKELMEKP---- 859
Query: 815 AAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQ 874
PL + +WRN++ Q LYQ+ VL Q KG + V D ++FN+FVLCQ
Sbjct: 860 PMGRTEPLISNIMWRNLLAQALYQIAVLLTLQFKGESIFGVSKKVKD--TLIFNTFVLCQ 917
Query: 875 VFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWC 934
VF NARE+E IF KGLH+N FL I+G IL + ++E + R+D W
Sbjct: 918 VFNEFNARELEKKTIF--KGLHKNKLFLGIIGITIILQVVMVEFLKKFADTERLDWGQWG 975
Query: 935 VCIGIAVMTLPTGLVAKCIPM 955
CIGIA + P G V K IP+
Sbjct: 976 ACIGIAAASWPIGWVVKSIPV 996
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255552023|ref|XP_002517056.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223543691|gb|EEF45219.1| cation-transporting atpase plant, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 362/980 (36%), Positives = 551/980 (56%), Gaps = 78/980 (7%)
Query: 8 EFRRFSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFG 67
+F F I + L + S+ + G + +A+++ETN + GI G ++ RR++ FG
Sbjct: 69 DFTTFKINHACLTDLVKEKSHQQLQKLGGVAGVASAVETNTEGGIFGGVEDIARRQEAFG 128
Query: 68 SNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDG 127
SN K P + F + ++ KD T+ +LL CA LSL GIK +G ++G DG
Sbjct: 129 SN--------TYKKPPTKSFFYFVVEAFKDLTIAILLGCAALSLGFGIKEHGLKEGWYDG 180
Query: 128 AMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDV 187
+FV + V+ +S++ + +N + L + S + V+R GR Q+++ E+VVGDV
Sbjct: 181 GSIFVAVFLVIAVSAVSNYRQNRQFDKL--SKVSNNIQIDVVRGGRRLQLSIFELVVGDV 238
Query: 188 VCLQTGDQVPADGLFVHGKNLKLDDGD------------DKLPCIFTGAKVVGGECSMLV 235
VCL+ GDQVPADGLF+ G +L++D+ + P +F+G KV G MLV
Sbjct: 239 VCLKIGDQVPADGLFIDGHSLQIDESSMTGESDHVEVNSHQNPFLFSGTKVADGYGRMLV 298
Query: 236 TSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVL 295
TSVG NT +M +S+D +++ LQ ++++ S + K+ L+++ LV+VV ++
Sbjct: 299 TSVGMNTTWGEMMSHISRDTN------EQTPLQARLNKLTSSIGKVGLAVAFLVLVVLLV 352
Query: 296 GCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGL 355
F D + + ST + + V + E L
Sbjct: 353 RYFTGNTQDENGNREFNGSSTKADDIVNAVVGIVAAAVTIVVVAIPEGL----------- 401
Query: 356 LPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIAT 415
P+ + + LAY+ K++ +A R L C ++G T ICT KT L+++ + + W+
Sbjct: 402 -PLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTMNLMKVTKFWLGQ 460
Query: 416 DNSFIKST-SADVLDALREAIA------------TTSYDEAAVDDDDALLLWAKEFLDVD 462
S+ S VLD +R+ +A + ++ + + A+L WA L++D
Sbjct: 461 AEQITSSSISPYVLDLIRQGVALNTTGSAYRAHAQSEFEFSGSPTEKAILSWAILDLEMD 520
Query: 463 GDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLD 519
++ KQ+CT VEAFN K R+G+ ++ D+++H+ W+G+ E+IL+MCT Y D
Sbjct: 521 MEEQKQSCTILQVEAFNSQKKRSGVSIR-----KKLDSTIHVQWKGAAEMILAMCTSYYD 575
Query: 520 RHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIE---LTECGLT 576
G ++ LD+++R F I+++ A SLRCI+FA ++ ++ E I+ L E GLT
Sbjct: 576 ACGIVKELDDNERTVFKQIIQEMAA--ESLRCIAFAHAQISEEQYEAGIQDKKLKENGLT 633
Query: 577 WLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHS 636
LGLV +K VK+A+EDC+ AG+ IK+I D++ AR IA+ G ILKPG
Sbjct: 634 LLGLVGIKDPCRPGVKKAVEDCQH-AGVSIKMITGDNVFTARAIALECG-ILKPG----Q 687
Query: 637 NGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMST 696
+ + AV+E FR+ + E R VD + VMA +SP DKLLMVQCLKQKG+VVAVTG T
Sbjct: 688 DMFSGAVVEGEEFRNYTHEERMEKVDQICVMARSSPFDKLLMVQCLKQKGQVVAVTGDGT 747
Query: 697 RDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLH 756
DAP+LKEAD+G+S+G + + A++ SDIVILD+NF ++A L+WGRCV NNI+KFIQ
Sbjct: 748 NDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLRWGRCVYNNIQKFIQFQ 807
Query: 757 LTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQLPAHATAA 816
LTVN AA +N VAA+ GE+PL QLLWVNLIMD LGALALA + +
Sbjct: 808 LTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEQPTKELMDKK--PV 865
Query: 817 ASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVF 876
PL +W+N++ Q YQ+ VL Q KG + V D ++FN+FVLCQVF
Sbjct: 866 GRTEPLITNIMWKNLLAQAFYQIAVLLTLQFKGKSIFGVTEEVKD--TLIFNTFVLCQVF 923
Query: 877 VLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVC 936
NAR++E N+F KG+H+N FL I+G +L + ++E + R++ W C
Sbjct: 924 NEFNARKLEKKNVF--KGIHKNKLFLGIIGVTIVLQVLMVEFLKKFADTERLNWGQWGAC 981
Query: 937 IGIAVMTLPTGLVAKCIPMP 956
IG+A +T P G + K IP+P
Sbjct: 982 IGMATLTWPIGWLVKFIPVP 1001
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432838|ref|XP_002279864.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 607 bits (1565), Expect = e-170, Method: Compositional matrix adjust.
Identities = 368/978 (37%), Positives = 571/978 (58%), Gaps = 85/978 (8%)
Query: 13 SIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLT 72
SI+Q T+ ++ + + +SG ++ +A +LET++ GISG ++ R++ FGSN
Sbjct: 74 SIDQTTLTEIVKEKNLKLLLESGGVEGVADALETDIKNGISGAVDDVALRQEAFGSN--- 130
Query: 73 LSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFV 132
K P + + ++ KD T+++LL CA LSL GIK +G ++G DG +FV
Sbjct: 131 -----TYKRPPTKSLFHFVVEAFKDLTILILLFCAALSLGFGIKEHGLKEGWYDGGSIFV 185
Query: 133 VISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQT 192
+ V+ +S++ F +N E L + S + V R+GR +QI++ E+VVGDVV L+
Sbjct: 186 AVILVISVSAVSNFRQNRQFEKL--SKVSNNIKIDVFRNGRRQQISIFEIVVGDVVSLKI 243
Query: 193 GDQVPADGLFVHGKNLKLDDGD------------DKLPCIFTGAKVVGGECSMLVTSVGE 240
GDQVPADGLF+ G +L++D+ P +F+G KV G MLVTSVG
Sbjct: 244 GDQVPADGLFLDGHSLQVDESSMTGESDHVEVNSSHNPFLFSGTKVADGYAQMLVTSVGM 303
Query: 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAW 300
NT +M +S+D +++ LQ ++++ S + K L+++ LV++V ++ F
Sbjct: 304 NTTWGQMMSTISRDTN------EQTPLQARLNKLTSSIGKAGLAVAFLVLLVLLVRYFTG 357
Query: 301 GDDDHDPEPK-GGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIG 359
+D + + G ++ +I+ VV AT+ ++I+V +GL P+
Sbjct: 358 NTEDENGNQEFNGSKTKADDIVNAVVEII-----ATA-------VTIVVVAIPEGL-PLA 404
Query: 360 LFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSF 419
+ + LAY+ K++ +A R L C ++G T ICT KT L+++ + ++W+ +
Sbjct: 405 VTLTLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTMNQMKVTKIWLGQEPIE 464
Query: 420 IKST-SADVLDALREAIA-------------TTSYDEAAVDDDDALLLWAKEFLDVDGDK 465
+ S+ S ++L+ +++ +A + ++ + A+L WA LD+D +
Sbjct: 465 VSSSISENLLNLIQQGVALNTTGSVYRATSGSYKFEFFGSPTEKAILSWAVLELDMDMEI 524
Query: 466 MKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHG 522
+KQNCT VEAFN K R+G+ ++ S DN++H+HW+G+ E+IL+MC+ Y D G
Sbjct: 525 LKQNCTILHVEAFNSEKKRSGVSIR-----SKADNTIHVHWKGAAEMILAMCSSYYDASG 579
Query: 523 TLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRV-EQQNE--EEIIELTECGLTWLG 579
+++ LD+ +R F I+ + A+ SLRCI+FA K++ E+++E E +L E GL ++G
Sbjct: 580 SMKDLDDCERKTFEQIIQGMAAS--SLRCIAFAHKQILEEEHEIREATQKLKEDGLAFVG 637
Query: 580 LVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGY 639
LV +K V++A+EDC+ AG+ +K+I D++ AR IA G IL+P +
Sbjct: 638 LVGIKDPCRPGVRKAVEDCQH-AGVNVKMITGDNVFTARAIATECG-ILRPDQGIN---- 691
Query: 640 DAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDA 699
+ AV+E VFR+ + E R VD +RVMA +SP DKLLMVQCLKQ G VVAVTG T DA
Sbjct: 692 NEAVVEGEVFRNYTPEERMEKVDKIRVMARSSPFDKLLMVQCLKQNGHVVAVTGDGTNDA 751
Query: 700 PSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTV 759
P+LKEAD+G+S+G + + A++ SDI+ILD+NF ++A L+WGRCV NNI+KFIQ LTV
Sbjct: 752 PALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGRCVYNNIQKFIQFQLTV 811
Query: 760 NAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA--PVSLRVQLPAHATAAA 817
N AA +N VAA+ GE+PL QLLWVNLIMD LGALALA P + + P
Sbjct: 812 NVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEQPTNELMDRP----PVG 867
Query: 818 SASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFV 877
PL +WRN++ Q +YQ+ VL Q KG + V D ++FN+FVLCQVF
Sbjct: 868 RTGPLITNIMWRNLLAQAMYQIAVLLTLQFKGESIFGVSEKVKD--TLIFNTFVLCQVFN 925
Query: 878 LINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCI 937
NAR +E N+FE G+H+N FL I+G IL + ++E + R++ W C+
Sbjct: 926 EFNARRLEKKNVFE--GIHKNKLFLGIIGITIILQVVMVEFLKKFADTERLNWGQWGACL 983
Query: 938 GIAVMTLPTGLVAKCIPM 955
GIA ++ P G V KCIP+
Sbjct: 984 GIAAVSWPLGWVVKCIPV 1001
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432836|ref|XP_002279818.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 362/977 (37%), Positives = 556/977 (56%), Gaps = 84/977 (8%)
Query: 13 SIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLT 72
+I+ ++ + + S + G ++ +A +L+T+ GI G ++ R++ FGSN
Sbjct: 74 NIDHTSLTAVVKEKSLDQLRELGGVEGVADALKTHTKNGIHGAVEDVAERQETFGSN--- 130
Query: 73 LSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFV 132
P + F + ++ KD T+++LL CATLSL GIK +G ++G DG +FV
Sbjct: 131 -----TYPRPPTKSFFYFVLEAFKDLTILILLACATLSLGFGIKEHGLKEGWYDGGSIFV 185
Query: 133 VISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQT 192
+ V+ +S++ F +N +L + S V+V+RDG ++I++ +VVGDV CL+
Sbjct: 186 AVFLVISVSAVSNFRQN--RQLETLSKVSNNIEVEVVRDGHRQKISIFGIVVGDVACLKI 243
Query: 193 GDQVPADGLFVHGKNLKLDDGD------------DKLPCIFTGAKVVGGECSMLVTSVGE 240
GDQVPADGLF+ G +L++D+ + P +F+G KV G MLVTSVG
Sbjct: 244 GDQVPADGLFLAGHSLQVDESSMTGESDHVEINSSQNPFLFSGTKVADGYAQMLVTSVGM 303
Query: 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAW 300
NT +M +S D+ +++ LQ ++++ S + K+ L+++ LV+V+ V+ F
Sbjct: 304 NTTWGEMMSTISHDNN------EQTPLQARLNKLTSSIGKVGLAVAFLVLVMLVVRYFTG 357
Query: 301 GDDDHDPEPK-GGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIG 359
+D + + G ++ +I+ +V R + +V V+ LP+
Sbjct: 358 NTEDENGNQEFNGSKTKADDIVNAMV-------------RIIAAAVTIVVVAIPEGLPLA 404
Query: 360 LFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIAT---- 415
+ + LAY+ K++ +A R L C ++G T ICT KT L+L+ + + W+
Sbjct: 405 VTLTLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKYWLGKEPVE 464
Query: 416 DNSFI---------KSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKM 466
D+S I + + + ++ A + + ++ + + ALL WA LD+D +++
Sbjct: 465 DSSSIATNILKLIQQGVALNTTGSIYRATSKSEFEFSGSPTEKALLSWAVLELDMDMERL 524
Query: 467 KQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGT 523
KQN T VEAFN K R+G+L++ DN +H+HW+G+ E+IL+MC+ Y D G+
Sbjct: 525 KQNYTILHVEAFNSEKKRSGILMR-----KKADNKIHVHWKGAAEMILAMCSSYYDASGS 579
Query: 524 LQTLDEHKRDAFNNFIRDIEANHHSLRCISFA---CKRVEQQNEEEIIELTECGLTWLGL 580
++ LD+ +R F I+ + A+ SLRCI+FA EQ+ E +L E LT +GL
Sbjct: 580 MKELDDGERMTFEQIIQGMAAS--SLRCIAFAHEQIPEEEQEIREGRQKLKEDSLTLIGL 637
Query: 581 VRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYD 640
V +K V++A+EDC + AG+ +K+I D++ AR IA G IL+P + +S
Sbjct: 638 VGIKDPCRPGVRKAVEDC-QYAGVNVKMITGDNVFTARAIATECG-ILRPDQDMNSE--- 692
Query: 641 AAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAP 700
AV+E +FR + E R VD + VMA +SP DKLLMVQCLKQKG VVAVTG T DAP
Sbjct: 693 -AVVEGEIFRKYTSEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAP 751
Query: 701 SLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVN 760
+LKEAD+G+S+G + + A++ SDI+ILD+NF ++A L+WGRCV +NI+KFIQ LTVN
Sbjct: 752 ALKEADIGLSMGIQGTEVAKEGSDIIILDDNFASVATVLRWGRCVYDNIQKFIQFQLTVN 811
Query: 761 AAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA--PVSLRVQLPAHATAAAS 818
AA +N VAA+ GE+PL QLLWVNLIMD LGALALA P ++ P
Sbjct: 812 VAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEQPTKELMEKP----PMGR 867
Query: 819 ASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVL 878
PL + +WRN++ Q LYQ+ +L Q KG + V D ++FN+FVLCQVF
Sbjct: 868 KEPLISNVMWRNLLAQALYQIAILLTLQFKGRSIFGVSEKVKD--TLIFNTFVLCQVFNE 925
Query: 879 INAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIG 938
NAR++E N+F KGLH+N FL I+G IL + ++E + R+D W CIG
Sbjct: 926 FNARKLEKKNVF--KGLHKNKLFLGIIGITIILQVVMVEFLKKFADTERLDWGQWGACIG 983
Query: 939 IAVMTLPTGLVAKCIPM 955
IA + P G V KCIP+
Sbjct: 984 IAAASWPIGWVVKCIPV 1000
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147790888|emb|CAN63793.1| hypothetical protein VITISV_002789 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 365/976 (37%), Positives = 551/976 (56%), Gaps = 88/976 (9%)
Query: 13 SIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLT 72
++ Q + ++ + Q G ++ +AA L TN GI G E +L RR VFGSN T
Sbjct: 84 NVGQRMLTEMVRDKDLERLRQFGGVKQLAALLGTNEKNGIDGHEADLIHRRNVFGSNEYT 143
Query: 73 LSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFV 132
P F + ++ KD+T+I+LL CA LSL GIK G +G DG + V
Sbjct: 144 --------KPPKKGFLSFVVEASKDTTIIILLICAALSLGFGIKEEGPREGWYDGGSIIV 195
Query: 133 VISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQT 192
I +V +SS+ F ++ S+ + R V+V+R GR + +++ ++VVGD+V L
Sbjct: 196 AILLIVAVSSISNFRQSGQFHKFSSESSDIR--VQVVRQGRRQPVSIFQLVVGDIVFLNI 253
Query: 193 GDQVPADGLFVHGKNLKLDDG------------DDKLPCIFTGAKVVGGECSMLVTSVGE 240
GDQVPADGLF+ G +LK+D+ + + P +F+G KV G +MLVTSVG
Sbjct: 254 GDQVPADGLFMEGHSLKVDESSMTGESDHVEINEKENPFMFSGTKVSDGFGTMLVTSVGM 313
Query: 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAW 300
NT +M I R+ +++ LQ +D++ S + K+ L+++L+V+VV + F
Sbjct: 314 NTAWGEMMS------SIRRELDEQTPLQARLDKLASTIGKLGLAVALIVLVVLFIRYFTG 367
Query: 301 G-DDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIG 359
+DD G ++ + ++M VV + ++ILV +GL P+
Sbjct: 368 NIEDDSGNREFNGSKTKIDDVMNSVV------------HLVSAAVTILVIAIPEGL-PMA 414
Query: 360 LFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATD--- 416
+ + LAY+ +++ +A R L C ++G VT ICT KT L+L+ + E W+ ++
Sbjct: 415 VTLTLAYSMRRMMTDQALVRKLSACETMGSVTTICTDKTGTLTLNKMKVVEFWLESEVIK 474
Query: 417 NSFIKSTSADVLDALREAIA-----------TTSYDE-AAVDDDDALLLWAKEFLDVDGD 464
+ + + VL+ L++ + +TS E + + A+L WA L +D D
Sbjct: 475 DETYRGVAPTVLELLKQGVGLNTTGSVCKLPSTSVPEISGSPTESAILTWALVDLGMDID 534
Query: 465 KMK---QNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRH 521
+ K + VEAFN K R+G+L+ DN++HIHW+G+ E+IL+MC+HY D+
Sbjct: 535 EQKLSFEILHVEAFNSQKKRSGVLV-----NRIADNTIHIHWKGAAEMILAMCSHYYDKS 589
Query: 522 GTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLV 581
G ++ +D+ KR F IRD+ A SLRCI+FA K+ Q+ +L E G+ LGLV
Sbjct: 590 GIVKVMDDKKRGQFGGLIRDMAAK--SLRCIAFAYKQALQE------KLEETGMILLGLV 641
Query: 582 RLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDA 641
LK V++A+E CR+ AG+ +K+I D+I A+ IA+ G ILKP ED +N
Sbjct: 642 GLKDPCRPGVRRAVEVCRD-AGVNVKMITGDNIFTAKAIAMECG-ILKPD-EDFNN---- 694
Query: 642 AVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPS 701
AV+E FR+ S R +D +RVMA +SP DKLLMVQ LK+KG VVAVTG T DAP+
Sbjct: 695 AVVEGVTFRNYSHRERMDKIDIIRVMARSSPFDKLLMVQSLKKKGHVVAVTGDGTNDAPA 754
Query: 702 LKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNA 761
LKEAD+G+S+G + + A++ SDIVILD+NFT++ +KWGRCV NN++KFIQ LT+N
Sbjct: 755 LKEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVMKWGRCVYNNLQKFIQFQLTINV 814
Query: 762 AAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA--PVSLRVQLPAHATAAASA 819
AA +N VAA+ G++PL QLLWVNLI D GALALA P + + P +
Sbjct: 815 AALGINFVAAVASGKVPLTAVQLLWVNLIQDTFGALALATEQPTNDLLMKP----PVGRS 870
Query: 820 SPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLI 879
PL +WRN+I Q LYQ+ VL Q KG+ + V + ++FN+FVLCQVF
Sbjct: 871 KPLITNVMWRNLISQALYQISVLLILQYKGSSIFGVDEKINN--TLIFNTFVLCQVFNEF 928
Query: 880 NAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGI 939
NAR ++ N F KG+ +N F+ I+G L + ++E + + R+D W VCIG+
Sbjct: 929 NARNMDKKNKFFFKGILKNRLFVGIIGITIALQVVMVEFLKRFANTERLDWGQWGVCIGL 988
Query: 940 AVMTLPTGLVAKCIPM 955
A ++ P + K +P+
Sbjct: 989 AALSWPIDWLVKYLPV 1004
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432819|ref|XP_002279498.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 600 bits (1547), Expect = e-168, Method: Compositional matrix adjust.
Identities = 359/975 (36%), Positives = 553/975 (56%), Gaps = 83/975 (8%)
Query: 14 IEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTL 73
I+Q ++ L + + + ++ +A +L+ ++ GI G ++ RR++ FGSN
Sbjct: 134 IDQTSLTALVKEKNLDQLLELRGVEGVAEALKADIKNGIHGDVKDVARRKEEFGSN---- 189
Query: 74 SLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVV 133
+ P + F + ++ KD T+++LL CATLS+ GIK +G ++G DG +F+
Sbjct: 190 ----TYQKPPTKSFLHFVVEAFKDLTILVLLACATLSVGFGIKEHGVKEGWYDGGSIFLA 245
Query: 134 ISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTG 193
I V+ +S++ F +N + L + S V V+R GR++QI++ E+VVGDVVCL+ G
Sbjct: 246 IFLVISVSAVINFKQNRQFDKL--SKASNNIQVDVVRHGRLQQISIFEIVVGDVVCLKIG 303
Query: 194 DQVPADGLFVHGKNLKLDDG-----DDKL-------PCIFTGAKVVGGECSMLVTSVGEN 241
DQVPADGLF+ G +L++D+ +D + P +F+G KV G MLVTSVG N
Sbjct: 304 DQVPADGLFLDGHSLQVDESSMTGENDHVEVNTSLNPFLFSGTKVADGYARMLVTSVGMN 363
Query: 242 TETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWG 301
T +M +S D +++ LQ ++++ S + K L+ + LV+V+ ++ F
Sbjct: 364 TTWGEMMSTISHDAN------EQTPLQARLNKLTSSIGKFGLAAAFLVLVLLLVRYFTGN 417
Query: 302 DDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLF 361
D + + T G++V + A ++I+V +GL P+ +
Sbjct: 418 TKDENGNQEFNASKTKA---GDIVNAVVGIIAAA--------ITIVVVAIPEGL-PLAVT 465
Query: 362 ICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDN-SFI 420
+ L Y+ K++ + R L C ++G T ICT KT L+L+ + + W+
Sbjct: 466 LTLGYSMKRMMADQVMVRKLSACETMGFATIICTDKTGTLTLNQMKVTKFWLGKQPIEAA 525
Query: 421 KSTSADVLDALREAIA------------TTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQ 468
S + D+L+ +R+ +A ++ ++ + + A+L WA L +D ++MK+
Sbjct: 526 SSIATDLLELIRQGVALNTTGSIYREPSSSKFEFSGSPTEKAILSWAVLELGMDMERMKK 585
Query: 469 NCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQ 525
N T VEAFN K R+G+L++ DN++H HW+G+ E+IL+MC+ Y D G+++
Sbjct: 586 NYTILHVEAFNSEKKRSGILIR-----KKADNTIHAHWKGAAEMILAMCSSYYDASGSMK 640
Query: 526 TLDEHKRDAFNNFIRDIEANHHSLRCISFACKRV---EQQNEEEIIELTECGLTWLGLVR 582
LD+ KR F I+ A+ SLRC++FA K++ EQ+ E + +L E LT + LV
Sbjct: 641 DLDDGKRMTFEQTIQGTAAS--SLRCMAFAHKQIRKEEQEIGEGLQKLKEDSLTLIALVG 698
Query: 583 LKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAA 642
+K V++A+EDC + AG+ +K+I D+I AR +A G IL+PG E S A
Sbjct: 699 IKDPCRPGVRKAVEDC-QYAGVNVKMITGDNIFTARAMATECG-ILRPGQEMDSE----A 752
Query: 643 VIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSL 702
V+E VFR +EE R VD + VMA +SP DKLLMV+CLK+KG VVAVTG T DAP+L
Sbjct: 753 VVEGEVFRQYTEEERMEHVDKILVMAGSSPFDKLLMVECLKKKGHVVAVTGDGTNDAPAL 812
Query: 703 KEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAA 762
+EAD+G+S+G + + A++ SDI+ILD+NF ++A L+WGRCV NNI+KFIQ LT+N A
Sbjct: 813 QEADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGRCVYNNIQKFIQFQLTLNVA 872
Query: 763 AFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA--PVSLRVQLPAHATAAASAS 820
A +N VAA E+PL F LLW+NL+MD LG LALA P ++ P A
Sbjct: 873 ALVINCVAAASTAEVPLTAFHLLWMNLVMDTLGVLALATDRPTKELMEKP----PVGRAE 928
Query: 821 PLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLIN 880
PL +WRN++ Q LYQ+ VL KG + V K L +FN+ VLCQVF N
Sbjct: 929 PLITNIMWRNLLAQALYQIVVLLTLHFKGQSIFGVNKEKDTL---IFNTSVLCQVFNEFN 985
Query: 881 AREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGIA 940
ARE+E N+FE G+H+N FL IVG IL + ++E + R+D W CIG+A
Sbjct: 986 ARELEKKNVFE--GIHKNKLFLGIVGLAIILQVVMVEFLNKFADTERLDWGQWVACIGVA 1043
Query: 941 VMTLPTGLVAKCIPM 955
+ P G + KCIP+
Sbjct: 1044 AASWPIGWLVKCIPV 1058
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255542300|ref|XP_002512213.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223548174|gb|EEF49665.1| cation-transporting atpase plant, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 367/979 (37%), Positives = 553/979 (56%), Gaps = 89/979 (9%)
Query: 14 IEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTL 73
++ T+ + +N S + HQ G + + A L ++ GIS E +L RR+VFG+N
Sbjct: 70 VDHNTLIDMVKNRSLESLHQLGGAKQVVAILLSDAKEGISDNEADLAHRREVFGAN---- 125
Query: 74 SLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVV 133
+ P + F + +++KDST+I+L C+ LSL GIK++G + G DG + V
Sbjct: 126 ----RYQKPPTKSFFSFVFEALKDSTMIILSVCSVLSLGFGIKQHGPKDGWYDGGSIIVA 181
Query: 134 ISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTG 193
I V+ +SS+ F ++ E L S V+V+RDGR I++ ++VVGDV+ L+ G
Sbjct: 182 IVLVIAVSSVSNFKQSKQFEKL--SDVSNDIKVRVVRDGRHHSISIFDIVVGDVISLKIG 239
Query: 194 DQVPADGLFVHGKNLKLDDGD------------DKLPCIFTGAKVVGGECSMLVTSVGEN 241
DQ+PADGLF+ G +LKLD+ + P + +G KV+ G SM+VTSVG N
Sbjct: 240 DQIPADGLFLDGYSLKLDESSMTGESEHVEVDGHRNPFVLSGTKVIDGFGSMIVTSVGMN 299
Query: 242 TETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWG 301
T +M L+ + +++ LQ + + S + K+ LS+++LV+ V ++ F
Sbjct: 300 TAWGEMMSSLTSNLE------EQTPLQARLSELASYIGKVGLSVAILVLAVLMIRYFTGS 353
Query: 302 DDDHDPEPK-GGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGL 360
D + + + G ++ V +++ VV ++ILV +GL P+ +
Sbjct: 354 TRDENGQREFNGSKTKVSDVLNSVV------------GIVAAAVTILVVAIPEGL-PLSV 400
Query: 361 FICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFI 420
+ LAY+ K++ A R L C ++G T ICT KT L+L+ + E W+ + S
Sbjct: 401 TLTLAYSMKRMMKDNAMVRKLSACETMGSATTICTDKTGTLTLNQMKVIEFWLGKE-SIE 459
Query: 421 KSTSADVLDA----LREAIA-----TTSYDEAAVD-------DDDALLLWAKEFLDVDGD 464
TS+ + A L+E IA T ++D + A+L WA L +
Sbjct: 460 DGTSSKIEPAIYELLQEGIALNTTGTVGKSHTSLDAEISGSPTEKAILSWAVFDLGIKII 519
Query: 465 KMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRH 521
+ K NC VEAFN K R+G+ ++ D ++H HW+G+ E+IL+MC++Y R+
Sbjct: 520 ETKLNCKIIHVEAFNSEKKRSGVWMR-----KSNDKTIHTHWKGAAEMILAMCSNYYLRN 574
Query: 522 GTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEII-ELTECGLTWLGL 580
G ++ ++ R F I+ + A SLRCI+FA K+++ + +E+ E E T +G+
Sbjct: 575 GAVKAMNRDDRLQFETIIQSMAAK--SLRCIAFAHKKLKADDRKELSKEPEETEFTLMGI 632
Query: 581 VRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYD 640
V LK V AIE C++ AG+ +K+I D+++ AR +AI G IL P ED D
Sbjct: 633 VGLKDPCRPGVSAAIESCKK-AGVIVKMITGDNLHTARTVAIECG-ILSP--EDD---MD 685
Query: 641 AAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAP 700
AV+E FR+ S E R+ +D +RVMA +SP DKLLMVQCLKQKG VV VTG T DAP
Sbjct: 686 RAVVEGVQFRNFSPEDRTSKIDEIRVMARSSPFDKLLMVQCLKQKGHVVGVTGDGTNDAP 745
Query: 701 SLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVN 760
+LKEAD+G+++G + + A++ +DI+ILD+NF+++ L+WGRCV +NI+KF+Q LTVN
Sbjct: 746 ALKEADIGLAMGIQGTEVAKESADIIILDDNFSSVVTVLQWGRCVYSNIQKFLQFQLTVN 805
Query: 761 AAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA--PVS-LRVQLPAHATAAA 817
AA +N AA+ GE+PL QLLWVNLIMD LGAL LA P S L + P
Sbjct: 806 VAALVINFAAAVSSGEVPLTAVQLLWVNLIMDTLGALGLATEQPTSDLMEKKP-----VG 860
Query: 818 SASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFV 877
PL K +WRN+I Q LYQV +L A Q K + V N+ I+FN+FVLCQVF
Sbjct: 861 RWEPLITKIMWRNLIAQALYQVAILLALQFKAQSIFGV--NEKVKNTIIFNTFVLCQVFN 918
Query: 878 LINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCI 937
N+R +E NIF KG+H+N FLVI+G +L + ++E++T R++ W CI
Sbjct: 919 EFNSRNMEKKNIF--KGIHRNKLFLVIIGITILLQVLMVELLTRFASTERLNWGQWGACI 976
Query: 938 GIAVMTLPTGLVAKCIPMP 956
GIA +T P G + KCIP+P
Sbjct: 977 GIAALTWPIGFLVKCIPVP 995
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 956 | ||||||
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.929 | 0.860 | 0.337 | 5.2e-129 | |
| TAIR|locus:2084578 | 1017 | AT3G22910 [Arabidopsis thalian | 0.943 | 0.886 | 0.326 | 2.3e-126 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.936 | 0.837 | 0.311 | 1.1e-112 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.619 | 0.545 | 0.332 | 1.3e-111 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.939 | 0.836 | 0.300 | 1e-107 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.449 | 0.417 | 0.326 | 4.9e-91 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.460 | 0.429 | 0.329 | 1.3e-88 | |
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.456 | 0.427 | 0.323 | 8.6e-86 | |
| DICTYBASE|DDB_G0289473 | 1077 | DDB_G0289473 "Ca2+-ATPase" [Di | 0.482 | 0.428 | 0.352 | 5.3e-85 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.457 | 0.430 | 0.331 | 7.3e-83 |
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1266 (450.7 bits), Expect = 5.2e-129, P = 5.2e-129
Identities = 329/974 (33%), Positives = 494/974 (50%)
Query: 13 SIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLT 72
+I+QE + ++ + G ++ +AASL TN GI G E E+ RRR +FGSN
Sbjct: 87 AIDQEQLVEIMKGKDLPGIQALGGVEGVAASLRTNPTKGIHGNEQEVSRRRDLFGSNTY- 145
Query: 73 LSLENNCKHPASLHFGRLISDSIKDSTVIXXXXXXXXXXXXGIKRNGFEQGILDGAMVFX 132
+ P L F + ++ KD T++ GIK +G ++G +G +F
Sbjct: 146 -----HKPPPKGLLF--FVYEAFKDLTILILLVCAIFSLGFGIKEHGIKEGWYEGGSIFV 198
Query: 133 XXXXXXXXXXLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQT 192
L F + + L + S V+V+RD R + I++ +VVVGDVV L+
Sbjct: 199 AVFLVIVVSALSNFRQERQFDKL--SKISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKI 256
Query: 193 GDQVPADGLFV--HXXXXXXXXXXXXX----------PCIFTGAKVVGGECSMLVTSVGE 240
GDQ+PADGLF+ H P +F+G K+V G MLV SVG
Sbjct: 257 GDQIPADGLFLEGHSLQVDESSMTGESDHLEVDHKDNPFLFSGTKIVDGFAQMLVVSVGM 316
Query: 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWXXXXXXXXXXXXXGCFAW 300
+T M IN+ + + LQ+ +D + S + KI F
Sbjct: 317 STTWGQTMS------SINQDSSERTPLQVRLDTLTSTIGKIGLTVAALVLVVLLVRYFTG 370
Query: 301 GDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGL 360
+ G ++ V ++ VV R A + ++I+V +GL P+ +
Sbjct: 371 NTEKEGKREYNGSKTPVDTVVNSVV-----RIVAAA-------VTIVVVAIPEGL-PLAV 417
Query: 361 FICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFI 420
+ LAY+ K++ +A R L C ++G T ICT KT L+L+ + + W+ ++
Sbjct: 418 TLTLAYSMKRMMSDQAMVRKLSACETMGSATVICTDKTGTLTLNEMKVTKFWLGQESIHE 477
Query: 421 KST---SADVLDALREA--IATTSYXXXXXXXXX----------XXXXWAKEFLDVDGDK 465
ST S DVLD L + + TT W L +D +
Sbjct: 478 DSTKMISPDVLDLLYQGTGLNTTGSVCVSDSGSTPEFSGSPTEKALLSWTVLNLGMDMES 537
Query: 466 MKQN---CTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHG 522
+KQ VE F+ +K R+G+L++ DN+VH+HW+G+ E++L+MC+HY G
Sbjct: 538 VKQKHEVLRVETFSSAKKRSGVLVR-----RKSDNTVHVHWKGAAEMVLAMCSHYYTSTG 592
Query: 523 TLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVR 582
++ +D + I+ + A+ SLRCI+FA K + + ++E E GLT +G+V
Sbjct: 593 SVDLMDSTAKSRIQAIIQGMAAS--SLRCIAFAHKIA---SNDSVLE--EDGLTLMGIVG 645
Query: 583 LKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSN-GYDA 641
LK V +A+E C+ AG+ IK+I D++ A+ IA G++ DH++ +
Sbjct: 646 LKDPCRPGVSKAVETCK-LAGVTIKMITGDNVFTAKAIAFECGIL------DHNDKDEED 698
Query: 642 AVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPS 701
AV+E FR+ ++E R VD +RVMA +SP DKLLMV+CL+ KG VVAVTG T DAP+
Sbjct: 699 AVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLKGHVVAVTGDGTNDAPA 758
Query: 702 LKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTXXX 761
LKEAD+G+S+G + + A++ SDIVILD+NF ++A LKWGRCV NNI+KFIQ LT
Sbjct: 759 LKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNV 818
Query: 762 XXXXXXXXXXIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQXXXXXXXXXXXXX 821
I GE+PL QLLWVNLIMD LGALALA +
Sbjct: 819 AALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTN-ELLKRKPVGRTEAL 877
Query: 822 XXNKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLINA 881
N +WRN+++Q LYQ+ VL Q KG + V+ D ++FN+FVLCQVF NA
Sbjct: 878 ITN-VMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEVKD--TLIFNTFVLCQVFNEFNA 934
Query: 882 REIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGIAV 941
RE+E N+F KGLH+N F+ I+ +L + ++E + R++ W CI +A
Sbjct: 935 REMEKKNVF--KGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQWGTCIALAS 992
Query: 942 MTLPTGLVAKCIPM 955
++ P G K IP+
Sbjct: 993 LSWPIGFFTKFIPV 1006
|
|
| TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1241 (441.9 bits), Expect = 2.3e-126, P = 2.3e-126
Identities = 315/966 (32%), Positives = 484/966 (50%)
Query: 12 FSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGL 71
F I+ ET+ L +N + G + ++L++N +GI+ + E++RRR FGSN
Sbjct: 81 FKIDTETLNDLVKNKNQEKLESLGGPNGLVSALKSNTRLGINEEGDEIQRRRSTFGSNTY 140
Query: 72 TLSLENNCKHPASLHFGRLISDSIKDSTVIXXXXXXXXXXXXGIKRNGFEQGILDGAMVF 131
T + P+ F + ++ KD T++ GIK +G ++G DG +F
Sbjct: 141 T-------RQPSKGLF-HFVVEAFKDLTILILLGCATLSLGFGIKEHGLKEGWYDGGSIF 192
Query: 132 XXXXXXXXXXXLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQ 191
+ F +N + L SK S + V+R+GR ++I++ ++VVGD+VCL
Sbjct: 193 VAVFLVVAVSAVSNFRQNRQFDKL-SK-VSSNIKIDVVRNGRRQEISIFDIVVGDIVCLN 250
Query: 192 TGDQVPADGLFVHXXXXXXXXXXXXXPCIFTGAKVVGGECSMLVTSV----GENTETSML 247
GDQVPADG+FV + G T + G+ TS+
Sbjct: 251 IGDQVPADGVFVEGHLLHVDESSMTGESDHVEVSLTGNTFLFSGTKIADGFGKMAVTSVG 310
Query: 248 MKLL--SKDDRINRQDYKESKLQISVDRMGSRMEKIWXXXXXXXXXXXXXGCFAWGDDDH 305
M I+R +++ LQ +D++ S + K+ F D
Sbjct: 311 MNTAWGQMMSHISRDTNEQTPLQSRLDKLTSSIGKVGLLVAFLVLLVLLIRYFTGTTKDE 370
Query: 306 DPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLA 365
+ ++T + E+V ++ A ++I+V +GL P+ + + LA
Sbjct: 371 SGNREYNGKTTKSD---EIVNAVVKMVAAA--------VTIIVVAIPEGL-PLAVTLTLA 418
Query: 366 YASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSA 425
Y+ K++ A R L C ++G T ICT KT L+L+ + + W ++ S S
Sbjct: 419 YSMKRMMKDNAMVRKLSACETMGSATVICTDKTGTLTLNQMKVTDFWFGLESGKASSVSQ 478
Query: 426 DVLDALREAIAT------------TSYXXXXXXXXXXXXXWAKEFLDVDGDKMKQN---C 470
V++ + +A T Y WA E L++ +K+ +
Sbjct: 479 RVVELFHQGVAMNTTGSVFKAKAGTEYEFSGSPTEKAILSWAVEELEMGMEKVIEEHDVV 538
Query: 471 TVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEH 530
VE FN K R+G+L+K G ++ N+V +HW+G+ E IL+MC+ + D G ++ + E
Sbjct: 539 HVEGFNSEKKRSGVLMKKKGVNTE--NNV-VHWKGAAEKILAMCSTFCDGSGVVREMKED 595
Query: 531 KRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASE 590
+ F I+ + A SLRCI+FA + N++ L E L+ LG++ +K
Sbjct: 596 DKIQFEKIIQSMAAK--SLRCIAFAYSEDNEDNKK----LKEEKLSLLGIIGIKDPCRPG 649
Query: 591 VKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFR 650
VK+A+EDC + AG+ IK+I D+I AR IA+ G IL P ED N AV+E FR
Sbjct: 650 VKKAVEDC-QFAGVNIKMITGDNIFTARAIAVECG-ILTP--EDEMNS--EAVLEGEKFR 703
Query: 651 SSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710
+ ++E R V+ ++VMA +SP DKLLMV+CLK+ G VVAVTG T DAP+LKEAD+G+S
Sbjct: 704 NYTQEERLEKVERIKVMARSSPFDKLLMVKCLKELGHVVAVTGDGTNDAPALKEADIGLS 763
Query: 711 IGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTXXXXXXXXXXXX 770
+G + + A++ SDIVILD+NF ++A LKWGRCV NNI+KFIQ LT
Sbjct: 764 MGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVA 823
Query: 771 XIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQXXXXXXXXXXXXXXXNKTVWRN 830
+ G++PL QLLWVNLIMD LGALALA +WRN
Sbjct: 824 AVSAGDVPLTAVQLLWVNLIMDTLGALALATEKP--TNDLMKKKPIGRVAPLITNIMWRN 881
Query: 831 IILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLINAREIEALNIF 890
++ Q YQ+ VL Q +G + V K ++FN+FVLCQVF NAR +E N+F
Sbjct: 882 LLAQAFYQISVLLVLQFRGRSIFNV-TEKVK-NTLIFNTFVLCQVFNEFNARSLEKKNVF 939
Query: 891 EGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVA 950
KGLH+N F+ I+ +L + ++E + R++L W VCI IA + P G +
Sbjct: 940 --KGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQWGVCIAIAAASWPIGWLV 997
Query: 951 KCIPMP 956
K +P+P
Sbjct: 998 KSVPVP 1003
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1112 (396.5 bits), Expect = 1.1e-112, P = 1.1e-112
Identities = 307/987 (31%), Positives = 489/987 (49%)
Query: 12 FSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGL 71
F I QE + ++ + + + G ++ ++ L+TNL+ GI G + ++ +R+ FGSN
Sbjct: 114 FGIGQEQIVSISRDQNIGALQELGGVRGLSDLLKTNLEKGIHGDDDDILKRKSAFGSNTY 173
Query: 72 TLSLENNCKHPASLHFGRLISDSIKDSTVIXXXXXXXXXXXXGIKRNGFEQGILDGAMVF 131
K S F R + ++ +D T+I GIK G E+G DG +
Sbjct: 174 PQ------KKGRS--FWRFVWEASQDLTLIILIVAAVASLALGIKTEGIEKGWYDGISIA 225
Query: 132 XXXXXXXXXXXLFRFVKNW-INELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCL 190
+ ++ L KR R ++V RDGR +I++ ++VVGDV+ L
Sbjct: 226 FAVLLVIVVTATSDYRQSLQFQNLNEEKRNIR---LEVTRDGRRVEISIYDIVVGDVIPL 282
Query: 191 QTGDQVPADGLFV--HXXXXXXXXXXXXX----------PCIFTGAKVVGGECSMLVTSV 238
GDQVPADG+ V H P + +G KV G +MLVT V
Sbjct: 283 NIGDQVPADGVLVAGHSLAVDESSMTGESKIVQKNSTKHPFLMSGCKVADGNGTMLVTGV 342
Query: 239 GENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWXXXXXXXXXXXXXGCF 298
G NTE +LM +S+D+ E+ LQ+ ++ + + + + F
Sbjct: 343 GVNTEWGLLMASVSEDNG------GETPLQVRLNGVATFIGIVGLTVAGVVLFVLVVRYF 396
Query: 299 AWGDDDHDPEPK--GGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLL 356
+ P+ GG ++ + ++ ++V F ++I+V +GL
Sbjct: 397 TGHTKNEQGGPQFIGG-KTKFEHVLDDLVEIF------------TVAVTIVVVAVPEGL- 442
Query: 357 PIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATD 416
P+ + + LAY+ +K+ +A R L C ++G T IC+ KT L+L+ + E +
Sbjct: 443 PLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNEMTVVECYAGLQ 502
Query: 417 NSFIKSTSADVLDA----LREAIA--TTSYXXXXXX---------XXXXXXXWAKEFLDV 461
+S+ + A L E IA TT WA + L +
Sbjct: 503 KMDSPDSSSKLPSAFTSILVEGIAHNTTGSVFRSESGEIQVSGSPTERAILNWAIK-LGM 561
Query: 462 DGDKMK-QNCTVE--AFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYL 518
D D +K ++ V+ FN K R G+ +K D+SVHIHW+G+ EI+L CTHY+
Sbjct: 562 DFDALKSESSAVQFFPFNSEKKRGGVAVK------SPDSSVHIHWKGAAEIVLGSCTHYM 615
Query: 519 DRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQ----NEEEII--ELTE 572
D + + E K + I D+ A SLRC++ A + E +EE++ EL E
Sbjct: 616 DESESFVDMSEDKMGGLKDAIDDMAAR--SLRCVAIAFRTFEADKIPTDEEQLSRWELPE 673
Query: 573 CGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGA 632
L L +V +K VK ++ C++ AG+K++++ D+I A+ IA+ G++ A
Sbjct: 674 DDLILLAIVGIKDPCRPGVKNSVLLCQQ-AGVKVRMVTGDNIQTAKAIALECGIL----A 728
Query: 633 EDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVT 692
D S+ + +IE VFRS SEE R + + + VM +SP DKLL+VQ LK++G VVAVT
Sbjct: 729 SD-SDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRRGHVVAVT 787
Query: 693 GMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKF 752
G T DAP+L EAD+G+++G + + A++ SDI+ILD+NF ++ ++WGR V NI+KF
Sbjct: 788 GDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANIQKF 847
Query: 753 IQLHLTXXXXXXXXXXXXXIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQXXXX 812
IQ LT I GE+PL QLLWVNLIMD LGALALA
Sbjct: 848 IQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPP--TDHLMD 905
Query: 813 XXXXXXXXXXXNKTVWRNIILQVLYQVFVLSATQLKGNELLQVQA--NKTDLK-AIVFNS 869
+WRN+ +Q +YQV VL +G +L +++ N +K ++FN+
Sbjct: 906 RAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNAERVKNTVIFNA 965
Query: 870 FVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMD 929
FV+CQVF NAR+ + +NIF +G+ +N F+ I+ +L + ++E + T++D
Sbjct: 966 FVICQVFNEFNARKPDEINIF--RGVLRNHLFVGIISITIVLQVVIVEFLGTFASTTKLD 1023
Query: 930 LKDWCVCIGIAVMTLPTGLVAKCIPMP 956
+ W VCIGI ++ P ++ K IP+P
Sbjct: 1024 WEMWLVCIGIGSISWPLAVIGKLIPVP 1050
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 864 (309.2 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
Identities = 214/643 (33%), Positives = 342/643 (53%)
Query: 344 LSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSL 403
++I+V +GL P+ + + LAY+ +K+ +A R L C ++G T IC+ KT L+L
Sbjct: 444 VTIVVVAVPEGL-PLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTL 502
Query: 404 DHANMAELWIATDNSFIKSTSADV---LDAL-REAIA--TTS----------YXXXXXXX 447
+ + E + + + + L AL E +A TT
Sbjct: 503 NQMTVVETYAGGSKMDVADNPSGLHPKLVALISEGVAQNTTGNIFHPKDGGEVEISGSPT 562
Query: 448 XXXXXXWAKEFLDVDGDKMK-QNCTVEAF--NISKNRAGLLLKWNGSESDGDNSVHIHWR 504
WA + L + D ++ ++ + AF N K R G+ + GD+ V IHW+
Sbjct: 563 EKAILSWAYK-LGMKFDTIRSESAIIHAFPFNSEKKRGGVAVL------RGDSEVFIHWK 615
Query: 505 GSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQN- 563
G+ EI+L+ CT Y+D +GTLQ+++ K + F I + N SLRC++ AC+ E
Sbjct: 616 GAAEIVLACCTQYMDSNGTLQSIESQK-EFFRVAIDSMAKN--SLRCVAIACRTQELNQV 672
Query: 564 --EEEIIE---LTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIAR 618
E+E ++ L E L L +V +K V++A+ C SAG+K++++ D++ A+
Sbjct: 673 PKEQEDLDKWALPEDELILLAIVGIKDPCRPGVREAVRICT-SAGVKVRMVTGDNLQTAK 731
Query: 619 LIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLM 678
IA+ G++ + D + + +IE VFR SE+ R + + VM +SP DKLL+
Sbjct: 732 AIALECGIL----SSD-TEAVEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLL 786
Query: 679 VQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAAN 738
VQ L++ G+VVAVTG T DAP+L EAD+G+S+G + A++ SDI+ILD+NF ++
Sbjct: 787 VQALRKNGDVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKV 846
Query: 739 LKWGRCVCNNIRKFIQLHLTXXXXXXXXXXXXXIFCGEIPLEPFQLLWVNLIMDVLGALA 798
++WGR V NI+KFIQ LT + G++PL+ QLLWVNLIMD LGALA
Sbjct: 847 VRWGRSVYANIQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALA 906
Query: 799 LAAPVSLRVQXXXXXXXXXXXXXXXNKTVWRNIILQVLYQVFVLSATQLKGNELLQVQ-- 856
LA +WRN+++Q YQV VL G +L +
Sbjct: 907 LATEPP--TDHLMHRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHE 964
Query: 857 --ANKTDLK-AIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDI 913
A+ ++K ++FN+FV+CQ+F NAR+ + +N+F +G+++NP F+ IVG FIL I
Sbjct: 965 NHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNVF--RGVNKNPLFVAIVGVTFILQI 1022
Query: 914 AVIEMVTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCIPMP 956
++ + H R+ + W I I +++ P +V K IP+P
Sbjct: 1023 IIVTFLGKFAHTVRLGWQLWLASIIIGLVSWPLAIVGKLIPVP 1065
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1065 (380.0 bits), Expect = 1.0e-107, P = 1.0e-107
Identities = 295/982 (30%), Positives = 481/982 (48%)
Query: 12 FSIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGL 71
F I E + ++++ + Q G Q +A L+TN + GISG + +L +R+ ++GSN
Sbjct: 114 FGITPEQLVIMSKDHNSGALEQYGGTQGLANLLKTNPEKGISGDDDDLLKRKTIYGSN-- 171
Query: 72 TLSLENNCKHPASLHFGRLISDSIKDSTVIXXXXXXXXXXXXGIKRNGFEQGILDGAMVF 131
F R + D+ D T+I GIK G ++G DG +
Sbjct: 172 ------TYPRKKGKGFLRFLWDACHDLTLIILMVAAVASLALGIKTEGIKEGWYDGGSIA 225
Query: 132 XXXXXXXXXXXLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQ 191
+ + ++ + L ++ R ++V+R GR +I++ ++VVGDV+ L
Sbjct: 226 FAVILVIVVTAVSDYKQSLQFQNLNDEK--RNIHLEVLRGGRRVEISIYDIVVGDVIPLN 283
Query: 192 TGDQVPADGLFV--HXXXXXXXXXXXXX----------PCIFTGAKVVGGECSMLVTSVG 239
G+QVPADG+ + H P + +G KV G SMLVT VG
Sbjct: 284 IGNQVPADGVLISGHSLALDESSMTGESKIVNKDANKDPFLMSGCKVADGNGSMLVTGVG 343
Query: 240 ENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWXXXXXXXXXXXXXGCFA 299
NTE +LM +S+D+ +E+ LQ+ ++ + + + I F
Sbjct: 344 VNTEWGLLMASISEDNG------EETPLQVRLNGVATFIGSIGLAVAAAVLVILLTRYFT 397
Query: 300 WGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIG 359
D++ P+ V+ K +G V+ ++ ++I+V +GL P+
Sbjct: 398 GHTKDNNGGPQF-VKGKTK--VGHVIDDVVKVLTVA--------VTIVVVAVPEGL-PLA 445
Query: 360 LFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSF 419
+ + LAY+ +K+ +A R L C ++G T IC+ KT L+L+ + E + +
Sbjct: 446 VTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVESYAGGKKTD 505
Query: 420 IKSTSADVLDALREAIA--TTS----------YXXXXXXXXXXXXXWAKEFLDVDGDKMK 467
+ A + + E I+ TT W + L ++ + +
Sbjct: 506 TEQLPATITSLVVEGISQNTTGSIFVPEGGGDLEYSGSPTEKAILGWGVK-LGMNFETAR 564
Query: 468 -QNCTVEAF--NISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTL 524
Q+ + AF N K R G+ +K +DG+ VH+HW+G+ EI+L+ C Y+D G +
Sbjct: 565 SQSSILHAFPFNSEKKRGGVAVK----TADGE--VHVHWKGASEIVLASCRSYIDEDGNV 618
Query: 525 QTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNE---EEIIE--LTECGLTWLG 579
+ + K F N I D+ +LRC++ A + E + EE+ + L E L L
Sbjct: 619 APMTDDKASFFKNGINDMAGR--TLRCVALAFRTYEAEKVPTGEELSKWVLPEDDLILLA 676
Query: 580 LVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGY 639
+V +K VK ++ C ++AG+K++++ D++ AR IA+ G IL A D S
Sbjct: 677 IVGIKDPCRPGVKDSVVLC-QNAGVKVRMVTGDNVQTARAIALECG-ILSSDA-DLS--- 730
Query: 640 DAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDA 699
+ +IE FR ++ R + D + VM +SP DKLL+VQ L+++G VVAVTG T DA
Sbjct: 731 EPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQGHVVAVTGDGTNDA 790
Query: 700 PSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTX 759
P+L EAD+G+++G + A++ SDI+ILD+NF ++ ++WGR V NI+KFIQ LT
Sbjct: 791 PALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTV 850
Query: 760 XXXXXXXXXXXXIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQXXXXXXXXXXX 819
I G++PL QLLWVNLIMD LGALALA
Sbjct: 851 NVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPP--TDHLMGRPPVGRK 908
Query: 820 XXXXNKTVWRNIILQVLYQVFVLSATQLKGNELL----QVQANKTDLK-AIVFNSFVLCQ 874
+WRN+++Q +YQV VL +G +L +V + T +K I+FN+FVLCQ
Sbjct: 909 EPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTIIFNAFVLCQ 968
Query: 875 VFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWC 934
F NAR+ + NIF KG+ +N F+ I+ +L + ++E + T+++ K W
Sbjct: 969 AFNEFNARKPDEKNIF--KGVIKNRLFMGIIVITLVLQVIIVEFLGKFASTTKLNWKQWL 1026
Query: 935 VCIGIAVMTLPTGLVAKCIPMP 956
+C+GI V++ P LV K IP+P
Sbjct: 1027 ICVGIGVISWPLALVGKFIPVP 1048
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 631 (227.2 bits), Expect = 4.9e-91, Sum P(3) = 4.9e-91
Identities = 149/456 (32%), Positives = 239/456 (52%)
Query: 504 RGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQN 563
+G+ EI+L MC + +D +G L E + + ++ I + +LR + K +++
Sbjct: 575 KGASEIVLKMCENVVDSNGESVPLTEERITSISDIIEGFASE--ALRTLCLVYKDLDEAP 632
Query: 564 EEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAIN 623
E L + G T + +V +K V++A++ C ++AGI ++++ D+I+ A+ IA
Sbjct: 633 SGE---LPDGGYTMVAVVGIKDPVRPGVREAVQTC-QAAGITVRMVTGDNISTAKAIAKE 688
Query: 624 SGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLK 683
G+ + G IE S FR S ++ ++VMA + PLDK +V L+
Sbjct: 689 CGIYTEGGL----------AIEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLR 738
Query: 684 QKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGR 743
+ GEVVAVTG T DAP+L EAD+G+++G + A++ +D++I+D+NF TI +WGR
Sbjct: 739 KIGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGR 798
Query: 744 CVCNNIRKFIQLHLTXXXXXXXXXXXXXIFCGEIPLEPFQLLWVNLIMDVLGALALAA-P 802
V NI+KF+Q LT G PL QLLWVN+IMD LGALALA P
Sbjct: 799 AVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEP 858
Query: 803 VSLRVQXXXXXXXXXXXXXXXNKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTD- 861
+ + KT+WRNI Q +YQ+ VL G LL++ +
Sbjct: 859 PN---EGLMKRAPIARTASFITKTMWRNIAGQSVYQLIVLGILNFAGKSLLKLDGPDSTA 915
Query: 862 -LKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPW-FLVIVGFIFILDIAVIEMV 919
L ++FNSFV CQVF IN+REIE +N+F KG+ N W F ++ + + ++E +
Sbjct: 916 VLNTVIFNSFVFCQVFNEINSREIEKINVF--KGMF-NSWVFTWVMTVTVVFQVIIVEFL 972
Query: 920 TVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCIPM 955
+ + W + I I + + ++ KC+P+
Sbjct: 973 GAFASTVPLSWQHWLLSILIGSLNMIVAVILKCVPV 1008
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 622 (224.0 bits), Expect = 1.3e-88, Sum P(3) = 1.3e-88
Identities = 154/468 (32%), Positives = 239/468 (51%)
Query: 493 SDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCI 552
S V +G+ EI+L MC +D +G L E K + ++ I + +LR +
Sbjct: 561 SHSGGKVRAFCKGASEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASE--ALRTL 618
Query: 553 SFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILED 612
C +E +L G T + +V +K V++A++ C ++AGI ++++ D
Sbjct: 619 ---CLVYTDLDEAPRGDLPNGGYTLVAVVGIKDPVRPGVREAVQTC-QAAGITVRMVTGD 674
Query: 613 DINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASP 672
+I+ A+ IA G++ G IE S FR+ ++ ++VMA + P
Sbjct: 675 NISTAKAIAKECGILTAGGV----------AIEGSDFRNLPPHEMRAILPKIQVMARSLP 724
Query: 673 LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENF 732
LDK +V L++ GEVVAVTG T DAP+L EAD+G+++G + A++ +D++I+D+NF
Sbjct: 725 LDKHTLVNNLRKMGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNF 784
Query: 733 TTIAANLKWGRCVCNNIRKFIQLHLTXXXXXXXXXXXXXIFCGEIPLEPFQLLWVNLIMD 792
TI KWGR V NI+KF+Q LT G PL QLLWVN+IMD
Sbjct: 785 ATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMD 844
Query: 793 VLGALALAA-PVSLRVQXXXXXXXXXXXXXXXNKTVWRNIILQVLYQVFVLSATQLKGNE 851
LGALALA P + + + +WRNII Q +YQ+ VL G +
Sbjct: 845 TLGALALATEPPN---EGLMKRQPIGRTASFITRAMWRNIIGQSIYQLIVLGILNFAGKQ 901
Query: 852 LLQVQANKTD--LKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIF 909
+L + + L I+FNSFV CQVF +N+REIE +N+FEG + ++ F+ ++
Sbjct: 902 ILNLNGPDSTIVLNTIIFNSFVFCQVFNEVNSREIEKINVFEG--MFKSWVFVAVMTATV 959
Query: 910 ILDIAVIEMVTVVTHGTRMDLKDW--CVCIGIAVMTLPTGLVAKCIPM 955
+ ++E + + + W C+ IG M L GL KCIP+
Sbjct: 960 GFQVIIVEFLGAFASTVPLSWQHWLLCILIGSVSMILAVGL--KCIPV 1005
|
|
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 632 (227.5 bits), Expect = 8.6e-86, Sum P(3) = 8.6e-86
Identities = 148/457 (32%), Positives = 237/457 (51%)
Query: 502 HWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQ 561
H +G+ EI+L C Y+++ G + LDE N I + + +LR + A +
Sbjct: 579 HCKGASEIVLDSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASE--ALRTLCLAYFEIGD 636
Query: 562 QNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIA 621
+ E + G T +G+V +K VK+++ C+ SAGI ++++ D++ A+ IA
Sbjct: 637 EFSLEA-PIPSGGYTCIGIVGIKDPVRPGVKESVAICK-SAGITVRMVTGDNLTTAKAIA 694
Query: 622 INSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQC 681
G++ D IE FR S+E ++ ++VMA +SP+DK +V+
Sbjct: 695 RECGILTD----------DGIAIEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRL 744
Query: 682 LKQK-GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLK 740
L+ EVVAVTG T DAP+L EAD+G+++G + A++ +D++ILD+NF+TI K
Sbjct: 745 LRTMFQEVVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAK 804
Query: 741 WGRCVCNNIRKFIQLHLTXXXXXXXXXXXXXIFCGEIPLEPFQLLWVNLIMDVLGALALA 800
WGR V NI+KF+Q LT G PL QLLWVN+IMD LGALALA
Sbjct: 805 WGRSVYINIQKFVQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALA 864
Query: 801 APVSLRVQXXXXXXXXXXXXXXXNKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKT 860
+ +WRNI+ Q LYQ+ ++ Q KG + + +
Sbjct: 865 TEPPQ--DDLMKRSPVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPDS 922
Query: 861 DL--KAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEM 918
DL ++FN FV CQVF I++RE+E +++F KG+ +N F+ ++ + + +IE+
Sbjct: 923 DLTLNTLIFNIFVFCQVFNEISSREMEKIDVF--KGILKNYVFVAVLTCTVVFQVIIIEL 980
Query: 919 VTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCIPM 955
+ T ++L W V I + + +P K IP+
Sbjct: 981 LGTFADTTPLNLGQWLVSIILGFLGMPVAAALKMIPV 1017
|
|
| DICTYBASE|DDB_G0289473 DDB_G0289473 "Ca2+-ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 634 (228.2 bits), Expect = 5.3e-85, Sum P(3) = 5.3e-85
Identities = 176/499 (35%), Positives = 266/499 (53%)
Query: 472 VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHK 531
V F+ K + +L+ N + S G + I+ +G+ EI+L+ CT+ +D++G +
Sbjct: 512 VYPFSSEKKMSAVLMNQNQNISGG---LIIYVKGAAEIVLNNCTNIVDKNGESTQMS--- 565
Query: 532 RDAFNNFIRDIEA-NHHSLRCISFACKRVEQQ-NEEEIIELTECGLTWLGLVRLKSAYAS 589
RD +DIE LR + A K + + + E+ ++ GLT+LGLV +K
Sbjct: 566 RDEKMLLQKDIEIFASEGLRTLVLAYKEINNEPSSEDEAKVIYTGLTFLGLVGIKDPVRK 625
Query: 590 EVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVF 649
EV +A++ C + AGI ++++ D+I A+ IA G ILK G IE F
Sbjct: 626 EVPRAVKRC-QGAGIFVRMLTGDNILTAKNIARECG-ILKDGG---------VAIEGPQF 674
Query: 650 RSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709
R +++ ++ +++V+A SP DK +V L++ GEVVAVTG DAP LKEADVG
Sbjct: 675 RLLTDDQLDTIIPHLQVIARCSPTDKFRLVHRLRELGEVVAVTGDGVNDAPQLKEADVGF 734
Query: 710 SIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTXXXXXXXXXXX 769
S+G + A++ SDIV+LD+NF +IA + WGR V ++IRKFIQ LT
Sbjct: 735 SMGIAGTEVAKEASDIVLLDDNFNSIAKAVIWGRNVYDSIRKFIQFQLTVNIVAVLIAFV 794
Query: 770 XXIFCGEIPLEPFQLLWVNLIMDVLGALALAA-PVSLRVQXXXXXXXXXXXXXXXNKTVW 828
I GE PL P QLLWVNLIMD LGALAL+ P S + +W
Sbjct: 795 GSITNGESPLRPVQLLWVNLIMDTLGALALSTEPPS---EELFNRRPYGRFDSLITYRMW 851
Query: 829 RNIILQVLYQV-FVLS-----ATQLKGNELLQVQA----NKTDLKAIVFNSFVLCQVFVL 878
RNII Q +YQ+ F+ S A+ ++ +L +V +KT I+FN+FV CQ F
Sbjct: 852 RNIIGQSIYQIAFLFSIMYSAASMVELFDLPRVDQWTTNDKTVYHTIIFNTFVFCQFFNE 911
Query: 879 INAREIE-ALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTR-MDLKDWCVC 936
IN R ++ LN+F + +H++ F+ +V F + + ++E GTR +D K W C
Sbjct: 912 INCRVLDNQLNVF--RNIHKSYVFVGVVSFCIFIQVILVEFGGEF-FGTRHLDYKQWFFC 968
Query: 937 IGIAVMTLPTGLVAKCIPM 955
I I +L G + +P+
Sbjct: 969 IIIGFGSLIWGFCLRLLPL 987
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 623 (224.4 bits), Expect = 7.3e-83, Sum P(3) = 7.3e-83
Identities = 153/462 (33%), Positives = 241/462 (52%)
Query: 499 VHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKR 558
+ H +G+ EI+L+ C ++ G + LD+ F N D AN +LR + A
Sbjct: 574 IRAHTKGASEIVLAACDKVINSSGEVVPLDDESIK-FLNVTIDEFANE-ALRTLCLAYMD 631
Query: 559 VEQQ-NEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIA 617
+E + +E I E G T +G+V +K V++++E CR AGI ++++ D+IN A
Sbjct: 632 IESGFSADEGIP--EKGFTCIGIVGIKDPVRPGVRESVELCRR-AGIMVRMVTGDNINTA 688
Query: 618 RLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLL 677
+ IA G++ D IE VFR ++E ++ ++VMA +SP+DK
Sbjct: 689 KAIARECGILTD----------DGIAIEGPVFREKNQEEMLELIPKIQVMARSSPMDKHT 738
Query: 678 MVQCLKQK-GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIA 736
+V+ L+ EVVAVTG T DAP+L EAD+G+++G + A++ +D++ILD+NF+TI
Sbjct: 739 LVKQLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEIADVIILDDNFSTIV 798
Query: 737 ANLKWGRCVCNNIRKFIQLHLTXXXXXXXXXXXXXIFCGEIPLEPFQLLWVNLIMDVLGA 796
KWGR V NI+KF+Q LT G PL QLLWVN+IMD LGA
Sbjct: 799 TVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGSAPLTAVQLLWVNMIMDTLGA 858
Query: 797 LALAA-PVSLRVQXXXXXXXXXXXXXXXNKTVWRNIILQVLYQVFVLSATQLKGNELLQV 855
LALA P + + +WRNI+ Q +YQ ++ Q KG + +
Sbjct: 859 LALATEPPNNELMKRMPVGRRGNFIT---NAMWRNILGQAVYQFIIIWILQAKGKSMFGL 915
Query: 856 QANKTDL--KAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDI 913
+ + L ++FN FV CQVF +++RE+E +++F KG+ N F+V++G I
Sbjct: 916 VGSDSTLVLNTLIFNCFVFCQVFNEVSSREMEEIDVF--KGILDNYVFVVVIGATVFFQI 973
Query: 914 AVIEMVTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCIPM 955
+IE + T + + W I + + +P K IP+
Sbjct: 974 IIIEFLGTFASTTPLTIVQWFFSIFVGFLGMPIAAGLKKIPV 1015
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LY77 | ACA12_ARATH | 3, ., 6, ., 3, ., 8 | 0.3694 | 0.9267 | 0.8576 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pm.C_LG_VIII000685 | autoinhibited calcium ATPase (984 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 956 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-159 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-105 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-58 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-52 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 9e-43 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 8e-30 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-28 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 3e-25 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 8e-22 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-21 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 4e-20 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-14 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-12 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 6e-12 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 8e-11 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-10 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 5e-10 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-09 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-07 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 4e-07 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-06 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 7e-06 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 1e-05 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 3e-05 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-05 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 4e-05 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 8e-05 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-04 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-04 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 8e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 0.002 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 491 bits (1265), Expect = e-159
Identities = 289/969 (29%), Positives = 466/969 (48%), Gaps = 118/969 (12%)
Query: 35 GRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDS 94
G + IA L+T+L+ G+ L RR +V+G N L F +++ +
Sbjct: 43 GGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELP--------EKPPKSFLQIVWAA 94
Query: 95 IKDSTVILLLCCATLSLLLGIKRNG-----FEQGILDGAMVFVVISSVVCISSLFRFVKN 149
+ D T+ILL A +SL+LG+ G E G ++G + V + VV +++ V +
Sbjct: 95 LSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTA----VND 150
Query: 150 WINELLVSK--RTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKN 207
+ EL + R + V+R G+ +QI++ ++VVGD+V L TGD VPADG+F+ G +
Sbjct: 151 YKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLS 210
Query: 208 LKLDD------------GDDKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDD 255
L++D+ G + P + +G V G MLVT+VG N+ LM L +
Sbjct: 211 LEIDESSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAG 270
Query: 256 RINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCF---AWGDDDHDPEPKGG 312
+ LQ + + + K + ++L+ +V L GD E
Sbjct: 271 E------DSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEE---- 320
Query: 313 VRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLP 372
T + ++ ++I+V +GL P+ + I LAY+ KK+
Sbjct: 321 -------------------DAQTFLDHFIIAVTIVVVAVPEGL-PLAVTIALAYSMKKMM 360
Query: 373 CFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWI----ATDNSFIKSTSADVL 428
R+L C ++G TAIC+ KT L+ + ++ + +I +++ V
Sbjct: 361 KDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVR 420
Query: 429 DALREAIATTSYDEAAVDD-----------DDALLLWAKEFLDVDGDKMKQNCTVE--AF 475
+ L E I+ S E VD + ALL + L + + V+ F
Sbjct: 421 NILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPF 480
Query: 476 NISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAF 535
N + +++K +G +G+ EI+L C LD +G + + +D
Sbjct: 481 NSERKFMSVVVKHSG------GKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRC 534
Query: 536 NNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAI 595
+ I + ++ +LR I A + E + GLT +G+V +K V++A+
Sbjct: 535 ADVIEPLASD--ALRTICLAYRDF-APEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAV 591
Query: 596 EDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEE 655
++C+ AGI ++++ D+I+ A+ IA N G IL G +E FRS E
Sbjct: 592 QECQR-AGITVRMVTGDNIDTAKAIARNCG-ILTFGG---------LAMEGKEFRSLVYE 640
Query: 656 TRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERS 715
++ +RV+A +SPLDK L+V LK GEVVAVTG T DAP+LK ADVG S+G
Sbjct: 641 EMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISG 700
Query: 716 AQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCG 775
+ A++ SDI++LD+NF +I +KWGR V +NIRKF+Q LTVN A + V +
Sbjct: 701 TEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS 760
Query: 776 EIPLEPFQLLWVNLIMDVLGALALAA--PV-SLRVQLPAHATAAASASPLANKTVWRNII 832
PL QLLWVNLIMD L ALALA P +L + P A PL ++++W+NI+
Sbjct: 761 TSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNA-----PLISRSMWKNIL 815
Query: 833 LQVLYQVFVLSATQLKGNELLQV-------QANKTDLKAIVFNSFVLCQVFVLINAREIE 885
Q YQ+ V G + V + +L IVFN+FVL Q+F INAR++
Sbjct: 816 GQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLY 875
Query: 886 ALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGIAVMTLP 945
N+FE GL +N F+ I+GF F + ++E + ++ W C+ + +++L
Sbjct: 876 ERNVFE--GLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLI 933
Query: 946 TGLVAKCIP 954
G++ + IP
Sbjct: 934 FGVLLRLIP 942
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 348 bits (894), Expect = e-105
Identities = 242/984 (24%), Positives = 413/984 (41%), Gaps = 149/984 (15%)
Query: 27 SYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLH 86
S T S + L T+ G+S +E ++RR + +G N L
Sbjct: 20 SETWHPLSVERNELLLELFTSPTTGLSEEE--VKRRLKKYGPNEL--------PEEKKRS 69
Query: 87 FGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRF 146
+ KD +ILLL A LS +G +D + +VI VV I++L F
Sbjct: 70 LLKKFLRQFKDPFIILLLVAALLSAFVGD--------WVDAGVDAIVILLVVVINALLGF 121
Query: 147 VKNWINEL-LVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHG 205
V+ + E L + + KV+RDG+ +I SE+V GD+V L+ GD VPAD +
Sbjct: 122 VQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLES 181
Query: 206 KNLKLD----DGD----DKLPC----------------IFTGAKVVGGECSMLVTSVGEN 241
+L++D G+ +K +F+G VV G +V + G
Sbjct: 182 SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFE 241
Query: 242 TETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWG 301
TE + +LL ++ LQ ++++G + + L+L L +V
Sbjct: 242 TEFGKIARLLPTKKE------VKTPLQRKLNKLGKFL--LVLALVLGALVF--------- 284
Query: 302 DDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEML--SILVFVSRDGLLPIG 359
VV F N +E ++ + V+ +P G
Sbjct: 285 ----------------------VVGLF------RGGNGLLESFLTALALAVA---AVPEG 313
Query: 360 LF----ICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIAT 415
L I LA ++++ A R+L +LG V IC+ KT L+ + + +++I
Sbjct: 314 LPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYING 373
Query: 416 DNSFIKSTSADVLDALREAIAT-----------TSYDEAAVDDDDALLLWAKEF-LDVDG 463
I AL + + +A + AL+ +A++ +D
Sbjct: 374 GGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDL 433
Query: 464 DKMKQNCTVEA---FNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDR 520
++ + A F+ + R +++K + + +G+PE+IL C
Sbjct: 434 SGLEVEYPILAEIPFDSERKRMSVIVK------TDEGKYILFVKGAPEVILERCKSI--- 484
Query: 521 HGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGL 580
G L+ L E ++++ LR ++ A K++++ +++ ++ E L +LGL
Sbjct: 485 -GELEPLTEEGLRTLEEAVKEL--ASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGL 541
Query: 581 VRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYD 640
++ +VK+AIE+ RE AGIK+ +I D + A IA G+ +
Sbjct: 542 TGIEDPPREDVKEAIEELRE-AGIKVWMITGDHVETAIAIAKECGI--------EAEAES 592
Query: 641 AAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAP 700
A VI+ + + S+E + +V+ + V A SP K +V+ L++ G VVA+TG DAP
Sbjct: 593 ALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAP 652
Query: 701 SLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVN 760
+LK ADVG+++G A++ +DIV+LD+NF TI + GR V NI+KFI L+ N
Sbjct: 653 ALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKN 712
Query: 761 AAAFAVNLVAAIFCGEI-PLEPFQLLWVNLIMDVLGALALA--APVSLRVQLPAHATAAA 817
L+ ++F PL P QLLW+NL+ D L ALAL P S ++ P
Sbjct: 713 VGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGP--- 769
Query: 818 SASPLANKTVWRNIILQVLYQVFVLSATQLK-----GNELLQVQANKTDLKAIVFNSFVL 872
K WR I++ L + T L L + + L+ F VL
Sbjct: 770 EEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVL 829
Query: 873 CQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIE---MVTVVTHGTRMD 929
Q+ + + R L N + + + I IL + +I + + T +
Sbjct: 830 IQLLLTLAVR-SRGRPFLS-SLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLS 887
Query: 930 LKDWCVCIGIAVMTLPTGLVAKCI 953
L +W + I +A++ L +
Sbjct: 888 LFEWLIAIAVALLLLYIVVSELYK 911
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 215 bits (550), Expect = 2e-58
Identities = 226/961 (23%), Positives = 387/961 (40%), Gaps = 210/961 (21%)
Query: 37 IQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIK 96
++ + L+T+L G++ + E RR G N + + + + + +S +K
Sbjct: 9 VEETCSKLQTDLQNGLNSSQ-EASHRRAFHGWNEFDVEEDESL-------WKKFLSQFVK 60
Query: 97 DSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLV 156
+ ++LL+ A +S+ +G I D + + I VV + FV+ + +E
Sbjct: 61 NPLILLLIASAVISVFMG--------NIDDAVSITLAILIVVTVG----FVQEYRSE--- 105
Query: 157 SKRTSRRAAVK-------VMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLK 209
S A K ++R+G++ + S +V GD+VCL GD+VPAD V +L
Sbjct: 106 ---KSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLS 162
Query: 210 LDDGD---DKLPC---------------------IFTGAKVVGGECSMLVTSVGENTETS 245
+D+ + + P F G V G +V G NTE
Sbjct: 163 IDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFG 222
Query: 246 MLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSL-SLLVIVVQVLGCFAWGDDD 304
+ K++ ++ ++ LQ S+D +G + LSL S VI V L + G D
Sbjct: 223 AVFKMMQAIEK------PKTPLQKSMDLLGKQ-----LSLVSFGVIGVICLVGWFQGKD- 270
Query: 305 HDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGL---LPIGLF 361
++EM +I V ++ + LPI +
Sbjct: 271 -----------------------------------WLEMFTISVSLAVAAIPEGLPIIVT 295
Query: 362 ICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIK 421
+ LA ++ RA R LP +LG V IC+ KT L+ +H + ++W
Sbjct: 296 VTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIW--------- 346
Query: 422 STSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQN---CTVEAFNIS 478
D L + S ++ D +L F V ++ + C F
Sbjct: 347 -----TSDGLHTMLNAVSLNQFGEVIVDGDVL--HGFYTVAVSRILEAGNLCNNAKFR-- 397
Query: 479 KNRAGLLL------------------------------------KWNGSE--SDGDNSVH 500
N A LL KW + D S
Sbjct: 398 -NEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEM 456
Query: 501 IHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVE 560
+G+ E +L CT+Y + G TL + +RD ++ + LR I+FA +
Sbjct: 457 CFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASA--GLRVIAFASGPEK 514
Query: 561 QQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLI 620
Q LT+LGLV + VK+A+ G++I +I D A I
Sbjct: 515 GQ------------LTFLGLVGINDPPRPGVKEAVTTLITG-GVRIIMITGDSQETAVSI 561
Query: 621 AINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQ 680
A G+ K DA ++ S +V V V A ASP K+ +V+
Sbjct: 562 ARRLGMPSKTSQSVSGEKLDAM----------DDQQLSQIVPKVAVFARASPEHKMKIVK 611
Query: 681 CLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLK 740
L+++G+VVA+TG DAP+LK AD+GV++G+ A++ +D+++ D++F TI + ++
Sbjct: 612 ALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIE 671
Query: 741 WGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALA 800
G+ + NNI+ FI L+ + AA ++ +A + PL Q+LW+N++MD G A
Sbjct: 672 EGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMD--GPPAQ- 728
Query: 801 APVSLRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELL---QVQA 857
SL V+ P +K + +++I ++L ++ + G + ++Q
Sbjct: 729 ---SLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIII----VVGTLFVFVREMQD 781
Query: 858 NKTDLK--AIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAV 915
+ + F FV +F + R + ++FE G N F VG I + V
Sbjct: 782 GVITARDTTMTFTCFVFFDMFNALACRS-QTKSVFE-IGFFSNRMFNYAVGGSIIGQLLV 839
Query: 916 I 916
I
Sbjct: 840 I 840
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 2e-52
Identities = 178/716 (24%), Positives = 301/716 (42%), Gaps = 132/716 (18%)
Query: 167 KVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDG------------- 213
KV+RDGR I ++V GD+V L GD+VPAD + K L++D
Sbjct: 76 KVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHT 135
Query: 214 ----------DDKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYK 263
DK +F+G VV G+ +V G +TE + D + + +
Sbjct: 136 ESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKI------RDEMRAAEQE 189
Query: 264 ESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGE 323
++ LQ +D G + K+ + L+ I+V V+ + D G ++ +
Sbjct: 190 DTPLQKKLDEFGELLSKV---IGLICILVWVINIGHFNDPAL---GGGWIQGAI------ 237
Query: 324 VVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPV 383
Y ++ L + LP + CLA ++K+ A R LP
Sbjct: 238 ---------------YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPS 282
Query: 384 CSSLGLVTAICTGKTSDLSLDHANMAELWIATD-----NSF-IKSTSADVLDAL---REA 434
+LG T IC+ KT L+ + ++ ++ N F + T+ +
Sbjct: 283 VETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGP 342
Query: 435 IATTSYDE-------AAVDDDDALLL-WAKEFLDVDGDKMKQ--NCTVEAFNISKNRAGL 484
+A AA+ +D +L K + G+ + VE + + G+
Sbjct: 343 VAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGV 402
Query: 485 LLKWNGSESDGDNSV-----------------------------HIHW-RGSPEIILSMC 514
K + G NSV + + +G+PE +L C
Sbjct: 403 SSK--RRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERC 460
Query: 515 THYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELT--- 571
TH L+ G L + ++ + I+++ +LRC++ A K + EE+++
Sbjct: 461 THILNGDGRAVPLTDKMKNTILSVIKEM-GTTKALRCLALAFKDIPDPREEDLLSDPANF 519
Query: 572 ---ECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLIL 628
E LT++G+V + EV AIE CR AGI++ +I D+ A I G I
Sbjct: 520 EAIESDLTFIGVVGMLDPPRPEVADAIEKCRT-AGIRVIMITGDNKETAEAICRRIG-IF 577
Query: 629 KPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEV 688
P + + F + + + + P K +V+ L+++GE+
Sbjct: 578 SPDEDVTFKSF-----TGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEI 632
Query: 689 VAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNN 748
VA+TG DAP+LK+AD+G+++G + A++ SD+V+ D+NF TI A ++ GR + NN
Sbjct: 633 VAMTGDGVNDAPALKKADIGIAMGSGTE-VAKEASDMVLADDNFATIVAAVEEGRAIYNN 691
Query: 749 IRKFIQLHLTVNAAAFAVNLVAAIF---CGEIP--LEPFQLLWVNLIMDVLGALAL 799
+++FI+ ++ N + V IF IP L P QLLWVNL+ D L A AL
Sbjct: 692 MKQFIRYMISSN-----IGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATAL 742
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 164 bits (416), Expect = 9e-43
Identities = 151/696 (21%), Positives = 262/696 (37%), Gaps = 179/696 (25%)
Query: 129 MVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVV 188
++F+V+ V+ + ++ + L +R A V R+G ++I ++V GDVV
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVL--RNG-WKEIPAKDLVPGDVV 58
Query: 189 CLQTGDQVPADGLFVHG-----------------KNLKLDDGDDKLPC--IFTGAKVVGG 229
+++G+ VPADG+ + G K + + +F G V GG
Sbjct: 59 LVKSGETVPADGVLLSGSCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGG 118
Query: 230 ECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLV 289
++VT G T + ++ + + + LQ DR+ E L LL+
Sbjct: 119 TLIVVVTPTGILTTVGRIAVVVKT-----GFETR-TPLQSKRDRL----ENFIFILFLLL 168
Query: 290 IVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVF 349
+ + V + FIR S + + +++V
Sbjct: 169 LALAV-----------------------------FLYLFIRGWDPNSIFKALLR-ALIVL 198
Query: 350 VSRDGLLPIGLF----ICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDH 405
V ++P L + LA +L RNL LG V +C+ KT L+ +
Sbjct: 199 VI---VVPPALPAAVTVALAVGDARLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNK 255
Query: 406 ANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAK--EFLDVDG 463
+ ++I S A + ALL A+ D
Sbjct: 256 MTLQGVYIDGGKEDNSS--------SLVACDNNYLSGDP--MEKALLKSAELVGKADKGN 305
Query: 464 DKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGT 523
+ K F+ R ++++ D S + +G+PE IL C +Y
Sbjct: 306 KEYKILDVFP-FSSVLKRMSVIVETP------DGSDLLFVKGAPEFILERCNNYE----- 353
Query: 524 LQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRL 583
+ E R R ++FA K +E L +LGL+
Sbjct: 354 -EKYLELARQGL--------------RVLAFASKELED------------DLEFLGLITF 386
Query: 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAV 643
+ + K+ IE+ + AGIK+ +I D++ A+ IA G+
Sbjct: 387 EDPLRPDAKETIEELKA-AGIKVVMITGDNVLTAKAIAKELGID---------------- 429
Query: 644 IEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLK 703
V A SP KL +V+ L++KG +VA+TG DAP+LK
Sbjct: 430 ----------------------VFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALK 467
Query: 704 EADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAA 763
+ADVG+++G ++A +DIV+LD++ + I +K GR + +NI+ I + N
Sbjct: 468 KADVGIAMGAKAA------ADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLIL 521
Query: 764 FAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALAL 799
+ L+ + L++ +L ALAL
Sbjct: 522 IPLALLLIVI--------------ILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 127 bits (320), Expect = 8e-30
Identities = 96/325 (29%), Positives = 163/325 (50%), Gaps = 31/325 (9%)
Query: 501 IHWRGSPEIILSMCTHYLDRHGT-LQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRV 559
I+ +G+ E I+ C+ + G + L++ R+ + + A LR ++FA K
Sbjct: 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA--EGLRVLAFASKSF 611
Query: 560 E--QQNEEEIIELT------ECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILE 611
+ N++++ T E L +LGL+ + +E A+E C + AGI + ++
Sbjct: 612 DKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQ-AGINVHMLTG 670
Query: 612 DDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR----VM 667
D A+ IA G+I D D+ V+ S F + S+E VD+++ V+
Sbjct: 671 DFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEE----VDDLKALCLVI 726
Query: 668 ANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVI 727
A +P K+ M++ L ++ A+TG D+PSLK A+VG+++G + A+D SDIV+
Sbjct: 727 ARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVL 786
Query: 728 LDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAI-FCGEI-----PLEP 781
D+NF +I ++ GR + +NI KF+ LHL A A+ L+ + F E PL P
Sbjct: 787 SDDNFASILNAIEEGRRMFDNIMKFV-LHLLAENVAEAILLIIGLAFRDENGKSVFPLSP 845
Query: 782 FQLLWVNLIMDVLGALAL----AAP 802
++LW +I A+ L AAP
Sbjct: 846 VEILWCIMITSCFPAMGLGLEKAAP 870
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 4e-28
Identities = 138/512 (26%), Positives = 232/512 (45%), Gaps = 66/512 (12%)
Query: 343 MLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLS 402
++ I+V +GLL + +CL +K++ +NL +LG + IC+ KT L+
Sbjct: 298 LIGIIVANVPEGLLAT-VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356
Query: 403 LDHANMAELWIATDNSFIKS-TSAD--------------------------VLDALREAI 435
+ +A +W DN ++ T+ D V A +E +
Sbjct: 357 QNRMTVAHMWF--DNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENV 414
Query: 436 ATTSYDEAAVDDDDALLLWAKEFL-DVDGDKMKQNCTVE-AFNISKNRAGLLLKWNGSES 493
A + ALL + L V + + VE FN S N+ L + N E
Sbjct: 415 PILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFN-STNKYQLSIHEN--ED 471
Query: 494 DGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCIS 553
D + +G+PE IL C+ L HG Q LDE ++AF N +E R +
Sbjct: 472 PRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAY--LELGGLGERVLG 528
Query: 554 FACK---RVEQ-----QNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIK 605
F C EQ Q + + + L ++GL+ + + V A+ CR SAGIK
Sbjct: 529 F-CHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCR-SAGIK 586
Query: 606 IKLILEDDINIARLIAINSGLILKPGAE-------------DHSNGYDA--AVIEASVFR 650
+ ++ D A+ IA G+I G E N DA V+ S +
Sbjct: 587 VIMVTGDHPITAKAIAKGVGII-SEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK 645
Query: 651 S-SSEETRSLMVDNVR-VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG 708
+SE+ ++ + V A SP KL++V+ +++G +VAVTG D+P+LK+AD+G
Sbjct: 646 DMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG 705
Query: 709 VSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNL 768
V++G + ++ +D+++LD+NF +I ++ GR + +N++K I LT N L
Sbjct: 706 VAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 765
Query: 769 VAAIFCGEIPLEPFQLLWVNLIMDVLGALALA 800
+ I +PL +L ++L D++ A++LA
Sbjct: 766 IFIIANIPLPLGTITILCIDLGTDMVPAISLA 797
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 3e-25
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 776 EIPLEPFQLLWVNLIMDVLGALALAA-PVSLRV--QLPAHATAAASASPLANKTVWRNII 832
+PL P Q+LW+NL+ D L ALAL P + + P PL ++ + R I+
Sbjct: 1 PLPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKE-----PLFSRKLLRRIL 55
Query: 833 LQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEG 892
LQ L V G + + + FN+ VL Q+F +NAR +
Sbjct: 56 LQGLLIAIVTLLVFFLGLLGFGISE-SGLAQTMAFNTLVLSQLFNALNARSLRRSLFK-- 112
Query: 893 KGLHQNPWFLVIVGFIFILDIAVIEM--VTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVA 950
GL N L+ V +L + +I + + V T + L+ W + +G+A++ L +
Sbjct: 113 IGLFSNKLLLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELR 172
Query: 951 K 951
K
Sbjct: 173 K 173
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 94.6 bits (236), Expect = 8e-22
Identities = 49/185 (26%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 129 MVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVV 188
++ V+I++++ +R + + L K+ A V+RDG+ +I E+VVGD+V
Sbjct: 3 LLLVLINALLEAYQEYR-ARKALKAL---KKLLPPTAATVIRDGKEEEIPADELVVGDIV 58
Query: 189 CLQTGDQVPADGLFVHGKNLKLD----DGD------DKLPCIFTGAKVVGGECSMLVTSV 238
L+ GD+VPADG + G +L++D G+ + +F G V+ GE ++VT+
Sbjct: 59 LLKPGDRVPADGRIIEG-SLEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTAT 117
Query: 239 GENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCF 298
GE+TE + +L+ + ++ LQ +D++ + I L+L++LV ++
Sbjct: 118 GEDTELGKIARLVEEAKS------AKTPLQRLLDKLAKILVPIVLALAILVFLIWFFRGG 171
Query: 299 AWGDD 303
+ +
Sbjct: 172 DFLEA 176
|
Length = 222 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 99 bits (249), Expect = 3e-21
Identities = 160/781 (20%), Positives = 295/781 (37%), Gaps = 155/781 (19%)
Query: 58 ELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKR 117
E+ R FG N K P R + + + +L +S
Sbjct: 38 EVTERLAEFGPN----QTVEEKKVPNLRLLIR----AFNNPFIYILAMLMGVSY------ 83
Query: 118 NGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRA-AVKVMRDGRVR- 175
+ D V+I+ +V S L F++ R R A A+K M
Sbjct: 84 ------LTDDLEATVIIALMVLASGLLGFIQ--------ESRAERAAYALKNMVKNTATV 129
Query: 176 -------------QIAVSEVVVGDVVCLQTGDQVPAD-------GLFVH-----GKNLKL 210
++ + +V GD++ L GD +PAD LF++ G++L +
Sbjct: 130 LRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPV 189
Query: 211 D------DGDDKLP-----CIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINR 259
+ D F G V+ G +V + G +T L +
Sbjct: 190 EKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAAT------- 242
Query: 260 QDYKESKLQISVDRMGSRMEKIWLSLSL-LVIVVQVLGCFAWGDDDHDPEPKGGVRSTVK 318
E + Q + D+ + K+ + L +V VV ++ GD
Sbjct: 243 ----ERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGD---------------- 282
Query: 319 EIMGEVVTKFIRRQGATSHNRYVEM----LSILVFVSRDGLLPIGLFICLAYASKKLPCF 374
++E L++ V ++ + +LP+ + LA + +
Sbjct: 283 ---------------------WLEAFLFALAVAVGLTPE-MLPMIVSSNLAKGAINMSKK 320
Query: 375 RATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREA 434
+ + L + G + +CT KT L+ D EL D+S S L+ A
Sbjct: 321 KVIVKELSAIQNFGAMDILCTDKTGTLTQDKI---ELEKHIDSSGETSERV-----LKMA 372
Query: 435 IATTSYDEAAVDD-DDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSES 493
+ + + D A+L E + F+ + R ++++
Sbjct: 373 WLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVE------ 426
Query: 494 DGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCIS 553
+ + +G+ E +L++CTH G + TL E ++ + ++ N +R I+
Sbjct: 427 NRAEVTRLICKGAVEEMLTVCTH-KRFGGAVVTLSESEKSELQDMTAEM--NRQGIRVIA 483
Query: 554 FACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDD 613
A K ++ E + + E L G + K+AI ++ GI +K++ D+
Sbjct: 484 VATKTLKV-GEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKN-GINVKVLTGDN 541
Query: 614 INIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPL 673
+ I G+ A D G D IE S+E + + + A +P+
Sbjct: 542 EIVTARICQEVGI----DANDFLLGAD---IEEL-----SDEELARELRKYHIFARLTPM 589
Query: 674 DKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFT 733
K ++ LK+ G V G DAP+L++ADVG+S+ + +A A++ SDI++L+++
Sbjct: 590 QKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV-DTAADIAKEASDIILLEKSLM 648
Query: 734 TIAANLKWGRCVCNNIRKFIQLHLTVN-AAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMD 792
+ + GR NI K++++ + N F+V LVA+ F +P+ LL NL+ D
Sbjct: 649 VLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSV-LVASAFIPFLPMLSLHLLIQNLLYD 707
Query: 793 V 793
Sbjct: 708 F 708
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 95.5 bits (238), Expect = 4e-20
Identities = 141/612 (23%), Positives = 235/612 (38%), Gaps = 152/612 (24%)
Query: 167 KVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDG---DDKLPC---- 219
+V+RDG+ ++I SE+V GDVV L+ GD VPAD G +++D + LP
Sbjct: 95 RVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKT 154
Query: 220 ---IFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGS 276
++G+ V GE +VT+ G NT L+ + LQ + ++G
Sbjct: 155 GDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTET------GSGHLQKILSKIGL 208
Query: 277 RMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATS 336
+ L +++++ E+V F R
Sbjct: 209 ----FLIVLIGVLVLI------------------------------ELVVLFFGR----- 229
Query: 337 HNRYVEMLSILVFVSRDGL---LPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAI 393
+ E L + + G+ +P L + +A + +L +A L L + +
Sbjct: 230 GESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDIL 289
Query: 394 CTGKTSDLSLDHANMAELWIATDNSFI-KSTSADVLDALREAIATTSYDEAAVDDDDALL 452
C+ KT L+L+ +L I F DVL L A+A+ D+ A+D A+L
Sbjct: 290 CSDKTGTLTLN-----KLSIDEILPFFNGFDKDDVL--LYAALASREEDQDAIDT--AVL 340
Query: 453 LWAKEFLDVDGDKMKQNCTVEAFN-ISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIIL 511
AK+ L D K V F+ + K + E +G+P++IL
Sbjct: 341 GSAKD-LKEARDGYKVLEFV-PFDPVDKRTEATV------EDPETGKRFKVTKGAPQVIL 392
Query: 512 SMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELT 571
+C + K +E++ EE++ EL
Sbjct: 393 DLCDNK---------------------------------------KEIEEKVEEKVDELA 413
Query: 572 ECGLTWLGLVRLKSAYASE-------------------VKQAIEDCRESAGIKIKLILED 612
G LG+ A E K+ IE R G+++K++ D
Sbjct: 414 SRGYRALGV-----ARTDEEGRWHFLGLLPLFDPPRHDTKETIERARH-LGVEVKMVTGD 467
Query: 613 DINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASP 672
+ IA+ A GL +N Y A V+ R MV++ A P
Sbjct: 468 HLAIAKETARRLGL--------GTNIYTADVLLKGDNRDDLPSGLGEMVEDADGFAEVFP 519
Query: 673 LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSI-GERSAQFARDCSDIVILDEN 731
K +V+ L+++G +V +TG DAP+LK+ADVG+++ G A AR +DIV+ +
Sbjct: 520 EHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPG 577
Query: 732 FTTIAANLKWGR 743
+ I + R
Sbjct: 578 LSVIVDAILESR 589
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 1e-14
Identities = 71/293 (24%), Positives = 136/293 (46%), Gaps = 24/293 (8%)
Query: 504 RGSPEIILSMCTHYLDRHGT-LQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRV-EQ 561
+G+ E IL++C+ RH + LD+ + N LR ++ A K + +
Sbjct: 472 KGALEEILNVCSQV--RHNGEIVPLDDIMLRRIKRVTDTL--NRQGLRVVAVATKYLPAR 527
Query: 562 QNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIA 621
+ + + + E L G + A++ + S G+ +K++ D +A +
Sbjct: 528 EGDYQRAD--ESDLILEGYIAFLDPPKETTAPALKALKAS-GVTVKILTGDSELVAAKVC 584
Query: 622 INSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQC 681
GL V+ S + S++ + + + + A +P+ K +V
Sbjct: 585 HEVGL-----DAGE-------VLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTL 632
Query: 682 LKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741
LK++G VV G DAP+L+ AD+G+S+ + + AR+ +DI++L+++ + +
Sbjct: 633 LKREGHVVGFMGDGINDAPALRAADIGISV-DGAVDIAREAADIILLEKSLMVLEEGVIE 691
Query: 742 GRCVCNNIRKFIQLHLTVN-AAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDV 793
GR N+ K+I++ + N F+V LVA+ F +P+ P LL NL+ DV
Sbjct: 692 GRRTFANMLKYIKMTASSNFGNVFSV-LVASAFLPFLPMLPLHLLIQNLLYDV 743
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 1e-12
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 34/299 (11%)
Query: 504 RGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQN 563
+G+ E +L++ TH D T++ LDE +R+ N R + A + +
Sbjct: 470 KGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAY--NADGFRVLLVATREIPGGE 526
Query: 564 EEEIIELT-ECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDD----INIAR 618
E L G + AI RE+ G+ +K++ D+ I R
Sbjct: 527 SRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALREN-GVAVKVLTGDNPIVTAKICR 585
Query: 619 LIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLM 678
+ + G L G E IEA + + V+ V A +PL K +
Sbjct: 586 EVGLEPGEPLL-GTE----------IEAM-----DDAALAREVEERTVFAKLTPLQKSRV 629
Query: 679 VQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAAN 738
++ L+ G V G DAP+L++ADVG+S+ + A A++ +DI++L+++ +
Sbjct: 630 LKALQANGHTVGFLGDGINDAPALRDADVGISV-DSGADIAKESADIILLEKSLMVLEEG 688
Query: 739 LKWGRCVCNNIRKFIQLHLTVN-AAAFAVNLVAAIFCGEIPLEPF---QLLWVNLIMDV 793
+ GR NI K++ + + N F+V LVA+ F IP P LL NL+ D+
Sbjct: 689 VIKGRETFGNIIKYLNMTASSNFGNVFSV-LVASAF---IPFLPMLAIHLLLQNLMYDI 743
|
Length = 903 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 6e-12
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 657 RSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSA 716
L +D V A P DKL +V+ L+++G VVA+ G DAP+L ADVG+++G S
Sbjct: 420 AELGIDEVH--AELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSD 477
Query: 717 QFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGE 776
A + +DIV+L+++ +++ + R I++ + L N A + A G
Sbjct: 478 -VAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVA----IPLAAG-GL 531
Query: 777 IPL 779
+PL
Sbjct: 532 LPL 534
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 8e-11
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 657 RSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSA 716
+ L +D VR A P DK +V+ L+ +G VA+ G DAP+L ADVG+++G +
Sbjct: 572 KELGIDEVR--AELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTD 629
Query: 717 QFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIF 773
A + +D+V++ ++ + + + R I++ + NA A + A
Sbjct: 630 -VAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIA----IPLAAG 681
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 1e-10
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 657 RSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSA 716
+ L ++NVR A P DK +++ L++KG+VVA+ G DAP+L +ADVG++IG
Sbjct: 449 KELGIENVR--AEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIGA-GT 505
Query: 717 QFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIF 773
A + +D+V+L + +A + R I++ + N A+ + A +
Sbjct: 506 DVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYN--VIAIPIAAGVL 560
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 5e-10
Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 15/177 (8%)
Query: 632 AEDHSNGYDAAVIEASVFRSSSEET-RSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVA 690
AE + G + V+ R+ +E R L +D V A P DKL +V+ L++K VA
Sbjct: 372 AELKALGIEKVVMLTGDRRAVAERVARELGIDEVH--AELLPEDKLEIVKELREKYGPVA 429
Query: 691 VTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIR 750
+ G DAP+L ADVG+++G + A + +D+V+L+++ + + ++ R ++
Sbjct: 430 MVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVK 489
Query: 751 KFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRV 807
+ + + L + ++ A+F G +P LW+ ++ + L +LR+
Sbjct: 490 QNVVIALGIILLL----ILLALF-GVLP------LWLAVLGHEGSTV-LVILNALRL 534
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 1e-09
Identities = 57/299 (19%), Positives = 107/299 (35%), Gaps = 82/299 (27%)
Query: 504 RGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEA-NHHSLRCISFACKRVEQQ 562
+G+PE I S+C +++ +++ R ++ A K + +
Sbjct: 584 KGAPETIQSLC---------------SPETVPSDYQEVLKSYTREGYRVLALAYKELPKL 628
Query: 563 NEEEIIELT----ECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIAR 618
++ +L+ E LT+LG + ++ + K+ I++ + A I+ +I D+ A
Sbjct: 629 TLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKR-ASIRTVMITGDNPLTAV 687
Query: 619 LIAINSGLILKPG------AEDHSNGYDAAVIEASV------------------------ 648
+A G++ AE +G + +
Sbjct: 688 HVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDL 747
Query: 649 -----------------FRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAV 691
S E L+ + V A +P K +V+ L++ V +
Sbjct: 748 LASRYHLAMSGKAFAVLQAHSPELLLRLLS-HTTVFARMAPDQKETLVELLQKLDYTVGM 806
Query: 692 TGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIR 750
G D +LK+ADVG+S+ E A A FT+ A++ CV N IR
Sbjct: 807 CGDGANDCGALKQADVGISLSEAEASVA----------APFTSKLASIS---CVPNVIR 852
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 3e-07
Identities = 61/325 (18%), Positives = 118/325 (36%), Gaps = 46/325 (14%)
Query: 133 VISSVVCISSLFRFVKNWINE-LLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQ 191
VIS+++ ++ L F++ + E + S + V+R+G+ I ++V GD+ L+
Sbjct: 86 VISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLK 145
Query: 192 TGDQVPADGLFVHGKNLKLDDG-------------------------DDKLPCIFTGAKV 226
TGD +PAD + KN D+ D++ F+ + V
Sbjct: 146 TGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAV 205
Query: 227 VGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLS 286
G + + N+E + L D + ++ K+ D R W+
Sbjct: 206 TKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKD-------DPNKRRKLNKWILKV 258
Query: 287 LLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSH-NRYVEMLS 345
+ LG + P + + V ++ I ++ V + +
Sbjct: 259 TKKVTGAFLGL-----NVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYA 313
Query: 346 ILVFVSRDGLLPIGLF----ICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDL 401
I + +S ++P L I +A + + R L +LG V IC+ KT +
Sbjct: 314 ICLAIS---IIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTI 370
Query: 402 SLDHANMAELWIATDNSFIKSTSAD 426
+ ++WI + S D
Sbjct: 371 TQGKMIARQIWIPRFGTISIDNSDD 395
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 4e-07
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 661 VDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFAR 720
VD +A A+P DKL +++ + +G +VA+TG T DAP+L +ADVGV++ Q A+
Sbjct: 486 VD--DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNS-GTQAAK 542
Query: 721 DCSDIVILDENFTTI 735
+ +++V LD N T +
Sbjct: 543 EAANMVDLDSNPTKL 557
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 2e-06
Identities = 26/69 (37%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIV 726
+A A+P DK+ +++ + +G++VA+TG T DAP+L +ADVGV++ Q A++ +++V
Sbjct: 489 IAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNS-GTQAAKEAANMV 547
Query: 727 ILDENFTTI 735
LD + T +
Sbjct: 548 DLDSDPTKL 556
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 7e-06
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 56/159 (35%)
Query: 132 VVISSVVCISSLFRFVKNWINELLVSKRTSRRA-AVKVM--------------RDGRVRQ 176
++I ++V +S L RF + + R+++ A A+K M + R+
Sbjct: 115 IIILTMVLLSGLLRFWQEF--------RSNKAAEALKAMVRTTATVLRRGHAGAEPVRRE 166
Query: 177 IAVSEVVVGDVVCLQTGDQVPAD-------GLF---------------------VHGKNL 208
I + E+V GD+V L GD +PAD LF V GK+
Sbjct: 167 IPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSA 226
Query: 209 KLDDGDDK----LPCI-FTGAKVVGGECSMLVTSVGENT 242
D+ LP I F G VV G + +V + G T
Sbjct: 227 DALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265
|
Length = 903 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 1e-05
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 29/114 (25%)
Query: 153 ELLVSKRTSR----------RAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLF 202
E R R + A V DG ++ V EV VGD+V ++ G+++P DG+
Sbjct: 191 EARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVV 250
Query: 203 VHGKNLKLDD--------------GDDKLPCIFTGAKVVGGECSMLVTSVGENT 242
V G + +D+ GD+ +F G + G ++ VT VG +T
Sbjct: 251 VSGSSS-VDESMLTGESLPVEKKPGDE----VFAGTVNLDGSLTIRVTRVGADT 299
|
Length = 713 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 48.6 bits (117), Expect = 1e-05
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 668 ANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSI--GERSAQFARDCSDI 725
A A+P DKL +++ + +G +VA+TG T DAP+L +ADVGV++ G Q A++ ++
Sbjct: 489 AEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSG---TQAAKEAGNM 545
Query: 726 VILDENFT 733
V LD N T
Sbjct: 546 VDLDSNPT 553
|
Length = 679 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 3e-05
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 29/144 (20%)
Query: 165 AVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDD------------ 212
A + DG ++ V E+ VGD+V ++ G+++P DG+ + G++ +D+
Sbjct: 57 ARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESE-VDESALTGESMPVEK 115
Query: 213 --GDDKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQIS 270
GD+ +F G G ++ VT +GE++ + +++L+ ++ + SK I
Sbjct: 116 KEGDE----VFAGTINGDGSLTIRVTKLGEDSTLAQIVELV--------EEAQSSKAPIQ 163
Query: 271 --VDRMGSRMEKIWLSLSLLVIVV 292
DR+ S L+++LL VV
Sbjct: 164 RLADRIASYYVPAVLAIALLTFVV 187
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 4e-05
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 101 ILLLCCATLSLL-LGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKR 159
+LL A L L GI+ + E+ D + VV+S+VV I+ F + + +K
Sbjct: 76 MLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQE-------AKS 128
Query: 160 TSRRAAVK--------VMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLD 211
+ + K V+RDG I +VVVGD+V ++ GD++PAD + + K+D
Sbjct: 129 SKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVD 188
Query: 212 D 212
+
Sbjct: 189 N 189
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (111), Expect = 4e-05
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD 724
R +A P DK+ +++ + KG +VA+TG T DAP+L EA+VG+++ + A++ ++
Sbjct: 482 RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMS-AKEAAN 540
Query: 725 IVILDENFTTIAANLKWGR 743
++ LD N T + + G+
Sbjct: 541 LIDLDSNPTKLMEVVLIGK 559
|
Length = 673 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 8e-05
Identities = 34/139 (24%), Positives = 72/139 (51%), Gaps = 25/139 (17%)
Query: 168 VMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDD--------------G 213
V+R G + ++AV E+ VGDVV ++ G++VP DG+ + G + +D+ G
Sbjct: 59 VLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALTGESVPVEKAPG 117
Query: 214 DDKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDR 273
D+ +F GA + G +++VT + ++ + ++ L+ + +++K Q +DR
Sbjct: 118 DE----VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQS------RKAKTQRFIDR 167
Query: 274 MGSRMEKIWLSLSLLVIVV 292
+ L+++L + +V
Sbjct: 168 FARYYTPVVLAIALAIWLV 186
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 2e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 46/149 (30%)
Query: 132 VVISSVVCISSLFRFVKNWINELLVSKRTSRRA-AVKVM--------------RDGRVRQ 176
VI+ +V IS+L F++ R+++ A A+K M + +
Sbjct: 126 GVIALMVAISTLLNFIQ--------EARSTKAADALKAMVSNTATVLRVINDKGENGWLE 177
Query: 177 IAVSEVVVGDVVCLQTGDQVPAD-------GLFVH-----GKNLKLD--------DGDDK 216
I + ++V GD++ L GD +PAD LFV G++L ++ + +
Sbjct: 178 IPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNP 237
Query: 217 LPC---IFTGAKVVGGECSMLVTSVGENT 242
L C F G VV G +V + G NT
Sbjct: 238 LECDTLCFMGTNVVSGTAQAVVIATGANT 266
|
Length = 902 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-04
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 165 AVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGK---NLKLDDGDDKLPCIF 221
A + DG + ++ V + GD+V + G+++P DG + G+ + L G+
Sbjct: 93 ATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKK 152
Query: 222 TGAKVVGGECS------MLVTSVGENTETSMLMKLLSK 253
G V+ G + + T+ GE+T + +++L+ +
Sbjct: 153 VGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQ 190
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 8e-04
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 10/74 (13%)
Query: 37 IQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIK 96
++ + A L T+L+ G++ E E R + +G N L ++ K
Sbjct: 6 VEEVLARLGTDLEKGLTEAEAE--ERLEKYGPNELP--------EKKPKSLWKIFLRQFK 55
Query: 97 DSTVILLLCCATLS 110
D VI+LL A +S
Sbjct: 56 DPLVIILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.002
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 643 VIEASVFRSSS--EETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAP 700
+ AS R S + + + RV A A P K +++ LK++ E V + G D
Sbjct: 48 IYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDIL 107
Query: 701 SLKEADVGVSI--GERSAQFARDCSDIVILD 729
+L+EAD+G+ E + +D+V+ +
Sbjct: 108 ALREADLGICTIQQEGVPERLLLTADVVLKE 138
|
Length = 152 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 956 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.97 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.93 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.89 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.82 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.57 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.28 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.24 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.24 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.24 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.23 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.23 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.2 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.15 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.15 | |
| PLN02887 | 580 | hydrolase family protein | 99.13 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.1 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.07 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.06 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.03 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.99 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.99 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.93 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.92 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.91 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.83 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.81 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.77 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.74 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.72 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.68 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.61 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.52 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.39 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.37 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.36 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.33 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.32 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.21 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.21 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.12 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.11 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.09 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.03 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.99 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.97 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.96 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.91 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.87 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.85 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.85 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.76 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.74 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.73 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.72 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.61 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.46 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.44 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.43 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.43 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.43 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.3 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.11 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.1 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.06 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.99 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.97 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.96 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.95 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.86 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.86 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.84 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.84 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.82 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.78 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.67 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.59 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.55 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.54 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.48 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.47 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.36 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.35 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.18 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.17 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.14 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.13 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.08 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.06 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.0 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.0 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.98 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.84 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.74 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.73 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.65 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.64 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.62 | |
| PLN02940 | 382 | riboflavin kinase | 95.54 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.44 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.43 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.42 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.06 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.87 | |
| PLN03017 | 366 | trehalose-phosphatase | 94.81 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.8 | |
| PLN02423 | 245 | phosphomannomutase | 94.66 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.65 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.62 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.32 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.27 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.87 | |
| PLN02811 | 220 | hydrolase | 93.73 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.63 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.11 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.93 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 92.67 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.67 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.62 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.61 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 92.6 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 92.41 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 92.17 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.81 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.49 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 91.46 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 90.62 | |
| PLN02151 | 354 | trehalose-phosphatase | 90.25 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 90.17 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 89.61 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 89.54 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 89.36 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 88.3 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 87.14 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 86.83 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 86.52 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 85.87 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 85.71 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 85.18 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 84.5 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 84.38 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 82.56 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-160 Score=1344.26 Aligned_cols=884 Identities=35% Similarity=0.606 Sum_probs=827.5
Q ss_pred ccCHHHHHHhhccCChhHHhhhCCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHH
Q 043517 13 SIEQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLIS 92 (956)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~ 92 (956)
.++.|+|.++++++|+++|+.||+++++++.|+||+..||+.+.+|..+|++.||.|.+| +.++++||+++|
T Consensus 79 ~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p--------~k~~K~Fl~fvw 150 (1034)
T KOG0204|consen 79 GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYP--------EKPPKGFLRFVW 150 (1034)
T ss_pred ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCC--------CCCCccHHHHHH
Confidence 788899999999999999999999999999999999999999889999999999999999 899999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECC
Q 043517 93 DSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDG 172 (956)
Q Consensus 93 ~~~~~~~~~~ll~~~~ls~~~~~~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg 172 (956)
+.+++...++|.+|+++|+.+++...+..++|++++.|++.++++++++++.+|++++++++| + +++.+.++.|+|||
T Consensus 151 eA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L-~-~~k~~~k~~ViR~G 228 (1034)
T KOG0204|consen 151 EALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKL-Q-KEKRNIKFQVIRGG 228 (1034)
T ss_pred HHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhh-h-hhhhceEEEEEECC
Confidence 999999999999999999999998888889999999999999999999999999999999999 7 77788999999999
Q ss_pred EEEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC------------CCCCeEeeccEEeeeeEEEEEEEecC
Q 043517 173 RVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD------------DKLPCIFTGAKVVGGECSMLVTSVGE 240 (956)
Q Consensus 173 ~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~------------~~~~~l~~Gt~v~~g~~~~~V~~tG~ 240 (956)
+.++|+..|||||||+.|+.||.|||||++++|++|.+|||+ ++++++++||++.+|.++++|+++|.
T Consensus 229 ~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGm 308 (1034)
T KOG0204|consen 229 RRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGM 308 (1034)
T ss_pred EEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeee
Confidence 999999999999999999999999999999999999999999 46889999999999999999999999
Q ss_pred cChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC---CCCCCCcccch
Q 043517 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHD---PEPKGGVRSTV 317 (956)
Q Consensus 241 ~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 317 (956)
+|++|+++..+.... .++||+|-++++++..+..+.+.+|.+++++.+.+++.+....+. ..|... ..
T Consensus 309 nt~wG~~m~~l~~~~------~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~---~~ 379 (1034)
T KOG0204|consen 309 NTQWGIIMTLLGAGG------EEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDE---YI 379 (1034)
T ss_pred cchHhhHHHhhhcCC------CcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHH---HH
Confidence 999999999999888 899999999999999999999999999999999998876442222 234321 12
Q ss_pred hhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCc
Q 043517 318 KEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGK 397 (956)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DK 397 (956)
..++ ..+..+++++++|+|+| ||++++++++++++||.+.+.++|++++||++|+.++||+||
T Consensus 380 ~~~v----------------~~f~i~VTilVVAVPEG-LPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDK 442 (1034)
T KOG0204|consen 380 QEFV----------------KFFIIAVTILVVAVPEG-LPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDK 442 (1034)
T ss_pred HHHH----------------HHhhheeEEEEEECCCC-ccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecC
Confidence 2334 78888999999999999 999999999999999999999999999999999999999999
Q ss_pred cccccCCceEEEEEEecCccccc-----CCCCHHHHHHHHHHHHhcCCCCC-------------CCCcHHHHHHHHHhhc
Q 043517 398 TSDLSLDHANMAELWIATDNSFI-----KSTSADVLDALREAIATTSYDEA-------------AVDDDDALLLWAKEFL 459 (956)
Q Consensus 398 TGTLT~~~~~v~~i~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~-------------~~p~e~Al~~~~~~~~ 459 (956)
|||||+|+|+|.+.|+.++++.. ..++++..+++.++++.|++.+. .+|+|+||+.++. ++
T Consensus 443 TGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~-~L 521 (1034)
T KOG0204|consen 443 TGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGL-KL 521 (1034)
T ss_pred cCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHH-Hh
Confidence 99999999999999999887763 23788999999999999886542 2379999999999 89
Q ss_pred CCChhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHH
Q 043517 460 DVDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFN 536 (956)
Q Consensus 460 ~~~~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~ 536 (956)
|.+++..|..++ .+||+|.||+|+++++.+++ +. | +|+|||+|.++.+|+++.+.+|+..+++++.+..++
T Consensus 522 G~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~----~~-y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~ 595 (1034)
T KOG0204|consen 522 GMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDG----GH-Y-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFK 595 (1034)
T ss_pred CcchHhhcchhheeEEeccCcccceeeEEEEcCCC----Ce-E-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHH
Confidence 999999887666 99999999999999998875 44 5 999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccceeeeeEEeeccccc----hHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCC
Q 043517 537 NFIRDIEANHHSLRCISFACKRVEQQN----EEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILED 612 (956)
Q Consensus 537 ~~~~~~~~~~~G~rvl~~A~k~~~~~~----~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd 612 (956)
+.++.||+ +|+|++|+|||++...+ .....+..+.+++++|+++++||.|||++++|+.|+ +|||.|.|+|||
T Consensus 596 ~~Ie~mA~--~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq-~AGItVRMVTGD 672 (1034)
T KOG0204|consen 596 DVIEPMAS--EGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQ-RAGITVRMVTGD 672 (1034)
T ss_pred HHHHHHHH--hhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHH-HcCcEEEEEeCC
Confidence 99999999 99999999999965431 111235678999999999999999999999999999 999999999999
Q ss_pred CHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEE
Q 043517 613 DINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVT 692 (956)
Q Consensus 613 ~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~i 692 (956)
|..||++||.+||| ++++. +..+++|.+|+++++++++++.++.+|+||.+|.+|.-+|+.++++||+|+++
T Consensus 673 NI~TAkAIA~eCGI-Lt~~~-------d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVT 744 (1034)
T KOG0204|consen 673 NINTAKAIARECGI-LTPGG-------DFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVT 744 (1034)
T ss_pred cHHHHHHHHHHccc-ccCCC-------ccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEe
Confidence 99999999999999 77743 46999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043517 693 GMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAI 772 (956)
Q Consensus 693 GDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~ 772 (956)
|||.||+|||++||||.|||+.|+++||++||++++||||++|+++++|||+.|.||+|+++|+++.|+.++++.|+++.
T Consensus 745 GDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~ 824 (1034)
T KOG0204|consen 745 GDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSAC 824 (1034)
T ss_pred cCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh
Q 043517 773 FCGEIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGN 850 (956)
Q Consensus 773 ~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 850 (956)
..+.+||+++|+||+|++||.+.+++||+||| ++|+| +|+.++++++++.||++++.|++||.++++++.|.+.
T Consensus 825 ~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~R----kP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 825 ATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKR----KPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcC----CCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999999999999 99999 9999999999999999999999999999999999998
Q ss_pred hhhccc----cccccchhHHHHHHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 043517 851 ELLQVQ----ANKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGT 926 (956)
Q Consensus 851 ~~~~~~----~~~~~~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 926 (956)
..++.. ......+|++|++|+++|+||.++.|...+.++|+ ++++|++|+..+..++++|++++++++.+|+++
T Consensus 901 ~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFk--gi~~N~~F~~ii~~T~v~QviIveF~g~~~st~ 978 (1034)
T KOG0204|consen 901 SIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFK--GIFRNRLFCVIITITVVSQVIIVEFGGAFFSTT 978 (1034)
T ss_pred hhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHH--HHhcCceEEEEeeeeeehhhhhhhhcCcceeee
Confidence 887643 23557889999999999999999999998889999 999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHhhccCC
Q 043517 927 RMDLKDWCVCIGIAVMTLPTGLVAKCIPMP 956 (956)
Q Consensus 927 ~l~~~~~~~~~~~~~~~~~~~~i~k~~~~~ 956 (956)
|+++.+|++|+.++++.|++..++|.+|.|
T Consensus 979 ~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~ 1008 (1034)
T KOG0204|consen 979 PLSLTQWLWCIFIGVLSLPWGQLLKCIPVS 1008 (1034)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHheecccc
Confidence 999999999999999999999999999975
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-147 Score=1248.38 Aligned_cols=846 Identities=25% Similarity=0.384 Sum_probs=743.6
Q ss_pred CCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 043517 35 GRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLG 114 (956)
Q Consensus 35 ~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~ 114 (956)
.+++++++.|++|+++|||+ +|+.+|++.||.|+++ ..+..|+|+.+++||.+++..+|++++++||.+.
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~--~ev~~r~~~yG~Nel~--------~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~ 76 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTS--DEVTRRRKKYGENELP--------AEEGESLWKLVLEQFDNPLILILLLSAAISFVLA 76 (972)
T ss_pred CcHHHHHHHhCcCcccCCCH--HHHHHHHHhcCCccCc--------cccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999 9999999999999999 8999999999999999999999999999999998
Q ss_pred cccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCCC
Q 043517 115 IKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGD 194 (956)
Q Consensus 115 ~~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~ 194 (956)
. |.+++.|.+++++++++..++||+++|++++| +++.|+.++|+|+|+.+.++++||||||||.|+.||
T Consensus 77 ~--------~~e~~vI~liiv~nvtVG~~QEy~aEkalEaL---k~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGD 145 (972)
T KOG0202|consen 77 D--------FDEPFVITLIIVINVTVGFVQEYNAEKALEAL---KELVPPMAHVLRSGKLQHILARELVPGDIVELKVGD 145 (972)
T ss_pred h--------cccceeeeeeeeeeeeeeeeeehhhHHHHHHH---HhcCCccceEEecCcccceehhccCCCCEEEEecCC
Confidence 7 88999999999999999999999999999999 788999999999999999999999999999999999
Q ss_pred cccccEEEEeeCCceecccC------------------------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHh
Q 043517 195 QVPADGLFVHGKNLKLDDGD------------------------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKL 250 (956)
Q Consensus 195 ~vPaD~~ll~g~~l~vdes~------------------------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~ 250 (956)
+||||.||++..+|.+|||. ++.|++|+||.|..|+++|+|+.||.+|++|++.+.
T Consensus 146 kVPADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~ 225 (972)
T KOG0202|consen 146 KIPADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKM 225 (972)
T ss_pred ccccceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHH
Confidence 99999999999999999999 568899999999999999999999999999999999
Q ss_pred hcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhh
Q 043517 251 LSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIR 330 (956)
Q Consensus 251 ~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (956)
++..+ ..+||+|++++++.+++..+..++++.+.++. ++++. ++-+...|. ....
T Consensus 226 m~~~e------~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~n-ig~f~--~p~~~g~~f-------k~~~--------- 280 (972)
T KOG0202|consen 226 MQATE------SPKTPLQKKLDEFGKQLSKVISFICVGVWLLN-IGHFL--DPVHGGSWF-------KGAL--------- 280 (972)
T ss_pred HhccC------CCCCcHHHHHHHHHHHHHHHheehhhhHHHhh-hhhhc--cccccccch-------hchh---------
Confidence 99888 88999999999999999966666655554442 23333 111222232 2334
Q ss_pred ccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEE
Q 043517 331 RQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAE 410 (956)
Q Consensus 331 ~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~ 410 (956)
..|..++++.+++||+| ||++++++++.|.+||+|++++||+++++|+||.+++||+|||||||+|+|.+.+
T Consensus 281 -------~~f~IaVsLAVAAIPEG-LPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~ 352 (972)
T KOG0202|consen 281 -------YYFKIAVSLAVAAIPEG-LPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSK 352 (972)
T ss_pred -------hhhhHHHHHHHHhccCC-CcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEE
Confidence 78899999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcccccC--------------------------CCCHHHHHHHHHHHHhcCCCCC-----------CCCcHHHHHH
Q 043517 411 LWIATDNSFIK--------------------------STSADVLDALREAIATTSYDEA-----------AVDDDDALLL 453 (956)
Q Consensus 411 i~~~~~~~~~~--------------------------~~~~~~~~~l~~~~~~~~~~~~-----------~~p~e~Al~~ 453 (956)
+++.+...... ....+..+.+...+++|+.+.. .+|+|.||..
T Consensus 353 i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~v 432 (972)
T KOG0202|consen 353 IFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIV 432 (972)
T ss_pred EEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHH
Confidence 99875432110 0122334556667778876542 3489999999
Q ss_pred HHHhhcCCChhh--hc-------------ccc---cccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhch
Q 043517 454 WAKEFLDVDGDK--MK-------------QNC---TVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCT 515 (956)
Q Consensus 454 ~~~~~~~~~~~~--~~-------------~~~---~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~ 515 (956)
+++ ++|+.... .. +.+ .++||+++||+|+|.+..+.++ .. +.+|+|||+|.++++|+
T Consensus 433 lae-Km~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~---~~-~~~fvKGA~E~Vl~rcs 507 (972)
T KOG0202|consen 433 LAE-KMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQ---SG-YKMFVKGAPESVLERCS 507 (972)
T ss_pred HHH-HcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCC---cc-ceEEecCChHHHHHhhh
Confidence 999 88875422 11 111 1899999999999999866541 23 67999999999999998
Q ss_pred hccccCC-ccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccc-cch------HHHHhhhccCcEEEEEeeecccC
Q 043517 516 HYLDRHG-TLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQ-QNE------EEIIELTECGLTWLGLVRLKSAY 587 (956)
Q Consensus 516 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~-~~~------~~~~~~~e~~l~~lGli~~~d~l 587 (956)
++...+| ...||++..|+.+.+...+|++ +|+||+|+|+++... .+. ...+..+|+||+|+|++|+.|||
T Consensus 508 ~~~~~~g~~~~pLt~~~re~il~~~~~~g~--~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPP 585 (972)
T KOG0202|consen 508 TYYGSDGQTKVPLTQASRETILANVYEMGS--EGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPP 585 (972)
T ss_pred cEEccCCceeeeCcHHHHHHHHHHHHHHhh--ccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCC
Confidence 8887666 5599999999999999999999 999999999997763 221 11367789999999999999999
Q ss_pred cHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEE
Q 043517 588 ASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVM 667 (956)
Q Consensus 588 r~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ 667 (956)
|++++++|+.|+ ++||||+|+|||+..||.+||+++|+ ...+. +-...+++|++++.++++++++...++.+|
T Consensus 586 R~ev~~ai~~c~-~aGIrV~mITGD~~~TA~AI~r~iGi-~~~~e-----d~~~~~~TG~efD~ls~~~~~~~~~~~~vF 658 (972)
T KOG0202|consen 586 RPEVADAIELCR-QAGIRVIMITGDNKETAEAIAREIGI-FSEDE-----DVSSMALTGSEFDDLSDEELDDAVRRVLVF 658 (972)
T ss_pred chhHHHHHHHHH-HcCCEEEEEcCCCHHHHHHHHHHhCC-CcCCc-----cccccccchhhhhcCCHHHHHHHhhcceEE
Confidence 999999999999 99999999999999999999999999 54421 125689999999999999999999999999
Q ss_pred EecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHH
Q 043517 668 ANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCN 747 (956)
Q Consensus 668 ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~ 747 (956)
+|++|++|.+||+.||++|++|+|+|||+||+||||.||+|||||.+|+++||++||+|+.||||++|+.+++|||++|+
T Consensus 659 aR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~Iyn 738 (972)
T KOG0202|consen 659 ARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYN 738 (972)
T ss_pred EecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCCCCCCcch
Q 043517 748 NIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAASASPLANK 825 (956)
Q Consensus 748 ~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~~l~~~ 825 (956)
||++++.|+++.|+.++.+.++++.+..+.|++|+|+||+|+++|.+|+.+|++||+ |+|++ |||+++++++++
T Consensus 739 Nik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~k----pPR~~~~~iit~ 814 (972)
T KOG0202|consen 739 NIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKK----PPRDSKDGIITG 814 (972)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhC----CCCCCCCCeeeH
Confidence 999999999999999999999999999999999999999999999999999999999 99999 999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccc-----------------------cccccchhHHHHHHHHHHHHHHHHHh
Q 043517 826 TVWRNIILQVLYQVFVLSATQLKGNELLQVQ-----------------------ANKTDLKAIVFNSFVLCQVFVLINAR 882 (956)
Q Consensus 826 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~t~~f~~l~~~~~~~~~~~~ 882 (956)
+++..++..+++..+.++..+++.....+.. .......|++|.++++...||.++++
T Consensus 815 ~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~ 894 (972)
T KOG0202|consen 815 WLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCL 894 (972)
T ss_pred HHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcc
Confidence 9999888887776654443322111100100 11224568999999999999999999
Q ss_pred hccccccccccCCCchhHHHHHHHHHHHHHHHHHH--HHHhhccccCCChhhHHHHHHHHHHHHHHHHHHhhcc
Q 043517 883 EIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIE--MVTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCIP 954 (956)
Q Consensus 883 ~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~i~k~~~ 954 (956)
+.. .+.|. .++|+|+||.+++.++++++++++| +++.+|++.|+++.+|++++.+++.+++++|++||+.
T Consensus 895 se~-~slf~-~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~ 966 (972)
T KOG0202|consen 895 SEN-KSLFT-MPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIA 966 (972)
T ss_pred cCC-cceEE-ecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 854 56777 7999999999999999999987654 5999999999999999999999999999999999974
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-135 Score=1264.21 Aligned_cols=882 Identities=31% Similarity=0.536 Sum_probs=773.7
Q ss_pred cccCCccccCHHHHHHhhcc-CChhHHhhhCCHHHHHHHhCCCCCCCCC--CcHHHHHHHHhccCCCccccccccCCCCC
Q 043517 6 DREFRRFSIEQETVKKLAEN-DSYTTFHQSGRIQAIAASLETNLDIGIS--GQEMELRRRRQVFGSNGLTLSLENNCKHP 82 (956)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~GLs--~~~~e~~~r~~~~G~N~~~~~~~~~~~~~ 82 (956)
++-+++|.++.+++.+..+. ++.+.+++||+++++++.|++|.++||| + +||++|+++||+|+++ .+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~--~ev~~r~~~yG~N~l~--------~~ 81 (941)
T TIGR01517 12 DNFTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSS--STLERREKVYGKNELP--------EK 81 (941)
T ss_pred hccCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCH--HHHHHHHHHhCCCCCC--------CC
Confidence 45578899999999998866 5789999999999999999999999999 7 9999999999999999 77
Q ss_pred CCchHHHHHHHHHhhHHHHHHHHHHHHHHHhccc-----cCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 043517 83 ASLHFGRLISDSIKDSTVILLLCCATLSLLLGIK-----RNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVS 157 (956)
Q Consensus 83 ~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~~~-----~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~ 157 (956)
+++++|+++++||++|++++|+++++++++.+.. ..+....|+++++++++++++.+++++++|+++++.+++ +
T Consensus 82 ~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l-~ 160 (941)
T TIGR01517 82 PPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQL-N 160 (941)
T ss_pred CCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH-H
Confidence 8889999999999999999999999999987631 233345799999999999999999999999999999999 3
Q ss_pred hhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC------------CCCCeEeeccE
Q 043517 158 KRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD------------DKLPCIFTGAK 225 (956)
Q Consensus 158 ~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~------------~~~~~l~~Gt~ 225 (956)
+...+.+++|+|||++++|+++||||||+|.|++||+|||||+|++|+.+.||||. ++.|++|+||.
T Consensus 161 -~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~ 239 (941)
T TIGR01517 161 -REKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTV 239 (941)
T ss_pred -hccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCe
Confidence 33457799999999999999999999999999999999999999999777999999 34568999999
Q ss_pred EeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 043517 226 VVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDH 305 (956)
Q Consensus 226 v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~ 305 (956)
|.+|++.++|++||.+|++||+++++.+.+ +++|+++.++++.+++..++++++++++++++..++......+
T Consensus 240 v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-------~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~ 312 (941)
T TIGR01517 240 VNEGSGRMLVTAVGVNSFGGKLMMELRAEG-------EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGD 312 (941)
T ss_pred EEeeEEEEEEEEeCCCcHHHHHHHhhccCC-------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 999999999999999999999999887754 4679999999999999999988888888876544332210000
Q ss_pred CCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccc
Q 043517 306 DPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCS 385 (956)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e 385 (956)
..... ....++. ..+..++++++++|||+ ||++++++++.++++|+|+|+++|+++++|
T Consensus 313 ~~~~~----~~~~~~~----------------~~~~~al~llv~~iP~~-Lp~~vti~l~~~~~~mak~~ilvk~l~a~E 371 (941)
T TIGR01517 313 GRDTE----EDAQTFL----------------DHFIIAVTIVVVAVPEG-LPLAVTIALAYSMKKMMKDNNLVRHLAACE 371 (941)
T ss_pred ccccc----hhhHHHH----------------HHHHHHHHHHHhhCCCc-hHHHHHHHHHHHHHHHHhCCCEEechHHhh
Confidence 00000 0001333 77889999999999999 999999999999999999999999999999
Q ss_pred cccceeEEeeCccccccCCceEEEEEEecCcccccCC----CCHHHHHHHHHHHHhcCCCC-----------CCCCcHHH
Q 043517 386 SLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKS----TSADVLDALREAIATTSYDE-----------AAVDDDDA 450 (956)
Q Consensus 386 ~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~-----------~~~p~e~A 450 (956)
+||++|+||||||||||+|+|+|++++..+..++.+. .++...+++..++++|+... ..+|+|.|
T Consensus 372 ~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~A 451 (941)
T TIGR01517 372 TMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECA 451 (941)
T ss_pred hccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHH
Confidence 9999999999999999999999999997654332211 22334556666666666533 24689999
Q ss_pred HHHHHHhhcCCChhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccC
Q 043517 451 LLLWAKEFLDVDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTL 527 (956)
Q Consensus 451 l~~~~~~~~~~~~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l 527 (956)
+++++. +.|.+....+..++ .+||+|++|+|+++++.++ ++ +++++|||||.++++|+++...+|...++
T Consensus 452 ll~~~~-~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~-----~~-~~~~~KGA~e~il~~c~~~~~~~g~~~~~ 524 (941)
T TIGR01517 452 LLGFLL-LLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSG-----GK-VREFRKGASEIVLKPCRKRLDSNGEATPI 524 (941)
T ss_pred HHHHHH-HcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCC-----Cc-EEEEEECChHHHHHhhhHHhhcCCCcccC
Confidence 999998 77776655444443 7899999999999998654 45 88999999999999999877667777888
Q ss_pred CHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEE
Q 043517 528 DEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIK 607 (956)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~ 607 (956)
++ .++++.+.++++++ +|+||+++|||+++.++... .+..|+|++|+|+++++||+|++++++|++|+ ++||+++
T Consensus 525 ~~-~~~~i~~~~~~~a~--~G~Rvl~~A~~~~~~~~~~~-~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~-~aGI~v~ 599 (941)
T TIGR01517 525 SD-DKDRCADVIEPLAS--DALRTICLAYRDFAPEEFPR-KDYPNGGLTLIGVVGIKDPLRPGVREAVQECQ-RAGITVR 599 (941)
T ss_pred cH-HHHHHHHHHHHHHh--cCCEEEEEEEEecCcccccc-ccccccCcEEEEEeeccCCCchhHHHHHHHHH-HCCCEEE
Confidence 87 78899999999999 99999999999886543321 23357899999999999999999999999999 9999999
Q ss_pred EEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCC
Q 043517 608 LILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGE 687 (956)
Q Consensus 608 m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~ 687 (956)
|+|||++.||.++|+++|| .++ ...+++|+++++++++++.+.+.++.||||++|+||.++|+.+|++|+
T Consensus 600 miTGD~~~tA~~iA~~~GI-~~~---------~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~ 669 (941)
T TIGR01517 600 MVTGDNIDTAKAIARNCGI-LTF---------GGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGE 669 (941)
T ss_pred EECCCChHHHHHHHHHcCC-CCC---------CceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCC
Confidence 9999999999999999999 544 457999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043517 688 VVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVN 767 (956)
Q Consensus 688 ~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~ 767 (956)
+|+|+|||+||+|||++||||||||.+|+|.|+++||+++.+|+|++|++++++||++++|+++++.|.+++|+..+++.
T Consensus 670 vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~ 749 (941)
T TIGR01517 670 VVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILT 749 (941)
T ss_pred EEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 043517 768 LVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSAT 845 (956)
Q Consensus 768 ~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~ 845 (956)
+++.++.+++|++++|++|+|+++|.+|++++++|+| ++|++ ||++++++++++.++..+++++++++++.+++
T Consensus 750 ~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~----~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~ 825 (941)
T TIGR01517 750 FVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDR----KPIGRNAPLISRSMWKNILGQAGYQLVVTFIL 825 (941)
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhC----CCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998899999999999999999999999999999 99999 99999999999999999999999999888777
Q ss_pred HHhhhhhhcccc-------ccccchhHHHHHHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHHHH
Q 043517 846 QLKGNELLQVQA-------NKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEM 918 (956)
Q Consensus 846 ~~~~~~~~~~~~-------~~~~~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 918 (956)
++.+..+++... ....++|++|++++++|+++.+++|+.+..++|+ ++++|++++.+++++++++++++++
T Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~--~~~~n~~~~~~~~~~~~l~~~~~~~ 903 (941)
T TIGR01517 826 LFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFE--GLFKNRIFVTIMGFTFGFQVIIVEF 903 (941)
T ss_pred HHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccc--cccccHHHHHHHHHHHHHHHHHHHH
Confidence 766554443211 2356899999999999999999999866556787 8899999999999999999999988
Q ss_pred HHhhccccCCChhhHHHHHHHHHHHHHHHHHHhhccC
Q 043517 919 VTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCIPM 955 (956)
Q Consensus 919 ~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~i~k~~~~ 955 (956)
++.+|++.|+++.+|+++++++++.+++.++.|++|+
T Consensus 904 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 904 GGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 8999999999999999999999999999999999985
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-131 Score=1229.40 Aligned_cols=843 Identities=20% Similarity=0.311 Sum_probs=716.7
Q ss_pred CCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 043517 35 GRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLG 114 (956)
Q Consensus 35 ~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~ 114 (956)
.+.+++++.|+|++.+|||+ +|+++|+++||+|+++ +++++++|+++++||++|++++|+++++++++.+
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~--~ea~~rl~~~G~N~l~--------~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~ 79 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTH--DEAQHRLKEVGENRLE--------ADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH 79 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCH--HHHHHHHHHcCCCCCC--------CCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh
Confidence 47899999999999899999 9999999999999999 7788999999999999999999999999999997
Q ss_pred cccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCCC
Q 043517 115 IKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGD 194 (956)
Q Consensus 115 ~~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~ 194 (956)
. |.++++|++++++++++++++|+++++++++| +...+++++|+|||++++|+++||||||||.|++||
T Consensus 80 ~--------~~~~~iIl~vv~in~~i~~~QE~~aekal~aL---~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd 148 (1053)
T TIGR01523 80 D--------WIEGGVISAIIALNILIGFIQEYKAEKTMDSL---KNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGD 148 (1053)
T ss_pred h--------HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---hccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCC
Confidence 6 99999999999999999999999999999999 456778999999999999999999999999999999
Q ss_pred cccccEEEEeeCCceecccC--------C-----------------CCCeEeeccEEeeeeEEEEEEEecCcChHHHHHH
Q 043517 195 QVPADGLFVHGKNLKLDDGD--------D-----------------KLPCIFTGAKVVGGECSMLVTSVGENTETSMLMK 249 (956)
Q Consensus 195 ~vPaD~~ll~g~~l~vdes~--------~-----------------~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~ 249 (956)
+|||||+|+++++|.||||+ + +.|++|+||.|++|++.++|++||.+|++|||++
T Consensus 149 ~VPAD~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~ 228 (1053)
T TIGR01523 149 TIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAA 228 (1053)
T ss_pred EeeccEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHH
Confidence 99999999999999999999 1 1378999999999999999999999999999999
Q ss_pred hhccccccc-c----c------------------------CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 043517 250 LLSKDDRIN-R----Q------------------------DYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAW 300 (956)
Q Consensus 250 ~~~~~~~~~-~----~------------------------~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~ 300 (956)
++...+... + . ...+||+|++++++++++..++++++++++++....+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~~--- 305 (1053)
T TIGR01523 229 GLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDV--- 305 (1053)
T ss_pred HHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---
Confidence 886432100 0 0 0125999999999999999888888877766531110
Q ss_pred CCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCccccc
Q 043517 301 GDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARN 380 (956)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~ 380 (956)
.. ..+.++++++++++|++ ||++++++++.+++||+++|++||+
T Consensus 306 -------------------~~----------------~~~~~av~l~Va~VPeg-Lp~~vti~La~g~~rMak~~~lVr~ 349 (1053)
T TIGR01523 306 -------------------DK----------------EVAIYAICLAISIIPES-LIAVLSITMAMGAANMSKRNVIVRK 349 (1053)
T ss_pred -------------------hH----------------HHHHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHhcCCEecc
Confidence 01 55678899999999999 9999999999999999999999999
Q ss_pred ccccccccceeEEeeCccccccCCceEEEEEEecCc----------ccccC-----------------------C-----
Q 043517 381 LPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATD----------NSFIK-----------------------S----- 422 (956)
Q Consensus 381 ~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~----------~~~~~-----------------------~----- 422 (956)
++++|+||++++||+|||||||+|+|+|+++|..+. .|.+. .
T Consensus 350 L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1053)
T TIGR01523 350 LDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEF 429 (1053)
T ss_pred chhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999987531 11000 0
Q ss_pred ------------CCHHHHHHHHHHHHhcCCCC------------CCCCcHHHHHHHHHhhcCCChh------hh------
Q 043517 423 ------------TSADVLDALREAIATTSYDE------------AAVDDDDALLLWAKEFLDVDGD------KM------ 466 (956)
Q Consensus 423 ------------~~~~~~~~l~~~~~~~~~~~------------~~~p~e~Al~~~~~~~~~~~~~------~~------ 466 (956)
..++..+.+..++++|+++. ..+|+|.||+.++. +.|++.. ..
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~-~~g~~~~~~~~~~~~~~~~~~ 508 (1053)
T TIGR01523 430 KDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAK-KFDLPHNALTGEEDLLKSNEN 508 (1053)
T ss_pred cccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHH-HcCCCcccccchhhhhhhccc
Confidence 00011233455666776533 24799999999998 7777421 11
Q ss_pred -------------ccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCC-ccccCCH
Q 043517 467 -------------KQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHG-TLQTLDE 529 (956)
Q Consensus 467 -------------~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~-~~~~l~~ 529 (956)
+..++ ++||+|+||||+++++.+++ ++ +++|+|||||.|+++|+++...+| ...++++
T Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~----~~-~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~ 583 (1053)
T TIGR01523 509 DQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHG----ET-YNIYAKGAFERIIECCSSSNGKDGVKISPLED 583 (1053)
T ss_pred cccccccccccccccccceEEEeccCCCCCeEEEEEEeCCC----CE-EEEEEeCChHHHHHhhhHhhcCCCCccccCCH
Confidence 11233 78999999999999986543 44 789999999999999998765444 5678999
Q ss_pred HHHHHHHHHHHHHhhccccceeeeeEEeeccccchH--------HHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhh
Q 043517 530 HKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEE--------EIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRES 601 (956)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~--------~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~ 601 (956)
+.++++.+.+++|++ +|+||+++|||.++.++.. ..++..|+||+|+|+++++||+|++++++|++|+ +
T Consensus 584 ~~~~~i~~~~~~~a~--~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~-~ 660 (1053)
T TIGR01523 584 CDRELIIANMESLAA--EGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCH-Q 660 (1053)
T ss_pred HHHHHHHHHHHHHHh--cCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHH-H
Confidence 999999999999999 9999999999988653211 1245678999999999999999999999999999 9
Q ss_pred CCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCC-CCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHH
Q 043517 602 AGIKIKLILEDDINIARLIAINSGLILKPGAEDH-SNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQ 680 (956)
Q Consensus 602 ~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~ 680 (956)
+||+++|+|||++.||.++|+++|| .+.+.... .......+++|.+++.++++++.+...++.||||++|+||.++|+
T Consensus 661 aGIkv~MiTGD~~~tA~~iA~~~Gi-~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~ 739 (1053)
T TIGR01523 661 AGINVHMLTGDFPETAKAIAQEVGI-IPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIE 739 (1053)
T ss_pred CCCEEEEECCCCHHHHHHHHHHcCC-CCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHH
Confidence 9999999999999999999999999 54321000 000135899999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 043517 681 CLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVN 760 (956)
Q Consensus 681 ~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n 760 (956)
.+|++|++|+|+|||+||+|||++||||||||.+|++.|+++||+++.+++|++|++++++||++|+|+++++.|.+++|
T Consensus 740 ~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~n 819 (1053)
T TIGR01523 740 ALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAEN 819 (1053)
T ss_pred HHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC-----CCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCCCCCCcchHHHHHHHH
Q 043517 761 AAAFAVNLVAAIFCG-----EIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAASASPLANKTVWRNIIL 833 (956)
Q Consensus 761 i~~~~~~~~~~~~~~-----~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~~l~~~~~~~~i~~ 833 (956)
+..+++.+++.++.. +.||+|+|+||+|+++|.+|+++|++||| ++|++ ||++++++++++.++..++.
T Consensus 820 i~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~----~Pr~~~~~l~~~~~~~~~~~ 895 (1053)
T TIGR01523 820 VAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDR----LPHDNEVGIFQKELIIDMFA 895 (1053)
T ss_pred HHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhc----CCCCCCccccCHHHHHHHHH
Confidence 999999888887742 46999999999999999999999999999 99999 99999999999999988888
Q ss_pred HHHHHHHHHHHHHHhhhhhh--c-----------cc-cccccchhHHHHHHHHHHHHHHHHHhhccccccccc-------
Q 043517 834 QVLYQVFVLSATQLKGNELL--Q-----------VQ-ANKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEG------- 892 (956)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~--~-----------~~-~~~~~~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~------- 892 (956)
.+++.++..+..+++....+ + .+ .....++|++|.+++++|+++++++|+.+ .++|+.
T Consensus 896 ~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~-~~~~~~~~~~~~~ 974 (1053)
T TIGR01523 896 YGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFD-NSFFNLHGIPDGD 974 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCc-hhhhhcCcccccc
Confidence 88887766665443211100 0 00 02346799999999999999999999854 334440
Q ss_pred -------cCCCchhHHHHHHHHHHHHHHHHH--HHHHh-hccccCCChhhHHHHHHHHHHHHHHHHHHhhc
Q 043517 893 -------KGLHQNPWFLVIVGFIFILDIAVI--EMVTV-VTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCI 953 (956)
Q Consensus 893 -------~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~~i~k~~ 953 (956)
.+.++|++++++++++++++++++ |.++. +|++.|+++ .|+++++++++.+++.|++||+
T Consensus 975 ~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~ 1044 (1053)
T TIGR01523 975 SNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCG 1044 (1053)
T ss_pred ccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 136799999999998888887665 45875 999999997 8999999999999999999976
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-126 Score=1181.91 Aligned_cols=815 Identities=24% Similarity=0.368 Sum_probs=719.3
Q ss_pred CCHHHHHHHhCCCCCCCCC-CcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHH-hhHHHHHHHHHHHHHHH
Q 043517 35 GRIQAIAASLETNLDIGIS-GQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSI-KDSTVILLLCCATLSLL 112 (956)
Q Consensus 35 ~~~~~~~~~l~~~~~~GLs-~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~-~~~~~~~ll~~~~ls~~ 112 (956)
.+.+++++.|++|+.+||| + +|+++|+++||+|+++ .++++++|+.+++|| ++|++++|+++++++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~--~ev~~r~~~~G~N~i~--------~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~ 76 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSS--QEASHRRAFHGWNEFD--------VEEDESLWKKFLSQFVKNPLILLLIASAVISVF 76 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcH--HHHHHHHHhcCCCcCC--------CCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHH
Confidence 3789999999999999999 7 8999999999999999 677899999999999 99999999999999999
Q ss_pred hccccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCC
Q 043517 113 LGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQT 192 (956)
Q Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~ 192 (956)
.+. |.+++.++++++++..++.++++++++++++| +...+.+++|+|||++++|+++||||||+|.|++
T Consensus 77 ~g~--------~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L---~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~ 145 (884)
T TIGR01522 77 MGN--------IDDAVSITLAILIVVTVGFVQEYRSEKSLEAL---NKLVPPECHLIREGKLEHVLASTLVPGDLVCLSV 145 (884)
T ss_pred Hcc--------hhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---hccCCCeeEEEECCEEEEEEHHHCccCCEEEecC
Confidence 986 99999998888899999999999999999999 4667889999999999999999999999999999
Q ss_pred CCcccccEEEEeeCCceecccC----------C--------------CCCeEeeccEEeeeeEEEEEEEecCcChHHHHH
Q 043517 193 GDQVPADGLFVHGKNLKLDDGD----------D--------------KLPCIFTGAKVVGGECSMLVTSVGENTETSMLM 248 (956)
Q Consensus 193 G~~vPaD~~ll~g~~l~vdes~----------~--------------~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~ 248 (956)
||+|||||++++|+++.||||+ . ++|++|+||.|.+|++.++|++||.+|.+|++.
T Consensus 146 Gd~IPaDg~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~ 225 (884)
T TIGR01522 146 GDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVF 225 (884)
T ss_pred CCEEeeeEEEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHH
Confidence 9999999999999888999998 1 135899999999999999999999999999999
Q ss_pred HhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHH
Q 043517 249 KLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKF 328 (956)
Q Consensus 249 ~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (956)
+++.+.+ ..++|+|+.++++++++.+++++++++++++. |+.+ . ++.
T Consensus 226 ~~v~~~~------~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~~------~-----------~~~------- 272 (884)
T TIGR01522 226 KMMQAIE------KPKTPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQG------K-----------DWL------- 272 (884)
T ss_pred HHhccCC------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhc------C-----------CHH-------
Confidence 9998877 78899999999999999887766555444442 3322 1 223
Q ss_pred hhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEE
Q 043517 329 IRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANM 408 (956)
Q Consensus 329 ~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v 408 (956)
..+..++++++++|||+ ||++++++++.+++||+|+|+++|+++++|+||++|+||||||||||+|+|+|
T Consensus 273 ---------~~~~~~v~llv~aiP~~-Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v 342 (884)
T TIGR01522 273 ---------EMFTISVSLAVAAIPEG-LPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTV 342 (884)
T ss_pred ---------HHHHHHHHHHHHHccch-HHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEE
Confidence 77889999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCcccc--------cCC------------CCHHHHHHHHHHHHhcCCCC--------CCCCcHHHHHHHHHhhcC
Q 043517 409 AELWIATDNSF--------IKS------------TSADVLDALREAIATTSYDE--------AAVDDDDALLLWAKEFLD 460 (956)
Q Consensus 409 ~~i~~~~~~~~--------~~~------------~~~~~~~~l~~~~~~~~~~~--------~~~p~e~Al~~~~~~~~~ 460 (956)
.+++..+..+. ... .++...+++ .++++|+++. ..+|+|.|+++++. +.|
T Consensus 343 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~-~~~ 420 (884)
T TIGR01522 343 TKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRIL-EAGNLCNNAKFRNEADTLLGNPTDVALIELLM-KFG 420 (884)
T ss_pred EEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHH-HHHhhhCCCeecCCCCCcCCChHHHHHHHHHH-HcC
Confidence 99987653211 000 011223333 4455666543 24699999999998 766
Q ss_pred CChhh-hcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHH
Q 043517 461 VDGDK-MKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFI 539 (956)
Q Consensus 461 ~~~~~-~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~ 539 (956)
.+... ..+...++||+|++|+|+++++...+ ++ +++++|||||.++.+|+++...+|...+++++.++++.+..
T Consensus 421 ~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~----~~-~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~ 495 (884)
T TIGR01522 421 LDDLRETYIRVAEVPFSSERKWMAVKCVHRQD----RS-EMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEA 495 (884)
T ss_pred cHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCC----Ce-EEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHH
Confidence 64211 11122389999999999999886433 45 88999999999999999988777888899999999999999
Q ss_pred HHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHH
Q 043517 540 RDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARL 619 (956)
Q Consensus 540 ~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ 619 (956)
++++. +|+||+++||+.+ +.+++|+|+++++||+||+++++|++|+ ++||+++|+|||++.||.+
T Consensus 496 ~~~a~--~G~rvl~~A~~~~------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~-~~Gi~v~miTGD~~~tA~~ 560 (884)
T TIGR01522 496 AEMAS--AGLRVIAFASGPE------------KGQLTFLGLVGINDPPRPGVKEAVTTLI-TGGVRIIMITGDSQETAVS 560 (884)
T ss_pred HHHHh--cCCEEEEEEEEcC------------CCCeEEEEEEeccCcchhHHHHHHHHHH-HCCCeEEEECCCCHHHHHH
Confidence 99999 9999999999865 2489999999999999999999999999 9999999999999999999
Q ss_pred HHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCH
Q 043517 620 IAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDA 699 (956)
Q Consensus 620 ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~ 699 (956)
+|+++|+ .+. ...+++|++++.++++++.+.+.+..||||++|+||.++|+.+|+.|++|+|+|||.||+
T Consensus 561 ia~~~Gi-~~~---------~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~ 630 (884)
T TIGR01522 561 IARRLGM-PSK---------TSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDA 630 (884)
T ss_pred HHHHcCC-CCC---------CCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccH
Confidence 9999999 433 445789999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 043517 700 PSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPL 779 (956)
Q Consensus 700 ~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl 779 (956)
|||++||||||||.+|++.++++||+++.+|+++.+++++++||++++|+++++.|.++.|+..+++.+++.++..+.|+
T Consensus 631 pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl 710 (884)
T TIGR01522 631 PALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPL 710 (884)
T ss_pred HHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCch
Confidence 99999999999997799999999999999999999999999999999999999999999999999988888888888999
Q ss_pred hHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 043517 780 EPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQA 857 (956)
Q Consensus 780 ~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
+++|+||+|+++|.+|++++++||| ++|++ ||++++++++++.++..+++++++++++.+++++.... .+ .
T Consensus 711 ~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~----~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~--~ 783 (884)
T TIGR01522 711 NAMQILWINILMDGPPAQSLGVEPVDKDVMRK----PPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQ-DG--V 783 (884)
T ss_pred hHHHHHHHHHHHHhhHHHHhccCCCChhHhhC----CCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHc-CC--c
Confidence 9999999999999999999999999 99999 99999999999999999999999888776655543211 11 1
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHHH--HHHhhccccCCChhhHHH
Q 043517 858 NKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIE--MVTVVTHGTRMDLKDWCV 935 (956)
Q Consensus 858 ~~~~~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~l~~~~~~~ 935 (956)
....++|++|++++++|++|.+++|+. +.++|+ .++++|+++++++++.+++++++++ +++.+|++.|+++.+|++
T Consensus 784 ~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~ 861 (884)
T TIGR01522 784 ITARDTTMTFTCFVFFDMFNALACRSQ-TKSVFE-IGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLF 861 (884)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHccC-Cccccc-cCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence 234578999999999999999999984 456776 5778999999999999999987775 589999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcc
Q 043517 936 CIGIAVMTLPTGLVAKCIP 954 (956)
Q Consensus 936 ~~~~~~~~~~~~~i~k~~~ 954 (956)
+++++++.+++.+++|++.
T Consensus 862 ~~~~~~~~~~~~~~~k~~~ 880 (884)
T TIGR01522 862 LLLITSSVCIVDEIRKKVE 880 (884)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999863
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-127 Score=1181.54 Aligned_cols=815 Identities=27% Similarity=0.425 Sum_probs=712.1
Q ss_pred CHH--HHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 043517 36 RIQ--AIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLL 113 (956)
Q Consensus 36 ~~~--~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~ 113 (956)
+++ ++...+.++...||++ +|+.+|++.||.|+++ ..+..++|..+++||++|+..+++++++++++.
T Consensus 27 ~~~~~~~~~~~~~~~~~GLs~--~e~~~r~~~~G~N~~~--------~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~ 96 (917)
T COG0474 27 SVERNELLLELFTSPTTGLSE--EEVKRRLKKYGPNELP--------EEKKRSLLKKFLRQFKDPFIILLLVAALLSAFV 96 (917)
T ss_pred ccchhhHHHhhcCCcccCCCH--HHHHHHHhhcCCcccc--------ccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445 8999999999999999 9999999999999999 788899999999999999999999999999999
Q ss_pred ccccCCCcccc----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEE
Q 043517 114 GIKRNGFEQGI----LDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVC 189 (956)
Q Consensus 114 ~~~~~~~~~~~----~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~ 189 (956)
+. | .++..++.+++++.++..+++++++++++++ +...+.+++|+|||++++|+++||||||||.
T Consensus 97 ~~--------~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~l---k~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~ 165 (917)
T COG0474 97 GD--------WVDAGVDAIVILLVVVINALLGFVQEYRAEKALEAL---KKMSSPKAKVLRDGKFVEIPASELVPGDIVL 165 (917)
T ss_pred hc--------ccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHH---HhhccCceEEEeCCcEEEecHHHCCCCcEEE
Confidence 86 5 5666888888899999999999999999999 5667889999999999999999999999999
Q ss_pred eCCCCcccccEEEEeeCCceecccC------------------------CCCCeEeeccEEeeeeEEEEEEEecCcChHH
Q 043517 190 LQTGDQVPADGLFVHGKNLKLDDGD------------------------DKLPCIFTGAKVVGGECSMLVTSVGENTETS 245 (956)
Q Consensus 190 l~~G~~vPaD~~ll~g~~l~vdes~------------------------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g 245 (956)
|++||+||||++|+++++|.||||+ +++|++|+||.|++|++.++|++||.+|++|
T Consensus 166 l~~gd~vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G 245 (917)
T COG0474 166 LEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFG 245 (917)
T ss_pred ECCCCccccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHH
Confidence 9999999999999999999999999 1258999999999999999999999999999
Q ss_pred HHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhh
Q 043517 246 MLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVV 325 (956)
Q Consensus 246 ~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (956)
++++.+.... ...+|+|+.++++.+.+..++++++++++++. ++.+. . .+.
T Consensus 246 ~ia~~~~~~~------~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~---~~~~~-----~-----------~~~---- 296 (917)
T COG0474 246 KIARLLPTKK------EVKTPLQRKLNKLGKFLLVLALVLGALVFVVG---LFRGG-----N-----------GLL---- 296 (917)
T ss_pred HHHHhhcccc------ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcC-----c-----------cHH----
Confidence 9999999875 58899999999999999999999999888885 22221 1 123
Q ss_pred HHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCc
Q 043517 326 TKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDH 405 (956)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~ 405 (956)
..+.++++++++++|++ ||+.++++++.++++|+++++++|+++++|+||++|+||+|||||||+|+
T Consensus 297 ------------~~~~~~v~l~va~IPeg-Lp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~ 363 (917)
T COG0474 297 ------------ESFLTALALAVAAVPEG-LPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNK 363 (917)
T ss_pred ------------HHHHHHHHHHHhccccc-hHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCe
Confidence 78999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecC--ccccc-CCCCHHHHHHHHHHHHhcCCCCC--------CCCcHHHHHHHHHhhcCC--Chhhhccccc-
Q 043517 406 ANMAELWIAT--DNSFI-KSTSADVLDALREAIATTSYDEA--------AVDDDDALLLWAKEFLDV--DGDKMKQNCT- 471 (956)
Q Consensus 406 ~~v~~i~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~~~~~--------~~p~e~Al~~~~~~~~~~--~~~~~~~~~~- 471 (956)
|+|++++..+ ..... ....+.....+..++++||+... .+|+|.||++++. +.|. +.......++
T Consensus 364 M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~-~~~~~~~~~~~~~~~~~ 442 (917)
T COG0474 364 MTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAE-KLGFSLDLSGLEVEYPI 442 (917)
T ss_pred EEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHH-hcCCcCCHHHHhhhcce
Confidence 9999999984 22110 00111222334566778886554 4799999999999 8887 6666655443
Q ss_pred --ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccc
Q 043517 472 --VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSL 549 (956)
Q Consensus 472 --~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~ 549 (956)
++||+|+||||+++++..+ ++ +++++|||||.|+++|++. +...+++++.++.+++..++|++ +||
T Consensus 443 ~~~~PFdS~rKrMsviv~~~~-----~~-~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~--~gl 510 (917)
T COG0474 443 LAEIPFDSERKRMSVIVKTDE-----GK-YILFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELAS--EGL 510 (917)
T ss_pred eEEecCCCCceEEEEEEEcCC-----Cc-EEEEEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHH--HHH
Confidence 8999999999999999554 45 8899999999999999976 67788999999999999999999 999
Q ss_pred eeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCccc
Q 043517 550 RCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILK 629 (956)
Q Consensus 550 rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~ 629 (956)
||+++|||..+..+.....+..|+|++|+|+++++||||++++++|+.|+ ++||+++|+||||+.||.+||++||+ ..
T Consensus 511 Rvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~-~AGI~v~MiTGD~~~TA~aIa~~~Gi-~~ 588 (917)
T COG0474 511 RVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELR-EAGIKVWMITGDHVETAIAIAKECGI-EA 588 (917)
T ss_pred HHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHH-HCCCcEEEECCCCHHHHHHHHHHcCC-CC
Confidence 99999999776655432237889999999999999999999999999999 99999999999999999999999999 33
Q ss_pred CCCCCCCCCCc--ceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc
Q 043517 630 PGAEDHSNGYD--AAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV 707 (956)
Q Consensus 630 ~~~~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv 707 (956)
+ . ..+++|.+++.++++++.+.++++.||||++|+||.++|+.+|++|++|+|||||+||+||||+|||
T Consensus 589 ~---------~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADV 659 (917)
T COG0474 589 E---------AESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADV 659 (917)
T ss_pred C---------CCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCc
Confidence 3 2 5699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCchHHHHHH
Q 043517 708 GVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGE-IPLEPFQLLW 786 (956)
Q Consensus 708 GIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~-~pl~~~q~l~ 786 (956)
|||||.+|+|++|++||+++.+++|..+..+++|||++|.|+++++.|.+++|+..+++.+++.++..+ .|++++|++|
T Consensus 660 GIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~ 739 (917)
T COG0474 660 GIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLW 739 (917)
T ss_pred cEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHH
Confidence 999998899999999999999999999999999999999999999999999999999999999888777 8999999999
Q ss_pred HHhhhhHHhHHhhccCcc--ccccCcccccCCCCCCCCcchHHHHH-HHHHHHHHHHHHHHHHHhhhhhhcc-cc----c
Q 043517 787 VNLIMDVLGALALAAPVS--LRVQLPAHATAAASASPLANKTVWRN-IILQVLYQVFVLSATQLKGNELLQV-QA----N 858 (956)
Q Consensus 787 ~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~~l~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~-~~----~ 858 (956)
+|+++|.+|+++++.+++ +.|++ +|++|.++++++..+.. ++..++..+++.++.+......+.. .. .
T Consensus 740 inll~d~~pa~~L~~~~~~~~~m~~----~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 815 (917)
T COG0474 740 INLLTDSLPALALGVEDPESDVMKR----PPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLF 815 (917)
T ss_pred HHHHHhhhhhheeecCCCccccccc----CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhH
Confidence 999999999999999985 99999 79999999999987777 5444444444443333322211110 00 1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHHHH--HH-hhccccCCChhhHHH
Q 043517 859 KTDLKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEM--VT-VVTHGTRMDLKDWCV 935 (956)
Q Consensus 859 ~~~~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~-~~f~~~~l~~~~~~~ 935 (956)
.....|+.|..++++|.++.+.+|+.. .++|. ..++.|+.++.+++++.+++++..+. .. ..|...|+++..|++
T Consensus 816 ~~~~~t~~f~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~ 893 (917)
T COG0474 816 QALLQTTAFTVLVLIQLLLTLAVRSRG-RPFLS-SLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLI 893 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc-cchhh-cccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHH
Confidence 566899999999999999999999743 34555 45789999999998888888776653 45 689999999888998
Q ss_pred HHHHHHHH
Q 043517 936 CIGIAVMT 943 (956)
Q Consensus 936 ~~~~~~~~ 943 (956)
++..+...
T Consensus 894 ~~~~~~~~ 901 (917)
T COG0474 894 AIAVALLL 901 (917)
T ss_pred HHHHHHHH
Confidence 88777444
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-126 Score=1186.33 Aligned_cols=849 Identities=21% Similarity=0.288 Sum_probs=719.5
Q ss_pred hhCCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 043517 33 QSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLL 112 (956)
Q Consensus 33 ~~~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~ 112 (956)
+-.+.+++++.|+++..+|||+ +|+++|+++||+|+++ +++++++|+.+++||++|++++++++++++++
T Consensus 18 ~~~~~~~~~~~l~t~~~~GLs~--~e~~~rl~~~G~N~l~--------~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~ 87 (997)
T TIGR01106 18 HKLSLDELERKYGTDLSKGLSA--ARAAEILARDGPNALT--------PPPTTPEWVKFCRQLFGGFSMLLWIGAILCFL 87 (997)
T ss_pred hhCCHHHHHHHhCcCcccCCCH--HHHHHHHHHhCCCCCC--------CCCCCCHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 3348999999999999999999 9999999999999999 77889999999999999999999999999776
Q ss_pred hcccc-----CCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcE
Q 043517 113 LGIKR-----NGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDV 187 (956)
Q Consensus 113 ~~~~~-----~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDi 187 (956)
..... .+....|+++++++++++++.+++.++++++++.++++ +...+.+++|+|||++++|+++||||||+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l---~~~~~~~~~ViRdg~~~~I~~~~lv~GDi 164 (997)
T TIGR01106 88 AYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESF---KNMVPQQALVIRDGEKMSINAEQVVVGDL 164 (997)
T ss_pred HHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccCCCeeEEEECCEEEEeeHHHCCCCCE
Confidence 53211 11223588999888888889999999999999999998 45678899999999999999999999999
Q ss_pred EEeCCCCcccccEEEEeeCCceecccC--------C------------CCCeEeeccEEeeeeEEEEEEEecCcChHHHH
Q 043517 188 VCLQTGDQVPADGLFVHGKNLKLDDGD--------D------------KLPCIFTGAKVVGGECSMLVTSVGENTETSML 247 (956)
Q Consensus 188 V~l~~G~~vPaD~~ll~g~~l~vdes~--------~------------~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i 247 (956)
|.|++||+|||||++++|+++.||||. . .+|++|+||.|.+|.+.++|++||.+|.+|++
T Consensus 165 v~l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i 244 (997)
T TIGR01106 165 VEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRI 244 (997)
T ss_pred EEECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHH
Confidence 999999999999999999888999999 1 13589999999999999999999999999999
Q ss_pred HHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHH
Q 043517 248 MKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTK 327 (956)
Q Consensus 248 ~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (956)
.+.+.+.+ .+++|+++.++++++.+..++++++++++++++. .+ . ++.
T Consensus 245 ~~~~~~~~------~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~-----------~~~------ 292 (997)
T TIGR01106 245 ASLASGLE------NGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---LG------Y-----------TWL------ 292 (997)
T ss_pred Hhhhhhcc------cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc------C-----------CHH------
Confidence 99888777 6789999999999999999988888777766422 21 1 222
Q ss_pred HhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceE
Q 043517 328 FIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHAN 407 (956)
Q Consensus 328 ~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~ 407 (956)
..+.+++++++++|||+ ||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+
T Consensus 293 ----------~~~~~~i~v~v~~iP~~-L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~ 361 (997)
T TIGR01106 293 ----------EAVIFLIGIIVANVPEG-LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMT 361 (997)
T ss_pred ----------HHHHHHHHHHhhcCCcc-chHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceE
Confidence 67788899999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCcccccCC--------CC--HHHHHHHHHHHHhcCCCC---------------CCCCcHHHHHHHHHhhcCCC
Q 043517 408 MAELWIATDNSFIKS--------TS--ADVLDALREAIATTSYDE---------------AAVDDDDALLLWAKEFLDVD 462 (956)
Q Consensus 408 v~~i~~~~~~~~~~~--------~~--~~~~~~l~~~~~~~~~~~---------------~~~p~e~Al~~~~~~~~~~~ 462 (956)
|.+++.++..+..+. .+ ....+.+..++++||++. ..+|+|.|+++++. +.+.+
T Consensus 362 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~-~~~~~ 440 (997)
T TIGR01106 362 VAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIE-LCLGS 440 (997)
T ss_pred EEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHH-HhCCC
Confidence 999998665432210 11 123334555677786532 23689999999998 55555
Q ss_pred hhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHH
Q 043517 463 GDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFI 539 (956)
Q Consensus 463 ~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~ 539 (956)
....+..++ .+||+|+||+|+++++..+. ++++ +++|+|||||.|+++|+++.. +|...+++++.++.+.+.+
T Consensus 441 ~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~--~~~~-~~~~~KGApe~Il~~c~~~~~-~g~~~~l~~~~~~~~~~~~ 516 (997)
T TIGR01106 441 VMEMRERNPKVVEIPFNSTNKYQLSIHENEDP--RDPR-HLLVMKGAPERILERCSSILI-HGKEQPLDEELKEAFQNAY 516 (997)
T ss_pred HHHHHhhCceeEEeccCCCCceEEEEEeccCC--CCce-EEEEEeCChHHHHHHhhHHhc-CCCcccCCHHHHHHHHHHH
Confidence 555554444 78999999999998864321 0134 889999999999999998874 7888899999999999999
Q ss_pred HHHhhccccceeeeeEEeeccccchHH-------HHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCC
Q 043517 540 RDIEANHHSLRCISFACKRVEQQNEEE-------IIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILED 612 (956)
Q Consensus 540 ~~~~~~~~G~rvl~~A~k~~~~~~~~~-------~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd 612 (956)
++|++ +|+||+++|||.++.++... ..+..|+|++|+|+++++||||++++++|++|+ ++||+++|+|||
T Consensus 517 ~~~a~--~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~-~~Gi~v~~~TGd 593 (997)
T TIGR01106 517 LELGG--LGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCR-SAGIKVIMVTGD 593 (997)
T ss_pred HHHHh--cCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHH-HCCCeEEEECCC
Confidence 99999 99999999999886532211 112348999999999999999999999999999 999999999999
Q ss_pred CHHHHHHHHHhcCCcccCCCCC---------------CCCCCcceeeechhhhcCCHHHHHhhhccce--EEEecChhhH
Q 043517 613 DINIARLIAINSGLILKPGAED---------------HSNGYDAAVIEASVFRSSSEETRSLMVDNVR--VMANASPLDK 675 (956)
Q Consensus 613 ~~~ta~~ia~~~Gi~~~~~~~~---------------~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~--v~ar~~p~~K 675 (956)
++.+|.++|+++|+ ++++.+. +..+....+++|.+++.++++++.+.+.++. ||||++|+||
T Consensus 594 ~~~ta~~ia~~~gi-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK 672 (997)
T TIGR01106 594 HPITAKAIAKGVGI-ISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQK 672 (997)
T ss_pred CHHHHHHHHHHcCC-CCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHH
Confidence 99999999999999 6543210 0011124799999999999999999988765 9999999999
Q ss_pred HHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHH
Q 043517 676 LLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQL 755 (956)
Q Consensus 676 ~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~ 755 (956)
.++|+.+|+.|++|+|+|||+||+||||+||||||||.+|++.+|++||+++.+|+|++|++++++||++|.|+++++.|
T Consensus 673 ~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~ 752 (997)
T TIGR01106 673 LIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAY 752 (997)
T ss_pred HHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCC-CCCCcchHHHHH-H
Q 043517 756 HLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAAS-ASPLANKTVWRN-I 831 (956)
Q Consensus 756 ~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~-~~~l~~~~~~~~-i 831 (956)
.++.|+..+++.+++.++..++|++++|+||+|+++|.+|++++++|++ ++|++ +|+++ .++++++.++.. +
T Consensus 753 ~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~----~P~~~~~~~l~~~~~~~~~~ 828 (997)
T TIGR01106 753 TLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKR----QPRNPKTDKLVNERLISMAY 828 (997)
T ss_pred HHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccC----CCcCCccccccCHHHHHHHH
Confidence 9999999999999999998899999999999999999999999999999 99999 99985 678998876654 4
Q ss_pred HHHHHHHHHHHHHHHHhhhh--------hhcc---------cc---c-------------cccchhHHHHHHHHHHHHHH
Q 043517 832 ILQVLYQVFVLSATQLKGNE--------LLQV---------QA---N-------------KTDLKAIVFNSFVLCQVFVL 878 (956)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~--------~~~~---------~~---~-------------~~~~~t~~f~~l~~~~~~~~ 878 (956)
+..+++++++.++.++.... .++. .+ . ...++|+.|.+++++|++++
T Consensus 829 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~ 908 (997)
T TIGR01106 829 GQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADL 908 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHH
Confidence 44466666555544432111 1110 00 0 01468999999999999999
Q ss_pred HHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHH--HHHHhhccccCCChhhHHHHHHHHHHHHHHHHHHhhc
Q 043517 879 INAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVI--EMVTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCI 953 (956)
Q Consensus 879 ~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~i~k~~ 953 (956)
+++|+. +.++|+ .+ ++|++++.++++.++++++++ +.++.+|++.|+++.+|+++++++++.+++.++.|++
T Consensus 909 ~~~R~~-~~~~f~-~~-~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~ 982 (997)
T TIGR01106 909 IICKTR-RNSVFQ-QG-MKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLI 982 (997)
T ss_pred HHhccC-cccccc-cC-CcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 456787 34 799999988888888776654 4489999999999999999999999999999999875
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-123 Score=1143.06 Aligned_cols=813 Identities=19% Similarity=0.233 Sum_probs=681.1
Q ss_pred CCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 043517 35 GRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLG 114 (956)
Q Consensus 35 ~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~ 114 (956)
.+.+++++.|+++. +|||+ +|+++|+++||+|+++ .++++++|+.+++||++|++++|+++++++++.+
T Consensus 30 ~~~~~v~~~l~~~~-~GLs~--~ea~~rl~~~G~N~l~--------~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~ 98 (903)
T PRK15122 30 NSLEETLANLNTHR-QGLTE--EDAAERLQRYGPNEVA--------HEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTD 98 (903)
T ss_pred CCHHHHHHHhCCCC-CCCCH--HHHHHHHHhcCCCCCC--------CCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 37899999999995 79999 9999999999999999 7788899999999999999999999999999886
Q ss_pred ccc---CCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEEC------CEEEEEEccccccC
Q 043517 115 IKR---NGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRD------GRVRQIAVSEVVVG 185 (956)
Q Consensus 115 ~~~---~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rd------g~~~~I~~~~Lv~G 185 (956)
+.. .+....|.++++++++++++.+++.++|++++++.++| +...+.+++|+|| |++++|+++|||||
T Consensus 99 ~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L---~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~G 175 (903)
T PRK15122 99 YWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEAL---KAMVRTTATVLRRGHAGAEPVRREIPMRELVPG 175 (903)
T ss_pred HHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhccCCceEEEECCccCCCCeEEEEEHHHCCCC
Confidence 421 12223589999999999999999999999999999999 4667789999999 48999999999999
Q ss_pred cEEEeCCCCcccccEEEEeeCCceecccC--------CC-------------------------CCeEeeccEEeeeeEE
Q 043517 186 DVVCLQTGDQVPADGLFVHGKNLKLDDGD--------DK-------------------------LPCIFTGAKVVGGECS 232 (956)
Q Consensus 186 DiV~l~~G~~vPaD~~ll~g~~l~vdes~--------~~-------------------------~~~l~~Gt~v~~g~~~ 232 (956)
|+|.|++||+|||||++++|+++.||||+ ++ +|++|+||.|.+|+++
T Consensus 176 DiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~ 255 (903)
T PRK15122 176 DIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTAT 255 (903)
T ss_pred CEEEECCCCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEE
Confidence 99999999999999999999988999999 11 2689999999999999
Q ss_pred EEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 043517 233 MLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGG 312 (956)
Q Consensus 233 ~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (956)
++|++||.+|++||+.+++.+ + ..++|+|+.++++.+.+..+++.++.+++++. ++.. .
T Consensus 256 ~~V~atG~~T~~gkI~~~v~~-~------~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~---~~~~------~----- 314 (903)
T PRK15122 256 AVVVATGSRTYFGSLAKSIVG-T------RAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN---GFTK------G----- 314 (903)
T ss_pred EEEEEeccccHhhHHHHHhcC-C------CCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh---hhcc------C-----
Confidence 999999999999999999877 4 56789999999999988887776665555442 1111 1
Q ss_pred cccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeE
Q 043517 313 VRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTA 392 (956)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~ 392 (956)
++. ..+.+++++++++|||+ ||++++++++.++++|+|+|+++|+++++|+||++|+
T Consensus 315 ------~~~----------------~~l~~aisl~V~~~Pe~-Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~v 371 (903)
T PRK15122 315 ------DWL----------------EALLFALAVAVGLTPEM-LPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDV 371 (903)
T ss_pred ------CHH----------------HHHHHHHHHHHHHccch-HHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcE
Confidence 223 77889999999999999 9999999999999999999999999999999999999
Q ss_pred EeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHh-cCCCCCCCCcHHHHHHHHHhhcCCChhh-hcccc
Q 043517 393 ICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIAT-TSYDEAAVDDDDALLLWAKEFLDVDGDK-MKQNC 470 (956)
Q Consensus 393 i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~p~e~Al~~~~~~~~~~~~~~-~~~~~ 470 (956)
||||||||||+|+|+|.+++..+.. .+ .+++..++.. ++.....||+|.|+++++. +.+.+... .....
T Consensus 372 Ic~DKTGTLT~~~m~V~~~~~~~~~------~~--~~~l~~a~l~s~~~~~~~~p~e~All~~a~-~~~~~~~~~~~~~~ 442 (903)
T PRK15122 372 LCTDKTGTLTQDRIILEHHLDVSGR------KD--ERVLQLAWLNSFHQSGMKNLMDQAVVAFAE-GNPEIVKPAGYRKV 442 (903)
T ss_pred EEecCCcccccCeEEEEEEEcCCCC------Ch--HHHHHHHHHhCCCCCCCCChHHHHHHHHHH-HcCchhhhhcCceE
Confidence 9999999999999999998754321 11 1233333321 1222345799999999998 55543111 01122
Q ss_pred cccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccce
Q 043517 471 TVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLR 550 (956)
Q Consensus 471 ~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~r 550 (956)
.++||++.+|+|+++++..+ ++ +++++|||||.++++|++... +|...+++++.++++.+..++++. +|+|
T Consensus 443 ~~~pF~s~~k~ms~v~~~~~-----~~-~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~--~G~r 513 (903)
T PRK15122 443 DELPFDFVRRRLSVVVEDAQ-----GQ-HLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNA--DGFR 513 (903)
T ss_pred EEeeeCCCcCEEEEEEEcCC-----Cc-EEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHh--CCCE
Confidence 28899999999999998644 44 789999999999999998764 677788999999999999999999 9999
Q ss_pred eeeeEEeeccccchH-HHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCccc
Q 043517 551 CISFACKRVEQQNEE-EIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILK 629 (956)
Q Consensus 551 vl~~A~k~~~~~~~~-~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~ 629 (956)
|+++|||+++.++.. ..++..|+|++|+|+++++||+|||++++|++|+ ++||+++|+||||+.||.++|+++|| .
T Consensus 514 vlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~-~aGI~v~miTGD~~~tA~aIA~~lGI--~ 590 (903)
T PRK15122 514 VLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALR-ENGVAVKVLTGDNPIVTAKICREVGL--E 590 (903)
T ss_pred EEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHH-HCCCeEEEECCCCHHHHHHHHHHcCC--C
Confidence 999999988654321 1233467899999999999999999999999999 99999999999999999999999999 4
Q ss_pred CCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 630 PGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 630 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
. ..+++|.+++.++++++.+.++++.||||++|+||.++|+.||++|++|+|+|||+||+|||++|||||
T Consensus 591 ~----------~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGI 660 (903)
T PRK15122 591 P----------GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGI 660 (903)
T ss_pred C----------CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEE
Confidence 3 358999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHh
Q 043517 710 SIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNL 789 (956)
Q Consensus 710 amg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~ 789 (956)
||| +|+|+||++||+|+++|+|+.|++++++||++|+|+++++.|.++.|+..++..+++.++..+.|++|.|+||+|+
T Consensus 661 Amg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nl 739 (903)
T PRK15122 661 SVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNL 739 (903)
T ss_pred EeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999888877777776668999999999999
Q ss_pred hhhHHhHHhhccCcc--ccccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccccchhHHH
Q 043517 790 IMDVLGALALAAPVS--LRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVF 867 (956)
Q Consensus 790 ~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f 867 (956)
++|. |++++++||+ ++| + ||++++++++++.++...+..+++... .++++++... .+........+|..|
T Consensus 740 i~D~-~~lal~~d~~~~~~m-~----~P~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~t~~f 811 (903)
T PRK15122 740 MYDI-SQLSLPWDKMDKEFL-R----KPRKWDAKNIGRFMLWIGPTSSIFDIT-TFALMWFVFA-ANSVEMQALFQSGWF 811 (903)
T ss_pred HHHH-HHHhhcCCCCCHhhc-C----CCCCCChhhhHHHHHHHHHHHHHHHHH-HHHHHHHHhc-cCcHhhhhhhHHHHH
Confidence 9995 8999999999 899 8 999999999998776533322222222 2222111111 010000113457789
Q ss_pred HHHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHH--HHH--HHhhccccCCChhhHHHHHHHHHHH
Q 043517 868 NSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAV--IEM--VTVVTHGTRMDLKDWCVCIGIAVMT 943 (956)
Q Consensus 868 ~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~--~~~--~~~~f~~~~l~~~~~~~~~~~~~~~ 943 (956)
..++++|+++++++|+.. . ++|+|++.+..+.+++++++++ +++ ++.+|++.|+++.+|++++++++..
T Consensus 812 ~~l~~~q~~~~~~~R~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~ 884 (903)
T PRK15122 812 IEGLLSQTLVVHMLRTQK-I------PFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGY 884 (903)
T ss_pred HHHHHHHHHHHHhhCcCC-C------CcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999842 1 3344665555555555555443 344 7889999999999999999999999
Q ss_pred HHHHHHHhh
Q 043517 944 LPTGLVAKC 952 (956)
Q Consensus 944 ~~~~~i~k~ 952 (956)
+++.++.|.
T Consensus 885 ~~~~e~~k~ 893 (903)
T PRK15122 885 CLVAQGMKR 893 (903)
T ss_pred HHHHHHHHH
Confidence 999888873
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-122 Score=1137.30 Aligned_cols=797 Identities=19% Similarity=0.247 Sum_probs=667.6
Q ss_pred CHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhcc
Q 043517 36 RIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGI 115 (956)
Q Consensus 36 ~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~~ 115 (956)
+.+++++.|+++. +|||+ +|+++|+++||+|+++ .++++++|+.+++||++|++++++++++++++.+.
T Consensus 53 ~~~~v~~~l~~~~-~GLs~--~ea~~r~~~~G~N~l~--------~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNE--AEVESAREQHGENELP--------AQKPLPWWVHLWVCYRNPFNILLTILGAISYATED 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCH--HHHHHHHHhcCCCCCC--------CCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcc
Confidence 6899999999997 59999 9999999999999999 77788999999999999999999999999999876
Q ss_pred ccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEEC------CEEEEEEccccccCcEEE
Q 043517 116 KRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRD------GRVRQIAVSEVVVGDVVC 189 (956)
Q Consensus 116 ~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rd------g~~~~I~~~~Lv~GDiV~ 189 (956)
|.++++++++++++.+++.++++++++++++| +...+.+++|+|| |++++|+++||||||+|.
T Consensus 122 --------~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L---~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~ 190 (902)
T PRK10517 122 --------LFAAGVIALMVAISTLLNFIQEARSTKAADAL---KAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIK 190 (902)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEE
Confidence 89999999999999999999999999999999 4667789999999 789999999999999999
Q ss_pred eCCCCcccccEEEEeeCCceecccC-----------------------CCCCeEeeccEEeeeeEEEEEEEecCcChHHH
Q 043517 190 LQTGDQVPADGLFVHGKNLKLDDGD-----------------------DKLPCIFTGAKVVGGECSMLVTSVGENTETSM 246 (956)
Q Consensus 190 l~~G~~vPaD~~ll~g~~l~vdes~-----------------------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~ 246 (956)
|++||+|||||+|++|+++.||||+ +++|++|+||.|.+|++.++|++||.+|++||
T Consensus 191 l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~Gk 270 (902)
T PRK10517 191 LAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQ 270 (902)
T ss_pred ECCCCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHH
Confidence 9999999999999999989999999 12358999999999999999999999999999
Q ss_pred HHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhH
Q 043517 247 LMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVT 326 (956)
Q Consensus 247 i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (956)
+.+++.+.+ .+++|+|+.++++++++..++++++.++++++. +.. . ++.
T Consensus 271 I~~~v~~~~------~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~---~~~------~-----------~~~----- 319 (902)
T PRK10517 271 LAGRVSEQD------SEPNAFQQGISRVSWLLIRFMLVMAPVVLLING---YTK------G-----------DWW----- 319 (902)
T ss_pred HHHHhhccC------CCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH---Hhc------C-----------CHH-----
Confidence 999998877 789999999999999999888888777666532 221 1 223
Q ss_pred HHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCce
Q 043517 327 KFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHA 406 (956)
Q Consensus 327 ~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~ 406 (956)
..+..++++++++|||+ ||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|
T Consensus 320 -----------~~l~~alsv~V~~~Pe~-LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m 387 (902)
T PRK10517 320 -----------EAALFALSVAVGLTPEM-LPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKI 387 (902)
T ss_pred -----------HHHHHHHHHHHHHcccH-HHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceE
Confidence 77889999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCC--CCCCCcHHHHHHHHHhhcCCChhhhccccc---ccccCCCCCe
Q 043517 407 NMAELWIATDNSFIKSTSADVLDALREAIATTSYD--EAAVDDDDALLLWAKEFLDVDGDKMKQNCT---VEAFNISKNR 481 (956)
Q Consensus 407 ~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~---~~~F~s~~k~ 481 (956)
+|.+++..... + ..+++..++ +|+.. ...||+|.|+++++. ..+. ....+.++ ++||++++|+
T Consensus 388 ~V~~~~~~~~~------~--~~~ll~~a~-l~~~~~~~~~~p~d~All~~a~-~~~~--~~~~~~~~~~~~~pFds~~k~ 455 (902)
T PRK10517 388 VLENHTDISGK------T--SERVLHSAW-LNSHYQTGLKNLLDTAVLEGVD-EESA--RSLASRWQKIDEIPFDFERRR 455 (902)
T ss_pred EEEEEecCCCC------C--HHHHHHHHH-hcCCcCCCCCCHHHHHHHHHHH-hcch--hhhhhcCceEEEeeeCCCcce
Confidence 99987532111 1 123343333 33332 245799999999987 4321 11122222 7899999999
Q ss_pred EEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccc
Q 043517 482 AGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQ 561 (956)
Q Consensus 482 ~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~ 561 (956)
|+++++..+ +. +.+++||+||.++++|+++.. +|...+++++.++++.+..++++. +|+||+++|||+++.
T Consensus 456 msvvv~~~~-----~~-~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~--~G~rvlavA~k~~~~ 526 (902)
T PRK10517 456 MSVVVAENT-----EH-HQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNR--QGLRVVAVATKYLPA 526 (902)
T ss_pred EEEEEEECC-----Ce-EEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHh--cCCEEEEEEEecCCc
Confidence 999987654 34 679999999999999998765 566789999999999999999999 999999999998765
Q ss_pred cchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcc
Q 043517 562 QNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDA 641 (956)
Q Consensus 562 ~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~ 641 (956)
.+... ....|+|++|+|+++|+||+||+++++|++|+ ++||+++|+||||+.||.++|+++|| +. .
T Consensus 527 ~~~~~-~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~-~aGI~v~miTGD~~~tA~~IA~~lGI--~~----------~ 592 (902)
T PRK10517 527 REGDY-QRADESDLILEGYIAFLDPPKETTAPALKALK-ASGVTVKILTGDSELVAAKVCHEVGL--DA----------G 592 (902)
T ss_pred ccccc-ccccccCceeeehHhhhCcchhhHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHcCC--Cc----------c
Confidence 43221 12247899999999999999999999999999 99999999999999999999999999 42 3
Q ss_pred eeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHh
Q 043517 642 AVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARD 721 (956)
Q Consensus 642 ~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~ 721 (956)
.+++|.+++.++++++.+.++++.||||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||+
T Consensus 593 ~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIARE 671 (902)
T ss_pred CceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred cCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhcc
Q 043517 722 CSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA 801 (956)
Q Consensus 722 ~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~ 801 (956)
+||+|+++|+|..|++++++||++|+|+++++.|.++.|+..++..+++.++..+.|++|.|+||+|+++| +|++++++
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~ 750 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPF 750 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcC
Confidence 99999999999999999999999999999999999999999988888877776557999999999999999 68999999
Q ss_pred Ccc--ccccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccc--cccchhHHHHHHHHHHHHH
Q 043517 802 PVS--LRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQAN--KTDLKAIVFNSFVLCQVFV 877 (956)
Q Consensus 802 ~~~--~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~t~~f~~l~~~~~~~ 877 (956)
||+ ++|++ ||+. +... +.+.++..+++.+++.+..++.....++.... ....++..|..++++|+++
T Consensus 751 d~~~~~~m~~----p~r~-~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~ 821 (902)
T PRK10517 751 DNVDDEQIQK----PQRW-NPAD----LGRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLI 821 (902)
T ss_pred CCCChhhhcC----CCCC-CHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHH
Confidence 999 89998 7762 2222 33333444444433333222221111121000 0123445599999999999
Q ss_pred HHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHH--HH--HHHhhccccCCC--hhhHHHHHHHHHHHHHHHHHHh
Q 043517 878 LINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAV--IE--MVTVVTHGTRMD--LKDWCVCIGIAVMTLPTGLVAK 951 (956)
Q Consensus 878 ~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~--~~--~~~~~f~~~~l~--~~~~~~~~~~~~~~~~~~~i~k 951 (956)
++++|+.. .++|.|++.+.+++.+++++++. ++ .++.+|++.|++ +..|++++++++. ++.++.|
T Consensus 822 ~~~~R~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K 892 (902)
T PRK10517 822 VHMIRTRR-------IPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVK 892 (902)
T ss_pred HHhhccCC-------CCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHH
Confidence 99999832 14456777777766666665543 34 478899999999 6777777666655 5567766
Q ss_pred h
Q 043517 952 C 952 (956)
Q Consensus 952 ~ 952 (956)
.
T Consensus 893 ~ 893 (902)
T PRK10517 893 G 893 (902)
T ss_pred H
Confidence 4
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-121 Score=1128.31 Aligned_cols=797 Identities=18% Similarity=0.251 Sum_probs=669.6
Q ss_pred CHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhcc
Q 043517 36 RIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGI 115 (956)
Q Consensus 36 ~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~~ 115 (956)
+++++++.|+++. +|||+ +|+++|+++||+|+++ .++++++|+.+++||++|++++++++++++++.+.
T Consensus 19 ~~~~~~~~l~~~~-~GLs~--~ev~~r~~~~G~N~l~--------~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~~ 87 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTN--VEVTERLAEFGPNQTV--------EEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTDD 87 (867)
T ss_pred CHHHHHHHhCCCC-CCCCH--HHHHHHHHhcCCCcCC--------CCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHhh
Confidence 7899999999986 69999 9999999999999999 66778899999999999999999999999999876
Q ss_pred ccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEE------CCEEEEEEccccccCcEEE
Q 043517 116 KRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMR------DGRVRQIAVSEVVVGDVVC 189 (956)
Q Consensus 116 ~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~R------dg~~~~I~~~~Lv~GDiV~ 189 (956)
|.++++++++++++.+++.++|++++++.++| +...+.+++|+| ||++++|+++||||||+|.
T Consensus 88 --------~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L---~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~ 156 (867)
T TIGR01524 88 --------LEATVIIALMVLASGLLGFIQESRAERAAYAL---KNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIE 156 (867)
T ss_pred --------HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH---hhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEE
Confidence 89999999999999999999999999999999 456678999999 9999999999999999999
Q ss_pred eCCCCcccccEEEEeeCCceecccC--------C---------------CCCeEeeccEEeeeeEEEEEEEecCcChHHH
Q 043517 190 LQTGDQVPADGLFVHGKNLKLDDGD--------D---------------KLPCIFTGAKVVGGECSMLVTSVGENTETSM 246 (956)
Q Consensus 190 l~~G~~vPaD~~ll~g~~l~vdes~--------~---------------~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~ 246 (956)
|++||+|||||++++|+++.||||+ + ++|++|+||.|.+|+++++|++||.+|++||
T Consensus 157 l~~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gk 236 (867)
T TIGR01524 157 LAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGS 236 (867)
T ss_pred ECCCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHH
Confidence 9999999999999999989999999 1 1368999999999999999999999999999
Q ss_pred HHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhH
Q 043517 247 LMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVT 326 (956)
Q Consensus 247 i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (956)
+.+.+.+ + .+++|+|+.++++++++..+++++++++++++. +.. . ++.
T Consensus 237 i~~~v~~-~------~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~---~~~------~-----------~~~----- 284 (867)
T TIGR01524 237 LAIAATE-R------RGQTAFDKGVKSVSKLLIRFMLVMVPVVLMING---LMK------G-----------DWL----- 284 (867)
T ss_pred HHHHhhC-C------CCCCcHHHHHHHHHHHHHHHHHHHHHHheehHH---Hhc------C-----------CHH-----
Confidence 9999987 5 578999999999999999988888877766542 111 1 222
Q ss_pred HHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCce
Q 043517 327 KFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHA 406 (956)
Q Consensus 327 ~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~ 406 (956)
..+.+++++++++|||+ ||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|
T Consensus 285 -----------~~~~~al~l~v~~iP~~-Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m 352 (867)
T TIGR01524 285 -----------EAFLFALAVAVGLTPEM-LPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKI 352 (867)
T ss_pred -----------HHHHHHHHHHHHhCcch-HHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeE
Confidence 77889999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCC--CCCCCcHHHHHHHHHhhcCCChhhhccccc---ccccCCCCCe
Q 043517 407 NMAELWIATDNSFIKSTSADVLDALREAIATTSYD--EAAVDDDDALLLWAKEFLDVDGDKMKQNCT---VEAFNISKNR 481 (956)
Q Consensus 407 ~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~---~~~F~s~~k~ 481 (956)
+|.+++..... . ..+++..+ ++|+.. ...||+|.|+++++. +... ...+..++ .+||+|++|+
T Consensus 353 ~v~~~~~~~~~------~--~~~~l~~a-~l~~~~~~~~~~p~~~Al~~~~~-~~~~--~~~~~~~~~~~~~pF~s~~k~ 420 (867)
T TIGR01524 353 ELEKHIDSSGE------T--SERVLKMA-WLNSYFQTGWKNVLDHAVLAKLD-ESAA--RQTASRWKKVDEIPFDFDRRR 420 (867)
T ss_pred EEEEEecCCCC------C--HHHHHHHH-HHhCCCCCCCCChHHHHHHHHHH-hhch--hhHhhcCceEEEeccCCCcCE
Confidence 99998643221 1 12333333 334332 234799999999987 4321 11122222 7899999999
Q ss_pred EEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccc
Q 043517 482 AGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQ 561 (956)
Q Consensus 482 ~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~ 561 (956)
|+++++..+ +. +++++||+||.++++|+++.. +|...+++++.++++++.+++++. +|+||+++|||+++.
T Consensus 421 ms~~v~~~~-----~~-~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~--~G~rvlavA~~~~~~ 491 (867)
T TIGR01524 421 LSVVVENRA-----EV-TRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNR--QGIRVIAVATKTLKV 491 (867)
T ss_pred EEEEEEcCC-----ce-EEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHh--cCCEEEEEEEeccCc
Confidence 999987644 33 679999999999999998755 677788999999999999999999 999999999998865
Q ss_pred cchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcc
Q 043517 562 QNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDA 641 (956)
Q Consensus 562 ~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~ 641 (956)
++.+ ..+..|++++|+|+++++||+|+|++++|++|+ ++||+++|+||||+.||.++|+++|| .. .
T Consensus 492 ~~~~-~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~-~aGI~vvmiTGD~~~tA~aIA~~lGI--~~----------~ 557 (867)
T TIGR01524 492 GEAD-FTKTDEEQLIIEGFLGFLDPPKESTKEAIAALF-KNGINVKVLTGDNEIVTARICQEVGI--DA----------N 557 (867)
T ss_pred cccc-ccccccCCcEEEEEEEeeCCCchhHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHcCC--CC----------C
Confidence 4321 122247899999999999999999999999999 99999999999999999999999999 42 3
Q ss_pred eeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHh
Q 043517 642 AVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARD 721 (956)
Q Consensus 642 ~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~ 721 (956)
.+++|.+++.++++++.+.+.++++|||++|+||.++|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||+
T Consensus 558 ~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKE 636 (867)
T ss_pred CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred cCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhcc
Q 043517 722 CSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAA 801 (956)
Q Consensus 722 ~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~ 801 (956)
+||+|+++|+|+.|++++++||++++|+++++.|.++.|+..++..+++.++..+.|++|.|++|+|+++| +|++++++
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~ 715 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPW 715 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcC
Confidence 99999999999999999999999999999999999999999988888777776668999999999999999 79999999
Q ss_pred Ccc--ccccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhccc--cccccchhHHHHHHHHHHHHH
Q 043517 802 PVS--LRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQ--ANKTDLKAIVFNSFVLCQVFV 877 (956)
Q Consensus 802 ~~~--~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~t~~f~~l~~~~~~~ 877 (956)
||+ ++|++ ||+ ++++.+.+. +...+++.+++.+..++.....+... ......+|..|..++++|+++
T Consensus 716 ~~~~~~~m~~----p~~-~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~ 786 (867)
T TIGR01524 716 DKMDREFLKK----PHQ-WEQKGMGRF----MLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLV 786 (867)
T ss_pred CCCChHhhCC----CCC-CChhhHHHH----HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHH
Confidence 999 89976 555 555443333 33334443333222222111111100 011234678899999999999
Q ss_pred HHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHHH--H--HHhhccccCCC--hhhHHHHHHHHHHHHHHHHHHh
Q 043517 878 LINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIE--M--VTVVTHGTRMD--LKDWCVCIGIAVMTLPTGLVAK 951 (956)
Q Consensus 878 ~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~--~--~~~~f~~~~l~--~~~~~~~~~~~~~~~~~~~i~k 951 (956)
++++|+.+ .++|.|++++.++++++++++++++ + ++.+|++.|++ +..|++++.+++. ++.++.|
T Consensus 787 ~~~~R~~~-------~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k 857 (867)
T TIGR01524 787 VHMIRTEK-------IPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVK 857 (867)
T ss_pred HHhhCcCC-------CCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHH
Confidence 99999732 1445688888888888877766554 3 37899999884 5567776666654 5677777
Q ss_pred hc
Q 043517 952 CI 953 (956)
Q Consensus 952 ~~ 953 (956)
++
T Consensus 858 ~~ 859 (867)
T TIGR01524 858 TF 859 (867)
T ss_pred HH
Confidence 53
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-119 Score=1117.41 Aligned_cols=805 Identities=23% Similarity=0.362 Sum_probs=690.5
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhccccCCC--cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEE
Q 043517 91 ISDSIKDSTVILLLCCATLSLLLGIKRNGF--EQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKV 168 (956)
Q Consensus 91 l~~~~~~~~~~~ll~~~~ls~~~~~~~~~~--~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V 168 (956)
+++||++|++++|+++++++++++....+. ...|+++++|+++++++..++.++++++++++++| +...+.+++|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L---~~~~~~~~~V 77 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEAL---KEYESEHAKV 77 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccCCCceEE
Confidence 478999999999999999999987643222 24699999999999999999999999999999999 4567889999
Q ss_pred EECCEEEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC--------C---------------CCCeEeeccE
Q 043517 169 MRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD--------D---------------KLPCIFTGAK 225 (956)
Q Consensus 169 ~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~--------~---------------~~~~l~~Gt~ 225 (956)
+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+ . ++|++|+||.
T Consensus 78 iRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~ 157 (917)
T TIGR01116 78 LRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTL 157 (917)
T ss_pred EECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCE
Confidence 9999999999999999999999999999999999999888999999 1 1389999999
Q ss_pred EeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 043517 226 VVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDH 305 (956)
Q Consensus 226 v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~ 305 (956)
|.+|++.++|++||.+|++||+.+++.+.+ .+++|+|+++++++.++..+.++++++++++++..+. .. ..
T Consensus 158 v~~G~~~~~V~~tG~~T~~gki~~~~~~~~------~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~-~~--~~ 228 (917)
T TIGR01116 158 VVAGKARGVVVRTGMSTEIGKIRDEMRAAE------QEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFN-DP--AL 228 (917)
T ss_pred EecceEEEEEEEeCCCCHHHHHHHHhhccC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cc--cc
Confidence 999999999999999999999999998877 7899999999999999998888887777666433221 10 00
Q ss_pred CCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccc
Q 043517 306 DPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCS 385 (956)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e 385 (956)
...|. ..++ ..+..++++++++||++ ||++++++++.++++|+++|+++|+++++|
T Consensus 229 ~~~~~-------~~~~----------------~~~~~~i~l~v~~iP~~-Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE 284 (917)
T TIGR01116 229 GGGWI-------QGAI----------------YYFKIAVALAVAAIPEG-LPAVITTCLALGTRKMAKKNAIVRKLPSVE 284 (917)
T ss_pred cchhH-------HHHH----------------HHHHHHHhhhhhccccc-cHHHHHHHHHHHHHHHHHCCcEecCcHHHH
Confidence 11221 1223 55667889999999999 999999999999999999999999999999
Q ss_pred cccceeEEeeCccccccCCceEEEEEEecCcc-------------cccCC--C---------CHHHHHHHHHHHHhcCCC
Q 043517 386 SLGLVTAICTGKTSDLSLDHANMAELWIATDN-------------SFIKS--T---------SADVLDALREAIATTSYD 441 (956)
Q Consensus 386 ~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~-------------~~~~~--~---------~~~~~~~l~~~~~~~~~~ 441 (956)
+||++|+||||||||||+|+|+|.+++..+.. |.+.. . .+...+.+..++++||++
T Consensus 285 ~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~ 364 (917)
T TIGR01116 285 TLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDS 364 (917)
T ss_pred hccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999876421 11100 0 112234556677888874
Q ss_pred C------------CCCCcHHHHHHHHHhhcCCChhhh----------------ccccc---ccccCCCCCeEEEEEecCC
Q 043517 442 E------------AAVDDDDALLLWAKEFLDVDGDKM----------------KQNCT---VEAFNISKNRAGLLLKWNG 490 (956)
Q Consensus 442 ~------------~~~p~e~Al~~~~~~~~~~~~~~~----------------~~~~~---~~~F~s~~k~~svv~~~~~ 490 (956)
. ..+|+|.|+++++. +.|.+.... ++.++ .+||+|+||||+++++..+
T Consensus 365 ~~~~~~~~~~~~~~gdp~E~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~ 443 (917)
T TIGR01116 365 SLDFNERKGVYEKVGEATEAALKVLVE-KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPST 443 (917)
T ss_pred eeeccccCCceeeccChhHHHHHHHHH-HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCC
Confidence 2 24799999999998 888764322 22232 8899999999999998543
Q ss_pred CCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccch------
Q 043517 491 SESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNE------ 564 (956)
Q Consensus 491 ~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~------ 564 (956)
+ +++|+|||||.|+++|+++...+|...|++++.++++++.+++|++ ++|+||+++|||.++.+..
T Consensus 444 ------~-~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~-~~GlRvl~~A~k~~~~~~~~~~~~~ 515 (917)
T TIGR01116 444 ------G-NKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGT-TKALRCLALAFKDIPDPREEDLLSD 515 (917)
T ss_pred ------c-EEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHh-hcCCeEEEEEEEECCcccccccccc
Confidence 3 7899999999999999988876788899999999999999999986 3799999999999865321
Q ss_pred HHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceee
Q 043517 565 EEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVI 644 (956)
Q Consensus 565 ~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i 644 (956)
....+.+|+|++|+|+++++||+|++++++|++|+ ++||+++|+|||+..||.++|+++|+ ..++.+ -....+
T Consensus 516 ~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~-~aGI~v~miTGD~~~tA~~ia~~~gi-~~~~~~-----v~~~~~ 588 (917)
T TIGR01116 516 PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCR-TAGIRVIMITGDNKETAEAICRRIGI-FSPDED-----VTFKSF 588 (917)
T ss_pred chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHH-HCCCEEEEecCCCHHHHHHHHHHcCC-CCCCcc-----ccceee
Confidence 11235679999999999999999999999999999 99999999999999999999999999 443210 013578
Q ss_pred echhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCC
Q 043517 645 EASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD 724 (956)
Q Consensus 645 ~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad 724 (956)
+|.+++.+++++......+..||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||| +|++.+|++||
T Consensus 589 ~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD 667 (917)
T TIGR01116 589 TGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASD 667 (917)
T ss_pred eHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred eeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCcc
Q 043517 725 IVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS 804 (956)
Q Consensus 725 ~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~ 804 (956)
+++.+|+|+.|.++++|||++|+|+++++.|.+++|+..+++.+++.++..+.||+++|++|+|++++.+|++++++++|
T Consensus 668 ~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~ 747 (917)
T TIGR01116 668 MVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPP 747 (917)
T ss_pred eEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999888887788999999999999999999999999999
Q ss_pred --ccccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc-----------c----------ccccc
Q 043517 805 --LRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQV-----------Q----------ANKTD 861 (956)
Q Consensus 805 --~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----------~----------~~~~~ 861 (956)
++|++ ||++++++++++.++..++..+++++++.++.+++.....+. . .....
T Consensus 748 ~~~~m~~----pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (917)
T TIGR01116 748 DKDIMWK----PPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQP 823 (917)
T ss_pred chhHhcC----CCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccc
Confidence 99999 999999999999999999999999887755444322111010 0 01346
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHH--HHHHHhhccccCCChhhHHHHHHH
Q 043517 862 LKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAV--IEMVTVVTHGTRMDLKDWCVCIGI 939 (956)
Q Consensus 862 ~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~~~~~~~~ 939 (956)
++|++|.+++++|++|.+++|+. +.++|+ .++++|+++++++++++++++++ +++++.+|++.|+++.+|++++++
T Consensus 824 ~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~-~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~ 901 (917)
T TIGR01116 824 ARTISLSVLVVIEMFNALNALSE-DQSLLR-MPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKL 901 (917)
T ss_pred hHHHHHHHHHHHHHHHHHHHcCC-cccccc-cCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHH
Confidence 78999999999999999999994 456676 57789999999999999999887 556899999999999999999999
Q ss_pred HHHHHHHHHHHhhcc
Q 043517 940 AVMTLPTGLVAKCIP 954 (956)
Q Consensus 940 ~~~~~~~~~i~k~~~ 954 (956)
+++.++++++.|++.
T Consensus 902 ~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 902 SLPVILVDEVLKFFS 916 (917)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999864
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-113 Score=1080.23 Aligned_cols=778 Identities=16% Similarity=0.191 Sum_probs=636.6
Q ss_pred CCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCCcccchhhH
Q 043517 49 DIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGA 128 (956)
Q Consensus 49 ~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~~~~~~~~~~~~~~~ 128 (956)
..|||+ +|+++|+++||+|+++ .+.+++|+++++|+.+|+++++++++++|++.++ |++++
T Consensus 137 ~~GLs~--~e~~~r~~~yG~N~i~---------~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~~--------~~~~~ 197 (1054)
T TIGR01657 137 SNGLTT--GDIAQRKAKYGKNEIE---------IPVPSFLELLKEEVLHPFYVFQVFSVILWLLDEY--------YYYSL 197 (1054)
T ss_pred ccCCCH--HHHHHHHHhcCCCeee---------cCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhhh--------HHHHH
Confidence 359999 9999999999999999 4678999999999999999999999999988765 88999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeC--CCCcccccEEEEeeC
Q 043517 129 MVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQ--TGDQVPADGLFVHGK 206 (956)
Q Consensus 129 ~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~--~G~~vPaD~~ll~g~ 206 (956)
+++++++++..++.++++++.++++++ ...+..++|+|||++++|+++||||||+|.|+ +|++|||||+|++|+
T Consensus 198 ~i~~i~~~~~~~~~~~~~k~~~~L~~~----~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~ 273 (1054)
T TIGR01657 198 CIVFMSSTSISLSVYQIRKQMQRLRDM----VHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS 273 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh----hcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc
Confidence 999988888889888888887777776 22567999999999999999999999999999 999999999999997
Q ss_pred CceecccC--------------C--------------CCCeEeeccEEee-------eeEEEEEEEecCcChHHHHHHhh
Q 043517 207 NLKLDDGD--------------D--------------KLPCIFTGAKVVG-------GECSMLVTSVGENTETSMLMKLL 251 (956)
Q Consensus 207 ~l~vdes~--------------~--------------~~~~l~~Gt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~ 251 (956)
+.||||+ . ++|++|+||.|++ |.+.++|++||.+|..|++.+.+
T Consensus 274 -~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i 352 (1054)
T TIGR01657 274 -CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSI 352 (1054)
T ss_pred -EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHh
Confidence 4999999 1 1357999999996 78999999999999999999999
Q ss_pred cccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhc
Q 043517 252 SKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRR 331 (956)
Q Consensus 252 ~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (956)
..++ ..++++++...++...+..++++.++++++. .+.. +. ++.
T Consensus 353 ~~~~------~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~----~~~~-----~~-----------~~~---------- 396 (1054)
T TIGR01657 353 LYPK------PRVFKFYKDSFKFILFLAVLALIGFIYTIIE----LIKD-----GR-----------PLG---------- 396 (1054)
T ss_pred hCCC------CCCCchHHHHHHHHHHHHHHHHHHHHHHHHH----HHHc-----CC-----------cHH----------
Confidence 8877 7788999988888776655554433332222 1111 11 223
Q ss_pred cCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEE
Q 043517 332 QGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAEL 411 (956)
Q Consensus 332 ~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i 411 (956)
..+.++++++++++|++ ||++++++++.+++||+|+|++||+++++|++|++|++|||||||||+|+|+|.++
T Consensus 397 ------~~~l~~l~iiv~~vP~~-LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v 469 (1054)
T TIGR01657 397 ------KIILRSLDIITIVVPPA-LPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGV 469 (1054)
T ss_pred ------HHHHHHHHHHHhhcCch-HHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeE
Confidence 77899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccccc----CCCCHHHHHHHHHHHHhcCCCC------CCCCcHHHHHHHHHhhcCCChhh-h-------------c
Q 043517 412 WIATDNSFI----KSTSADVLDALREAIATTSYDE------AAVDDDDALLLWAKEFLDVDGDK-M-------------K 467 (956)
Q Consensus 412 ~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~------~~~p~e~Al~~~~~~~~~~~~~~-~-------------~ 467 (956)
+..+..... .+........+..++++||+.. ..||+|.|+++++.+....+... . .
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 549 (1054)
T TIGR01657 470 QGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPP 549 (1054)
T ss_pred ecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCC
Confidence 876532110 0000012234556788898753 35799999999875322210000 0 0
Q ss_pred cccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhh
Q 043517 468 QNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEA 544 (956)
Q Consensus 468 ~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 544 (956)
..++ ++||+|++|||+|+++..++ ++ +++|+|||||.|+++|++. +.++++.+.+++|+.
T Consensus 550 ~~~~il~~~pF~S~~krMsvvv~~~~~----~~-~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~ 612 (1054)
T TIGR01657 550 QELSIIRRFQFSSALQRMSVIVSTNDE----RS-PDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTR 612 (1054)
T ss_pred ceEEEEEEEeecCCCCEEEEEEEEcCC----Ce-EEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHh
Confidence 1222 89999999999999987653 45 7899999999999999742 235678899999999
Q ss_pred ccccceeeeeEEeeccccchH----HHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHH
Q 043517 545 NHHSLRCISFACKRVEQQNEE----EIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLI 620 (956)
Q Consensus 545 ~~~G~rvl~~A~k~~~~~~~~----~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~i 620 (956)
+|+||+|+|||++++.+.+ ..++..|+||+|+|+++|+||+||+++++|++|+ ++||+++|+||||+.||.++
T Consensus 613 --~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~-~agi~v~miTGD~~~TA~~i 689 (1054)
T TIGR01657 613 --EGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELK-RASIRTVMITGDNPLTAVHV 689 (1054)
T ss_pred --cCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHH-HCCCeEEEECCCCHHHHHHH
Confidence 9999999999998743321 2467889999999999999999999999999999 99999999999999999999
Q ss_pred HHhcCCcccCCCCCC--------------------------------------------CCCCcceeeechhhhc---CC
Q 043517 621 AINSGLILKPGAEDH--------------------------------------------SNGYDAAVIEASVFRS---SS 653 (956)
Q Consensus 621 a~~~Gi~~~~~~~~~--------------------------------------------~~~~~~~~i~g~~~~~---~~ 653 (956)
|+++|| ++++.... ..+....+++|++++. +.
T Consensus 690 A~~~gi-i~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~ 768 (1054)
T TIGR01657 690 ARECGI-VNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHS 768 (1054)
T ss_pred HHHcCC-CCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhh
Confidence 999999 65432100 0012247999999875 46
Q ss_pred HHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChh
Q 043517 654 EETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFT 733 (956)
Q Consensus 654 ~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~ 733 (956)
++++.+++.++.||||++|+||.++|+.+|+.|++|+|||||+||+||||+|||||||| ++ | |+.+||+++.+++++
T Consensus 769 ~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~-~~-d-as~AA~f~l~~~~~~ 845 (1054)
T TIGR01657 769 PELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS-EA-E-ASVAAPFTSKLASIS 845 (1054)
T ss_pred HHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeec-cc-c-ceeecccccCCCcHH
Confidence 67899999999999999999999999999999999999999999999999999999998 33 3 458999999999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcc
Q 043517 734 TIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPA 811 (956)
Q Consensus 734 ~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ 811 (956)
+|+++|+|||+++.|+++.++|.+.++++..+..++. +..+.|++++|++|+|++++.+++++|++++| ++|++
T Consensus 846 ~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~-- 921 (1054)
T TIGR01657 846 CVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSIL--YLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKE-- 921 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCC--
Confidence 9999999999999999999999999999876654433 33458999999999999999999999999999 89988
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhh--hhcc--------ccccccchhHHHHHHHHHHHHHHHHH
Q 043517 812 HATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNE--LLQV--------QANKTDLKAIVFNSFVLCQVFVLINA 881 (956)
Q Consensus 812 ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~--------~~~~~~~~t~~f~~l~~~~~~~~~~~ 881 (956)
+| .++++++.++..++.++++++++.++.++.... |+.. .......+|++|....+ |.+..+.+
T Consensus 922 --~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~~~-~~~~~~~~ 995 (1054)
T TIGR01657 922 --RP---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSF-QYLITAIV 995 (1054)
T ss_pred --CC---CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHHHHHHH-HHHHheEE
Confidence 66 469999999999999999998888776654432 3210 01223457899955555 44444555
Q ss_pred hhccccccccccCCCchhHHHHHHHHHHHHHHH----HHHHHHhhccccCCCh
Q 043517 882 REIEALNIFEGKGLHQNPWFLVIVGFIFILDIA----VIEMVTVVTHGTRMDL 930 (956)
Q Consensus 882 ~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~----~~~~~~~~f~~~~l~~ 930 (956)
++ .+++|+ +++++|+++++++++.+++++. +.+.++.+|++.|++.
T Consensus 996 ~~--~g~pf~-~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1045 (1054)
T TIGR01657 996 NS--KGPPFR-EPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ 1045 (1054)
T ss_pred Ec--CCcchh-hhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH
Confidence 54 467888 7999999998888777666553 2356899999999985
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-112 Score=1034.89 Aligned_cols=733 Identities=19% Similarity=0.256 Sum_probs=616.4
Q ss_pred CCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCCcccchhhHHH
Q 043517 51 GISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMV 130 (956)
Q Consensus 51 GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~~~~~~~~~~~~~~~~i 130 (956)
|||+ +|+++|+++||+|+++ .++++.|+.++++|++|++++++++++++++.+. |.+++++
T Consensus 1 GLs~--~ea~~r~~~~G~N~~~---------~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~~--------~~~~~~i 61 (755)
T TIGR01647 1 GLTS--AEAKKRLAKYGPNELP---------EKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN--------WVDFVII 61 (755)
T ss_pred CcCH--HHHHHHHHhcCCCCCC---------CCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhcc--------hhhhhhh
Confidence 8999 9999999999999999 4566788999999999999999999999999986 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCCCcccccEEEEeeCCcee
Q 043517 131 FVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKL 210 (956)
Q Consensus 131 ~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~v 210 (956)
+++++++..++.++++++++++++| +...+.+++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.|
T Consensus 62 ~~~~~i~~~i~~~qe~~a~~~~~~L---~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~V 138 (755)
T TIGR01647 62 LGLLLLNATIGFIEENKAGNAVEAL---KQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQV 138 (755)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHH---HhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEE
Confidence 9999999999999999999999999 4667889999999999999999999999999999999999999999997899
Q ss_pred cccC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHH
Q 043517 211 DDGD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEK 280 (956)
Q Consensus 211 des~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~ 280 (956)
|||+ ..++.+|+||.|.+|+++++|++||.+|.+|++.+++.+.+ .+++|+|+.++++++++.+
T Consensus 139 DeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~------~~~~~lq~~~~~i~~~~~~ 212 (755)
T TIGR01647 139 DQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTE------TGSGHLQKILSKIGLFLIV 212 (755)
T ss_pred EcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccC------CCCCcHHHHHHHHHHHHHH
Confidence 9999 45799999999999999999999999999999999998877 7889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHH
Q 043517 281 IWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGL 360 (956)
Q Consensus 281 ~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~ 360 (956)
++++++++++++++.. .+ . ++. ..+.+++++++++|||+ ||+++
T Consensus 213 ~~~~~~~i~~~~~~~~--~~------~-----------~~~----------------~~~~~~i~vlv~a~P~~-Lp~~~ 256 (755)
T TIGR01647 213 LIGVLVLIELVVLFFG--RG------E-----------SFR----------------EGLQFALVLLVGGIPIA-MPAVL 256 (755)
T ss_pred HHHHHHHHHHHHHHHH--cC------C-----------CHH----------------HHHHHHHHHHHHhCCcc-hHHHH
Confidence 9888888777765321 11 1 223 77889999999999999 99999
Q ss_pred HHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCC
Q 043517 361 FICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSY 440 (956)
Q Consensus 361 ~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 440 (956)
+++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..++.+. + .+++..++. |+.
T Consensus 257 ~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~-----~--~~~l~~a~~-~~~ 328 (755)
T TIGR01647 257 SVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD-----K--DDVLLYAAL-ASR 328 (755)
T ss_pred HHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCC-----H--HHHHHHHHH-hCC
Confidence 99999999999999999999999999999999999999999999999999987643221 1 234444443 333
Q ss_pred CCCCCCcHHHHHHHHHhhcCCChhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhc
Q 043517 441 DEAAVDDDDALLLWAKEFLDVDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHY 517 (956)
Q Consensus 441 ~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~ 517 (956)
....||+|.|+++++. +.+ ..+..++ .+||++.+|+|+++++..++ ++ .++++||+||.++++|++.
T Consensus 329 ~~~~~pi~~Ai~~~~~-~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~----g~-~~~~~kGa~e~il~~c~~~ 398 (755)
T TIGR01647 329 EEDQDAIDTAVLGSAK-DLK----EARDGYKVLEFVPFDPVDKRTEATVEDPET----GK-RFKVTKGAPQVILDLCDNK 398 (755)
T ss_pred CCCCChHHHHHHHHHH-HhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCC----ce-EEEEEeCChHHHHHhcCCc
Confidence 4445799999999887 433 1111222 78999999999999876532 44 6688999999999999732
Q ss_pred cccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHH
Q 043517 518 LDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIED 597 (956)
Q Consensus 518 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~ 597 (956)
++.++++++.+++++. +|+|++++|||+ .|++++|+|+++|+||+|||++++|++
T Consensus 399 -----------~~~~~~~~~~~~~~~~--~G~rvl~vA~~~------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~ 453 (755)
T TIGR01647 399 -----------KEIEEKVEEKVDELAS--RGYRALGVARTD------------EEGRWHFLGLLPLFDPPRHDTKETIER 453 (755)
T ss_pred -----------HHHHHHHHHHHHHHHh--CCCEEEEEEEEc------------CCCCcEEEEEeeccCCChhhHHHHHHH
Confidence 2456778889999999 999999999972 145899999999999999999999999
Q ss_pred HHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHH
Q 043517 598 CRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLL 677 (956)
Q Consensus 598 l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~ 677 (956)
|+ ++||+++|+|||++.||.++|+++|| .++. .......+|.+.+.++++++.+.+.++++|||++|+||.+
T Consensus 454 l~-~aGI~v~miTGD~~~tA~~IA~~lGI--~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~ 525 (755)
T TIGR01647 454 AR-HLGVEVKMVTGDHLAIAKETARRLGL--GTNI-----YTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYE 525 (755)
T ss_pred HH-HCCCeEEEECCCCHHHHHHHHHHcCC--CCCC-----cCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHH
Confidence 99 99999999999999999999999999 4310 0122344556667888999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHH
Q 043517 678 MVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHL 757 (956)
Q Consensus 678 iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l 757 (956)
+|+.+|++|++|+|+|||+||+|||++|||||||| +|+|+||++||+++++|+|+.|++++++||++++|+++++.|.+
T Consensus 526 iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~ 604 (755)
T TIGR01647 526 IVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRI 604 (755)
T ss_pred HHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCccccccCcccccCCCCCCCCcchHHHHHHHHHHHH
Q 043517 758 TVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQLPAHATAAASASPLANKTVWRNIILQVLY 837 (956)
Q Consensus 758 ~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~ 837 (956)
+.|+..+++.+++.++.+ .|++|+|++|+|+++|. +++++++|+++ +|++|++..+ ..++..+...+++
T Consensus 605 ~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~~~~--------~~~~p~~~~~-~~~~~~~~~~g~~ 673 (755)
T TIGR01647 605 AETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYDNVK--------PSKLPQRWNL-REVFTMSTVLGIY 673 (755)
T ss_pred cccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCCCCC--------CCCCCCccch-HHHHHHHHHHHHH
Confidence 999998877776665443 45999999999999996 69999999972 2333333333 4666666667777
Q ss_pred HHHHHHHHHHhhhh---hh---ccccccccchhHHHHHHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHH
Q 043517 838 QVFVLSATQLKGNE---LL---QVQANKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFIL 911 (956)
Q Consensus 838 ~~~~~~~~~~~~~~---~~---~~~~~~~~~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~ 911 (956)
.++..+.++++... +. +........+|+.|..++++|.++++++|+. ..+|+ . +.|++++.+.++..++
T Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~--~~~~~--~-~p~~~l~~~~~~~~~~ 748 (755)
T TIGR01647 674 LVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRTH--GFFWS--E-RPGKLLFIAFVIAQII 748 (755)
T ss_pred HHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHheeccC--CCCcc--c-CCcHHHHHHHHHHHHH
Confidence 77665555543321 11 1101234689999999999999999999983 34454 2 3677776666666555
Q ss_pred HHHH
Q 043517 912 DIAV 915 (956)
Q Consensus 912 ~~~~ 915 (956)
..++
T Consensus 749 ~~~~ 752 (755)
T TIGR01647 749 ATFI 752 (755)
T ss_pred HHHH
Confidence 5443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-115 Score=982.63 Aligned_cols=864 Identities=22% Similarity=0.294 Sum_probs=731.0
Q ss_pred HHHHHHhhccCChhHHhhhCCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHH
Q 043517 16 QETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSI 95 (956)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~ 95 (956)
+++|+++-++-.++ +|..+.+|+++++++|..+|||. +++.+++.+.|+|.++ +++..+-|..+.+|+
T Consensus 25 ~~~l~~~k~e~~~~--~H~~~~~eL~~r~~t~~~~Glt~--~~A~~~L~rdG~NaL~--------Ppk~t~~wikf~kq~ 92 (1019)
T KOG0203|consen 25 KKELDDLKKEVSMD--DHKLSVDELCERYGTSVSQGLTS--QEAAEKLARDGPNALT--------PPKTTPEWIKFLRQL 92 (1019)
T ss_pred hhhHHHHhhheeec--cccCCHHHHHHHhcCChhhcccH--HHHHhhhccCCCCCCC--------CCCCChHHHHHHHHH
Confidence 34455554444444 56669999999999999999999 9999999999999999 899999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhccc---cC-C-CcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEE
Q 043517 96 KDSTVILLLCCATLSLLLGIK---RN-G-FEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMR 170 (956)
Q Consensus 96 ~~~~~~~ll~~~~ls~~~~~~---~~-~-~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~R 170 (956)
++.+.++++++++++++.+.. .. . ...+.+-++++..+++...+...+++.+..+-.+.. +...|..++|+|
T Consensus 93 f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF---~~l~P~~~~ViR 169 (1019)
T KOG0203|consen 93 FGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSF---KNLVPQQALVIR 169 (1019)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHH---hccchhhheeee
Confidence 999999999999999876541 11 1 122333444333333333455555665555555555 577899999999
Q ss_pred CCEEEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC--------------------CCCCeEeeccEEeeee
Q 043517 171 DGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD--------------------DKLPCIFTGAKVVGGE 230 (956)
Q Consensus 171 dg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~--------------------~~~~~l~~Gt~v~~g~ 230 (956)
||+...+.++||||||+|.++-||+||||.|++++..+.+|+|+ +..|+.|.+|.+++|.
T Consensus 170 dg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~ 249 (1019)
T KOG0203|consen 170 DGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGT 249 (1019)
T ss_pred cceeEEechhhcccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecce
Confidence 99999999999999999999999999999999999999999999 4578999999999999
Q ss_pred EEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 043517 231 CSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPK 310 (956)
Q Consensus 231 ~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~ 310 (956)
++++|++||.+|.+|+++.+...-+ ..++|+++.++++..++...++.+++..|++.+.. + .
T Consensus 250 ~~givi~tGd~Tv~G~ia~l~~~~~------~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~---g------y--- 311 (1019)
T KOG0203|consen 250 GRGIVIATGDRTVMGRIASLASGLE------DGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL---G------Y--- 311 (1019)
T ss_pred EEEEEEecCCceEEeehhhhhccCC------CCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh---c------c---
Confidence 9999999999999999999888767 78999999999999999999999888888775332 2 1
Q ss_pred CCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccce
Q 043517 311 GGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLV 390 (956)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v 390 (956)
+++ .++.+.++++++.+|+| ||..++.+++...+||+++++++|++.++|+||+.
T Consensus 312 --------~~l----------------~avv~~i~iivAnvPeG-L~~tvTv~LtltakrMa~Knc~vknLeavetlGst 366 (1019)
T KOG0203|consen 312 --------EWL----------------RAVVFLIGIIVANVPEG-LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGST 366 (1019)
T ss_pred --------hhH----------------HHhhhhheeEEecCcCC-ccceehhhHHHHHHHHhhceeEEeeeeheeecccc
Confidence 233 66777899999999999 99999999999999999999999999999999999
Q ss_pred eEEeeCccccccCCceEEEEEEecCcccccCC----------CCHHHHHHHHHHHHhcCCCCCC---------------C
Q 043517 391 TAICTGKTSDLSLDHANMAELWIATDNSFIKS----------TSADVLDALREAIATTSYDEAA---------------V 445 (956)
Q Consensus 391 ~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~~~~---------------~ 445 (956)
++||+|||||||+|+|+|.++|.++.....+. ..+.....+..+..+|+.+... +
T Consensus 367 s~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~ 446 (1019)
T KOG0203|consen 367 STICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGD 446 (1019)
T ss_pred eeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCC
Confidence 99999999999999999999999875432210 1233455667788899887543 2
Q ss_pred CcHHHHHHHHHhhcCCChhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCC
Q 043517 446 DDDDALLLWAKEFLDVDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHG 522 (956)
Q Consensus 446 p~e~Al~~~~~~~~~~~~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~ 522 (956)
+.|.||++++. ..--+...+|+.++ +.||+|.+|+.-.+++..+. ...+ +.+.+|||||.++++|+.+.. +|
T Consensus 447 ~se~ALlk~~e-~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~--~~~~-~~l~mKGape~il~~CSTi~i-~g 521 (1019)
T KOG0203|consen 447 ASEVALLKFIE-LILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDP--SDPR-FLLVMKGAPERILDRCSTILI-NG 521 (1019)
T ss_pred HHHHHHHHHHH-HhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCC--CCcc-ceeeecCChHHHHhhccceee-cC
Confidence 48999999998 44344456666665 89999999999999886653 1134 778899999999999999887 88
Q ss_pred ccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHH-------HHhhhccCcEEEEEeeecccCcHHHHHHH
Q 043517 523 TLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEE-------IIELTECGLTWLGLVRLKSAYASEVKQAI 595 (956)
Q Consensus 523 ~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~-------~~~~~e~~l~~lGli~~~d~lr~~~~~~I 595 (956)
+..|++++.++.+.+.+.++.. .|-||++++++.++.+.... ..+..-.++.|+|++++.||||..+++++
T Consensus 522 ~e~pld~~~~~~f~~ay~~lg~--~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av 599 (1019)
T KOG0203|consen 522 EEKPLDEKLKEAFQEAYLELGG--LGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAV 599 (1019)
T ss_pred CCCCcCHHHHHHHHHHHHHhhh--cchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhh
Confidence 9999999999999999999999 99999999999887554321 13344578999999999999999999999
Q ss_pred HHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCC---------------CCCCcceeeechhhhcCCHHHHHhh
Q 043517 596 EDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDH---------------SNGYDAAVIEASVFRSSSEETRSLM 660 (956)
Q Consensus 596 ~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~---------------~~~~~~~~i~g~~~~~~~~~~~~~~ 660 (956)
..|| .+|||++|+||||+.||+++|++.|| +..+.+.. ..+....+++|+++.+++.++++++
T Consensus 600 ~~Cr-sAGIkvimVTgdhpiTAkAiA~~vgI-i~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~i 677 (1019)
T KOG0203|consen 600 GKCR-SAGIKVIMVTGDHPITAKAIAKSVGI-ISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDEL 677 (1019)
T ss_pred hhhh-hhCceEEEEecCccchhhhhhhheee-ecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHH
Confidence 9999 99999999999999999999999998 56544321 1234788999999999999999999
Q ss_pred hccce--EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHH
Q 043517 661 VDNVR--VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAAN 738 (956)
Q Consensus 661 ~~~~~--v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~ 738 (956)
+.+.. ||||.||+||+.||+..|++|.+|+++|||+||+||||+||||||||..|+|++|++||++++||||++|+..
T Consensus 678 l~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtG 757 (1019)
T KOG0203|consen 678 LQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTG 757 (1019)
T ss_pred HHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheee
Confidence 98876 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCC
Q 043517 739 LKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAA 816 (956)
Q Consensus 739 i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~ 816 (956)
++|||-+|+|+||.+.|.++.|+..+...+++.+++.|.|+.++++|.+++.+|++|+++|++|+| ++|++ +||
T Consensus 758 VEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r----~PR 833 (1019)
T KOG0203|consen 758 VEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLR----PPR 833 (1019)
T ss_pred cccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhc----CCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999 99999 999
Q ss_pred C-CCCCCcchHHHHHHHHH-HHHHHHHHHHHHHhhhh---hhc-----cc------------c-------------cccc
Q 043517 817 A-SASPLANKTVWRNIILQ-VLYQVFVLSATQLKGNE---LLQ-----VQ------------A-------------NKTD 861 (956)
Q Consensus 817 ~-~~~~l~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~---~~~-----~~------------~-------------~~~~ 861 (956)
+ .++++++.+++.....| +.+|++..|+.||.... ++. +. + -...
T Consensus 834 ~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~t 913 (1019)
T KOG0203|consen 834 NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYT 913 (1019)
T ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHh
Confidence 8 67889998877655444 66677666655543321 111 10 0 1224
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHH--HHHHhhccccCCChhhHHHHHHH
Q 043517 862 LKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVI--EMVTVVTHGTRMDLKDWCVCIGI 939 (956)
Q Consensus 862 ~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~~~~~~~~ 939 (956)
..|..|.+++.+|++.++.+++ ++-++|+ .-.+|+.+++++++..++..++. +.....+++.|+.|.+|+..+.+
T Consensus 914 c~taFfvsIvV~Q~adLii~KT-RRnSlfq--qGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~ 990 (1019)
T KOG0203|consen 914 CYTAFFISIVVVQWADLIICKT-RRNSIFQ--QGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPF 990 (1019)
T ss_pred hhhheeeeehHHhHhhHHhhhc-chhHHHH--hhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccc
Confidence 6788899999999999999988 4567888 44899999999988777766655 44777899999999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 043517 940 AVMTLPTGLVAKCI 953 (956)
Q Consensus 940 ~~~~~~~~~i~k~~ 953 (956)
+++.++.+|+.|++
T Consensus 991 ~ilIfvydE~Rk~~ 1004 (1019)
T KOG0203|consen 991 GILIFVYDEVRKLF 1004 (1019)
T ss_pred eeeeeeHHHHHhHh
Confidence 99999999999975
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-99 Score=861.81 Aligned_cols=778 Identities=17% Similarity=0.210 Sum_probs=624.3
Q ss_pred CCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCCcccchhhH
Q 043517 49 DIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGA 128 (956)
Q Consensus 49 ~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~~~~~~~~~~~~~~~ 128 (956)
..||+. +++.+|++.||+|.+. .+.++++.++.++..+|+++++.++.++|....+ ++++.
T Consensus 158 ~~gL~~--~~~~~r~~iyG~N~i~---------l~ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~Y--------~~YA~ 218 (1140)
T KOG0208|consen 158 SNGLER--QEIIDRRIIYGRNVIS---------LPIKSISQILVKEVLNPFYLFQAFSVALWLADSY--------YYYAF 218 (1140)
T ss_pred cCCccH--HHHHhHHhhcCCceee---------eecccHHHHHHHhccchHHHHHhHHhhhhhcccc--------hhhhh
Confidence 469999 9999999999999999 8899999999999999999999999999999887 78888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCC-CCcccccEEEEeeCC
Q 043517 129 MVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQT-GDQVPADGLFVHGKN 207 (956)
Q Consensus 129 ~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~-G~~vPaD~~ll~g~~ 207 (956)
+|+++.+..++.+.++..++++.++++ ......|+|+|||.|++|+++|||||||+++.+ |-..|||++|++|++
T Consensus 219 cI~iisv~Si~~sv~e~r~qs~rlr~m----v~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c 294 (1140)
T KOG0208|consen 219 CIVIISVYSIVLSVYETRKQSIRLRSM----VKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC 294 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE
Confidence 888888888888888888888888877 345679999999999999999999999999998 999999999999998
Q ss_pred ceecccC-----------------------------CCCCeEeeccEEee------eeEEEEEEEecCcChHHHHHHhhc
Q 043517 208 LKLDDGD-----------------------------DKLPCIFTGAKVVG------GECSMLVTSVGENTETSMLMKLLS 252 (956)
Q Consensus 208 l~vdes~-----------------------------~~~~~l~~Gt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~ 252 (956)
.||||+ ...|.+|+||.+++ +.+.++|++||.+|..|++.+++.
T Consensus 295 -ivNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsil 373 (1140)
T KOG0208|consen 295 -IVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSIL 373 (1140)
T ss_pred -EeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhc
Confidence 999999 45789999999997 458999999999999999999999
Q ss_pred ccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhcc
Q 043517 253 KDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQ 332 (956)
Q Consensus 253 ~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (956)
.++ .....+-+...++...++.++++..+.+.++ .. ..
T Consensus 374 yPk------P~~fkfyrds~~fi~~l~~ia~~gfiy~~i~----l~--------------------------------~~ 411 (1140)
T KOG0208|consen 374 YPK------PVNFKFYRDSFKFILFLVIIALIGFIYTAIV----LN--------------------------------LL 411 (1140)
T ss_pred CCC------CcccHHHHHHHHHHHHHHHHHHHHHHHHhHh----HH--------------------------------Hc
Confidence 987 4444455555555444444433332222222 11 12
Q ss_pred CcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEE
Q 043517 333 GATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELW 412 (956)
Q Consensus 333 ~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~ 412 (956)
|++.+..+++++.++++.+|+| ||++++++..++.+||+|+||.|-+|..+...|++|++|||||||||++.+++..+.
T Consensus 412 g~~~~~iiirsLDliTi~VPPA-LPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 412 GVPLKTIIIRSLDLITIVVPPA-LPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred CCCHHHHhhhhhcEEEEecCCC-chhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 4444588999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccccC---------C--------CCH--HHHHHHHHHHHhcCCCC------CCCCcHHHHHHHHHhhc--------
Q 043517 413 IATDNSFIK---------S--------TSA--DVLDALREAIATTSYDE------AAVDDDDALLLWAKEFL-------- 459 (956)
Q Consensus 413 ~~~~~~~~~---------~--------~~~--~~~~~l~~~~~~~~~~~------~~~p~e~Al~~~~~~~~-------- 459 (956)
+....-... . .+. .....+..+++.||+.. +.||+|.-+.+..+|.+
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~ 570 (1140)
T KOG0208|consen 491 PVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDE 570 (1140)
T ss_pred eccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccch
Confidence 754321100 0 000 01235678899999754 34576655555444322
Q ss_pred -----C-C-----Chhh-----hcc----cc---cccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchh
Q 043517 460 -----D-V-----DGDK-----MKQ----NC---TVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTH 516 (956)
Q Consensus 460 -----~-~-----~~~~-----~~~----~~---~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~ 516 (956)
+ . .+.. ..+ .+ +.+||+|..+||||+++.++. ++ ..+|+|||||.|.+.|.+
T Consensus 571 ~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e----~~-~~~ftKGaPE~I~~ic~p 645 (1140)
T KOG0208|consen 571 ATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGE----DK-MMVFTKGAPESIAEICKP 645 (1140)
T ss_pred hhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCC----Cc-eEeeccCCHHHHHHhcCc
Confidence 0 0 0000 000 01 189999999999999998765 56 999999999999999974
Q ss_pred ccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccch----HHHHhhhccCcEEEEEeeecccCcHHHH
Q 043517 517 YLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNE----EEIIELTECGLTWLGLVRLKSAYASEVK 592 (956)
Q Consensus 517 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~----~~~~~~~e~~l~~lGli~~~d~lr~~~~ 592 (956)
. ..++++++.++.|+. +|+||+|+|+|+++...- ...|+..|+|++|+|++.||+++|++++
T Consensus 646 ~------------tvP~dy~evl~~Yt~--~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~ 711 (1140)
T KOG0208|consen 646 E------------TVPADYQEVLKEYTH--QGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETK 711 (1140)
T ss_pred c------------cCCccHHHHHHHHHh--CCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccH
Confidence 3 346789999999999 999999999999987621 1268999999999999999999999999
Q ss_pred HHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCC----------C--------------------C------
Q 043517 593 QAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAED----------H--------------------S------ 636 (956)
Q Consensus 593 ~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~----------~--------------------~------ 636 (956)
.+|++|+ +++||++|+||||..||..+||+||+ +++.... + .
T Consensus 712 ~VI~eL~-~AnIRtVMcTGDNllTaisVakeCgm-i~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~ 789 (1140)
T KOG0208|consen 712 RVIDELN-RANIRTVMCTGDNLLTAISVAKECGM-IEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLA 789 (1140)
T ss_pred HHHHHHH-hhcceEEEEcCCchheeeehhhcccc-cCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCcccc
Confidence 9999999 99999999999999999999999999 6654320 0 0
Q ss_pred ----------CCCcceeeechhhhcC---CHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhh
Q 043517 637 ----------NGYDAAVIEASVFRSS---SEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLK 703 (956)
Q Consensus 637 ----------~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~ 703 (956)
..+...+++|+.++-+ ..+.+..++.+..|||||+|+||.++|+.+|+.|+.|+|||||+|||.|||
T Consensus 790 ~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALK 869 (1140)
T KOG0208|consen 790 SVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALK 869 (1140)
T ss_pred CCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhh
Confidence 0135678888888744 457788899999999999999999999999999999999999999999999
Q ss_pred hCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHH
Q 043517 704 EADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQ 783 (956)
Q Consensus 704 ~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q 783 (956)
+||+||++++ .+|.-+|.+...-.+.+.+.+.|+|||+.+.+...+++|+..|.+++.+.. ..++.....+++.|
T Consensus 870 aAdvGISLSe---aEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv--~~LY~~~~nl~D~Q 944 (1140)
T KOG0208|consen 870 AADVGISLSE---AEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISV--VFLYLINSNLGDLQ 944 (1140)
T ss_pred hcccCcchhh---hhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhh--heeeeecccccchh
Confidence 9999999973 356677999998889999999999999999999999999999998875553 34555567999999
Q ss_pred HHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhh--hhhccc---
Q 043517 784 LLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGN--ELLQVQ--- 856 (956)
Q Consensus 784 ~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~--- 856 (956)
.++++++...+.+++|+..++ ++-. .+|+..++++..+...++|.++..++.++.++... .|+...
T Consensus 945 fl~iDLlii~pia~~m~~~~a~~~L~~-------~rP~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~ 1017 (1140)
T KOG0208|consen 945 FLFIDLLIITPIAVMMSRFDASDKLFP-------KRPPTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQ 1017 (1140)
T ss_pred hhhhHHHHHHHHHHHHccCcHHHHhcC-------CCCCccccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCC
Confidence 999999999999999998888 5543 45677999999999999888887777777665543 343311
Q ss_pred ---cccccchhHHHHHHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHHHH-----HHhhccccCC
Q 043517 857 ---ANKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEM-----VTVVTHGTRM 928 (956)
Q Consensus 857 ---~~~~~~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~~~~f~~~~l 928 (956)
+..+...|.+|..-.+..+++++ .++.+++|+ .+.|+|+.+...+....+..+.++.. ....++.+++
T Consensus 1018 ~~~nt~s~~~T~lF~vS~fqYi~~a~---v~S~g~pfr-~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~ 1093 (1140)
T KOG0208|consen 1018 VDDNTQSSDNTSLFFVSSFQYIFIAL---VLSKGSPFR-RPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYI 1093 (1140)
T ss_pred cCcccccceeeEeeehhHHHHHHhhe---eeccCCccc-CchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceecc
Confidence 24556677777766665555443 345688998 79999998866655444444433321 1234666776
Q ss_pred Ch
Q 043517 929 DL 930 (956)
Q Consensus 929 ~~ 930 (956)
+-
T Consensus 1094 ~~ 1095 (1140)
T KOG0208|consen 1094 PT 1095 (1140)
T ss_pred Cc
Confidence 65
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-97 Score=934.07 Aligned_cols=805 Identities=17% Similarity=0.184 Sum_probs=599.7
Q ss_pred cCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCCcccchhhHHHH-HHHHHHHHHHHHH
Q 043517 66 FGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVF-VVISSVVCISSLF 144 (956)
Q Consensus 66 ~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~~~~~~~~~~~~~~~~i~-~~~l~~~~i~~~~ 144 (956)
|..|.+. ++|++....+++.+++||+++.|+++++++++++++..++.+ +...+..+ +++++..+.+.++
T Consensus 1 ~~~N~i~-----tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~----~~t~~~pL~~v~~~~~~~~~~e 71 (1057)
T TIGR01652 1 FCSNKIS-----TTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY----RGTSIVPLAFVLIVTAIKEAIE 71 (1057)
T ss_pred CCCCccc-----CccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC----ccHhHHhHHHHHHHHHHHHHHH
Confidence 5667777 455555555578999999999999999999999998764333 22222233 3333456778888
Q ss_pred HHHHHHHHHHhHhhhhhcCCcEEEEEC-CEEEEEEccccccCcEEEeCCCCcccccEEEEeeCC----ceecccC-----
Q 043517 145 RFVKNWINELLVSKRTSRRAAVKVMRD-GRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKN----LKLDDGD----- 214 (956)
Q Consensus 145 ~~~~~~~~~~l~~~~~~~~~~~~V~Rd-g~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~----l~vdes~----- 214 (956)
+++++++.+++ ++..++|+|+ |++++++++||+|||+|.|++||+||||++++++++ +.||||.
T Consensus 72 d~~r~~~d~~~------n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs 145 (1057)
T TIGR01652 72 DIRRRRRDKEV------NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGET 145 (1057)
T ss_pred HHHHHHhHHHH------hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCee
Confidence 88888776554 5679999997 899999999999999999999999999999998654 5889888
Q ss_pred ----------C-------------------------------------------CCCeEeeccEEee-eeEEEEEEEecC
Q 043517 215 ----------D-------------------------------------------KLPCIFTGAKVVG-GECSMLVTSVGE 240 (956)
Q Consensus 215 ----------~-------------------------------------------~~~~l~~Gt~v~~-g~~~~~V~~tG~ 240 (956)
. .+|++|+||.+.+ |.++|+|++||.
T Consensus 146 ~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~ 225 (1057)
T TIGR01652 146 NLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGH 225 (1057)
T ss_pred cceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEch
Confidence 0 1267899999999 899999999999
Q ss_pred cChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC----cccc
Q 043517 241 NTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGG----VRST 316 (956)
Q Consensus 241 ~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 316 (956)
+|.+++ +....+ .++|++++.++++..+++.+.+++|++.+++.. ++.. .++...|+.. ..+.
T Consensus 226 ~Tk~~~---n~~~~~------~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~---~~~~-~~~~~~~yl~~~~~~~~~ 292 (1057)
T TIGR01652 226 DTKLMR---NATQAP------SKRSRLEKELNFLIIILFCLLFVLCLISSVGAG---IWND-AHGKDLWYIRLDVSERNA 292 (1057)
T ss_pred hhhhhh---cCCCCc------ccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHH---heec-ccCCCccceecCcccccc
Confidence 997765 334445 788999999999999988888888777666532 1111 0111133210 0000
Q ss_pred hhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH------hhcccC----Cccccccccccc
Q 043517 317 VKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYAS------KKLPCF----RATARNLPVCSS 386 (956)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~------~~l~~~----~ilvk~~~~~e~ 386 (956)
....+ ..+..++.++..++|++ ||+.++++...++ ++|.++ ++.+|+.+++|+
T Consensus 293 ~~~~~----------------~~~~~~~~L~~~~IPis-L~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~ 355 (1057)
T TIGR01652 293 AANGF----------------FSFLTFLILFSSLIPIS-LYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEE 355 (1057)
T ss_pred hhHHH----------------HHHHHHHHHHhhhccee-eeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHH
Confidence 11222 46778899999999999 9999999999988 788864 599999999999
Q ss_pred ccceeEEeeCccccccCCceEEEEEEecCcccccCC----------C--------------------C------------
Q 043517 387 LGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKS----------T--------------------S------------ 424 (956)
Q Consensus 387 lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~----------~--------------------~------------ 424 (956)
||++++||+|||||||+|+|+++++++++..|.... . +
T Consensus 356 LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (1057)
T TIGR01652 356 LGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKP 435 (1057)
T ss_pred hcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCc
Confidence 999999999999999999999999998765543110 0 0
Q ss_pred -HHHHHHHHHHHHhcCCCC--------------CCCCcHHHHHHHHHhhcCCChhhhc--------------cccc---c
Q 043517 425 -ADVLDALREAIATTSYDE--------------AAVDDDDALLLWAKEFLDVDGDKMK--------------QNCT---V 472 (956)
Q Consensus 425 -~~~~~~l~~~~~~~~~~~--------------~~~p~e~Al~~~~~~~~~~~~~~~~--------------~~~~---~ 472 (956)
.+....+..++++||++. ..+|+|.|++++++ ..|+...... ..++ .
T Consensus 436 ~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~-~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~ 514 (1057)
T TIGR01652 436 NAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAAR-DVGFVFFERTPKSISLLIEMHGETKEYEILNV 514 (1057)
T ss_pred hhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHH-HCCCEEEEecCCceEEEEEeCCCEEEEEEEEe
Confidence 011234556888998752 23699999999998 8887543211 1233 7
Q ss_pred cccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceee
Q 043517 473 EAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCI 552 (956)
Q Consensus 473 ~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl 552 (956)
+||+|+||||+|+++.++ ++ +++|+|||||.|+++|+.. +++.++++.+.+++|+. +|+||+
T Consensus 515 ~pF~s~rKrmSviv~~~~-----~~-~~l~~KGA~e~il~~~~~~----------~~~~~~~~~~~~~~~a~--~GlRtL 576 (1057)
T TIGR01652 515 LEFNSDRKRMSVIVRNPD-----GR-IKLLCKGADTVIFKRLSSG----------GNQVNEETKEHLENYAS--EGLRTL 576 (1057)
T ss_pred cccCCCCCeEEEEEEeCC-----Ce-EEEEEeCcHHHHHHHhhcc----------chhHHHHHHHHHHHHHH--cCCcEE
Confidence 899999999999999765 45 8899999999999999741 23557788999999999 999999
Q ss_pred eeEEeeccccchHHH---------------------HhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcC
Q 043517 553 SFACKRVEQQNEEEI---------------------IELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILE 611 (956)
Q Consensus 553 ~~A~k~~~~~~~~~~---------------------~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TG 611 (956)
++|||.+++++...+ .+.+|+|++|+|+++++||||++++++|+.|+ ++||++||+||
T Consensus 577 ~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~-~AGIkv~mlTG 655 (1057)
T TIGR01652 577 CIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLR-QAGIKIWVLTG 655 (1057)
T ss_pred EEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHH-HCCCeEEEEcC
Confidence 999999976543221 24579999999999999999999999999999 99999999999
Q ss_pred CCHHHHHHHHHhcCCcccCCCCCCC--------------------------------CCCcceeeechhhhcCCHH----
Q 043517 612 DDINIARLIAINSGLILKPGAEDHS--------------------------------NGYDAAVIEASVFRSSSEE---- 655 (956)
Q Consensus 612 d~~~ta~~ia~~~Gi~~~~~~~~~~--------------------------------~~~~~~~i~g~~~~~~~~~---- 655 (956)
|+.+||.++|++||+ ++.+.+... ......+++|++++.+.++
T Consensus 656 D~~~TA~~IA~~~~i-i~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~ 734 (1057)
T TIGR01652 656 DKVETAINIGYSCRL-LSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEK 734 (1057)
T ss_pred CcHHHHHHHHHHhCC-CCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHH
Confidence 999999999999999 665432100 1123469999999855443
Q ss_pred HHHhhhccce--EEEecChhhHHHHHHHHHhc-CCeEEEEcCCccCHHHhhhCCccEEeCCCChH--HHHhcCCeeeccC
Q 043517 656 TRSLMVDNVR--VMANASPLDKLLMVQCLKQK-GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQ--FARDCSDIVILDE 730 (956)
Q Consensus 656 ~~~~~~~~~~--v~ar~~p~~K~~iv~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~--~ak~~Ad~vl~~~ 730 (956)
++.+++..++ ||||++|+||.++|+.+|+. |++|+|+|||+||+|||++|||||++. |.+ +|+.+||+++.
T Consensus 735 ~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~--g~eg~qA~~aaD~~i~-- 810 (1057)
T TIGR01652 735 EFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGIS--GKEGMQAVMASDFAIG-- 810 (1057)
T ss_pred HHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEec--ChHHHHHHHhhhhhhh--
Confidence 3555666655 99999999999999999998 999999999999999999999999873 444 68999999998
Q ss_pred ChhHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCchHHHHHHHHhhhhHHhHHhhc-cCcc-
Q 043517 731 NFTTIAANL-KWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGE---IPLEPFQLLWVNLIMDVLGALALA-APVS- 804 (956)
Q Consensus 731 ~~~~i~~~i-~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~---~pl~~~q~l~~~~~~~~~~~l~l~-~~~~- 804 (956)
+|+.+.+++ .|||.+|+|+++.+.|.++.|+..+++.+++.++.++ +++.+++++|+|++++.+|+++++ ++++
T Consensus 811 ~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~ 890 (1057)
T TIGR01652 811 QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDV 890 (1057)
T ss_pred hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccC
Confidence 699999996 8899999999999999999999999999988887654 478999999999999999999997 4444
Q ss_pred --c-cccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc-c----cccccchhHHHHHHHHHHHH
Q 043517 805 --L-RVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQV-Q----ANKTDLKAIVFNSFVLCQVF 876 (956)
Q Consensus 805 --~-~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~t~~f~~l~~~~~~ 876 (956)
+ +++.|++|+..+. .++++.+.+..+++.+++++++++++.+........ . .+.....++.|+++++...+
T Consensus 891 ~~~~l~~~P~ly~~~~~-~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 969 (1057)
T TIGR01652 891 SASLSLRYPQLYREGQK-GQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNL 969 (1057)
T ss_pred CHHHHHhChHHHHHhhh-cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHH
Confidence 4 4455888866444 455555555555568899888776554432211100 0 11223344455554444433
Q ss_pred HHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhhc---------cccCCChhhHHHHHHHHHHHHHHH
Q 043517 877 VLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVT---------HGTRMDLKDWCVCIGIAVMTLPTG 947 (956)
Q Consensus 877 ~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~f---------~~~~l~~~~~~~~~~~~~~~~~~~ 947 (956)
.+.. ....|. ++.++++.+++++.+++..+...++ ...--++.+|+.+++..++.++++
T Consensus 970 ~~~~-----~~~~wt-------~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~ 1037 (1057)
T TIGR01652 970 KIAL-----EINRWN-------WISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPR 1037 (1057)
T ss_pred HHHH-----HHhHhH-------HHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHH
Confidence 3211 111222 2333334444444443333222221 111135778988888888888888
Q ss_pred HHHhhc
Q 043517 948 LVAKCI 953 (956)
Q Consensus 948 ~i~k~~ 953 (956)
.++|++
T Consensus 1038 ~~~~~~ 1043 (1057)
T TIGR01652 1038 FTYKAI 1043 (1057)
T ss_pred HHHHHH
Confidence 777754
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-92 Score=885.27 Aligned_cols=720 Identities=17% Similarity=0.176 Sum_probs=562.7
Q ss_pred ccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHHHHH
Q 043517 65 VFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLF 144 (956)
Q Consensus 65 ~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~~~~~~~~~~~~~~~~i~~~~l~~~~i~~~~ 144 (956)
+|..|.+. ++|++--..+++.+++||+.+.|+++++.+++++++..++.+. +...+.+++++++..+.++++
T Consensus 86 ~f~~N~i~-----TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~---~t~~~PL~~vl~v~~ike~~E 157 (1178)
T PLN03190 86 EFAGNSIR-----TAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGR---GASILPLAFVLLVTAVKDAYE 157 (1178)
T ss_pred cCCCCeee-----ccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCc---chHHHHHHHHHHHHHHHHHHH
Confidence 57888888 6777777777788999999999999999999999987644332 222333334444456777788
Q ss_pred HHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCCCcccccEEEEeeCC----ceecccC------
Q 043517 145 RFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKN----LKLDDGD------ 214 (956)
Q Consensus 145 ~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~----l~vdes~------ 214 (956)
+|+++++.+++ ++..++|+|+|++++++++||+|||+|.|++||+||||++++++++ ..||++.
T Consensus 158 d~~r~k~d~~~------N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~ 231 (1178)
T PLN03190 158 DWRRHRSDRIE------NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESN 231 (1178)
T ss_pred HHHHHHhHHhh------cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeee
Confidence 88887775554 5678999999999999999999999999999999999999998432 3788877
Q ss_pred -------------------------------------------------CCCCeEeeccEEeee-eEEEEEEEecCcChH
Q 043517 215 -------------------------------------------------DKLPCIFTGAKVVGG-ECSMLVTSVGENTET 244 (956)
Q Consensus 215 -------------------------------------------------~~~~~l~~Gt~v~~g-~~~~~V~~tG~~T~~ 244 (956)
+.+|++++||.+.+. .++|+|++||.+|.
T Consensus 232 ~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK- 310 (1178)
T PLN03190 232 LKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETK- 310 (1178)
T ss_pred eeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhh-
Confidence 235678888888887 49999999999994
Q ss_pred HHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CCCCCCCCCCCCc------ccc-
Q 043517 245 SMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAW-GDDDHDPEPKGGV------RST- 316 (956)
Q Consensus 245 g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~- 316 (956)
++.+-..++ .|.|++++.++++..+++.+.+++|++++++... |... .++.....|+... ...
T Consensus 311 --~~~N~~~~~------~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~-~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 381 (1178)
T PLN03190 311 --AMLNNSGAP------SKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV-WLRRHRDELDTIPFYRRKDFSEGGPKNY 381 (1178)
T ss_pred --HhhcCCCCC------CCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-hhcccccccccccccccccccccccccc
Confidence 555555555 7899999999999999988888888776665311 2111 1110011122100 000
Q ss_pred -hhhh-hhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCC----------ccccccccc
Q 043517 317 -VKEI-MGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFR----------ATARNLPVC 384 (956)
Q Consensus 317 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~----------ilvk~~~~~ 384 (956)
...+ + ..+ ..+...+.++..+||.+ |++.+.+.....+..+.++. +.+|+.+..
T Consensus 382 ~~~~~~~-~~~------------~~f~~~lil~~~~IPIS-L~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~ 447 (1178)
T PLN03190 382 NYYGWGW-EIF------------FTFLMSVIVFQIMIPIS-LYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNIN 447 (1178)
T ss_pred ccchhhH-HHH------------HHHHHHHHHHHhhccee-eeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcch
Confidence 0000 0 000 33444566777999999 99999999976566665433 789999999
Q ss_pred ccccceeEEeeCccccccCCceEEEEEEecCcccccCC------------------------C--C-------------H
Q 043517 385 SSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKS------------------------T--S-------------A 425 (956)
Q Consensus 385 e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~------------------------~--~-------------~ 425 (956)
|+||+|++||+|||||||+|+|+++++.+.+..|+.+. . + +
T Consensus 448 EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (1178)
T PLN03190 448 EDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTE 527 (1178)
T ss_pred hhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccch
Confidence 99999999999999999999999999998765442100 0 0 0
Q ss_pred --HHHHHHHHHHHhcCCCCC------------------CCCcHHHHHHHHHhhcCC------------Chhhhccccc--
Q 043517 426 --DVLDALREAIATTSYDEA------------------AVDDDDALLLWAKEFLDV------------DGDKMKQNCT-- 471 (956)
Q Consensus 426 --~~~~~l~~~~~~~~~~~~------------------~~p~e~Al~~~~~~~~~~------------~~~~~~~~~~-- 471 (956)
.....+..++++||++.+ .+|+|.||+++|+ ++|+ +....+..++
T Consensus 528 ~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~-~~G~~l~~r~~~~i~i~~~~~~~~~~il 606 (1178)
T PLN03190 528 EAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAA-AYGFMLIERTSGHIVIDIHGERQRFNVL 606 (1178)
T ss_pred hhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHH-HCCCeEecccCCeEEEeeccceecceeE
Confidence 112345678899998643 1499999999999 8887 3233334444
Q ss_pred -ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccce
Q 043517 472 -VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLR 550 (956)
Q Consensus 472 -~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~r 550 (956)
++||+|+||||||+++.++ ++ +.+|+|||||.|+++|+... +++.++++.+.+++|++ +|+|
T Consensus 607 ~~~pF~S~rKrMSvIv~~~~-----~~-~~l~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~--~GlR 669 (1178)
T PLN03190 607 GLHEFDSDRKRMSVILGCPD-----KT-VKVFVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSS--LGLR 669 (1178)
T ss_pred EEecccccccEEEEEEEcCC-----Cc-EEEEEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHh--cCCc
Confidence 8899999999999998765 45 88999999999999997542 23457788999999999 9999
Q ss_pred eeeeEEeeccccchHHH---------------------HhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEE
Q 043517 551 CISFACKRVEQQNEEEI---------------------IELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLI 609 (956)
Q Consensus 551 vl~~A~k~~~~~~~~~~---------------------~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~ 609 (956)
||++|||.++.++.+.| .+.+|+||+++|+++++|++|++++++|++|+ ++||++||+
T Consensus 670 tL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~-~agi~v~ml 748 (1178)
T PLN03190 670 TLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLR-TAGIKVWVL 748 (1178)
T ss_pred eEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHH-HCCCEEEEE
Confidence 99999999976543321 24579999999999999999999999999999 999999999
Q ss_pred cCCCHHHHHHHHHhcCCcccCCCCCCC----------------------------------------CCCcceeeechhh
Q 043517 610 LEDDINIARLIAINSGLILKPGAEDHS----------------------------------------NGYDAAVIEASVF 649 (956)
Q Consensus 610 TGd~~~ta~~ia~~~Gi~~~~~~~~~~----------------------------------------~~~~~~~i~g~~~ 649 (956)
|||+..||.+||++||+ ++++.+... ..+...+++|.++
T Consensus 749 TGD~~~tAi~IA~s~~L-l~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L 827 (1178)
T PLN03190 749 TGDKQETAISIGYSSKL-LTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSL 827 (1178)
T ss_pred CCCCHHHHHHHHHHhCC-CCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHH
Confidence 99999999999999999 766432100 0123589999999
Q ss_pred hcCCH----HHHHhhhccce--EEEecChhhHHHHHHHHHhc-CCeEEEEcCCccCHHHhhhCCccEEeCCCChH--HHH
Q 043517 650 RSSSE----ETRSLMVDNVR--VMANASPLDKLLMVQCLKQK-GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQ--FAR 720 (956)
Q Consensus 650 ~~~~~----~~~~~~~~~~~--v~ar~~p~~K~~iv~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~--~ak 720 (956)
+.+.+ +++.++..+++ ||||++|+||.++|+.+|+. +++|+|||||+||++||++|||||++ .|++ +|+
T Consensus 828 ~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGI--sG~EG~qA~ 905 (1178)
T PLN03190 828 VYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAV 905 (1178)
T ss_pred HHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeee--cCchhHHHH
Confidence 87764 45667777766 79999999999999999998 58999999999999999999999965 4555 899
Q ss_pred hcCCeeeccCChhHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CchHHHHHHHHhhhhHHhH
Q 043517 721 DCSDIVILDENFTTIAAN-LKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEI---PLEPFQLLWVNLIMDVLGA 796 (956)
Q Consensus 721 ~~Ad~vl~~~~~~~i~~~-i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~---pl~~~q~l~~~~~~~~~~~ 796 (956)
.+||+++. .|..+.++ +.|||..|.|+.+.+.|.+++|++.+++++++.++.+++ .+.++.+.++|++++.+|.
T Consensus 906 ~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPi 983 (1178)
T PLN03190 906 MASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPT 983 (1178)
T ss_pred Hhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999 99999999 568999999999999999999999999999999988766 6689999999999999999
Q ss_pred Hhhc-cCcc----ccccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 043517 797 LALA-APVS----LRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQL 847 (956)
Q Consensus 797 l~l~-~~~~----~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 847 (956)
++++ +|+. .+++.|+||+..+.+..+-.+.+|.| ++.+++++++++++.+
T Consensus 984 i~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w-~~~~i~qs~iiff~~~ 1038 (1178)
T PLN03190 984 IVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLT-MIDTLWQSAVVFFVPL 1038 (1178)
T ss_pred HHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9996 7777 78888999988766655544455554 5578898887775543
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-86 Score=777.94 Aligned_cols=539 Identities=17% Similarity=0.231 Sum_probs=437.0
Q ss_pred HHHhhHHHHHHHHHHHHHHHhccccC--CCcc-cchhhHHHHHHHHHHHHHHHHH----HHHHHHHHHHhHhhhhhcCC-
Q 043517 93 DSIKDSTVILLLCCATLSLLLGIKRN--GFEQ-GILDGAMVFVVISSVVCISSLF----RFVKNWINELLVSKRTSRRA- 164 (956)
Q Consensus 93 ~~~~~~~~~~ll~~~~ls~~~~~~~~--~~~~-~~~~~~~i~~~~l~~~~i~~~~----~~~~~~~~~~l~~~~~~~~~- 164 (956)
.++++|+.++++++++++++++.... +... ..++++.++++++++.+++.+. +++.+++.++| ++..++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L---~~~~~~~ 104 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANAL---RQTQTEM 104 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCCCcc
Confidence 46789999999999999998876211 1100 1245677777777777777777 56666677777 445554
Q ss_pred cEE-EEECCEEEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC----------CCC---CeEeeccEEeeee
Q 043517 165 AVK-VMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD----------DKL---PCIFTGAKVVGGE 230 (956)
Q Consensus 165 ~~~-V~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~----------~~~---~~l~~Gt~v~~g~ 230 (956)
+++ |.|||++++|++++|+|||+|.|++||+|||||++++|+. .||||+ +.+ +.+|+||.|.+|+
T Consensus 105 ~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~ 183 (673)
T PRK14010 105 KARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDW 183 (673)
T ss_pred eEEEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecce
Confidence 675 7899999999999999999999999999999999999987 999999 234 6699999999999
Q ss_pred EEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 043517 231 CSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPK 310 (956)
Q Consensus 231 ~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~ 310 (956)
+.++|+++|.+|++||+.++++.++ .++||+|.....+...+..+.+ .+++++..+... .
T Consensus 184 ~~i~Vta~g~~T~lgki~~lve~a~------~~ktp~e~~l~~l~~~l~ii~l-----~~~~~~~~~~~~------~--- 243 (673)
T PRK14010 184 LEVEITSEPGHSFLDKMIGLVEGAT------RKKTPNEIALFTLLMTLTIIFL-----VVILTMYPLAKF------L--- 243 (673)
T ss_pred EEEEEEEecccCHHHHHHHHHhhcc------ccCCHHHHHHHHHHHHHhHHHH-----HHHHHHHHHHhh------c---
Confidence 9999999999999999999999888 7899999776665443332211 112211111000 0
Q ss_pred CCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccce
Q 043517 311 GGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLV 390 (956)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v 390 (956)
++. ..+...+++++++|||+ ||..+++..+.+++||+|+|+++|+++++|++|++
T Consensus 244 --------~~~----------------~~~~~~val~V~~IP~a-L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v 298 (673)
T PRK14010 244 --------NFN----------------LSIAMLIALAVCLIPTT-IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDV 298 (673)
T ss_pred --------cHH----------------HHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCC
Confidence 111 45667788888899999 99999999999999999999999999999999999
Q ss_pred eEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhcccc
Q 043517 391 TAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNC 470 (956)
Q Consensus 391 ~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~ 470 (956)
|++|||||||||+|++.+.++...+.. +..+++..+..++... .||+++|++++++ +.+.+....+.+
T Consensus 299 ~vI~~DKTGTLT~Gn~~~~~~~~~~~~--------~~~~ll~~a~~~~~~s--~~P~~~AIv~~a~-~~~~~~~~~~~~- 366 (673)
T PRK14010 299 NVLILDKTGTITYGNRMADAFIPVKSS--------SFERLVKAAYESSIAD--DTPEGRSIVKLAY-KQHIDLPQEVGE- 366 (673)
T ss_pred CEEEEeCCCcCCCCCeEEEEEEeCCCc--------cHHHHHHHHHHhcCCC--CChHHHHHHHHHH-HcCCCchhhhcc-
Confidence 999999999999988888776543221 1223444444333332 3599999999998 666654322222
Q ss_pred cccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccce
Q 043517 471 TVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLR 550 (956)
Q Consensus 471 ~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~r 550 (956)
..||++++|+|++.++ ++ .+.||+||.++++|+. +|... +.++.+..+++++ +|+|
T Consensus 367 -~~pF~~~~k~~gv~~~--------g~---~i~kGa~~~il~~~~~----~g~~~------~~~~~~~~~~~a~--~G~~ 422 (673)
T PRK14010 367 -YIPFTAETRMSGVKFT--------TR---EVYKGAPNSMVKRVKE----AGGHI------PVDLDALVKGVSK--KGGT 422 (673)
T ss_pred -eeccccccceeEEEEC--------CE---EEEECCHHHHHHHhhh----cCCCC------chHHHHHHHHHHh--CCCe
Confidence 6899999999999753 21 3459999999999984 12211 1235666778888 9999
Q ss_pred eeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccC
Q 043517 551 CISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKP 630 (956)
Q Consensus 551 vl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~ 630 (956)
+++++. |++++|+++++||+|||++++|++|| ++||+++|+||||+.||.++|+++|+ ++
T Consensus 423 ~l~v~~-----------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr-~~GI~vvMiTGDn~~TA~aIA~elGI--~~ 482 (673)
T PRK14010 423 PLVVLE-----------------DNEILGVIYLKDVIKDGLVERFRELR-EMGIETVMCTGDNELTAATIAKEAGV--DR 482 (673)
T ss_pred EEEEEE-----------------CCEEEEEEEeecCCcHHHHHHHHHHH-HCCCeEEEECCCCHHHHHHHHHHcCC--ce
Confidence 999874 78999999999999999999999999 99999999999999999999999999 55
Q ss_pred CCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 631 GAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 631 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
+|+|++||||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 -----------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 527 (673)
T PRK14010 483 -----------------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLA 527 (673)
T ss_pred -----------------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEE
Confidence 899999999999999999999999999999999999999999999
Q ss_pred eCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043517 711 IGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAI 772 (956)
Q Consensus 711 mg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~ 772 (956)
|| +|+|+||++||+|+++||++.|++++++||++|.|+++++.|.++.|+..++..+...+
T Consensus 528 Mg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 528 MN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred eC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999999999999987665544333
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-89 Score=749.67 Aligned_cols=697 Identities=19% Similarity=0.261 Sum_probs=557.2
Q ss_pred hhhCCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHH
Q 043517 32 HQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSL 111 (956)
Q Consensus 32 ~~~~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~ 111 (956)
.+-++++++.+.|.+..+ |||+ +|+++|++.||+|++. .++.+.+..|+.-+.+|..+.+-.++++..
T Consensus 18 l~~~p~eeVfeeL~~t~~-GLt~--~E~~eRlk~fG~Nkle---------Ekken~~lKFl~Fm~~PlswVMEaAAimA~ 85 (942)
T KOG0205|consen 18 LEAIPIEEVFEELLCTRE-GLTS--DEVEERLKIFGPNKLE---------EKKESKFLKFLGFMWNPLSWVMEAAAIMAI 85 (942)
T ss_pred cccCchhhhHHHHhcCCC-CCch--HHHHHHHHhhCchhhh---------hhhhhHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 455789999999999866 9999 9999999999999999 677777788888888999999999999887
Q ss_pred HhccccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeC
Q 043517 112 LLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQ 191 (956)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~ 191 (956)
.+.. ..|.++.|.|...|..+++++..+++++|+.+.....+| +....++++|+|||+|.++++++||||||+.++
T Consensus 86 ~Lan-g~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L---~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik 161 (942)
T KOG0205|consen 86 GLAN-GGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAAL---MAGLAPKAKVLRDGKWSEQEASILVPGDILSIK 161 (942)
T ss_pred HHhc-CCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHH---HhccCcccEEeecCeeeeeeccccccCceeeec
Confidence 7653 345677899999999999999999999999999999988 455677999999999999999999999999999
Q ss_pred CCCcccccEEEEeeCCceecccC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccC
Q 043517 192 TGDQVPADGLFVHGKNLKLDDGD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQD 261 (956)
Q Consensus 192 ~G~~vPaD~~ll~g~~l~vdes~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~ 261 (956)
.||+||||++|++|+-|+||+|. +.++.+|+||.|.+|++.++|++||.+|..||.+.++...
T Consensus 162 ~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst------- 234 (942)
T KOG0205|consen 162 LGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST------- 234 (942)
T ss_pred cCCEecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCC-------
Confidence 99999999999999999999999 6789999999999999999999999999999999999874
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHH
Q 043517 262 YKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYV 341 (956)
Q Consensus 262 ~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (956)
.....+|+-++.+..+..+.+.+.-++.+++. +... . ... ....
T Consensus 235 ~~~GHFqkVLt~IGn~ci~si~~g~lie~~vm---y~~q-----~------------R~~----------------r~~i 278 (942)
T KOG0205|consen 235 NQVGHFQKVLTGIGNFCICSIALGMLIEITVM---YPIQ-----H------------RLY----------------RDGI 278 (942)
T ss_pred CCcccHHHHHHhhhhHHHHHHHHHHHHHHHhh---hhhh-----h------------hhh----------------hhhh
Confidence 46788999998887765444333222222221 1111 0 011 2233
Q ss_pred HHHHH-HHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEE--E--EecCc
Q 043517 342 EMLSI-LVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAE--L--WIATD 416 (956)
Q Consensus 342 ~~i~l-l~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~--i--~~~~~ 416 (956)
..+.+ ++..+|.| +|.++++.++.|+.+|+++|+++|+..++|+++.+|++|+|||||||.|+++|.+ + +..+
T Consensus 279 ~nLlvllIGgiPia-mPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g- 356 (942)
T KOG0205|consen 279 DNLLVLLIGGIPIA-MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG- 356 (942)
T ss_pred hheheeeecccccc-cceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC-
Confidence 44444 44459999 9999999999999999999999999999999999999999999999999999988 3 3322
Q ss_pred ccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhccccc---ccccCCCCCeEEEEEecCCCCC
Q 043517 417 NSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSES 493 (956)
Q Consensus 417 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~ 493 (956)
.+++ +++..| |..+.....|.+|.|++...+ ++.+.+..++ ..||++..||.+..+.+++
T Consensus 357 ------v~~D--~~~L~A-~rAsr~en~DAID~A~v~~L~-----dPKeara~ikevhF~PFnPV~Krta~ty~d~d--- 419 (942)
T KOG0205|consen 357 ------VDKD--DVLLTA-ARASRKENQDAIDAAIVGMLA-----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPD--- 419 (942)
T ss_pred ------CChH--HHHHHH-HHHhhhcChhhHHHHHHHhhc-----CHHHHhhCceEEeeccCCccccceEEEEECCC---
Confidence 2222 222222 233355556679999998776 3455555555 7799999999999998877
Q ss_pred CCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhcc
Q 043517 494 DGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTEC 573 (956)
Q Consensus 494 ~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~ 573 (956)
++ .+..+|||||.|++.|.. +.+.++++.+.+++||+ +|+|-+++|++..++.. .+....
T Consensus 420 --G~-~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~~Ae--RGlRSLgVArq~v~e~~----~~~~g~ 479 (942)
T KOG0205|consen 420 --GN-WHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDKFAE--RGLRSLAVARQEVPEKT----KESPGG 479 (942)
T ss_pred --CC-EEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHHHHH--hcchhhhhhhhcccccc----ccCCCC
Confidence 45 678899999999999973 34568889999999999 99999999998765432 344566
Q ss_pred CcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhh-cC
Q 043517 574 GLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFR-SS 652 (956)
Q Consensus 574 ~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~-~~ 652 (956)
.+.|+|+.-+-||||.++.++|++.. ..|++|.|+|||...-++..++++|+ ..+. + .+-.+-|..-+ ++
T Consensus 480 pw~~~gllp~fdpprhdsa~tirral-~lGv~VkmitgdqlaI~keTgrrlgm--gtnm---y---pss~llG~~~~~~~ 550 (942)
T KOG0205|consen 480 PWEFVGLLPLFDPPRHDSAETIRRAL-NLGVNVKMITGDQLAIAKETGRRLGM--GTNM---Y---PSSALLGLGKDGSM 550 (942)
T ss_pred CcccccccccCCCCccchHHHHHHHH-hccceeeeecchHHHHHHhhhhhhcc--ccCc---C---CchhhccCCCCCCC
Confidence 79999999999999999999999999 99999999999999999999999998 3321 0 11112222211 22
Q ss_pred CHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCCh
Q 043517 653 SEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENF 732 (956)
Q Consensus 653 ~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~ 732 (956)
.....++++++..-|+.+.|+||.++|+.||++||.++|+|||+||+|+||.||+|||+. .++|.|+.++|+|++.+.+
T Consensus 551 ~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepgl 629 (942)
T KOG0205|consen 551 PGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 629 (942)
T ss_pred CCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCc
Confidence 334566677777789999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCccccccCccc
Q 043517 733 TTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQLPAH 812 (956)
Q Consensus 733 ~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~p~l 812 (956)
+-+..++..+|.+|++++.+..|.++..+-.+ +.|......+...|+|...+++.++.| -+.++++.++.
T Consensus 630 SviI~avltSraIfqrmknytiyavsitiriv-~gfml~alIw~~df~pfmvliiailnd-~t~mtis~d~v-------- 699 (942)
T KOG0205|consen 630 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIV-FGFMLIALIWEFDFSPFMVLIIAILND-GTIMTISKDRV-------- 699 (942)
T ss_pred hhhHHHHHHHHHHHHHHhhheeeeehhHHHHH-HHHHHHHHHHHhcCCHHHHHHHHHhcC-CceEEEEcccC--------
Confidence 99999999999999999999999988777544 333334444456777887777777666 45566666554
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 043517 813 ATAAASASPLANKTVWRNIILQVLYQVFVLSATQL 847 (956)
Q Consensus 813 y~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 847 (956)
+|.+.+.++..+.+|..-++.+.|+++....++|
T Consensus 700 -~psp~pdswkl~~ifatgvVlgtyma~~tvif~w 733 (942)
T KOG0205|consen 700 -KPSPTPDSWKLKEIFATGVVLGTYMAIMTVIFFW 733 (942)
T ss_pred -CCCCCCcccchhhhheeeeEehhHHHHHHHHHhh
Confidence 4444445555555554333344555555544443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-83 Score=754.93 Aligned_cols=531 Identities=18% Similarity=0.249 Sum_probs=435.6
Q ss_pred HHHhhHHHHHHHHHHHHHHHhccccC---C---CcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcC-Cc
Q 043517 93 DSIKDSTVILLLCCATLSLLLGIKRN---G---FEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRR-AA 165 (956)
Q Consensus 93 ~~~~~~~~~~ll~~~~ls~~~~~~~~---~---~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~-~~ 165 (956)
.|+++|+.++++++++++++++.... + ...+|...+++++.+++..+++.+++++.++++++| +...+ .+
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL---~~l~~~~~ 105 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSL---RGAKKDTF 105 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCCCe
Confidence 58899999999999999998874221 1 112344445555555556677778888888888888 34445 47
Q ss_pred EEEEECCE-EEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC----------CCCCe---EeeccEEeeeeE
Q 043517 166 VKVMRDGR-VRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD----------DKLPC---IFTGAKVVGGEC 231 (956)
Q Consensus 166 ~~V~Rdg~-~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~----------~~~~~---l~~Gt~v~~g~~ 231 (956)
++|+|||+ +++|++++|+|||+|.|++||+|||||++++|.. .||||. +.++. +|+||.|.+|.+
T Consensus 106 a~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~ 184 (679)
T PRK01122 106 ARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWI 184 (679)
T ss_pred EEEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeE
Confidence 99999988 8999999999999999999999999999999986 999999 22333 999999999999
Q ss_pred EEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 043517 232 SMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKG 311 (956)
Q Consensus 232 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~ 311 (956)
.++|+++|.+|.+||+.++++..+ .+++|+|..++.+...+..+.++.++..+.+ .++.+. .
T Consensus 185 ~i~Vta~g~~S~lgki~~lve~a~------~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~---~~~~g~------~--- 246 (679)
T PRK01122 185 VIRITANPGESFLDRMIALVEGAK------RQKTPNEIALTILLAGLTIIFLLVVATLPPF---AAYSGG------A--- 246 (679)
T ss_pred EEEEEEecccCHHHHHHHHHHhcc------ccCCHHHHHHHHHHHhhhHHHHHHHHHHHHH---HHHhCc------h---
Confidence 999999999999999999999888 7899999888887666654444333222222 122210 0
Q ss_pred CcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCccccccccccccccee
Q 043517 312 GVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVT 391 (956)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~ 391 (956)
..+..++++++++|||+ |+.+.++....+++||+|+|+++|+++++|++|++|
T Consensus 247 --------------------------~~l~~~iallV~aiP~a-lg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~ 299 (679)
T PRK01122 247 --------------------------LSITVLVALLVCLIPTT-IGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVD 299 (679)
T ss_pred --------------------------HHHHHHHHHHHHcccch-hhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCC
Confidence 45677899999999999 999999999999999999999999999999999999
Q ss_pred EEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhc-ccc
Q 043517 392 AICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMK-QNC 470 (956)
Q Consensus 392 ~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~-~~~ 470 (956)
++|||||||||+|+|++.+++..+.. ++ .+++..+ ++|+... .+|.++||+++++++.+.+....+ ...
T Consensus 300 ~I~~DKTGTLT~g~~~v~~~~~~~~~------~~--~~ll~~a-~~~s~~s-~hP~~~AIv~~a~~~~~~~~~~~~~~~~ 369 (679)
T PRK01122 300 TLLLDKTGTITLGNRQASEFLPVPGV------TE--EELADAA-QLSSLAD-ETPEGRSIVVLAKQRFNLRERDLQSLHA 369 (679)
T ss_pred EEEEeCCCCCcCCcEEEEEEEeCCCC------CH--HHHHHHH-HHhcCCC-CCchHHHHHHHHHhhcCCCchhhccccc
Confidence 99999999999999999999865432 11 2334434 3444333 248999999999822444322211 112
Q ss_pred cccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccce
Q 043517 471 TVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLR 550 (956)
Q Consensus 471 ~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~r 550 (956)
+.+||++.+|+|++.++ ++ .++||++|.+++.|.. +|. +.++++.+..+++++ +|+|
T Consensus 370 ~~~pF~s~~~~~gv~~~--------g~---~~~kGa~e~il~~~~~----~g~------~~~~~~~~~~~~~a~--~G~~ 426 (679)
T PRK01122 370 TFVPFSAQTRMSGVDLD--------GR---EIRKGAVDAIRRYVES----NGG------HFPAELDAAVDEVAR--KGGT 426 (679)
T ss_pred eeEeecCcCceEEEEEC--------CE---EEEECCHHHHHHHHHh----cCC------cChHHHHHHHHHHHh--CCCc
Confidence 27899999998888642 22 5799999999999963 122 123567778889999 9999
Q ss_pred eeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccC
Q 043517 551 CISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKP 630 (956)
Q Consensus 551 vl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~ 630 (956)
++++|+ |++++|+++++||+|||++++|++|| ++||+++|+||||+.||.++|+++|+ ++
T Consensus 427 ~l~va~-----------------~~~~lG~i~l~D~~R~~~~eai~~Lr-~~GI~vvMiTGDn~~TA~aIA~elGI--d~ 486 (679)
T PRK01122 427 PLVVAE-----------------DNRVLGVIYLKDIVKPGIKERFAELR-KMGIKTVMITGDNPLTAAAIAAEAGV--DD 486 (679)
T ss_pred EEEEEE-----------------CCeEEEEEEEeccCchhHHHHHHHHH-HCCCeEEEECCCCHHHHHHHHHHcCC--cE
Confidence 999997 78999999999999999999999999 99999999999999999999999999 65
Q ss_pred CCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 631 GAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 631 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
++||++||||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 487 -----------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 487 -----------------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred -----------------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 899999999999999999999999999999999999999999999
Q ss_pred eCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 043517 711 IGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNA 761 (956)
Q Consensus 711 mg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni 761 (956)
|| +|++.||++||+|++||||+.+++++++||+++-+--..-.|++..-+
T Consensus 532 Mg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 532 MN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred eC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 99 999999999999999999999999999999999776666778776433
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-81 Score=703.41 Aligned_cols=810 Identities=16% Similarity=0.166 Sum_probs=597.6
Q ss_pred HHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCC
Q 043517 40 IAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNG 119 (956)
Q Consensus 40 ~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~~~~~~ 119 (956)
....+..+ +|+. .+.+++...++||+|+.+ ...+.|.+++.++-..|++.++.++..+|..-.+
T Consensus 153 ~~g~~~k~--~G~~-~~~~i~~a~~~~G~N~fd---------i~vPtF~eLFkE~A~aPfFVFQVFcvgLWCLDey---- 216 (1160)
T KOG0209|consen 153 PFGYFQKS--TGHE-EESEIKLAKHKYGKNKFD---------IVVPTFSELFKEHAVAPFFVFQVFCVGLWCLDEY---- 216 (1160)
T ss_pred cchhhhhc--cCcc-hHHHHHHHHHHhcCCccc---------cCCccHHHHHHHhccCceeeHhHHhHHHHHhHHH----
Confidence 33344444 4776 347888888889999999 8889999999999999999999999999999887
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCC---CCcc
Q 043517 120 FEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQT---GDQV 196 (956)
Q Consensus 120 ~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~---G~~v 196 (956)
|++++..+++++ .+++-.-+++.+.+.++|. ....+..+.|+|+++|+.+.++||+|||+|.+.. ...|
T Consensus 217 ----WYySlFtLfMli---~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~v 288 (1160)
T KOG0209|consen 217 ----WYYSLFTLFMLI---AFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHV 288 (1160)
T ss_pred ----HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcC
Confidence 888876665544 4455555566677777744 3445778999999999999999999999999976 6789
Q ss_pred cccEEEEeeCCceecccC---------------------------CCCCeEeeccEEee-------------eeEEEEEE
Q 043517 197 PADGLFVHGKNLKLDDGD---------------------------DKLPCIFTGAKVVG-------------GECSMLVT 236 (956)
Q Consensus 197 PaD~~ll~g~~l~vdes~---------------------------~~~~~l~~Gt~v~~-------------g~~~~~V~ 236 (956)
|||.+|+.|++ .|||++ ++.+.+|+||++++ |-+.+.|+
T Consensus 289 PCDllLL~Gsc-iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~Vl 367 (1160)
T KOG0209|consen 289 PCDLLLLRGSC-IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVL 367 (1160)
T ss_pred CceEEEEecce-eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEE
Confidence 99999999999 999999 46789999999997 55899999
Q ss_pred EecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccc
Q 043517 237 SVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRST 316 (956)
Q Consensus 237 ~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (956)
+||++|..|++.|.+..+. ++-|.-.++. -+++.+.+++|++...+ -|.-+..++....+
T Consensus 368 rTGFeTSQGkLvRtilf~a------ervTaNn~Et----f~FILFLlVFAiaAa~Y---vwv~Gskd~~RsrY------- 427 (1160)
T KOG0209|consen 368 RTGFETSQGKLVRTILFSA------ERVTANNRET----FIFILFLLVFAIAAAGY---VWVEGSKDPTRSRY------- 427 (1160)
T ss_pred eccccccCCceeeeEEecc------eeeeeccHHH----HHHHHHHHHHHHHhhhe---EEEecccCcchhhh-------
Confidence 9999999999999999866 4545443332 23333333333332221 12222111101111
Q ss_pred hhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeC
Q 043517 317 VKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTG 396 (956)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~D 396 (956)
..++.++.+++..+|+. ||+-++++...+...|+|.+++|..|-.+.-+|++|+.|||
T Consensus 428 ---------------------KL~LeC~LIlTSVvPpE-LPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFD 485 (1160)
T KOG0209|consen 428 ---------------------KLFLECTLILTSVVPPE-LPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFD 485 (1160)
T ss_pred ---------------------heeeeeeEEEeccCCCC-CchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEec
Confidence 45567777888999999 99999999999999999999999999999999999999999
Q ss_pred ccccccCCceEEEEEEecCcc-ccc---CCCCHHHHHHHHHHHHhc--CCCCCCCCcHHHHHHHHHhhcCCChhh----h
Q 043517 397 KTSDLSLDHANMAELWIATDN-SFI---KSTSADVLDALREAIATT--SYDEAAVDDDDALLLWAKEFLDVDGDK----M 466 (956)
Q Consensus 397 KTGTLT~~~~~v~~i~~~~~~-~~~---~~~~~~~~~~l~~~~~~~--~~~~~~~p~e~Al~~~~~~~~~~~~~~----~ 466 (956)
||||||+..|.|.++.-.... ... .+.+.+..+.++.|.++- ...-..||.|+|.++...|. ....+ .
T Consensus 486 KTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~--~~k~~~v~p~ 563 (1160)
T KOG0209|consen 486 KTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWN--LEKKNSVCPR 563 (1160)
T ss_pred CCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcc--cccCcccCCC
Confidence 999999999999998763221 111 113334444443332221 11245679999999987532 21111 0
Q ss_pred c------ccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHH
Q 043517 467 K------QNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIR 540 (956)
Q Consensus 467 ~------~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~ 540 (956)
+ +-++.+.|+|..|||+|++......+. .+ +++.+|||||.|.++.. +.+.++.+.+.
T Consensus 564 ~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s-~k-~~~aVKGAPEvi~~ml~--------------dvP~dY~~iYk 627 (1160)
T KOG0209|consen 564 EGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSS-EK-YFVAVKGAPEVIQEMLR--------------DVPKDYDEIYK 627 (1160)
T ss_pred cCCCcccchhhhhhHHHHHHHHHhhhhcccCCCc-eE-EEEEecCCHHHHHHHHH--------------hCchhHHHHHH
Confidence 1 112288999999999999876643111 34 89999999999988764 45678999999
Q ss_pred HHhhccccceeeeeEEeeccc----cchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHH
Q 043517 541 DIEANHHSLRCISFACKRVEQ----QNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINI 616 (956)
Q Consensus 541 ~~~~~~~G~rvl~~A~k~~~~----~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~t 616 (956)
+|++ +|.||+|++||++.. +..+..|+..|+||+|.|++.|.-|+|+|++++|+.|+ +++++++|+||||+.|
T Consensus 628 ~ytR--~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~-~SSH~vvMITGDnpLT 704 (1160)
T KOG0209|consen 628 RYTR--QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELN-NSSHRVVMITGDNPLT 704 (1160)
T ss_pred HHhh--ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHh-ccCceEEEEeCCCccc
Confidence 9999 999999999999974 22345689999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHhcCCcccCCCCC--------------------------------CCCCCcceeeechhhhcCCH-HHHHhhhcc
Q 043517 617 ARLIAINSGLILKPGAED--------------------------------HSNGYDAAVIEASVFRSSSE-ETRSLMVDN 663 (956)
Q Consensus 617 a~~ia~~~Gi~~~~~~~~--------------------------------~~~~~~~~~i~g~~~~~~~~-~~~~~~~~~ 663 (956)
|.++|+++|| .+..... +..+.++.|++|+.++.+.. +.+.+++.+
T Consensus 705 AchVak~v~i-v~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~h 783 (1160)
T KOG0209|consen 705 ACHVAKEVGI-VEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPH 783 (1160)
T ss_pred hheehheeee-eccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhh
Confidence 9999999999 4431110 01124678999999997765 467889999
Q ss_pred ceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChH--------------------------
Q 043517 664 VRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQ-------------------------- 717 (956)
Q Consensus 664 ~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~-------------------------- 717 (956)
+.||||+.|.||..++..+++.|+.++|||||.||+.|||+||||||+-.+..+
T Consensus 784 v~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~ 863 (1160)
T KOG0209|consen 784 VWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANR 863 (1160)
T ss_pred eeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhh
Confidence 999999999999999999999999999999999999999999999997422210
Q ss_pred --------------------------------------------HHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHH
Q 043517 718 --------------------------------------------FARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFI 753 (956)
Q Consensus 718 --------------------------------------------~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~ 753 (956)
.|.-+|.+.....+.+++-+.|++||+++.+.-+.+
T Consensus 864 ~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMf 943 (1160)
T KOG0209|consen 864 QNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMF 943 (1160)
T ss_pred ccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHH
Confidence 012345555555678999999999999999877777
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCCCCCCcchHHHHHH
Q 043517 754 QLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAASASPLANKTVWRNI 831 (956)
Q Consensus 754 ~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~~l~~~~~~~~i 831 (956)
.... -|..... ..+..++.-..-|++.|...-.+++. ...+.++..+| .+.++ +| ..++++...+..+
T Consensus 944 KILA-LN~LisA-YslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLetLSke----RP---~~nIFN~Y~i~sv 1013 (1160)
T KOG0209|consen 944 KILA-LNCLISA-YSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKE----RP---LPNIFNVYIILSV 1013 (1160)
T ss_pred HHHH-HHHHHHH-HHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchhhHhhc----CC---CCCcchHHHHHHH
Confidence 6543 3332222 22345555567889999887776655 34566777788 56555 44 4578888888877
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhc----c----ccccccchhHHHHHHHHHHHHH-HHHHhhccccccccccCCCchhHHH
Q 043517 832 ILQVLYQVFVLSATQLKGNELLQ----V----QANKTDLKAIVFNSFVLCQVFV-LINAREIEALNIFEGKGLHQNPWFL 902 (956)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~t~~f~~l~~~~~~~-~~~~~~~~~~~~f~~~~~~~n~~~~ 902 (956)
+.|...+...++++.-....... . ...++..+|.+|..-...|+.+ +.|. .+.+|+ .++..|+.+.
T Consensus 1014 l~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY----~G~PF~-Esl~eNK~l~ 1088 (1160)
T KOG0209|consen 1014 LLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNY----QGRPFR-ESLRENKGLL 1088 (1160)
T ss_pred HHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhhhc----cCcchh-hhhhhccchH
Confidence 77766666555443221111111 1 0345667788777777677765 3443 356888 7999999988
Q ss_pred HHHHHHHHHHHHHHH----HHHhhccccCCChhhHHH----HHHHHHHHHHHHHHHhhc
Q 043517 903 VIVGFIFILDIAVIE----MVTVVTHGTRMDLKDWCV----CIGIAVMTLPTGLVAKCI 953 (956)
Q Consensus 903 ~~~~~~~~~~~~~~~----~~~~~f~~~~l~~~~~~~----~~~~~~~~~~~~~i~k~~ 953 (956)
.+++.+.++.+.... -++..|...+++-.+-.. +.+--++.++++.+.||+
T Consensus 1089 y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~ 1147 (1160)
T KOG0209|consen 1089 YGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFF 1147 (1160)
T ss_pred HHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777666555442 277788999888544322 333344456667777764
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-81 Score=691.68 Aligned_cols=785 Identities=19% Similarity=0.226 Sum_probs=604.9
Q ss_pred HHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHH
Q 043517 61 RRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCI 140 (956)
Q Consensus 61 ~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~~~~~~~~~~~~~~~~i~~~~l~~~~i 140 (956)
.++++|.+|++. |+|+..-..+...+++||+.+.|+++++.++.++...+.. |....|..++. +++.+..+-
T Consensus 74 ~~~~r~~pn~v~-----nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i-g~l~ty~~pl~--fvl~itl~k 145 (1051)
T KOG0210|consen 74 YRRRRFPPNEVR-----NQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI-GYLSTYWGPLG--FVLTITLIK 145 (1051)
T ss_pred cccccCCCchhh-----hcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee-cchhhhhHHHH--HHHHHHHHH
Confidence 567788899998 8889988899999999999999999999999988776522 22222322222 222333556
Q ss_pred HHHHHHHHHHHHHHhHhhhhhcCCcEEEE-ECCEEEEEEccccccCcEEEeCCCCcccccEEEEeeCC------ceeccc
Q 043517 141 SSLFRFVKNWINELLVSKRTSRRAAVKVM-RDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKN------LKLDDG 213 (956)
Q Consensus 141 ~~~~~~~~~~~~~~l~~~~~~~~~~~~V~-Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~------l~vdes 213 (956)
+++.++++.+..+.+ +.+..+++ |||.... |+++|++||+|+++.+++||||.++++++. +..|+-
T Consensus 146 eavdd~~r~~rd~~~------Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQL 218 (1051)
T KOG0210|consen 146 EAVDDLKRRRRDREL------NSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQL 218 (1051)
T ss_pred HHHHHHHHHHhhhhh------hhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEecccc
Confidence 666766665554443 34444444 6776655 999999999999999999999999998764 111111
Q ss_pred C-------------------------------------------------------CCCCeEeeccEEeeeeEEEEEEEe
Q 043517 214 D-------------------------------------------------------DKLPCIFTGAKVVGGECSMLVTSV 238 (956)
Q Consensus 214 ~-------------------------------------------------------~~~~~l~~Gt~v~~g~~~~~V~~t 238 (956)
. +-+|+++++|+|.+|.+.|+|++|
T Consensus 219 DGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYT 298 (1051)
T KOG0210|consen 219 DGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYT 298 (1051)
T ss_pred CCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEe
Confidence 1 236899999999999999999999
Q ss_pred cCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchh
Q 043517 239 GENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVK 318 (956)
Q Consensus 239 G~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (956)
|.+|.. +-+...++ .|...++.++|.+.+.++.+++++++++.... .+ ...|+
T Consensus 299 G~dtRs---vMNts~pr------~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~---g~-------~~~wy-------- 351 (1051)
T KOG0210|consen 299 GRDTRS---VMNTSRPR------SKVGLLELEINGLTKILFCFVLVLSIVMVAMK---GF-------GSDWY-------- 351 (1051)
T ss_pred cccHHH---HhccCCcc------cccceeeeecccHHHHHHHHHHHHHHHHHHhh---cC-------CCchH--------
Confidence 999943 33334444 67778899999999999999998888765541 11 23454
Q ss_pred hhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccC----CcccccccccccccceeEEe
Q 043517 319 EIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCF----RATARNLPVCSSLGLVTAIC 394 (956)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~----~ilvk~~~~~e~lg~v~~i~ 394 (956)
..+++.+.++...+|.+ |-+-+.++...-.....++ |..+|+....|+||++.++.
T Consensus 352 -------------------i~~~RfllLFS~IIPIS-LRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylL 411 (1051)
T KOG0210|consen 352 -------------------IYIIRFLLLFSSIIPIS-LRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLL 411 (1051)
T ss_pred -------------------HHHHHHHHHHhhhceeE-EEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEE
Confidence 77889999999999999 9999999988877777653 57899999999999999999
Q ss_pred eCccccccCCceEEEEEEecCcccccCC-----------------------------CCHHHHHHHHHHHHhcCCCCCC-
Q 043517 395 TGKTSDLSLDHANMAELWIATDNSFIKS-----------------------------TSADVLDALREAIATTSYDEAA- 444 (956)
Q Consensus 395 ~DKTGTLT~~~~~v~~i~~~~~~~~~~~-----------------------------~~~~~~~~l~~~~~~~~~~~~~- 444 (956)
+|||||||+|+|.+++++.+.-.|..+. .+.. .+-+..|+++||+..+.
T Consensus 412 tDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~r-v~~~V~alalCHNVTPv~ 490 (1051)
T KOG0210|consen 412 TDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSAR-VRNAVLALALCHNVTPVF 490 (1051)
T ss_pred ecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHH-HHHHHHHHHHhccCCccc
Confidence 9999999999999999998765443210 1222 23456788999997643
Q ss_pred -----------CCcHHHHHHHHHhhcCCChhhhc-------------cccc---ccccCCCCCeEEEEEecCCCCCCCCc
Q 043517 445 -----------VDDDDALLLWAKEFLDVDGDKMK-------------QNCT---VEAFNISKNRAGLLLKWNGSESDGDN 497 (956)
Q Consensus 445 -----------~p~e~Al~~~~~~~~~~~~~~~~-------------~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~ 497 (956)
.|+|.||+++.+ ..|+..-... .+|+ .|||+|+.|||+++++++.. ++
T Consensus 491 e~~ge~sYQAaSPDEVAiVkwTe-~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~----~e 565 (1051)
T KOG0210|consen 491 EDDGEVSYQAASPDEVAIVKWTE-TVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETT----EE 565 (1051)
T ss_pred CCCceEEeecCCCCeEEEEEeee-ecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCC----ce
Confidence 289999999988 7776432211 1233 89999999999999998866 67
Q ss_pred eEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHH----------
Q 043517 498 SVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEI---------- 567 (956)
Q Consensus 498 ~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~---------- 567 (956)
+..|.|||+-+|..... ..+++++...++|+ +|+|++++|.|.++.++++.+
T Consensus 566 -vtfylKGAD~VMs~iVq---------------~NdWleEE~gNMAR--EGLRtLVvakK~Ls~~eye~Fe~~y~~A~lS 627 (1051)
T KOG0210|consen 566 -VTFYLKGADVVMSGIVQ---------------YNDWLEEECGNMAR--EGLRTLVVAKKVLSEEEYEAFEEAYNAAKLS 627 (1051)
T ss_pred -EEEEEecchHHHhcccc---------------cchhhhhhhhhhhh--hcceEEEEEecccCHHHHHHHHHHHHhhhCc
Confidence 99999999998865443 23477888999999 999999999999988775432
Q ss_pred ------------HhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCC
Q 043517 568 ------------IELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDH 635 (956)
Q Consensus 568 ------------~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~ 635 (956)
...+|.|+.++|+.|.||+++++++.+++-|| +||||+||+|||..+||..+|+..++ +..++..|
T Consensus 628 i~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLR-NAgikiWMLTGDKlETA~ciAkSs~L-~sR~q~ih 705 (1051)
T KOG0210|consen 628 ISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLR-NAGIKIWMLTGDKLETAICIAKSSRL-FSRGQYIH 705 (1051)
T ss_pred cchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHh-hcCcEEEEEcCcchhheeeeehhccc-eecCceEE
Confidence 23679999999999999999999999999999 99999999999999999999999999 77655432
Q ss_pred C-------------------CCCcceeeechhhhc---CCHHHHHhhhccce--EEEecChhhHHHHHHHHHhc-CCeEE
Q 043517 636 S-------------------NGYDAAVIEASVFRS---SSEETRSLMVDNVR--VMANASPLDKLLMVQCLKQK-GEVVA 690 (956)
Q Consensus 636 ~-------------------~~~~~~~i~g~~~~~---~~~~~~~~~~~~~~--v~ar~~p~~K~~iv~~lq~~-g~~v~ 690 (956)
. ..+.+++++|+.++- .-++|+.++...+. |+|||+|+||+++++.+|++ |..|+
T Consensus 706 v~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc 785 (1051)
T KOG0210|consen 706 VIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVC 785 (1051)
T ss_pred EEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEE
Confidence 1 235788999988863 34577777666554 99999999999999999987 89999
Q ss_pred EEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043517 691 VTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAAN-LKWGRCVCNNIRKFIQLHLTVNAAAFAVNLV 769 (956)
Q Consensus 691 ~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~-i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~ 769 (956)
++|||.||+.|+++||+||.+-.+...+|.-+||+.+. .|+.+.++ +-+||..|+|..+.-+|.+-.+++...++.+
T Consensus 786 ~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qav 863 (1051)
T KOG0210|consen 786 AIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAV 863 (1051)
T ss_pred EEcCCCccchheeecccceeeecccccccchhccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 99999999999999999998644666688899999999 99999999 4569999999999999999999988888877
Q ss_pred HHHhcCCCCchHH---HHHHHHhhhhHHhHHhhccCcc----ccccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q 043517 770 AAIFCGEIPLEPF---QLLWVNLIMDVLGALALAAPVS----LRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVL 842 (956)
Q Consensus 770 ~~~~~~~~pl~~~---q~l~~~~~~~~~~~l~l~~~~~----~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~ 842 (956)
+.....+.|..-. .+..+..+.+++|.+++..++. ..+..|+||+.-..+..+--+.++.|.++ ++||+.+.
T Consensus 864 fs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLI-SiYQG~vi 942 (1051)
T KOG0210|consen 864 FSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLI-SIYQGSVI 942 (1051)
T ss_pred HHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhH-HHHcccHH
Confidence 7766555555444 4666778889999999999988 67778999999888887777777777664 78888777
Q ss_pred HHHHHhhhhhhccccccccchhHHHHHHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHHHHHHhh
Q 043517 843 SATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVV 922 (956)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 922 (956)
++..+... . .+.-..-++.|.++++..+........ -| +|.++++-+++++++++.++++..+
T Consensus 943 m~g~~~l~---~--~ef~~ivaisFtaLi~tELiMVaLtv~-----tw-------~~~m~vae~lsL~~Yivsl~~l~~y 1005 (1051)
T KOG0210|consen 943 MYGALLLF---D--TEFIHIVAISFTALILTELIMVALTVR-----TW-------HWLMVVAELLSLALYIVSLAFLHEY 1005 (1051)
T ss_pred HHHHHHHh---h--hhheEeeeeeeHHHHHHHHHHHhhhhh-----hh-------hHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 65432211 1 123344677888888877654222111 12 3667777888889988888888887
Q ss_pred ccccC-CChhhHHHHHHHHHHHHHHHHHHhhc
Q 043517 923 THGTR-MDLKDWCVCIGIAVMTLPTGLVAKCI 953 (956)
Q Consensus 923 f~~~~-l~~~~~~~~~~~~~~~~~~~~i~k~~ 953 (956)
|.... +++.+++.+.++.++++++.++.|.+
T Consensus 1006 fd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~l 1037 (1051)
T KOG0210|consen 1006 FDRYFILTYVFLWKVTVITLVSCLPLYFIKAL 1037 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77544 45556565666666666666666643
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-79 Score=721.42 Aligned_cols=532 Identities=17% Similarity=0.263 Sum_probs=436.2
Q ss_pred HHHhhHHHHHHHHHHHHHHHhcccc--C---CCcccchhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCC
Q 043517 93 DSIKDSTVILLLCCATLSLLLGIKR--N---GFEQGILDG---AMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRA 164 (956)
Q Consensus 93 ~~~~~~~~~~ll~~~~ls~~~~~~~--~---~~~~~~~~~---~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~ 164 (956)
.||++|+.++++++++++++++..+ . +....|++. +++++.+++..+++++.+++.++++++| +...+.
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L---~~~~~~ 104 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSL---KGTKKT 104 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCC
Confidence 5789999999999999999886521 1 122347764 3344445566778888999999999998 344444
Q ss_pred -cEEEEE-CCEEEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC----------CCCC---eEeeccEEeee
Q 043517 165 -AVKVMR-DGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD----------DKLP---CIFTGAKVVGG 229 (956)
Q Consensus 165 -~~~V~R-dg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~----------~~~~---~l~~Gt~v~~g 229 (956)
.++|+| ||++++|++++|+|||+|.|++||+|||||++++|+. .||||. +.++ .+|+||.|.+|
T Consensus 105 ~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G 183 (675)
T TIGR01497 105 TFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSD 183 (675)
T ss_pred ceEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCCceeecCCCCcceeecCcEEEee
Confidence 588886 8999999999999999999999999999999999975 999999 2233 39999999999
Q ss_pred eEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 043517 230 ECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEP 309 (956)
Q Consensus 230 ~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~ 309 (956)
.+.++|+++|.+|.+||+.++++.++ .+++|+|..++.+...+..+.++.+ +.++.... +.. .
T Consensus 184 ~~~i~Vt~~g~~S~lgri~~lve~a~------~~ktplq~~l~~l~~~l~~v~li~~---~~~~~~~~-~~~-----~-- 246 (675)
T TIGR01497 184 WLVVECTANPGETFLDRMIALVEGAQ------RRKTPNEIALTILLIALTLVFLLVT---ATLWPFAA-YGG-----N-- 246 (675)
T ss_pred EEEEEEEEecccCHHHHHHHHHHhcc------cCCChHHHHHHHHHHHHHHHHHHHH---HHHHHHHH-hcC-----h--
Confidence 99999999999999999999999888 7889999888877655543333222 22221111 110 0
Q ss_pred CCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccc
Q 043517 310 KGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGL 389 (956)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~ 389 (956)
. ..+..++++++++|||+ |+...+.....+++||+|+|+++|+++++|++|+
T Consensus 247 -----------~----------------~~~~~lvallV~aiP~a-Lg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~ 298 (675)
T TIGR01497 247 -----------A----------------ISVTVLVALLVCLIPTT-IGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGD 298 (675)
T ss_pred -----------h----------------HHHHHHHHHHHHhCchh-hhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhC
Confidence 0 34667789999999999 8888888778899999999999999999999999
Q ss_pred eeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhcc-
Q 043517 390 VTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQ- 468 (956)
Q Consensus 390 v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~- 468 (956)
+|++|||||||||+|+|++.+++..+.. + ..+++..+..++... .+|.++|++++++ +.|.+......
T Consensus 299 v~~I~~DKTGTLT~g~~~v~~~~~~~~~------~--~~~ll~~aa~~~~~s--~hP~a~Aiv~~a~-~~~~~~~~~~~~ 367 (675)
T TIGR01497 299 VDTLLLDKTGTITLGNRLASEFIPAQGV------D--EKTLADAAQLASLAD--DTPEGKSIVILAK-QLGIREDDVQSL 367 (675)
T ss_pred CCEEEECCCCcccCCCeEEEEEEecCCC------c--HHHHHHHHHHhcCCC--CCcHHHHHHHHHH-HcCCCccccccc
Confidence 9999999999999999999999864321 1 123344444333333 3489999999998 66665432211
Q ss_pred cccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhcccc
Q 043517 469 NCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHS 548 (956)
Q Consensus 469 ~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G 548 (956)
..+..||++.+++|++.+. + ++ .++||+||.+++.|.. +|.. .++++.+.++++++ +|
T Consensus 368 ~~~~~pf~~~~~~sg~~~~--~-----g~---~~~kGa~e~i~~~~~~----~g~~------~~~~~~~~~~~~a~--~G 425 (675)
T TIGR01497 368 HATFVEFTAQTRMSGINLD--N-----GR---MIRKGAVDAIKRHVEA----NGGH------IPTDLDQAVDQVAR--QG 425 (675)
T ss_pred cceEEEEcCCCcEEEEEEe--C-----Ce---EEEECCHHHHHHHHHh----cCCC------CcHHHHHHHHHHHh--CC
Confidence 1227899999888877543 2 22 5799999999998852 2221 12457778889999 99
Q ss_pred ceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcc
Q 043517 549 LRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLIL 628 (956)
Q Consensus 549 ~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~ 628 (956)
.|++++|+ +.+++|+++++||+|||++++|++|+ ++|++++|+|||+..+|.++|+++|+
T Consensus 426 ~r~l~va~-----------------~~~~lG~i~l~D~~Rp~a~eaI~~l~-~~Gi~v~miTGD~~~ta~~iA~~lGI-- 485 (675)
T TIGR01497 426 GTPLVVCE-----------------DNRIYGVIYLKDIVKGGIKERFAQLR-KMGIKTIMITGDNRLTAAAIAAEAGV-- 485 (675)
T ss_pred CeEEEEEE-----------------CCEEEEEEEecccchhHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHcCC--
Confidence 99999997 57999999999999999999999999 99999999999999999999999999
Q ss_pred cCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc
Q 043517 629 KPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 629 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG 708 (956)
++ +++|++|++|.++++.+|++|+.|+|+|||.||+|||++||+|
T Consensus 486 ~~-----------------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvG 530 (675)
T TIGR01497 486 DD-----------------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVG 530 (675)
T ss_pred CE-----------------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEe
Confidence 65 8999999999999999999999999999999999999999999
Q ss_pred EEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 043517 709 VSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAA 762 (956)
Q Consensus 709 Iamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~ 762 (956)
|||| +|++.++++||++++|+|++.+++++++||+++-+......|+++.++.
T Consensus 531 iAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 531 VAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred EEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 9999 9999999999999999999999999999999999999999999887664
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-77 Score=704.66 Aligned_cols=498 Identities=20% Similarity=0.277 Sum_probs=424.1
Q ss_pred chhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEE-CCEEEEEEccccccCcEEEeCCCCcccccEE
Q 043517 124 ILDGAMVF-VVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMR-DGRVRQIAVSEVVVGDVVCLQTGDQVPADGL 201 (956)
Q Consensus 124 ~~~~~~i~-~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~R-dg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ 201 (956)
|++...++ +++++.-.++....-+..+++++| ....|..+++++ ||++++||.++|+|||+|.|+|||+||+||+
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L---~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~ 249 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRAL---LDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGV 249 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeE
Confidence 34444333 333333455555444555555555 567899997777 5669999999999999999999999999999
Q ss_pred EEeeCCceecccC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHH
Q 043517 202 FVHGKNLKLDDGD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISV 271 (956)
Q Consensus 202 ll~g~~l~vdes~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~ 271 (956)
+++|++ .||||+ ..++.+++||.+.+|.....|+++|.+|.+++|.+++++++ .+|+|.|+..
T Consensus 250 V~~G~s-~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq------~~Ka~iqrla 322 (713)
T COG2217 250 VVSGSS-SVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQ------SSKAPIQRLA 322 (713)
T ss_pred EEeCcE-EeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHh------hCCchHHHHH
Confidence 999999 999999 56899999999999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHc
Q 043517 272 DRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVS 351 (956)
Q Consensus 272 ~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~i 351 (956)
||++.++++.++++++++|++|. +++ ..+| . ..+.+++++++++|
T Consensus 323 Dr~a~~fvp~vl~ia~l~f~~w~---~~~-----~~~~-----------~----------------~a~~~a~avLVIaC 367 (713)
T COG2217 323 DRVASYFVPVVLVIAALTFALWP---LFG-----GGDW-----------E----------------TALYRALAVLVIAC 367 (713)
T ss_pred HHHHHccHHHHHHHHHHHHHHHH---Hhc-----CCcH-----------H----------------HHHHHHHhheeeeC
Confidence 99999999999999999998752 332 1222 2 78899999999999
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHH
Q 043517 352 RDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDAL 431 (956)
Q Consensus 352 P~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l 431 (956)
||+ |.+++|+++..++.+.+|+|+++|+..++|.++++|+++||||||||+|+++|+++...+. +..++|
T Consensus 368 PCA-LgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~---------~e~~~L 437 (713)
T COG2217 368 PCA-LGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG---------DEDELL 437 (713)
T ss_pred ccH-HHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC---------CHHHHH
Confidence 999 9999999999999999999999999999999999999999999999999999999998654 124678
Q ss_pred HHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHH
Q 043517 432 REAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIIL 511 (956)
Q Consensus 432 ~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il 511 (956)
..+++++..++| |+.+||+++++ ..+.... -+|.... ..++..+..+ .. + ..|+++.+.
T Consensus 438 ~laAalE~~S~H--PiA~AIv~~a~-~~~~~~~--------~~~~~i~-G~Gv~~~v~g-----~~-v---~vG~~~~~~ 496 (713)
T COG2217 438 ALAAALEQHSEH--PLAKAIVKAAA-ERGLPDV--------EDFEEIP-GRGVEAEVDG-----ER-V---LVGNARLLG 496 (713)
T ss_pred HHHHHHHhcCCC--hHHHHHHHHHH-hcCCCCc--------cceeeec-cCcEEEEECC-----EE-E---EEcCHHHHh
Confidence 888899988887 99999999888 5542111 1133222 2344433322 22 4 449999885
Q ss_pred HhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHH
Q 043517 512 SMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEV 591 (956)
Q Consensus 512 ~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~ 591 (956)
+.-. ..+ . ..+..+.+.. +|..++.++. |.+++|+++++|++|+++
T Consensus 497 ~~~~----------~~~----~-~~~~~~~~~~--~G~t~v~va~-----------------dg~~~g~i~~~D~~R~~a 542 (713)
T COG2217 497 EEGI----------DLP----L-LSERIEALES--EGKTVVFVAV-----------------DGKLVGVIALADELRPDA 542 (713)
T ss_pred hcCC----------Ccc----c-hhhhHHHHHh--cCCeEEEEEE-----------------CCEEEEEEEEeCCCChhH
Confidence 4211 011 1 3455666777 9999898987 779999999999999999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecC
Q 043517 592 KQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANAS 671 (956)
Q Consensus 592 ~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~ 671 (956)
+++|++|| +.|++++|+||||..+|.++|+++|| ++ +++.+.
T Consensus 543 ~~aI~~L~-~~Gi~~~mLTGDn~~~A~~iA~~lGI--d~-----------------------------------v~Aell 584 (713)
T COG2217 543 KEAIAALK-ALGIKVVMLTGDNRRTAEAIAKELGI--DE-----------------------------------VRAELL 584 (713)
T ss_pred HHHHHHHH-HCCCeEEEEcCCCHHHHHHHHHHcCh--Hh-----------------------------------heccCC
Confidence 99999999 99999999999999999999999999 76 999999
Q ss_pred hhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHH
Q 043517 672 PLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRK 751 (956)
Q Consensus 672 p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~ 751 (956)
|++|.++|+.+|++|++|+|+|||+||+|||.+|||||||| .|+|+|+++||+++++|++..++++++.+|+++++|++
T Consensus 585 PedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~Ikq 663 (713)
T COG2217 585 PEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQ 663 (713)
T ss_pred cHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 043517 752 FIQLHLTVNAAAFAVNLVA 770 (956)
Q Consensus 752 ~~~~~l~~ni~~~~~~~~~ 770 (956)
|+.|++.||++.+.+++.+
T Consensus 664 Nl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 664 NLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888766
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-80 Score=743.47 Aligned_cols=818 Identities=17% Similarity=0.187 Sum_probs=606.0
Q ss_pred HHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHH
Q 043517 62 RRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCIS 141 (956)
Q Consensus 62 r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~~~~~~~~~~~~~~~~i~~~~l~~~~i~ 141 (956)
+...|-.|.+. ++|++....+.+.+++||+++.|+++++.+++++++ .++.++ |...+.+++++.+..+.+
T Consensus 28 ~~~~~~~N~i~-----TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~---~~~~~pl~~vl~~t~iKd 98 (1151)
T KOG0206|consen 28 PQRKYCDNRIS-----TTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNP---YTTLVPLLFVLGITAIKD 98 (1151)
T ss_pred hhccccCCeeE-----EEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCc---cceeeceeeeehHHHHHH
Confidence 55589999999 788888889999999999999999999999999998 432221 334444445555567888
Q ss_pred HHHHHHHHHHHHHhHhhhhhcCCcEEEEECCE-EEEEEccccccCcEEEeCCCCcccccEEEEeeCC-------------
Q 043517 142 SLFRFVKNWINELLVSKRTSRRAAVKVMRDGR-VRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKN------------- 207 (956)
Q Consensus 142 ~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~-~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~------------- 207 (956)
++++|+++++..++ +..++.|.|++. +++..|++|++||+|.+..++.+|||.+|++++.
T Consensus 99 ~~eD~rR~~~D~~i------N~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLD 172 (1151)
T KOG0206|consen 99 AIEDYRRHKQDKEV------NNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLD 172 (1151)
T ss_pred HHhhhhhhhccHHh------hcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecC
Confidence 88888888875555 678899999644 8999999999999999999999999999998763
Q ss_pred ----ceecccC--------------------------------------------CCCCeEeeccEEeeee-EEEEEEEe
Q 043517 208 ----LKLDDGD--------------------------------------------DKLPCIFTGAKVVGGE-CSMLVTSV 238 (956)
Q Consensus 208 ----l~vdes~--------------------------------------------~~~~~l~~Gt~v~~g~-~~~~V~~t 238 (956)
|++.++. ..+++++.|+++.+.+ ++++|+.|
T Consensus 173 GEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~t 252 (1151)
T KOG0206|consen 173 GETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFT 252 (1151)
T ss_pred CccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEc
Confidence 1111111 2246789999999987 78999999
Q ss_pred cCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC-CCCCCCcccch
Q 043517 239 GENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHD-PEPKGGVRSTV 317 (956)
Q Consensus 239 G~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 317 (956)
|.+|. ++++..+++ .+++++++.+++....+..+.+.++++..+.... |. ....... ..|+.......
T Consensus 253 G~dtK---~~~n~~~~~------~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~-~~-~~~~~~~~~~~~~~~~~~~ 321 (1151)
T KOG0206|consen 253 GHDTK---LMQNSGKPP------SKRSRIERKMNKIIILLFVLLILMCLISAIGFAI-WT-RQDGRHNGEWWYLSPSEAA 321 (1151)
T ss_pred CCcch---HHHhcCCCc------cccchhhhhhhhhHHHHHHHHHHHHHHHHhhhhe-ee-eecccccCchhhhcCchHH
Confidence 99994 455555566 8999999999999888887777776665554211 11 1111111 12221100000
Q ss_pred hhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHH------hhcc----cCCcccccccccccc
Q 043517 318 KEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYAS------KKLP----CFRATARNLPVCSSL 387 (956)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~------~~l~----~~~ilvk~~~~~e~l 387 (956)
...+ ..+..++.++...+|.+ |.+.+.+.-...+ ..|. ...+.+|+.+..|+|
T Consensus 322 ~~~~----------------~~f~t~~il~~~liPIS-LyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeL 384 (1151)
T KOG0206|consen 322 YAGF----------------VHFLTFIILYQYLIPIS-LYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEEL 384 (1151)
T ss_pred HHHH----------------HHHHHHHhhhhceEEEE-EEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhh
Confidence 0111 56677888888999988 7765555444433 2232 456899999999999
Q ss_pred cceeEEeeCccccccCCceEEEEEEecCcccccC----------------------C----------------CCHHHHH
Q 043517 388 GLVTAICTGKTSDLSLDHANMAELWIATDNSFIK----------------------S----------------TSADVLD 429 (956)
Q Consensus 388 g~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~----------------------~----------------~~~~~~~ 429 (956)
|+|++|++|||||||+|.|++.+|.+.+..|... . ......+
T Consensus 385 Gqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 464 (1151)
T KOG0206|consen 385 GQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDIL 464 (1151)
T ss_pred cceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHH
Confidence 9999999999999999999999999988766431 0 0122334
Q ss_pred HHHHHHHhcCCCCCCC-------------CcHHHHHHHHHhhcCCChhhhc------------cccc---ccccCCCCCe
Q 043517 430 ALREAIATTSYDEAAV-------------DDDDALLLWAKEFLDVDGDKMK------------QNCT---VEAFNISKNR 481 (956)
Q Consensus 430 ~l~~~~~~~~~~~~~~-------------p~e~Al~~~~~~~~~~~~~~~~------------~~~~---~~~F~s~~k~ 481 (956)
.+..++++||+..+.. |+|.|+++.|+ .+|....... ..|+ ..||+|.|||
T Consensus 465 ~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr-~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKR 543 (1151)
T KOG0206|consen 465 EFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAAR-ELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKR 543 (1151)
T ss_pred HHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHH-hcCceeeeccCceEEEeccccceeEEEEEEeccccccce
Confidence 5677889999876432 79999999999 8887543211 2233 8899999999
Q ss_pred EEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccc
Q 043517 482 AGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQ 561 (956)
Q Consensus 482 ~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~ 561 (956)
|||+++.++ ++ +.+|||||+.+|.+++... ....++...+++++||. +|+|++++|||++++
T Consensus 544 MSVIVR~p~-----g~-i~LycKGADsvI~erL~~~----------~~~~~e~T~~Hl~~yA~--eGLRTLc~A~r~l~e 605 (1151)
T KOG0206|consen 544 MSVIVRDPD-----GR-ILLYCKGADSVIFERLSKN----------GEKLREKTQEHLEEYAT--EGLRTLCLAYRELDE 605 (1151)
T ss_pred eEEEEEcCC-----Cc-EEEEEcCcchhhHhhhhhc----------chHHHHHHHHHHHHHHh--hhhhHhhhhhhccCH
Confidence 999999988 56 9999999999999999751 23567778889999999 999999999999998
Q ss_pred cchHHH---------------------HhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHH
Q 043517 562 QNEEEI---------------------IELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLI 620 (956)
Q Consensus 562 ~~~~~~---------------------~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~i 620 (956)
++++.| .+.+|+||+++|..++||+++++++++|+.|+ +||||+||+|||..+||.+|
T Consensus 606 ~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~-~AGIKIWVLTGDK~ETAiNI 684 (1151)
T KOG0206|consen 606 EEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLA-QAGIKIWVLTGDKQETAINI 684 (1151)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHH-HcCCEEEEEcCcHHHHHHHH
Confidence 887554 45689999999999999999999999999999 99999999999999999999
Q ss_pred HHhcCCcccCCCCCC--------------------------------------CCCCcceeeechhhhcCCHH----HHH
Q 043517 621 AINSGLILKPGAEDH--------------------------------------SNGYDAAVIEASVFRSSSEE----TRS 658 (956)
Q Consensus 621 a~~~Gi~~~~~~~~~--------------------------------------~~~~~~~~i~g~~~~~~~~~----~~~ 658 (956)
|..|++ ++++.... .....+++++|+.+....++ .+.
T Consensus 685 g~sC~L-l~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl 763 (1151)
T KOG0206|consen 685 GYSCRL-LRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFL 763 (1151)
T ss_pred HHhhcC-CCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHH
Confidence 999999 66643310 00146889999998754433 344
Q ss_pred hhhccce--EEEecChhhHHHHHHHHHhc-CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHH
Q 043517 659 LMVDNVR--VMANASPLDKLLMVQCLKQK-GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTI 735 (956)
Q Consensus 659 ~~~~~~~--v~ar~~p~~K~~iv~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i 735 (956)
++...++ ++||++|-||..+|+..++. +.++++||||+||.+|++.|||||.++..+--+|..+||+.+. .|.-+
T Consensus 764 ~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL 841 (1151)
T KOG0206|consen 764 ELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFL 841 (1151)
T ss_pred HHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHH--HHHHH
Confidence 4444444 99999999999999999744 8899999999999999999999999876666788899999999 89999
Q ss_pred HHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CchHHHHHHHHhhhhHHhHHhhc-cCcc----cc
Q 043517 736 AAN-LKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEI---PLEPFQLLWVNLIMDVLGALALA-APVS----LR 806 (956)
Q Consensus 736 ~~~-i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~---pl~~~q~l~~~~~~~~~~~l~l~-~~~~----~~ 806 (956)
.++ +.|||..|.|+.+++.|.+++|+...+..+++.++++++ .+.++++.++|++++.+|.+.+| +|++ .+
T Consensus 842 ~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~ 921 (1151)
T KOG0206|consen 842 ERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETL 921 (1151)
T ss_pred hhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHH
Confidence 998 789999999999999999999999999999999988755 88999999999999999999997 6666 78
Q ss_pred ccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccccchhHHHHHHHHHHHHHHHHHhhccc
Q 043517 807 VQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLINAREIEA 886 (956)
Q Consensus 807 ~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~~~~~~~~~~~~~~ 886 (956)
|+.|+||++...+..+.-+.+|.+++ .++++++++|++.+..........+.....-..|...+++.+....+.+....
T Consensus 922 l~~P~LY~~g~~~~~f~~~~f~~~~~-~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~ 1000 (1151)
T KOG0206|consen 922 LRFPELYQRGQLNLLFNWKRFWGWML-DGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALE 1000 (1151)
T ss_pred hhCCcchhhhhhccccchHHHHHHHH-HHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeee
Confidence 88899999977666555555555554 78888887775544322110111011111222222222222221222221112
Q ss_pred cccccccCCCchhHHHHHHHHHHHHHHHHHHHHHh----hc---------cccCCChhhHHHHHHHHHHHHHHHHHHhhc
Q 043517 887 LNIFEGKGLHQNPWFLVIVGFIFILDIAVIEMVTV----VT---------HGTRMDLKDWCVCIGIAVMTLPTGLVAKCI 953 (956)
Q Consensus 887 ~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~----~f---------~~~~l~~~~~~~~~~~~~~~~~~~~i~k~~ 953 (956)
.+.|. |-|++++++ ++++.+++..+.+. +. ...--++.+|+.+++..+..++++.++|.+
T Consensus 1001 ~~ywT----~i~~i~i~g---Si~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l 1073 (1151)
T KOG0206|consen 1001 TSYWT----WINHIVIWG---SILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSL 1073 (1151)
T ss_pred ehhee----HHHHHHHHH---HHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHH
Confidence 33344 334544444 33333333322221 11 111135778999999999999999888865
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-73 Score=692.26 Aligned_cols=523 Identities=21% Similarity=0.248 Sum_probs=439.0
Q ss_pred hHHHHHHHHHhh--H--HHHHHHHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhh
Q 043517 86 HFGRLISDSIKD--S--TVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTS 161 (956)
Q Consensus 86 s~~~~l~~~~~~--~--~~~~ll~~~~ls~~~~~~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~ 161 (956)
+|++..|+.+++ + +..+..++++.+++++. |.++..+++++++...++.+.+.+.++.+++| ...
T Consensus 172 ~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~~--------~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L---~~l 240 (741)
T PRK11033 172 PIARKALRLIRSGSPFAIETLMSVAAIGALFIGA--------TAEAAMVLLLFLIGERLEGYAASRARRGVSAL---MAL 240 (741)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHcc--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhC
Confidence 344444454443 2 23334444455555543 67777777777777788888888888888888 567
Q ss_pred cCCcEEEEECCEEEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC----------CCCCeEeeccEEeeeeE
Q 043517 162 RRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD----------DKLPCIFTGAKVVGGEC 231 (956)
Q Consensus 162 ~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~----------~~~~~l~~Gt~v~~g~~ 231 (956)
.|.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|+. .||||. ..++.+|+||.+.+|.+
T Consensus 241 ~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~-~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~ 319 (741)
T PRK11033 241 VPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERATGEKVPAGATSVDRLV 319 (741)
T ss_pred CCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE-EeecccccCCCCCEecCCCCeeccCCEEcCceE
Confidence 8899999999999999999999999999999999999999999987 999999 45899999999999999
Q ss_pred EEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 043517 232 SMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKG 311 (956)
Q Consensus 232 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~ 311 (956)
+++|+++|.+|.+|||.+++++.+ .+++|+|+.++++++++.+++++++++++++|.. +++ .+|
T Consensus 320 ~i~V~~~g~~s~l~~I~~lv~~a~------~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~--~~~------~~~-- 383 (741)
T PRK11033 320 TLEVLSEPGASAIDRILHLIEEAE------ERRAPIERFIDRFSRIYTPAIMLVALLVILVPPL--LFA------APW-- 383 (741)
T ss_pred EEEEEeccccCHHHHHHHHHHHhh------ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hcc------CCH--
Confidence 999999999999999999999888 7899999999999999999999999999888622 111 122
Q ss_pred CcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCccccccccccccccee
Q 043517 312 GVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVT 391 (956)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~ 391 (956)
. ..+.+++++++++|||+ |.+++|+++..+..+++|+|+++|+.+++|+|+++|
T Consensus 384 ---------~----------------~~i~~a~svlviacPca-L~latP~a~~~~l~~aar~gilik~~~alE~l~~v~ 437 (741)
T PRK11033 384 ---------Q----------------EWIYRGLTLLLIGCPCA-LVISTPAAITSGLAAAARRGALIKGGAALEQLGRVT 437 (741)
T ss_pred ---------H----------------HHHHHHHHHHHHhchhh-hhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCC
Confidence 2 67788999999999999 999999999999999999999999999999999999
Q ss_pred EEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhccccc
Q 043517 392 AICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCT 471 (956)
Q Consensus 392 ~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~ 471 (956)
++|||||||||+|+|+|.+++..+.. ++ .+++..+.+++..+.| |+++||++++. +.+.+
T Consensus 438 ~v~fDKTGTLT~g~~~v~~~~~~~~~------~~--~~~l~~aa~~e~~s~h--Pia~Ai~~~a~-~~~~~--------- 497 (741)
T PRK11033 438 TVAFDKTGTLTEGKPQVTDIHPATGI------SE--SELLALAAAVEQGSTH--PLAQAIVREAQ-VRGLA--------- 497 (741)
T ss_pred EEEEeCCCCCcCCceEEEEEEecCCC------CH--HHHHHHHHHHhcCCCC--HHHHHHHHHHH-hcCCC---------
Confidence 99999999999999999999865432 12 2445556666655544 99999999998 55442
Q ss_pred ccccCCCCCeEE---EEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhcccc
Q 043517 472 VEAFNISKNRAG---LLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHS 548 (956)
Q Consensus 472 ~~~F~s~~k~~s---vv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G 548 (956)
+||.++++.+. +.....+ .. + ..|+|+.+.+ ++ +++.+.++++.. +|
T Consensus 498 -~~~~~~~~~~~g~Gv~~~~~g-----~~-~---~ig~~~~~~~--------------~~----~~~~~~~~~~~~--~g 547 (741)
T PRK11033 498 -IPEAESQRALAGSGIEGQVNG-----ER-V---LICAPGKLPP--------------LA----DAFAGQINELES--AG 547 (741)
T ss_pred -CCCCcceEEEeeEEEEEEECC-----EE-E---EEecchhhhh--------------cc----HHHHHHHHHHHh--CC
Confidence 45656655542 2222222 22 3 3589887743 11 234445667888 99
Q ss_pred ceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcc
Q 043517 549 LRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLIL 628 (956)
Q Consensus 549 ~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~ 628 (956)
+|++++|+ |.+++|+++++|++|||++++|++|+ +.|++++|+|||+..+|.++|+++||
T Consensus 548 ~~~v~va~-----------------~~~~~g~i~l~d~~r~~a~~~i~~L~-~~gi~~~llTGd~~~~a~~ia~~lgi-- 607 (741)
T PRK11033 548 KTVVLVLR-----------------NDDVLGLIALQDTLRADARQAISELK-ALGIKGVMLTGDNPRAAAAIAGELGI-- 607 (741)
T ss_pred CEEEEEEE-----------------CCEEEEEEEEecCCchhHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHcCC--
Confidence 99999998 67999999999999999999999999 99999999999999999999999999
Q ss_pred cCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc
Q 043517 629 KPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 629 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG 708 (956)
+ .+++..|++|.++++.+|+. +.|+|+|||.||+|||+.||||
T Consensus 608 ~------------------------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vg 650 (741)
T PRK11033 608 D------------------------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIG 650 (741)
T ss_pred C------------------------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCee
Confidence 4 46889999999999999965 5899999999999999999999
Q ss_pred EEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043517 709 VSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVA 770 (956)
Q Consensus 709 Iamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~ 770 (956)
|||| ++++.++++||+++.++++..+.++++.||++++||++++.|++.||++.+.+++++
T Consensus 651 ia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 651 IAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred EEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999 899999999999999999999999999999999999999999999999988877654
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-72 Score=647.62 Aligned_cols=586 Identities=19% Similarity=0.232 Sum_probs=467.0
Q ss_pred CchHHHHHHHHHhhHH---HHHHHHHHHHHHHhcc------ccCCCcccchhhHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 043517 84 SLHFGRLISDSIKDST---VILLLCCATLSLLLGI------KRNGFEQGILDGAMVFVVISSV-VCISSLFRFVKNWINE 153 (956)
Q Consensus 84 ~~s~~~~l~~~~~~~~---~~~ll~~~~ls~~~~~------~~~~~~~~~~~~~~i~~~~l~~-~~i~~~~~~~~~~~~~ 153 (956)
..+|+...|+.+++.. ..+..+++..+++++. ...+.+..|+|...+++.++.. -.++.....+...++.
T Consensus 291 G~~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~als 370 (951)
T KOG0207|consen 291 GRPFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEALS 370 (951)
T ss_pred ceeeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHHHH
Confidence 4556666677776652 3333333333333332 0012245577776666655544 4555555556666666
Q ss_pred HhHhhhhhcCCcEEEEECCE-EEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC----------CCCCeEee
Q 043517 154 LLVSKRTSRRAAVKVMRDGR-VRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD----------DKLPCIFT 222 (956)
Q Consensus 154 ~l~~~~~~~~~~~~V~Rdg~-~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~----------~~~~~l~~ 222 (956)
+| ....|.++.++.+|+ +++||.+.+.+||+|.|.||++||+||++++|++ .||||. .+++.+.+
T Consensus 371 kL---msl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~Via 446 (951)
T KOG0207|consen 371 KL---MSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKKKGSTVIA 446 (951)
T ss_pred HH---hhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccCCCCeeee
Confidence 66 467889999999997 8999999999999999999999999999999999 999999 67899999
Q ss_pred ccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 043517 223 GAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGD 302 (956)
Q Consensus 223 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~ 302 (956)
||.+.+|.....++++|.+|.++||.+++++++ ..++|+|+.+||++.+++++++++++.++++|++...+..
T Consensus 447 GsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ------~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~- 519 (951)
T KOG0207|consen 447 GSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQ------LSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVF- 519 (951)
T ss_pred eeecCCceEEEEEEeccccchHHHHHHHHHHHH------cccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccc-
Confidence 999999999999999999999999999999999 8999999999999999999999999999999855433211
Q ss_pred CCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCccccccc
Q 043517 303 DDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLP 382 (956)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~ 382 (956)
.....|. ..+. .++..++++++++|||+ |.++.|++...+....+++|+++|..+
T Consensus 520 -~~~~~~~-------~~~~----------------~a~~~aisVlviACPCa-LgLATPtAvmvatgvgA~nGvLIKGge 574 (951)
T KOG0207|consen 520 -KYPRSFF-------DAFS----------------HAFQLAISVLVIACPCA-LGLATPTAVMVATGVGATNGVLIKGGE 574 (951)
T ss_pred -cCcchhh-------HHHH----------------HHHHhhheEEEEECchh-hhcCCceEEEEEechhhhcceEEcCcH
Confidence 0011111 1223 78899999999999999 999999999999999999999999999
Q ss_pred ccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCC
Q 043517 383 VCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVD 462 (956)
Q Consensus 383 ~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~ 462 (956)
.+|.+.++++++||||||||+|++.|.++....+.. ...+.+....+.++..+| |+.+|+++|++ ..+..
T Consensus 575 ~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~-------~~~e~l~~v~a~Es~SeH--Pig~AIv~yak-~~~~~ 644 (951)
T KOG0207|consen 575 ALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI-------SLKEALALVAAMESGSEH--PIGKAIVDYAK-EKLVE 644 (951)
T ss_pred HHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc-------cHHHHHHHHHHHhcCCcC--chHHHHHHHHH-hcccc
Confidence 999999999999999999999999999999877641 234556667777777777 99999999999 44421
Q ss_pred hhhhcccccccccCCCCCeE-EEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHH
Q 043517 463 GDKMKQNCTVEAFNISKNRA-GLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRD 541 (956)
Q Consensus 463 ~~~~~~~~~~~~F~s~~k~~-svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~ 541 (956)
..... ...|+..+.+. ++-++..+ .+ .+-|+-+.+... |.. ..++++..+++
T Consensus 645 ~~~~~----~~~~~~~pg~g~~~~~~~~~-----~~----i~iGN~~~~~r~--------~~~------~~~~i~~~~~~ 697 (951)
T KOG0207|consen 645 PNPEG----VLSFEYFPGEGIYVTVTVDG-----NE----VLIGNKEWMSRN--------GCS------IPDDILDALTE 697 (951)
T ss_pred cCccc----cceeecccCCCcccceEEee-----eE----EeechHHHHHhc--------CCC------CchhHHHhhhh
Confidence 11100 22222222221 12122211 22 355998888642 221 12347777777
Q ss_pred HhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHH
Q 043517 542 IEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIA 621 (956)
Q Consensus 542 ~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia 621 (956)
... .|..+..++. |.++.|++.++|++|||+..+|+.|+ +.||+++|+||||..+|+++|
T Consensus 698 ~e~--~g~tvv~v~v-----------------n~~l~gv~~l~D~vr~~a~~av~~Lk-~~Gi~v~mLTGDn~~aA~svA 757 (951)
T KOG0207|consen 698 SER--KGQTVVYVAV-----------------NGQLVGVFALEDQVRPDAALAVAELK-SMGIKVVMLTGDNDAAARSVA 757 (951)
T ss_pred Hhh--cCceEEEEEE-----------------CCEEEEEEEeccccchhHHHHHHHHH-hcCceEEEEcCCCHHHHHHHH
Confidence 777 9999999998 88999999999999999999999999 999999999999999999999
Q ss_pred HhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHH
Q 043517 622 INSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPS 701 (956)
Q Consensus 622 ~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~a 701 (956)
+++|+ +. |+|+..|+||.++|+.+|++++.|+|+|||+||+||
T Consensus 758 ~~VGi--~~-----------------------------------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPA 800 (951)
T KOG0207|consen 758 QQVGI--DN-----------------------------------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPA 800 (951)
T ss_pred HhhCc--ce-----------------------------------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHH
Confidence 99999 76 999999999999999999999999999999999999
Q ss_pred hhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCc
Q 043517 702 LKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCG--EIPL 779 (956)
Q Consensus 702 l~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~--~~pl 779 (956)
|.+|||||||| .|++.|.++||+|+++|++..++.+|..+|++.+|+|.|+.|++.||++.++++...++..+ ..|.
T Consensus 801 LA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw 879 (951)
T KOG0207|consen 801 LAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPW 879 (951)
T ss_pred HHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCch
Confidence 99999999999 88999999999999999999999999999999999999999999999999888765554443 1233
Q ss_pred hHHHHHHHHhhhhHHhHHhhc
Q 043517 780 EPFQLLWVNLIMDVLGALALA 800 (956)
Q Consensus 780 ~~~q~l~~~~~~~~~~~l~l~ 800 (956)
-+...+..+.+...+.++.|-
T Consensus 880 ~A~lama~SSvsVv~sSllLk 900 (951)
T KOG0207|consen 880 MASLAMAASSVSVVLSSLLLK 900 (951)
T ss_pred HHHHHHHhhhHHHhhhHHHHh
Confidence 344445555555555555554
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-71 Score=657.66 Aligned_cols=518 Identities=21% Similarity=0.313 Sum_probs=434.5
Q ss_pred HHHHHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECC-EEEEEEc
Q 043517 101 ILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDG-RVRQIAV 179 (956)
Q Consensus 101 ~~ll~~~~ls~~~~~~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg-~~~~I~~ 179 (956)
.++.++++++++++. |.++..+++++++...++...+++.++.+++| ....+..++|+||| ++++|++
T Consensus 3 ~l~~~~~~~~~~~~~--------~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l---~~~~~~~~~v~r~~g~~~~i~~ 71 (556)
T TIGR01525 3 LLMALATIAAYAMGL--------VLEGALLLFLFLLGETLEERAKGRASDALSAL---LALAPSTARVLQGDGSEEEVPV 71 (556)
T ss_pred HHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCEEEEEECCCeEEEEEH
Confidence 445667777777776 88888888888888899999999988888888 46678899999996 9999999
Q ss_pred cccccCcEEEeCCCCcccccEEEEeeCCceecccC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHH
Q 043517 180 SEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMK 249 (956)
Q Consensus 180 ~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~ 249 (956)
++|+|||+|.+++||+|||||+|++|+. .||||. ..++.+|+||.+.+|.++++|++||.+|++|++.+
T Consensus 72 ~~l~~GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~ 150 (556)
T TIGR01525 72 EELQVGDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVK 150 (556)
T ss_pred HHCCCCCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHH
Confidence 9999999999999999999999999997 999999 56899999999999999999999999999999999
Q ss_pred hhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHh
Q 043517 250 LLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFI 329 (956)
Q Consensus 250 ~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (956)
.+.+.+ .+++|+++.++++++++.+++++++++++++|+. .+. +
T Consensus 151 ~~~~~~------~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~---~~~-------~-------------------- 194 (556)
T TIGR01525 151 LVEEAQ------SSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA---LGA-------L-------------------- 194 (556)
T ss_pred HHHHHh------hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc-------c--------------------
Confidence 998877 7899999999999999999999999988888632 110 0
Q ss_pred hccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEE
Q 043517 330 RRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMA 409 (956)
Q Consensus 330 ~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~ 409 (956)
..+.+++++++++|||+ ||+++++++..++++|+++|+++|+++++|++|++|++|||||||||+|+|+|.
T Consensus 195 --------~~~~~~~~vlv~~~P~a-l~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~ 265 (556)
T TIGR01525 195 --------GALYRALAVLVVACPCA-LGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVV 265 (556)
T ss_pred --------hHHHHHHHHHhhccccc-hhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEE
Confidence 45788999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEEecC
Q 043517 410 ELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWN 489 (956)
Q Consensus 410 ~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~ 489 (956)
+++..+.... ...+++..+.+++.... ||+++||+++++ +.+.+... ..+.+.+ +.+ ++.....
T Consensus 266 ~~~~~~~~~~------~~~~~l~~a~~~e~~~~--hp~~~Ai~~~~~-~~~~~~~~-~~~~~~~---~~~---gi~~~~~ 329 (556)
T TIGR01525 266 DVEPLDDASI------SEEELLALAAALEQSSS--HPLARAIVRYAK-KRGLELPK-QEDVEEV---PGK---GVEATVD 329 (556)
T ss_pred EEEecCCCCc------cHHHHHHHHHHHhccCC--ChHHHHHHHHHH-hcCCCccc-ccCeeEe---cCC---eEEEEEC
Confidence 9987654210 01234444555554443 499999999998 66654321 0010011 111 1111111
Q ss_pred CCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHh
Q 043517 490 GSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIE 569 (956)
Q Consensus 490 ~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~ 569 (956)
+ . ..+..|+++.+ + + ++. + .+++++.++.++. +|+|++.++.
T Consensus 330 g-----~---~~~~lg~~~~~-~-~------~~~--~-----~~~~~~~~~~~~~--~g~~~~~v~~------------- 371 (556)
T TIGR01525 330 G-----Q---EEVRIGNPRLL-E-L------AAE--P-----ISASPDLLNEGES--QGKTVVFVAV------------- 371 (556)
T ss_pred C-----e---eEEEEecHHHH-h-h------cCC--C-----chhhHHHHHHHhh--CCcEEEEEEE-------------
Confidence 1 0 12344666654 1 0 111 0 1122345567788 9999999997
Q ss_pred hhccCcEEEEEeeecccCcHHHHHHHHHHHhhCC-CEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechh
Q 043517 570 LTECGLTWLGLVRLKSAYASEVKQAIEDCRESAG-IKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASV 648 (956)
Q Consensus 570 ~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~G-i~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~ 648 (956)
|.+++|.+.++|++||+++++|++|+ +.| ++++|+|||+..++..+++++|+ +.
T Consensus 372 ----~~~~~g~i~~~d~~~~g~~e~l~~L~-~~g~i~v~ivTgd~~~~a~~i~~~lgi--~~------------------ 426 (556)
T TIGR01525 372 ----DGELLGVIALRDQLRPEAKEAIAALK-RAGGIKLVMLTGDNRSAAEAVAAELGI--DE------------------ 426 (556)
T ss_pred ----CCEEEEEEEecccchHhHHHHHHHHH-HcCCCeEEEEeCCCHHHHHHHHHHhCC--Ce------------------
Confidence 67999999999999999999999999 999 99999999999999999999999 65
Q ss_pred hhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeec
Q 043517 649 FRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVIL 728 (956)
Q Consensus 649 ~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~ 728 (956)
+|+++.|++|.++++.+++.++.|+|+|||.||++|++.||+|+++| ++++.+++.||+++.
T Consensus 427 -----------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~ 488 (556)
T TIGR01525 427 -----------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLL 488 (556)
T ss_pred -----------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEe
Confidence 89999999999999999999999999999999999999999999999 899999999999999
Q ss_pred cCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043517 729 DENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAI 772 (956)
Q Consensus 729 ~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~ 772 (956)
+++++.+.+++++||++++++++++.|++.+|++.+++++.+++
T Consensus 489 ~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~ 532 (556)
T TIGR01525 489 NDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLL 532 (556)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999887765543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-70 Score=644.68 Aligned_cols=497 Identities=21% Similarity=0.308 Sum_probs=426.1
Q ss_pred HHHHHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEcc
Q 043517 101 ILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVS 180 (956)
Q Consensus 101 ~~ll~~~~ls~~~~~~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~ 180 (956)
.++.++++++++.+. |+++..+++++++...++.+++++.++.++++ ....+.+++|+|||++++++++
T Consensus 3 ~l~~~a~~~~~~~~~--------~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l---~~~~~~~~~v~r~g~~~~i~~~ 71 (536)
T TIGR01512 3 LLMALAALGAVAIGE--------YLEGALLLLLFSIGETLEEYASGRARRALKAL---MELAPDTARVLRGGSLEEVAVE 71 (536)
T ss_pred HHHHHHHHHHHHHhh--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCEEEEEECCEEEEEEHH
Confidence 356677777777775 89998888888888889999999988888888 5677889999999999999999
Q ss_pred ccccCcEEEeCCCCcccccEEEEeeCCceecccC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHh
Q 043517 181 EVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKL 250 (956)
Q Consensus 181 ~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~ 250 (956)
+|+|||+|.+++||+|||||++++|+. .||||+ ..++.+|+||.+.+|.++++|++||.+|.+||+.++
T Consensus 72 ~l~~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~ 150 (536)
T TIGR01512 72 ELKVGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNL 150 (536)
T ss_pred HCCCCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHH
Confidence 999999999999999999999999987 999999 568899999999999999999999999999999999
Q ss_pred hcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhh
Q 043517 251 LSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIR 330 (956)
Q Consensus 251 ~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (956)
+.+.+ .+++|+|+.++++++++.++++++++++++++. ++. .| .
T Consensus 151 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------~~-----------~--------- 194 (536)
T TIGR01512 151 VEEAQ------SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPG---LLK-------RW-----------P--------- 194 (536)
T ss_pred HHHHh------hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhc-------cc-----------H---------
Confidence 99887 788999999999999999999998888777652 221 01 1
Q ss_pred ccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEE
Q 043517 331 RQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAE 410 (956)
Q Consensus 331 ~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~ 410 (956)
..+.+++++++++|||+ ||+++|+++..++++++|+|+++|+++++|++|++|++|||||||||+|+|+|.+
T Consensus 195 -------~~~~~~~svlv~~~P~a-L~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~ 266 (536)
T TIGR01512 195 -------FWVYRALVLLVVASPCA-LVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVD 266 (536)
T ss_pred -------HHHHHHHHHHhhcCccc-cccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEE
Confidence 45778999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEEecCC
Q 043517 411 LWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNG 490 (956)
Q Consensus 411 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~~ 490 (956)
++.. +++..+.+++.... ||+++||+++++ +.+ +..+.+ .+| .+ ++.....+
T Consensus 267 ~~~~--------------~~l~~a~~~e~~~~--hp~~~Ai~~~~~-~~~-~~~~~~----~~~---g~---gi~~~~~g 318 (536)
T TIGR01512 267 VVPA--------------EVLRLAAAAEQASS--HPLARAIVDYAR-KRE-NVESVE----EVP---GE---GVRAVVDG 318 (536)
T ss_pred eeHH--------------HHHHHHHHHhccCC--CcHHHHHHHHHH-hcC-CCcceE----Eec---CC---eEEEEECC
Confidence 8642 34555556655544 499999999998 443 111110 111 11 22222222
Q ss_pred CCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhh
Q 043517 491 SESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIEL 570 (956)
Q Consensus 491 ~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~ 570 (956)
.+ + ..|+++.+.+.. . ..+.. +|.+++.++.
T Consensus 319 -----~~-~---~ig~~~~~~~~~--------~----------------~~~~~--~~~~~~~v~~-------------- 349 (536)
T TIGR01512 319 -----GE-V---RIGNPRSLEAAV--------G----------------ARPES--AGKTIVHVAR-------------- 349 (536)
T ss_pred -----eE-E---EEcCHHHHhhcC--------C----------------cchhh--CCCeEEEEEE--------------
Confidence 22 3 459887653311 0 03445 8888877765
Q ss_pred hccCcEEEEEeeecccCcHHHHHHHHHHHhhCCC-EEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhh
Q 043517 571 TECGLTWLGLVRLKSAYASEVKQAIEDCRESAGI-KIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVF 649 (956)
Q Consensus 571 ~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi-~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~ 649 (956)
|..++|.+.++|++||+++++|++|+ ++|+ +++|+|||+..++..+++++|+ +.
T Consensus 350 ---~~~~~g~i~~~d~l~~~~~e~i~~L~-~~Gi~~v~vvTgd~~~~a~~i~~~lgi--~~------------------- 404 (536)
T TIGR01512 350 ---DGTYLGYILLSDEPRPDAAEAIAELK-ALGIEKVVMLTGDRRAVAERVARELGI--DE------------------- 404 (536)
T ss_pred ---CCEEEEEEEEeccchHHHHHHHHHHH-HcCCCcEEEEcCCCHHHHHHHHHHcCC--hh-------------------
Confidence 78999999999999999999999999 9999 9999999999999999999999 65
Q ss_pred hcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeecc
Q 043517 650 RSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILD 729 (956)
Q Consensus 650 ~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~ 729 (956)
+|++..|++|.++++.++++++.|+|+|||.||++|++.||+||+||.++++.+++.||+++.+
T Consensus 405 ----------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~ 468 (536)
T TIGR01512 405 ----------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLN 468 (536)
T ss_pred ----------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEEC
Confidence 7899999999999999999999999999999999999999999999966899999999999999
Q ss_pred CChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043517 730 ENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAA 771 (956)
Q Consensus 730 ~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~ 771 (956)
+++..+.++++.||++++++++++.|++.||++.+.+++++.
T Consensus 469 ~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~ 510 (536)
T TIGR01512 469 DDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGV 510 (536)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999888877653
|
. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-70 Score=641.77 Aligned_cols=470 Identities=27% Similarity=0.419 Sum_probs=412.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecc
Q 043517 133 VISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDD 212 (956)
Q Consensus 133 ~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vde 212 (956)
++++..+++.+.+++.++..+++.+ +..++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|+. .|||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vde 81 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKD-LLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDE 81 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEc
Confidence 4456678888899999999988833 33788999999999 9999999999999999999999999999999986 9999
Q ss_pred cC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHH-HHHHHH
Q 043517 213 GD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMG-SRMEKI 281 (956)
Q Consensus 213 s~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~-~~~~~~ 281 (956)
|. ..++.+++||.+.+|...+.|+++|.+|..+++...+.... ..++++++..+++. .++.++
T Consensus 82 s~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~------~~k~~~~~~~~~~~~~~~~~~ 155 (499)
T TIGR01494 82 SNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGF------ETKTPLQPKLDRLSDIIFILF 155 (499)
T ss_pred ccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcC------CCCCchHHHHHHHHHHHHHHH
Confidence 99 34789999999999999999999999999999999998777 66899999999999 788888
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHH
Q 043517 282 WLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLF 361 (956)
Q Consensus 282 ~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~ 361 (956)
.++++++++++|+..+. . ..+ +. ..+.+++++++++|||+ ||++++
T Consensus 156 ~~~la~~~~~~~~~~~~-~-----~~~-----------~~----------------~~~~~~~~vl~~~~P~a-L~~~~~ 201 (499)
T TIGR01494 156 VLLIALAVFLFWAIGLW-D-----PNS-----------IF----------------KIFLRALILLVIAIPIA-LPLAVT 201 (499)
T ss_pred HHHHHHHHHHHHHHHHc-c-----ccc-----------HH----------------HHHHHHHHHHHHhcCCc-HHHHHH
Confidence 88888888777643211 0 001 22 77899999999999999 999999
Q ss_pred HHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCC
Q 043517 362 ICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYD 441 (956)
Q Consensus 362 ~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 441 (956)
+++..+..+|+++|+++|+++++|+||++|++|||||||||+|+|++.++++.+.. .
T Consensus 202 ~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-----------------------~ 258 (499)
T TIGR01494 202 IALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGGE-----------------------Y 258 (499)
T ss_pred HHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCCC-----------------------c
Confidence 99999999999999999999999999999999999999999999999999875321 1
Q ss_pred CCCCCcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccC
Q 043517 442 EAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRH 521 (956)
Q Consensus 442 ~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 521 (956)
...||+|.|++++++ ..+. ...||++.+++|+++++.++ + .++||+++.+.+.|.+
T Consensus 259 ~s~hp~~~ai~~~~~-~~~~---------~~~~f~~~~~~~~~~~~~~~-----~----~~~~G~~~~i~~~~~~----- 314 (499)
T TIGR01494 259 LSGHPDERALVKSAK-WKIL---------NVFEFSSVRKRMSVIVRGPD-----G----TYVKGAPEFVLSRVKD----- 314 (499)
T ss_pred CCCChHHHHHHHHhh-hcCc---------ceeccCCCCceEEEEEecCC-----c----EEEeCCHHHHHHhhHH-----
Confidence 233589999999987 3211 26799999999999987532 2 3689999999998852
Q ss_pred CccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhh
Q 043517 522 GTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRES 601 (956)
Q Consensus 522 ~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~ 601 (956)
+.+..++++. +|+|++++|++ .+++|++.++|++|++++++|+.|+ +
T Consensus 315 -------------~~~~~~~~~~--~g~~~~~~a~~-----------------~~~~g~i~l~d~lr~~~~~~i~~l~-~ 361 (499)
T TIGR01494 315 -------------LEEKVKELAQ--SGLRVLAVASK-----------------ETLLGLLGLEDPLRDDAKETISELR-E 361 (499)
T ss_pred -------------HHHHHHHHHh--CCCEEEEEEEC-----------------CeEEEEEEecCCCchhHHHHHHHHH-H
Confidence 1223445778 99999999983 4899999999999999999999999 9
Q ss_pred CCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHH
Q 043517 602 AGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQC 681 (956)
Q Consensus 602 ~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~ 681 (956)
+|++++|+|||+..+|..+|+++|+ +++++|++|.++|+.
T Consensus 362 ~gi~~~~ltGD~~~~a~~ia~~lgi----------------------------------------~~~~~p~~K~~~v~~ 401 (499)
T TIGR01494 362 AGIRVIMLTGDNVLTAKAIAKELGI----------------------------------------FARVTPEEKAALVEA 401 (499)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHcCc----------------------------------------eeccCHHHHHHHHHH
Confidence 9999999999999999999999997 588999999999999
Q ss_pred HHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 043517 682 LKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNA 761 (956)
Q Consensus 682 lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni 761 (956)
+|+.|+.|+|+|||.||+||+++|||||||+ ++++||+++.++++..+..++++||++++++++++.|.+.+|+
T Consensus 402 l~~~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~ 475 (499)
T TIGR01494 402 LQKKGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNL 475 (499)
T ss_pred HHHCCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997 6889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 043517 762 AAFAVNLVAA 771 (956)
Q Consensus 762 ~~~~~~~~~~ 771 (956)
+.+++++.+.
T Consensus 476 ~~~~~a~~~~ 485 (499)
T TIGR01494 476 ILIPLAALLA 485 (499)
T ss_pred HHHHHHHHHH
Confidence 9877776533
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-69 Score=637.07 Aligned_cols=527 Identities=17% Similarity=0.249 Sum_probs=431.8
Q ss_pred chHHHHHHHHHhhH---HHHHHHHHHHHHHHhcc----c----cCCCcccchhhHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 043517 85 LHFGRLISDSIKDS---TVILLLCCATLSLLLGI----K----RNGFEQGILDGAMVFVVISSV-VCISSLFRFVKNWIN 152 (956)
Q Consensus 85 ~s~~~~l~~~~~~~---~~~~ll~~~~ls~~~~~----~----~~~~~~~~~~~~~i~~~~l~~-~~i~~~~~~~~~~~~ 152 (956)
.++++..|+.+++. +.++..++++.+++++. . +.+....|++...+++++++. ..++...+.+.++.+
T Consensus 3 ~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~ 82 (562)
T TIGR01511 3 RPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDAL 82 (562)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777777643 33444444444444322 0 011123577777665544443 566666666777777
Q ss_pred HHhHhhhhhcCCcEEEEEC-CEEEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC----------CCCCeEe
Q 043517 153 ELLVSKRTSRRAAVKVMRD-GRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD----------DKLPCIF 221 (956)
Q Consensus 153 ~~l~~~~~~~~~~~~V~Rd-g~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~----------~~~~~l~ 221 (956)
++| ....|.+++++|+ |++++|++++|+|||+|.|++||+|||||++++|+. .||||. ..++.+|
T Consensus 83 ~~L---~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs~pv~k~~gd~V~ 158 (562)
T TIGR01511 83 SKL---AKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDPVI 158 (562)
T ss_pred HHH---HhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCCCcEEcCCCCEEE
Confidence 777 5667889999985 677999999999999999999999999999999998 999999 5689999
Q ss_pred eccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccC
Q 043517 222 TGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWG 301 (956)
Q Consensus 222 ~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~ 301 (956)
+||.+.+|.++++|+++|.+|.+||+.+++.+++ .+++|+|+..+++++++.+++++++++++++|.
T Consensus 159 aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~------~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------- 225 (562)
T TIGR01511 159 AGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQ------QSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------- 225 (562)
T ss_pred eeeEECCceEEEEEEEecCCChHHHHHHHHHHHH------hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 9999999999999999999999999999999888 789999999999999999999998888877642
Q ss_pred CCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccc
Q 043517 302 DDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNL 381 (956)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~ 381 (956)
..+.+++++++++|||+ |++++|+++..++.+++++|+++|++
T Consensus 226 ------------------------------------~~~~~~~svlvvacPca-L~la~p~a~~~~~~~aa~~gIlik~~ 268 (562)
T TIGR01511 226 ------------------------------------FALEFAVTVLIIACPCA-LGLATPTVIAVATGLAAKNGVLIKDG 268 (562)
T ss_pred ------------------------------------HHHHHHHHHHHHhccch-hhhHHHHHHHHHHHHHHHCCeEEcCh
Confidence 44678899999999999 99999999999999999999999999
Q ss_pred cccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCC
Q 043517 382 PVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDV 461 (956)
Q Consensus 382 ~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~ 461 (956)
+++|+|+++|++|||||||||+|+|+|.++...+.. ++ .+++..+.+++..+.| |+++|++++++ +.+.
T Consensus 269 ~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~------~~--~~~l~~aa~~e~~s~H--Pia~Ai~~~~~-~~~~ 337 (562)
T TIGR01511 269 DALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR------DR--TELLALAAALEAGSEH--PLAKAIVSYAK-EKGI 337 (562)
T ss_pred HHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC------CH--HHHHHHHHHHhccCCC--hHHHHHHHHHH-hcCC
Confidence 999999999999999999999999999999865432 11 2456666777776655 99999999998 6655
Q ss_pred ChhhhcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHH
Q 043517 462 DGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRD 541 (956)
Q Consensus 462 ~~~~~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~ 541 (956)
+... ..+|.... ..++.....+ .+ +..|+++.+.+. +. .++ .
T Consensus 338 ~~~~------~~~~~~~~-g~Gi~~~~~g-----~~----~~iG~~~~~~~~--------~~--~~~------------~ 379 (562)
T TIGR01511 338 TLVE------VSDFKAIP-GIGVEGTVEG-----TK----IQLGNEKLLGEN--------AI--KID------------G 379 (562)
T ss_pred CcCC------CCCeEEEC-CceEEEEECC-----EE----EEEECHHHHHhC--------CC--CCC------------h
Confidence 4321 11222111 1233333222 22 356999886431 11 111 1
Q ss_pred HhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHH
Q 043517 542 IEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIA 621 (956)
Q Consensus 542 ~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia 621 (956)
+.. +|.+++.++. |.+++|++.++|++||+++++|++|+ +.|++++|+|||+..++..++
T Consensus 380 ~~~--~g~~~~~~~~-----------------~~~~~g~~~~~d~l~~~a~e~i~~Lk-~~Gi~v~ilSgd~~~~a~~ia 439 (562)
T TIGR01511 380 KAE--QGSTSVLVAV-----------------NGELAGVFALEDQLRPEAKEVIQALK-RRGIEPVMLTGDNRKTAKAVA 439 (562)
T ss_pred hhh--CCCEEEEEEE-----------------CCEEEEEEEecccccHHHHHHHHHHH-HcCCeEEEEcCCCHHHHHHHH
Confidence 235 8999998886 78999999999999999999999999 999999999999999999999
Q ss_pred HhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHH
Q 043517 622 INSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPS 701 (956)
Q Consensus 622 ~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~a 701 (956)
+++|+ + +|++..|++|.++++.++++++.|+|+|||.||++|
T Consensus 440 ~~lgi--~------------------------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~a 481 (562)
T TIGR01511 440 KELGI--N------------------------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPA 481 (562)
T ss_pred HHcCC--c------------------------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHH
Confidence 99999 3 688999999999999999999999999999999999
Q ss_pred hhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043517 702 LKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIF 773 (956)
Q Consensus 702 l~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~ 773 (956)
++.||+||+|| ++++.+++.||+++.+++++.+.++++.||++++++++++.|++.||++.+.+++.+.+.
T Consensus 482 l~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~~ 552 (562)
T TIGR01511 482 LAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYP 552 (562)
T ss_pred HhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999 899999999999999999999999999999999999999999999999988877655443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-68 Score=659.89 Aligned_cols=499 Identities=18% Similarity=0.242 Sum_probs=422.4
Q ss_pred cchhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCCCcccccEE
Q 043517 123 GILDGAMVF-VVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGL 201 (956)
Q Consensus 123 ~~~~~~~i~-~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ 201 (956)
.|++...++ +++.+.-+++...+.+..+.+++| ....|.+++|+|||++++|+.++|+|||+|.|++||+|||||+
T Consensus 284 ~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L---~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~ 360 (834)
T PRK10671 284 LYYEASAMIIGLINLGHMLEARARQRSSKALEKL---LDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGE 360 (834)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEE
Confidence 366754444 344444566666666666666666 5678899999999999999999999999999999999999999
Q ss_pred EEeeCCceecccC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHH
Q 043517 202 FVHGKNLKLDDGD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISV 271 (956)
Q Consensus 202 ll~g~~l~vdes~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~ 271 (956)
|++|+. .||||+ ..++.+|+||.+.+|.+.++|+++|.+|.+||+.+++++.+ ..++|+|+..
T Consensus 361 v~~g~~-~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~------~~k~~~~~~~ 433 (834)
T PRK10671 361 ITQGEA-WLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQ------SSKPEIGQLA 433 (834)
T ss_pred EEEceE-EEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHh------ccCCcHHHHH
Confidence 999986 999999 56899999999999999999999999999999999999888 7889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHc
Q 043517 272 DRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVS 351 (956)
Q Consensus 272 ~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~i 351 (956)
+++++++++++++++++++++|+. .+. .. .+. ..+.+++++++++|
T Consensus 434 d~~a~~~v~~v~~~a~~~~~~~~~---~~~----~~-----------~~~----------------~~~~~a~~vlv~ac 479 (834)
T PRK10671 434 DKISAVFVPVVVVIALVSAAIWYF---FGP----AP-----------QIV----------------YTLVIATTVLIIAC 479 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---hCC----ch-----------HHH----------------HHHHHHHHHHHHhc
Confidence 999999999999999988888632 221 00 122 56788999999999
Q ss_pred CCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHH
Q 043517 352 RDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDAL 431 (956)
Q Consensus 352 P~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l 431 (956)
||+ |++++|+++..++.+++|+|+++|+++++|+++++|++|||||||||+|+|+|.++...+.. + ..+.+
T Consensus 480 Pca-L~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~------~--~~~~l 550 (834)
T PRK10671 480 PCA-LGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV------D--EAQAL 550 (834)
T ss_pred ccc-hhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC------C--HHHHH
Confidence 999 99999999999999999999999999999999999999999999999999999998765432 1 13556
Q ss_pred HHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHH
Q 043517 432 REAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIIL 511 (956)
Q Consensus 432 ~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il 511 (956)
..+++++....| |+++||++++. ..... . ..+|....+. ++....+ ++ .+.+|+++.+.
T Consensus 551 ~~a~~~e~~s~h--p~a~Ai~~~~~-~~~~~--~------~~~~~~~~g~-Gv~~~~~------g~---~~~~G~~~~~~ 609 (834)
T PRK10671 551 RLAAALEQGSSH--PLARAILDKAG-DMTLP--Q------VNGFRTLRGL-GVSGEAE------GH---ALLLGNQALLN 609 (834)
T ss_pred HHHHHHhCCCCC--HHHHHHHHHHh-hCCCC--C------cccceEecce-EEEEEEC------CE---EEEEeCHHHHH
Confidence 667777777665 99999999876 33221 1 2234333322 3332222 22 34669999875
Q ss_pred HhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHH
Q 043517 512 SMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEV 591 (956)
Q Consensus 512 ~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~ 591 (956)
+.. ++ ++.+.+.++.++. +|.+++.+|+ |..++|++.++|++||++
T Consensus 610 ~~~------------~~---~~~~~~~~~~~~~--~g~~~v~va~-----------------~~~~~g~~~l~d~~r~~a 655 (834)
T PRK10671 610 EQQ------------VD---TKALEAEITAQAS--QGATPVLLAV-----------------DGKAAALLAIRDPLRSDS 655 (834)
T ss_pred HcC------------CC---hHHHHHHHHHHHh--CCCeEEEEEE-----------------CCEEEEEEEccCcchhhH
Confidence 321 11 2345566677788 9999999998 668999999999999999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecC
Q 043517 592 KQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANAS 671 (956)
Q Consensus 592 ~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~ 671 (956)
+++|++|+ +.|++++|+|||+..++..+++++|+ +. ++++..
T Consensus 656 ~~~i~~L~-~~gi~v~~~Tgd~~~~a~~ia~~lgi--~~-----------------------------------~~~~~~ 697 (834)
T PRK10671 656 VAALQRLH-KAGYRLVMLTGDNPTTANAIAKEAGI--DE-----------------------------------VIAGVL 697 (834)
T ss_pred HHHHHHHH-HCCCeEEEEcCCCHHHHHHHHHHcCC--CE-----------------------------------EEeCCC
Confidence 99999999 99999999999999999999999999 55 899999
Q ss_pred hhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHH
Q 043517 672 PLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRK 751 (956)
Q Consensus 672 p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~ 751 (956)
|++|.++++.++++++.|+|+|||.||++|++.||+||||| ++++.++++||+++.++++++|.++++.||+++.++++
T Consensus 698 p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~ 776 (834)
T PRK10671 698 PDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQ 776 (834)
T ss_pred HHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 043517 752 FIQLHLTVNAAAFAVNL 768 (956)
Q Consensus 752 ~~~~~l~~ni~~~~~~~ 768 (956)
|+.|++.||++.+.+++
T Consensus 777 Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 777 NLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988775
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-57 Score=485.05 Aligned_cols=529 Identities=19% Similarity=0.263 Sum_probs=411.3
Q ss_pred HHhhHHHHHHHHHHHHHHHhc----cccC-CCcccchh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcE
Q 043517 94 SIKDSTVILLLCCATLSLLLG----IKRN-GFEQGILD--GAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAV 166 (956)
Q Consensus 94 ~~~~~~~~~ll~~~~ls~~~~----~~~~-~~~~~~~~--~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~ 166 (956)
+.+||..++-++.+++..++. .... +....|.- .++.++.+++..+.+++.|-+-+.+.+.|++ .+....+
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~--~~~~~~A 106 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRK--TKTETIA 106 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHH--HHHHHHH
Confidence 346676666555555554322 2111 11222222 2223333444456666666666666677732 3344567
Q ss_pred EEEEC-CEEEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC----------CC---CCeEeeccEEeeeeEE
Q 043517 167 KVMRD-GRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD----------DK---LPCIFTGAKVVGGECS 232 (956)
Q Consensus 167 ~V~Rd-g~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~----------~~---~~~l~~Gt~v~~g~~~ 232 (956)
+++++ |.++.+++.+|+.||+|.+++||+||+||.+++|.+ .||||. +. .+-+-.||.|++...+
T Consensus 107 ~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ 185 (681)
T COG2216 107 RLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLK 185 (681)
T ss_pred HHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcceeeccCCCcccccCCcEEeeeeEE
Confidence 77775 899999999999999999999999999999999999 999999 22 2459999999999999
Q ss_pred EEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 043517 233 MLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGG 312 (956)
Q Consensus 233 ~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (956)
..+++...+|.+.|+..+++.++ .+|||.+-.+.-+..-+..+.++. +..++-+..+.++ . .
T Consensus 186 irita~pG~sFlDrMI~LVEgA~------R~KTPNEIAL~iLL~~LTliFL~~---~~Tl~p~a~y~~g-----~----~ 247 (681)
T COG2216 186 IRITANPGETFLDRMIALVEGAE------RQKTPNEIALTILLSGLTLIFLLA---VATLYPFAIYSGG-----G----A 247 (681)
T ss_pred EEEEcCCCccHHHHHHHHhhchh------ccCChhHHHHHHHHHHHHHHHHHH---HHhhhhHHHHcCC-----C----C
Confidence 99999999999999999999998 789998877655543333222221 1111111111110 0 0
Q ss_pred cccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeE
Q 043517 313 VRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTA 392 (956)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~ 392 (956)
..+...++++++.+|-. +.-.++..=..++.|+.+.|++.++..++|..|.+|+
T Consensus 248 -------------------------~~i~~LiALlV~LIPTT-IGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdt 301 (681)
T COG2216 248 -------------------------ASVTVLVALLVCLIPTT-IGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDT 301 (681)
T ss_pred -------------------------cCHHHHHHHHHHHhccc-HHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccE
Confidence 23456688999999999 9988888888899999999999999999999999999
Q ss_pred EeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhc--ccc
Q 043517 393 ICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMK--QNC 470 (956)
Q Consensus 393 i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~--~~~ 470 (956)
+..|||||+|-|+-...++++.+... .+.+..++.+++-... .|..++|++.++ +.+.+.+... ..+
T Consensus 302 liLDKTGTIT~GnR~A~~f~p~~gv~---------~~~la~aa~lsSl~De-TpEGrSIV~LA~-~~~~~~~~~~~~~~~ 370 (681)
T COG2216 302 LLLDKTGTITLGNRQASEFIPVPGVS---------EEELADAAQLASLADE-TPEGRSIVELAK-KLGIELREDDLQSHA 370 (681)
T ss_pred EEecccCceeecchhhhheecCCCCC---------HHHHHHHHHHhhhccC-CCCcccHHHHHH-HhccCCCcccccccc
Confidence 99999999999999999988876642 1334555555554443 389999999999 7776544322 224
Q ss_pred cccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccce
Q 043517 471 TVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLR 550 (956)
Q Consensus 471 ~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~r 550 (956)
+..||+.+.+++++-... ++ -+-|||++.+....+.. +| ..++++++..++-++ .|-.
T Consensus 371 ~fvpFtA~TRmSGvd~~~-------~~---~irKGA~dai~~~v~~~---~g-------~~p~~l~~~~~~vs~--~GGT 428 (681)
T COG2216 371 EFVPFTAQTRMSGVDLPG-------GR---EIRKGAVDAIRRYVRER---GG-------HIPEDLDAAVDEVSR--LGGT 428 (681)
T ss_pred eeeecceecccccccCCC-------Cc---eeecccHHHHHHHHHhc---CC-------CCCHHHHHHHHHHHh--cCCC
Confidence 488999999888876542 22 45899999998876521 22 234577888888898 9999
Q ss_pred eeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccC
Q 043517 551 CISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKP 630 (956)
Q Consensus 551 vl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~ 630 (956)
.++++. |..++|.+.++|-+||+.+|-+.+|| +.|||.+|+||||+.||..||++.|+ ++
T Consensus 429 PL~V~~-----------------~~~~~GVI~LkDivK~Gi~ERf~elR-~MgIkTvM~TGDN~~TAa~IA~EAGV--Dd 488 (681)
T COG2216 429 PLVVVE-----------------NGRILGVIYLKDIVKPGIKERFAELR-KMGIKTVMITGDNPLTAAAIAAEAGV--DD 488 (681)
T ss_pred ceEEEE-----------------CCEEEEEEEehhhcchhHHHHHHHHH-hcCCeEEEEeCCCHHHHHHHHHHhCc--hh
Confidence 999987 78999999999999999999999999 99999999999999999999999999 66
Q ss_pred CCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 631 GAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 631 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
..|+++||+|.++++.-|.+|+-|+|+|||.||+|||.+||||+|
T Consensus 489 -----------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~A 533 (681)
T COG2216 489 -----------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 533 (681)
T ss_pred -----------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhh
Confidence 789999999999999999999999999999999999999999999
Q ss_pred eCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 043517 711 IGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLT 758 (956)
Q Consensus 711 mg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~ 758 (956)
|. +|+..||+++++|=+|.|...+.+.++.|++.+-+=-..-.|++.
T Consensus 534 MN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIA 580 (681)
T COG2216 534 MN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIA 580 (681)
T ss_pred hc-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehh
Confidence 99 999999999999999999999999999999976544444444443
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=272.29 Aligned_cols=212 Identities=26% Similarity=0.407 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCc-EEEEECCEEEEEEccccccCcEEEeCCCCcccccEEEEe-eCC
Q 043517 130 VFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAA-VKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVH-GKN 207 (956)
Q Consensus 130 i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~-~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~-g~~ 207 (956)
+++++++..+++.++++++++..+++ ....+.+ ++|+|||++++++++||+|||+|.|++||++||||++++ |+.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~ 78 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKL---NNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSA 78 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---CTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHH---hccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccc
Confidence 45566667888889999999988888 3445555 999999999999999999999999999999999999999 765
Q ss_pred ceecccC----------C-----CCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHH
Q 043517 208 LKLDDGD----------D-----KLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVD 272 (956)
Q Consensus 208 l~vdes~----------~-----~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~ 272 (956)
.||||. . .++++|+||.+.+|.+.++|++||.+|..|++.+...+++ .+++++++.++
T Consensus 79 -~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~------~~~~~~~~~~~ 151 (230)
T PF00122_consen 79 -YVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSE------SKKSPLERKLN 151 (230)
T ss_dssp -EEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSC------SS-THHHHHHH
T ss_pred -ccccccccccccccccccccccccchhhccccccccccccccceeeeccccccccccccccc------ccchhhhhhhH
Confidence 999988 5 8999999999999999999999999999999999998877 67799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcC
Q 043517 273 RMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSR 352 (956)
Q Consensus 273 ~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP 352 (956)
++..++.++.++++++++++++.. . ... ++. ..+..++++++++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~-----------~~~----------------~~~~~~i~~l~~~~P 197 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIWFFN---D----SGI-----------SFF----------------KSFLFAISLLIVLIP 197 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHTG---S----TTC-----------HCC----------------HHHHHHHHHHHHHS-
T ss_pred HHHHHHHhcccccchhhhccceec---c----ccc-----------ccc----------------cccccccceeeeecc
Confidence 999999999988888777664321 1 122 233 788999999999999
Q ss_pred CCchhHHHHHHHHHHHhhcccCCccccccccccc
Q 043517 353 DGLLPIGLFICLAYASKKLPCFRATARNLPVCSS 386 (956)
Q Consensus 353 ~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~ 386 (956)
++ ||+++++++..++++|+++|+++|+++++|+
T Consensus 198 ~~-l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 198 CA-LPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp TT-HHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cc-eeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 99 9999999999999999999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-23 Score=231.05 Aligned_cols=287 Identities=15% Similarity=0.210 Sum_probs=216.7
Q ss_pred CchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccc---------------hH-H--
Q 043517 505 GSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQN---------------EE-E-- 566 (956)
Q Consensus 505 Ga~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~---------------~~-~-- 566 (956)
|-.+...+.|+++++ .....|++..+|.+.++.+.+-.. .| .++|+|||+....- +. .
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~Racl--sG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~ 773 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACL--SG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIE 773 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhh--cc-cchheecccHHHHHHHHhCCceEEeccCcccchhh
Confidence 567788999999998 556789999999999999998888 77 49999999752110 00 0
Q ss_pred -------------------H--------------HhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCC
Q 043517 567 -------------------I--------------IELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDD 613 (956)
Q Consensus 567 -------------------~--------------~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~ 613 (956)
+ ....-++.+|.|++....+.|++....|+.|. ++-||.+..|-++
T Consensus 774 T~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~-naCiRfVYFS~Ed 852 (1354)
T KOG4383|consen 774 TACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLD-NACIRFVYFSKED 852 (1354)
T ss_pred hhccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhh-hhheeeeeecchH
Confidence 0 12234678999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhcCCcccCCCCCCCCC----------------------------CcceeeechhhhcCCH-----------
Q 043517 614 INIARLIAINSGLILKPGAEDHSNG----------------------------YDAAVIEASVFRSSSE----------- 654 (956)
Q Consensus 614 ~~ta~~ia~~~Gi~~~~~~~~~~~~----------------------------~~~~~i~g~~~~~~~~----------- 654 (956)
....+-.|+++|| +.++++|..- -..+..+.++...+..
T Consensus 853 ELkSkVFAEKlGi--EaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq 930 (1354)
T KOG4383|consen 853 ELKSKVFAEKLGI--EAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQ 930 (1354)
T ss_pred HHHHHHHHHHhcc--ccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccc
Confidence 9999999999999 7777654210 0000111111110100
Q ss_pred -----------------------------HHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCcc--CHHHhh
Q 043517 655 -----------------------------ETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTR--DAPSLK 703 (956)
Q Consensus 655 -----------------------------~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~N--D~~al~ 703 (956)
+++++...-+..|.+++|+...++++.+|++|+++++.|...| ..-.+-
T Consensus 931 ~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNScifl 1010 (1354)
T KOG4383|consen 931 KMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFL 1010 (1354)
T ss_pred ccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEE
Confidence 1222233334489999999999999999999999999999988 444568
Q ss_pred hCCccEEeCCC------------ChH------------------HHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHH
Q 043517 704 EADVGVSIGER------------SAQ------------------FARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFI 753 (956)
Q Consensus 704 ~AdvGIamg~~------------~~~------------------~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~ 753 (956)
+||++||+..- ++. ...-++|+-......-.+.++|+.+|.....+|+++
T Consensus 1011 kadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cf 1090 (1354)
T KOG4383|consen 1011 KADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCF 1090 (1354)
T ss_pred ccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 99999998420 011 011234554444456678889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHh
Q 043517 754 QLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALA 798 (956)
Q Consensus 754 ~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~ 798 (956)
.|.+...+...+..++..++..+..|+..+++|.+++...+..+.
T Consensus 1091 LFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~ 1135 (1354)
T KOG4383|consen 1091 LFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIG 1135 (1354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999877555554
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-23 Score=217.78 Aligned_cols=211 Identities=27% Similarity=0.296 Sum_probs=147.7
Q ss_pred eeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhccc
Q 043517 390 VTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQN 469 (956)
Q Consensus 390 v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~ 469 (956)
|++||||||||||++++.+ .. . .....+..+........| |+..++..++. ..... ..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~----~-------~~~~~~~~~~~~~~~s~~--p~~~~~~~~~~-~~~~~-~~---- 58 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP----P-------SNEAALAIAAALEQGSEH--PIGKAIVEFAK-NHQWS-KS---- 58 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES----C-------SHHHHHHHHHHHHCTSTS--HHHHHHHHHHH-HHHHH-SC----
T ss_pred CeEEEEecCCCcccCeEEE---Ee----c-------cHHHHHHHHHHhhhcCCC--cchhhhhhhhh-hccch-hh----
Confidence 6899999999999999999 11 1 112333333344444444 89999999887 21000 00
Q ss_pred ccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccc
Q 043517 470 CTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSL 549 (956)
Q Consensus 470 ~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~ 549 (956)
..+|....+++..... + + . +. |+++.+...+.... ........... +|.
T Consensus 59 --~~~~~~~~~~~~~~~~--~-----~--~--~~-g~~~~~~~~~~~~~---------------~~~~~~~~~~~--~~~ 107 (215)
T PF00702_consen 59 --LESFSEFIGRGISGDV--D-----G--I--YL-GSPEWIHELGIRVI---------------SPDLVEEIQES--QGR 107 (215)
T ss_dssp --CEEEEEETTTEEEEEE--H-----C--H--EE-HHHHHHHHHHHHHH---------------HHHHHHHHHHH--HHH
T ss_pred --hhhheeeeeccccccc--c-----c--c--cc-ccchhhhhcccccc---------------ccchhhhHHHh--hCC
Confidence 0111111111111100 0 0 1 12 88888876554211 11111122233 666
Q ss_pred eeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCccc
Q 043517 550 RCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILK 629 (956)
Q Consensus 550 rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~ 629 (956)
+.+.++. ++.++|.+.+.|++|++++++|++|+ ++|++++|+|||+..++..+++++|| .
T Consensus 108 ~~~~~~~-----------------~~~~~~~~~~~d~~~~~~~~~l~~L~-~~Gi~~~i~TGD~~~~a~~~~~~lgi--~ 167 (215)
T PF00702_consen 108 TVIVLAV-----------------NLIFLGLFGLRDPLRPGAKEALQELK-EAGIKVAILTGDNESTASAIAKQLGI--F 167 (215)
T ss_dssp HCEEEEE-----------------SHEEEEEEEEEEEBHTTHHHHHHHHH-HTTEEEEEEESSEHHHHHHHHHHTTS--C
T ss_pred cccceee-----------------cCeEEEEEeecCcchhhhhhhhhhhh-ccCcceeeeecccccccccccccccc--c
Confidence 6777765 78999999999999999999999999 99999999999999999999999999 4
Q ss_pred CCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEec--ChhhH--HHHHHHHHhcCCeEEEEcCCccCHHHhhhC
Q 043517 630 PGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANA--SPLDK--LLMVQCLKQKGEVVAVTGMSTRDAPSLKEA 705 (956)
Q Consensus 630 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~--~p~~K--~~iv~~lq~~g~~v~~iGDG~ND~~al~~A 705 (956)
. ..+|+++ +|++| .++++.++..++.|+|+|||.||++|+++|
T Consensus 168 ~---------------------------------~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~A 214 (215)
T PF00702_consen 168 D---------------------------------SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAA 214 (215)
T ss_dssp S---------------------------------EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHS
T ss_pred c---------------------------------ccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhC
Confidence 3 1289999 99999 999999997777999999999999999999
Q ss_pred C
Q 043517 706 D 706 (956)
Q Consensus 706 d 706 (956)
|
T Consensus 215 g 215 (215)
T PF00702_consen 215 G 215 (215)
T ss_dssp S
T ss_pred c
Confidence 7
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=185.93 Aligned_cols=173 Identities=26% Similarity=0.465 Sum_probs=141.0
Q ss_pred CCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 043517 776 EIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVLSATQLKGNELL 853 (956)
Q Consensus 776 ~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 853 (956)
|.|+++.|+||+|+++|.+|++++++||+ ++|++ ||+++++++++++++..++.++++++++++..++.....+
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r----~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~ 76 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKR----PPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIF 76 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHST
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhc----cccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 57999999999999999999999999999 99999 9999999999999999999999999999888887666544
Q ss_pred cccc-----ccccchhHHHHHHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHHHH--HHhhcccc
Q 043517 854 QVQA-----NKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEM--VTVVTHGT 926 (956)
Q Consensus 854 ~~~~-----~~~~~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~~f~~~ 926 (956)
+.+. ....++|++|++++++|+++.+++|+.. .+.|+-.+.++|++++.++++++++++++++. ++.+|++.
T Consensus 77 ~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~-~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~ 155 (182)
T PF00689_consen 77 GWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR-RSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTA 155 (182)
T ss_dssp CSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS-STCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST--
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhccccccc-ccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhccc
Confidence 4321 1235899999999999999999999844 33443127789999999999999999988876 89999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHhhc
Q 043517 927 RMDLKDWCVCIGIAVMTLPTGLVAKCI 953 (956)
Q Consensus 927 ~l~~~~~~~~~~~~~~~~~~~~i~k~~ 953 (956)
++++.+|+++++.+++.++++|++|++
T Consensus 156 ~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 156 PLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp --THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999999999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.9e-14 Score=130.06 Aligned_cols=126 Identities=25% Similarity=0.257 Sum_probs=109.2
Q ss_pred cEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCH
Q 043517 575 LTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSE 654 (956)
Q Consensus 575 l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 654 (956)
+...+.++---++=++++++|++|+ +. +++++.|||..-+....|+-.|+ +..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~-d~-V~i~IASgDr~gsl~~lae~~gi--~~~----------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELH-DM-VDIYIASGDRKGSLVQLAEFVGI--PVE----------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHH-Hh-heEEEecCCcchHHHHHHHHcCC--cee-----------------------
Confidence 4567777888888899999999999 88 99999999999999999999999 331
Q ss_pred HHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEe-C-CCChHHHHhcCCeeeccCCh
Q 043517 655 ETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSI-G-ERSAQFARDCSDIVILDENF 732 (956)
Q Consensus 655 ~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIam-g-~~~~~~ak~~Ad~vl~~~~~ 732 (956)
++|+...|+.|.++++.|+++++.|.|+|||.||.+||+.||+||+. + .+..+.+.++||+++. +.
T Consensus 72 ----------rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i 139 (152)
T COG4087 72 ----------RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EI 139 (152)
T ss_pred ----------eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hH
Confidence 28999999999999999999999999999999999999999999985 3 2445567799999998 66
Q ss_pred hHHHHHH
Q 043517 733 TTIAANL 739 (956)
Q Consensus 733 ~~i~~~i 739 (956)
..+.++.
T Consensus 140 ~e~ldl~ 146 (152)
T COG4087 140 AEILDLL 146 (152)
T ss_pred HHHHHHh
Confidence 5665553
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.28 E-value=7.4e-12 Score=105.80 Aligned_cols=68 Identities=29% Similarity=0.461 Sum_probs=64.5
Q ss_pred hhCCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHH
Q 043517 33 QSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLS 110 (956)
Q Consensus 33 ~~~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls 110 (956)
+..+++++++.|+|+..+|||+ +||.+|+++||+|+++ +++++++|+.++++|++|++++|++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~--~ev~~r~~~~G~N~l~--------~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSS--EEVEERRKKYGPNELP--------EPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTH--HHHHHHHHHHSSSSTT--------TTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCH--HHHHHHHHhccccccc--------ccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 3468999999999999999999 9999999999999998 799999999999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.3e-11 Score=128.80 Aligned_cols=68 Identities=28% Similarity=0.328 Sum_probs=60.6
Q ss_pred hhHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 673 LDKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 673 ~~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.+|..-++.+.++ | +.|+++||+.||.+||+.|+.||||| |+.+.+|+.||+++.+++.++|.++|++
T Consensus 188 ~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 188 VSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred CchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 3687777777663 4 46999999999999999999999999 9999999999999999999999999876
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.3e-11 Score=130.56 Aligned_cols=67 Identities=21% Similarity=0.237 Sum_probs=58.6
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|..-++.+.++ .+.|+++|||.||.+||+.|++|+||+ ||.+.+|+.||+|+.+++.+++.++|++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 466666665544 267999999999999999999999999 9999999999999999999999998864
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.3e-11 Score=129.99 Aligned_cols=67 Identities=19% Similarity=0.139 Sum_probs=58.5
Q ss_pred hHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCe--eeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDI--VILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~--vl~~~~~~~i~~~i~~ 741 (956)
.|..-++.+.+. | +.|+++|||.||.+||+.|+.||||| |+.+.+|++||+ ++.+++.++++++|++
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~~ 260 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLTH 260 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHHH
Confidence 477777777654 3 57999999999999999999999999 999999999997 7788999999998854
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.5e-11 Score=128.86 Aligned_cols=67 Identities=22% Similarity=0.193 Sum_probs=57.6
Q ss_pred hHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCC--eeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD--IVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad--~vl~~~~~~~i~~~i~~ 741 (956)
.|..-++.+.++ | +.|+++||+.||.+||+.|+.|+||+ |+.+.+|+.|| .|+.+++.+++.++|++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 466666666544 2 67999999999999999999999999 99999999988 78889999999998864
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.9e-11 Score=126.82 Aligned_cols=151 Identities=18% Similarity=0.163 Sum_probs=102.9
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccC-----CCCCCCC---C--------------------
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKP-----GAEDHSN---G-------------------- 638 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~-----~~~~~~~---~-------------------- 638 (956)
+.+.+.++|++++ +.|++++++|||+...+..+++++|+ +. ++...+. .
T Consensus 21 i~~~~~~al~~l~-~~G~~~~iaTGR~~~~~~~~~~~l~~--~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (230)
T PRK01158 21 LSLKAVEAIRKAE-KLGIPVILATGNVLCFARAAAKLIGT--SGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKK 97 (230)
T ss_pred cCHHHHHHHHHHH-HCCCEEEEEcCCchHHHHHHHHHhCC--CCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHH
Confidence 7789999999999 99999999999999999999999998 32 1100000 0
Q ss_pred ---Ccceeeech--h--------hhcCCHHHHHhhhcc----ceE-----EEecChh--hHHHHHHHHHhc----CCeEE
Q 043517 639 ---YDAAVIEAS--V--------FRSSSEETRSLMVDN----VRV-----MANASPL--DKLLMVQCLKQK----GEVVA 690 (956)
Q Consensus 639 ---~~~~~i~g~--~--------~~~~~~~~~~~~~~~----~~v-----~ar~~p~--~K~~iv~~lq~~----g~~v~ 690 (956)
......... . ......+++.+.+.+ ..+ +....|. .|..-++.+.++ .+.++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i 177 (230)
T PRK01158 98 RFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVA 177 (230)
T ss_pred hccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEE
Confidence 000000000 0 000011122222111 111 1233333 377777766554 35799
Q ss_pred EEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 691 VTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 691 ~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
++||+.||.+|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 178 ~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 178 AIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred EECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 9999999999999999999999 9999999999999999999999998864
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.7e-11 Score=124.91 Aligned_cols=150 Identities=16% Similarity=0.180 Sum_probs=101.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccC-----CCCCCCCCCcceeeec--h-h---------
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKP-----GAEDHSNGYDAAVIEA--S-V--------- 648 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~-----~~~~~~~~~~~~~i~g--~-~--------- 648 (956)
++.+++.++|++|+ +.|++++++|||+...+..+++++++ +. ++.............. . .
T Consensus 18 ~i~~~~~~~i~~l~-~~g~~~~~~TGR~~~~~~~~~~~l~~--~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (215)
T TIGR01487 18 MISERAIEAIRKAE-KKGIPVSLVTGNTVPFARALAVLIGT--SGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKR 94 (215)
T ss_pred ccCHHHHHHHHHHH-HCCCEEEEEcCCcchhHHHHHHHhCC--CCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhh
Confidence 48899999999999 99999999999999999999999998 32 1110000000000000 0 0
Q ss_pred -----h-------------hcCCHHHHHhhhccc--eE-----EEecC--hhhHHHHHHHHHhc----CCeEEEEcCCcc
Q 043517 649 -----F-------------RSSSEETRSLMVDNV--RV-----MANAS--PLDKLLMVQCLKQK----GEVVAVTGMSTR 697 (956)
Q Consensus 649 -----~-------------~~~~~~~~~~~~~~~--~v-----~ar~~--p~~K~~iv~~lq~~----g~~v~~iGDG~N 697 (956)
+ .....+.+...+... .+ +...+ ...|...++.+.++ .+.++++||+.|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~N 174 (215)
T TIGR01487 95 FPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSEN 174 (215)
T ss_pred hhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 0 000001122111111 11 11222 34687777777654 346999999999
Q ss_pred CHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 698 DAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 698 D~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
|.+|++.|++|+||+ |+.+.+|+.||+++.+++.+++.++|
T Consensus 175 D~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 175 DIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 999999999999999 99999999999999988988988753
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.2e-10 Score=121.40 Aligned_cols=152 Identities=20% Similarity=0.207 Sum_probs=101.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccC-----CCCCCCCCCc--ce---eeech--------
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKP-----GAEDHSNGYD--AA---VIEAS-------- 647 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~-----~~~~~~~~~~--~~---~i~g~-------- 647 (956)
.+.+.+.++|++++ +.|++++++|||+...+..+++++|+ +. +....+.... .. .+...
T Consensus 15 ~i~~~~~~al~~l~-~~Gi~~~~aTGR~~~~~~~~~~~l~~--~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAE-SVGIPVVLVTGNSVQFARALAKLIGT--PDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHH-HCCCEEEEEcCCchHHHHHHHHHhCC--CCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 47789999999999 99999999999999999999999996 21 1100000000 00 00000
Q ss_pred ----------------hh----hcCCHHHHHhhhccc----e-----EEEecCh--hhHHHHHHHHHhc----CCeEEEE
Q 043517 648 ----------------VF----RSSSEETRSLMVDNV----R-----VMANASP--LDKLLMVQCLKQK----GEVVAVT 692 (956)
Q Consensus 648 ----------------~~----~~~~~~~~~~~~~~~----~-----v~ar~~p--~~K~~iv~~lq~~----g~~v~~i 692 (956)
.. .....+......... . .+....| ..|..-++.+.++ .+.++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~ 171 (225)
T TIGR01482 92 KTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVC 171 (225)
T ss_pred cccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 00 000111111111111 1 1122233 3687777777654 3679999
Q ss_pred cCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhH----HHHHHHH
Q 043517 693 GMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTT----IAANLKW 741 (956)
Q Consensus 693 GDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~----i~~~i~~ 741 (956)
||+.||.+|++.|++|+||+ |+.+.+|+.||+|+.+++..+ +.++|++
T Consensus 172 GD~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~~ 223 (225)
T TIGR01482 172 GDSENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQA 223 (225)
T ss_pred CCCHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHHh
Confidence 99999999999999999999 999999999999999999999 7766643
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.1e-10 Score=121.92 Aligned_cols=66 Identities=20% Similarity=0.213 Sum_probs=57.3
Q ss_pred hhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 673 LDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 673 ~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
..|..-++.+.+. .+.++++||+.||.+||+.||.|+||+ |+++..|+.||+++.+++-++++++|
T Consensus 185 vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 185 VSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp SSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred CCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHHhC
Confidence 4687777777653 368999999999999999999999999 99999999999999988879998875
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.9e-10 Score=134.06 Aligned_cols=66 Identities=20% Similarity=0.270 Sum_probs=56.6
Q ss_pred HHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 675 KLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 675 K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
|..-++.+.+. | +.|+++|||.||.+||+.|+.||||| ||.+.+|+.||+|+.+|+.++|+++|++
T Consensus 508 KG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 508 KGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 44444444433 2 57999999999999999999999999 9999999999999999999999999864
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.1e-10 Score=121.64 Aligned_cols=67 Identities=24% Similarity=0.269 Sum_probs=57.5
Q ss_pred hHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ | +.++++||+.||.+|++.|++|+||| |+.+..|+.||+++.+++.+++.++|++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 466655555433 3 57999999999999999999999999 8999999999999999999999998864
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.3e-10 Score=95.25 Aligned_cols=62 Identities=32% Similarity=0.435 Sum_probs=57.5
Q ss_pred HhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 043517 43 SLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLG 114 (956)
Q Consensus 43 ~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~ 114 (956)
.|++|++.|||+ +|+++|+++||+|+++ +++.+++|+.++++|++|+.++++++++++++.+
T Consensus 2 ~l~~~~~~GLs~--~~v~~r~~~~G~N~l~--------~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSS--EEAARRLERYGPNELP--------PPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCH--HHHHHHHHHhCCCCCC--------CCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 478888889999 9999999999999999 6777999999999999999999999999998764
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.4e-10 Score=102.05 Aligned_cols=67 Identities=25% Similarity=0.473 Sum_probs=55.0
Q ss_pred CCCCcHHHHHHHHHhhcC--CChhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhc
Q 043517 443 AAVDDDDALLLWAKEFLD--VDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHY 517 (956)
Q Consensus 443 ~~~p~e~Al~~~~~~~~~--~~~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~ 517 (956)
..+|+|.||+.++. +.| .+....+..++ .+||+|+||+|+|+++ ++ +. +.+|+|||||.|+++|+++
T Consensus 20 ~G~ptE~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~--~~----~~-~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 20 IGDPTEKALLRFAK-KLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR--ND----GK-YILYVKGAPEVILDRCTHI 91 (91)
T ss_pred cCCcCHHHHHHHHH-HcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe--CC----CE-EEEEcCCChHHHHHhcCCC
Confidence 44699999999999 884 45666666666 8999999999999998 22 34 7779999999999999853
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=113.06 Aligned_cols=130 Identities=11% Similarity=-0.009 Sum_probs=99.3
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcc-eeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDA-AVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~-~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
+++|++.+.|+.++ +.| +++++||-....+..+++++|+ +.--.... .... -.++|.
T Consensus 68 ~l~pga~ell~~lk-~~~-~~~IVS~~~~~~~~~il~~lgi--~~~~an~l-~~~~~g~~tG~----------------- 125 (203)
T TIGR02137 68 KPLEGAVEFVDWLR-ERF-QVVILSDTFYEFSQPLMRQLGF--PTLLCHKL-EIDDSDRVVGY----------------- 125 (203)
T ss_pred CCCccHHHHHHHHH-hCC-eEEEEeCChHHHHHHHHHHcCC--chhhceee-EEecCCeeECe-----------------
Confidence 47899999999999 875 9999999999999999999999 43100000 0000 111121
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHh
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWG 742 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~g 742 (956)
. ...++.|...++.+++.|..+.++|||.||.+|++.||+||++. +.+..+++||=...-.+.+.+..++.++
T Consensus 126 -~--~~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 126 -Q--LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred -e--ecCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 1 13577899999999988889999999999999999999999995 6777777777666656788888887775
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.9e-09 Score=114.19 Aligned_cols=67 Identities=21% Similarity=0.105 Sum_probs=54.5
Q ss_pred hHHHHHHHHHhc------CCeEEEEcCCccCHHHhhhCCccEEeCCCCh---HHHHhc--C-CeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK------GEVVAVTGMSTRDAPSLKEADVGVSIGERSA---QFARDC--S-DIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~------g~~v~~iGDG~ND~~al~~AdvGIamg~~~~---~~ak~~--A-d~vl~~~~~~~i~~~i~~ 741 (956)
.|..-++.+.++ .+.++++||+.||.+|++.|+.||||+ |+. +..|+. | ++|+.+++.+++.+++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 465555555433 467999999999999999999999999 887 468886 4 599999999999998864
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.1e-09 Score=118.79 Aligned_cols=131 Identities=12% Similarity=0.173 Sum_probs=99.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++||.....+..+.+++|+ +..-. +...+..|..-. .
T Consensus 181 ~l~pGa~elL~~Lk-~~G~~~aIvSgg~~~~~~~l~~~Lgl--d~~~a-----n~lei~dg~ltg--------------~ 238 (322)
T PRK11133 181 PLMPGLTELVLKLQ-ALGWKVAIASGGFTYFADYLRDKLRL--DAAVA-----NELEIMDGKLTG--------------N 238 (322)
T ss_pred CCChhHHHHHHHHH-HcCCEEEEEECCcchhHHHHHHHcCC--CeEEE-----eEEEEECCEEEe--------------E
Confidence 58899999999999 99999999999998888999999998 43000 000011110000 0
Q ss_pred EEE-ecChhhHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 666 VMA-NASPLDKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 666 v~a-r~~p~~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
+.. -+..+.|.+.++.+.++ | +.++++|||.||.+|++.||+|||| |+.+..++.||.++..++++++..++.
T Consensus 239 v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 239 VLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 111 02345788888877654 3 6899999999999999999999999 789999999999999999999987764
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.7e-09 Score=105.67 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=84.6
Q ss_pred HHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecC-
Q 043517 593 QAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANAS- 671 (956)
Q Consensus 593 ~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~- 671 (956)
.+|+.|+ +.|+++.++|+.+...+..+.+.+|+ .. .|....
T Consensus 41 ~~~~~L~-~~Gi~laIiT~k~~~~~~~~l~~lgi--~~-----------------------------------~f~~~kp 82 (169)
T TIGR02726 41 MGVIVLQ-LCGIDVAIITSKKSGAVRHRAEELKI--KR-----------------------------------FHEGIKK 82 (169)
T ss_pred HHHHHHH-HCCCEEEEEECCCcHHHHHHHHHCCC--cE-----------------------------------EEecCCC
Confidence 6899999 99999999999999999999999999 43 333332
Q ss_pred -hhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHH
Q 043517 672 -PLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTI 735 (956)
Q Consensus 672 -p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i 735 (956)
|+....+++.++-..+.++++||+.||.+|++.|++++||+ |+.+.++..|++|+.+++-.+.
T Consensus 83 kp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 83 KTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred CHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 33334444444433568999999999999999999999999 9999999999999876655444
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.92 E-value=9.4e-09 Score=112.11 Aligned_cols=67 Identities=16% Similarity=0.019 Sum_probs=52.9
Q ss_pred hHHHHHHHHHh-------cCCeEEEEcCCccCHHHhhhCCccEEeCCCCh-HH-----HHhcCCeeeccCChhHHHHHHH
Q 043517 674 DKLLMVQCLKQ-------KGEVVAVTGMSTRDAPSLKEADVGVSIGERSA-QF-----ARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 674 ~K~~iv~~lq~-------~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~-~~-----ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
.|..-++.+.+ ..+.|+++||+.||.+||+.|++||||| ++. +. .+..||+++...+.+++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 46555555543 3468999999999999999999999999 554 32 3457999999999999999876
Q ss_pred H
Q 043517 741 W 741 (956)
Q Consensus 741 ~ 741 (956)
+
T Consensus 266 ~ 266 (271)
T PRK03669 266 H 266 (271)
T ss_pred H
Confidence 4
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.91 E-value=7e-09 Score=112.20 Aligned_cols=65 Identities=26% Similarity=0.238 Sum_probs=57.3
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
.|..-++.+.+. .+.++++||+.||.+|++.|+.|+||+ ++.+.+|+.||+++.+++.+++.++|
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhhC
Confidence 577777777664 258999999999999999999999999 99999999999999999999988753
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.7e-08 Score=99.96 Aligned_cols=105 Identities=15% Similarity=0.162 Sum_probs=83.6
Q ss_pred HHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChh
Q 043517 594 AIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPL 673 (956)
Q Consensus 594 ~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~ 673 (956)
+|++|+ +.|+++.++||++...+..+.+++|+ +. .|... .
T Consensus 36 ~i~~Lk-~~G~~i~IvTn~~~~~~~~~l~~~gi--~~-----------------------------------~~~~~--~ 75 (154)
T TIGR01670 36 GIRCAL-KSGIEVAIITGRKAKLVEDRCKTLGI--TH-----------------------------------LYQGQ--S 75 (154)
T ss_pred HHHHHH-HCCCEEEEEECCCCHHHHHHHHHcCC--CE-----------------------------------EEecc--c
Confidence 899999 99999999999999999999999999 43 23222 2
Q ss_pred hHHHHHHHHHh----cCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhH-HHHHH
Q 043517 674 DKLLMVQCLKQ----KGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTT-IAANL 739 (956)
Q Consensus 674 ~K~~iv~~lq~----~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~-i~~~i 739 (956)
.|.+.++.+.+ ..+.++|+||+.||.+|++.|+++++|. ++.+..+..|++++.++.-++ +++++
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 34444444433 3468999999999999999999999999 888889999999998765333 55543
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.5e-08 Score=105.46 Aligned_cols=120 Identities=18% Similarity=0.186 Sum_probs=89.3
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.+++|++.+.++.++ ++|.+|+++||-...-+..+|+++|+ +..-.+.....+. +++|.
T Consensus 76 ~~l~~ga~elv~~lk-~~G~~v~iiSgg~~~lv~~ia~~lg~--d~~~an~l~~~dG-~ltG~----------------- 134 (212)
T COG0560 76 LRLTPGAEELVAALK-AAGAKVVIISGGFTFLVEPIAERLGI--DYVVANELEIDDG-KLTGR----------------- 134 (212)
T ss_pred CcCCccHHHHHHHHH-HCCCEEEEEcCChHHHHHHHHHHhCC--chheeeEEEEeCC-EEece-----------------
Confidence 679999999999999 99999999999999999999999999 5421111000011 34443
Q ss_pred eEEEe-cChhhHHHHHHHHHhc-CC---eEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeec
Q 043517 665 RVMAN-ASPLDKLLMVQCLKQK-GE---VVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVIL 728 (956)
Q Consensus 665 ~v~ar-~~p~~K~~iv~~lq~~-g~---~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~ 728 (956)
+... +..+.|.+.++.+.+. |. .+.++|||.||.|||+.||.+++++ +.+..+..|+....
T Consensus 135 -v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 135 -VVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred -eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 4443 4457888888666554 54 6999999999999999999999995 55555666665544
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.77 E-value=7.3e-08 Score=105.25 Aligned_cols=67 Identities=22% Similarity=0.146 Sum_probs=55.7
Q ss_pred hHHHHHHHHHhc----C-CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHH----hcC-Ceee--ccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----G-EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFAR----DCS-DIVI--LDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g-~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak----~~A-d~vl--~~~~~~~i~~~i~~ 741 (956)
.|..-++.+.+. . +.|+++||+.||.+|++.|++|+||+ ||.+.+| .+| +.+. ..++-+++.++|++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~ 268 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAINK 268 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHHH
Confidence 566666666543 5 89999999999999999999999999 9999999 666 6777 56778899988864
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.7e-08 Score=103.88 Aligned_cols=129 Identities=17% Similarity=0.195 Sum_probs=93.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+++|++.+.++.|+ +.|+++.++||.....+..+.+++|+ +.--..... .....++|.
T Consensus 85 ~~~~g~~~~l~~l~-~~g~~~~IvS~~~~~~~~~~l~~~~i--~~~~~~~~~-~~~~~~~~~------------------ 142 (219)
T TIGR00338 85 PLTEGAEELVKTLK-EKGYKVAVISGGFDLFAEHVKDKLGL--DAAFANRLE-VEDGKLTGL------------------ 142 (219)
T ss_pred CcCCCHHHHHHHHH-HCCCEEEEECCCcHHHHHHHHHHcCC--CceEeeEEE-EECCEEEEE------------------
Confidence 58999999999999 99999999999999999999999998 431000000 000000110
Q ss_pred EEEe-cChhhHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHH
Q 043517 666 VMAN-ASPLDKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAAN 738 (956)
Q Consensus 666 v~ar-~~p~~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~ 738 (956)
+.+. ..+..|.++++.+.++ + +.+.++||+.||.+|++.||++++++ +.+..+++||+++.++++..+..+
T Consensus 143 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 143 VEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 0111 1223366676665544 2 46899999999999999999999985 577888999999999998877654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.1e-08 Score=92.83 Aligned_cols=117 Identities=21% Similarity=0.241 Sum_probs=95.9
Q ss_pred HHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecCh
Q 043517 593 QAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASP 672 (956)
Q Consensus 593 ~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p 672 (956)
-.|+.+. ++||++.++||++...+..-|+++|| +. +|- --
T Consensus 42 ~Gik~l~-~~Gi~vAIITGr~s~ive~Ra~~LGI--~~-----------------------------------~~q--G~ 81 (170)
T COG1778 42 HGIKLLL-KSGIKVAIITGRDSPIVEKRAKDLGI--KH-----------------------------------LYQ--GI 81 (170)
T ss_pred HHHHHHH-HcCCeEEEEeCCCCHHHHHHHHHcCC--ce-----------------------------------eee--ch
Confidence 5789999 99999999999999999999999999 54 442 34
Q ss_pred hhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCC----hhHHHHHHHHhhh
Q 043517 673 LDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDEN----FTTIAANLKWGRC 744 (956)
Q Consensus 673 ~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~----~~~i~~~i~~gR~ 744 (956)
++|....+.|.++ .+.|+++||..||.|+|+..++++|+. ++.+..++.||+|+..+. ...+.++|..++.
T Consensus 82 ~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~ 160 (170)
T COG1778 82 SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQG 160 (170)
T ss_pred HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccC
Confidence 5677776666554 478999999999999999999999999 899999999999997553 5556666777776
Q ss_pred HHHHHH
Q 043517 745 VCNNIR 750 (956)
Q Consensus 745 ~~~~i~ 750 (956)
.+.-..
T Consensus 161 ~~d~~~ 166 (170)
T COG1778 161 KLDEAL 166 (170)
T ss_pred cHHHHH
Confidence 655443
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.3e-07 Score=100.97 Aligned_cols=67 Identities=21% Similarity=0.254 Sum_probs=58.2
Q ss_pred hHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCC----eeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD----IVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad----~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ | ..++++||+.||.+|++.|+.||+|+ |+.+..|+.|| +++.+++-.++.++|++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 577777777654 3 36899999999999999999999999 99999999999 88888888999999864
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.4e-07 Score=96.24 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=85.7
Q ss_pred HHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecCh
Q 043517 593 QAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASP 672 (956)
Q Consensus 593 ~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p 672 (956)
.+|+.|+ +.|+++.++||++...+..+++++|+ +. +|. ..
T Consensus 55 ~~i~~L~-~~Gi~v~I~T~~~~~~v~~~l~~lgl--~~-----------------------------------~f~--g~ 94 (183)
T PRK09484 55 YGIRCLL-TSGIEVAIITGRKSKLVEDRMTTLGI--TH-----------------------------------LYQ--GQ 94 (183)
T ss_pred HHHHHHH-HCCCEEEEEeCCCcHHHHHHHHHcCC--ce-----------------------------------eec--CC
Confidence 6999999 99999999999999999999999999 43 333 22
Q ss_pred hhHHHHHHHHH-hc---CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCC----hhHHHHHHHHhhh
Q 043517 673 LDKLLMVQCLK-QK---GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDEN----FTTIAANLKWGRC 744 (956)
Q Consensus 673 ~~K~~iv~~lq-~~---g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~----~~~i~~~i~~gR~ 744 (956)
+.|...++.+. +. .+.++|+||+.||.+|++.|+++++++ ++.+..+..||+++..+. ...+.+.+.+.|-
T Consensus 95 ~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 95 SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 34555544443 33 368999999999999999999999998 788888899999996443 3444555544433
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.5e-07 Score=93.84 Aligned_cols=127 Identities=16% Similarity=0.156 Sum_probs=91.3
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ ++ +++.++|+.....+..+.+++|+ +.--. ......+.. .
T Consensus 68 ~~~pg~~e~L~~L~-~~-~~~~IvS~~~~~~~~~~l~~~gl--~~~f~------~~~~~~~~~----------------~ 121 (205)
T PRK13582 68 DPLPGAVEFLDWLR-ER-FQVVILSDTFYEFAGPLMRQLGW--PTLFC------HSLEVDEDG----------------M 121 (205)
T ss_pred CCCCCHHHHHHHHH-hc-CCEEEEeCCcHHHHHHHHHHcCC--chhhc------ceEEECCCC----------------e
Confidence 36799999999999 98 99999999999999999999998 42000 000010000 0
Q ss_pred EEE--ecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCe-eeccCChhHHHHHHHH
Q 043517 666 VMA--NASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDI-VILDENFTTIAANLKW 741 (956)
Q Consensus 666 v~a--r~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~-vl~~~~~~~i~~~i~~ 741 (956)
+.. ...|+.|...++.++..++.+.|+|||.||.+|.+.|++|++.+ ...+.....++. ++. ++..+.+.+.+
T Consensus 122 i~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l~~ 197 (205)
T PRK13582 122 ITGYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAIDK 197 (205)
T ss_pred EECccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHHHH
Confidence 000 12467888899999888999999999999999999999999987 444444445565 444 66666665544
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.4e-06 Score=91.98 Aligned_cols=153 Identities=14% Similarity=0.092 Sum_probs=99.6
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeech-h--------------
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEAS-V-------------- 648 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~-~-------------- 648 (956)
..+..|++.+++++++ +.|+.++++|||+...+..+.+++++ ..++ -. ..++++.+..+. .
T Consensus 19 ~~~~~~~~~~~i~~~~-~~gi~fv~aTGR~~~~~~~~~~~~~~-~~p~-~~-I~~NGa~I~~~~~~~~~~~~~~~~~~~~ 94 (249)
T TIGR01485 19 DNQALLRLNALLEDHR-GEDSLLVYSTGRSPHSYKELQKQKPL-LTPD-IW-VTSVGSEIYYGGAEVPDQHWAEYLSEKW 94 (249)
T ss_pred ChHHHHHHHHHHHHhh-ccCceEEEEcCCCHHHHHHHHhcCCC-CCCC-EE-EEcCCceEEeCCCCcCCHHHHHHHhccc
Confidence 3457799999999999 99999999999999999999999998 3221 00 000111111000 0
Q ss_pred ----h-------hc-----------------CCH-------HHHHhhhc----cceE-EE-----ecCh--hhHHHHHHH
Q 043517 649 ----F-------RS-----------------SSE-------ETRSLMVD----NVRV-MA-----NASP--LDKLLMVQC 681 (956)
Q Consensus 649 ----~-------~~-----------------~~~-------~~~~~~~~----~~~v-~a-----r~~p--~~K~~iv~~ 681 (956)
+ .. ... +++.+.+. .+.+ .+ ...| ..|...++.
T Consensus 95 ~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~ 174 (249)
T TIGR01485 95 QRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQY 174 (249)
T ss_pred CHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHH
Confidence 0 00 000 11111111 1111 11 2233 368777877
Q ss_pred HHhc----CCeEEEEcCCccCHHHhhh-CCccEEeCCCChHHHHhcCC-------eeeccCChhHHHHHHHH
Q 043517 682 LKQK----GEVVAVTGMSTRDAPSLKE-ADVGVSIGERSAQFARDCSD-------IVILDENFTTIAANLKW 741 (956)
Q Consensus 682 lq~~----g~~v~~iGDG~ND~~al~~-AdvGIamg~~~~~~ak~~Ad-------~vl~~~~~~~i~~~i~~ 741 (956)
+.+. .+.|+++||+.||.+|++. ++.|+||+ |+.+..|+.++ ++.....-+++.+++++
T Consensus 175 l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 175 LLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred HHHHcCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 7654 3689999999999999998 67999999 99998887543 66666677888888764
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.37 E-value=9.8e-05 Score=86.19 Aligned_cols=98 Identities=23% Similarity=0.255 Sum_probs=74.3
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
|++|++.+.+++++ +.|++++++|+-+...+..+++.+|+ .+. ++.++.
T Consensus 72 p~~pga~e~L~~lk-~~G~~v~LaTas~~~~a~~i~~~lGl-Fd~------------Vigsd~----------------- 120 (479)
T PRK08238 72 PYNEEVLDYLRAER-AAGRKLVLATASDERLAQAVAAHLGL-FDG------------VFASDG----------------- 120 (479)
T ss_pred CCChhHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHcCC-CCE------------EEeCCC-----------------
Confidence 47899999999999 99999999999999999999999997 432 222111
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQ 717 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~ 717 (956)
..++.|+.|.+.++..... +.+.++||..||.++++.|+-.++++ .+..
T Consensus 121 -~~~~kg~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~ 169 (479)
T PRK08238 121 -TTNLKGAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG-ASPG 169 (479)
T ss_pred -ccccCCchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC-CCHH
Confidence 1245667776554432222 22678899999999999999999997 4444
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.6e-06 Score=89.93 Aligned_cols=117 Identities=15% Similarity=0.093 Sum_probs=81.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+++|++.+.++.|+ +.|+++.++|+.....+..+++.+|+ +.. ....+...+-... ...
T Consensus 80 ~~~~g~~e~l~~l~-~~g~~~~IvS~~~~~~~~~~l~~~g~--~~~--------~~~~~~~~~~g~~----------~p~ 138 (201)
T TIGR01491 80 SLRDYAEELVRWLK-EKGLKTAIVSGGIMCLAKKVAEKLNP--DYV--------YSNELVFDEKGFI----------QPD 138 (201)
T ss_pred CCCccHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHHHhCC--CeE--------EEEEEEEcCCCeE----------ecc
Confidence 58999999999999 99999999999999999999999998 430 0011110000000 000
Q ss_pred EEEecChhhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCC
Q 043517 666 VMANASPLDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD 724 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad 724 (956)
.+....|..|.+.++.+.++ .+.++++||+.||.+|++.||++++++ .+....+.++|
T Consensus 139 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 139 GIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred eeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 12224456677777666543 356999999999999999999999997 43334444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.33 E-value=8.7e-07 Score=86.70 Aligned_cols=106 Identities=12% Similarity=0.153 Sum_probs=74.9
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCC---CCCCCcceeeechhhhcCCHHHHHhhhcc
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAED---HSNGYDAAVIEASVFRSSSEETRSLMVDN 663 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~---~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 663 (956)
+-|++++.++.|+ +.|.+++++||.-..-+..+|.++|| +..... ...+.......+++..
T Consensus 89 lT~Gi~eLv~~L~-~~~~~v~liSGGF~~~i~~Va~~Lgi--~~~n~yAN~l~fd~~Gk~~gfd~~~------------- 152 (227)
T KOG1615|consen 89 LTPGIRELVSRLH-ARGTQVYLISGGFRQLIEPVAEQLGI--PKSNIYANELLFDKDGKYLGFDTNE------------- 152 (227)
T ss_pred cCCCHHHHHHHHH-HcCCeEEEEcCChHHHHHHHHHHhCC--cHhhhhhheeeeccCCcccccccCC-------------
Confidence 5699999999999 99999999999999999999999999 331000 0000000000000000
Q ss_pred ceEEEecChhhHHHHHHHHHhc--CCeEEEEcCCccCHHHhhhCCccEEeC
Q 043517 664 VRVMANASPLDKLLMVQCLKQK--GEVVAVTGMSTRDAPSLKEADVGVSIG 712 (956)
Q Consensus 664 ~~v~ar~~p~~K~~iv~~lq~~--g~~v~~iGDG~ND~~al~~AdvGIamg 712 (956)
.-....-|.+++..+++. -+.++|+|||.||.+|+..||.=|+.|
T Consensus 153 ----ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 153 ----PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ----ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 011234688999988875 358999999999999999988888766
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.2e-06 Score=90.55 Aligned_cols=42 Identities=12% Similarity=0.181 Sum_probs=38.2
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCC
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGL 626 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi 626 (956)
.+..-+++.++|++|+ +.|++++++|||....+..+.+++|+
T Consensus 13 ~~~~~~~~~~ai~~l~-~~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 13 PGYEPGPAREALEELK-DLGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred CCCCchHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 3455678999999999 99999999999999999999999997
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.21 E-value=6.9e-06 Score=94.38 Aligned_cols=67 Identities=19% Similarity=0.130 Sum_probs=53.5
Q ss_pred hHHHHHHHHHhc-------CCeEEEEcCCccCHHHhhhCC-ccEEeCCCChHHHHhcC--------Ceee-ccCChhHHH
Q 043517 674 DKLLMVQCLKQK-------GEVVAVTGMSTRDAPSLKEAD-VGVSIGERSAQFARDCS--------DIVI-LDENFTTIA 736 (956)
Q Consensus 674 ~K~~iv~~lq~~-------g~~v~~iGDG~ND~~al~~Ad-vGIamg~~~~~~ak~~A--------d~vl-~~~~~~~i~ 736 (956)
.|..-++.+.++ .+.++++||+.||.+||+.|+ .||||+ |+.+..|+.+ +++. .+++-++|.
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~ 253 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGII 253 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHH
Confidence 588777777655 258999999999999999999 699999 9999888743 4443 355678888
Q ss_pred HHHHH
Q 043517 737 ANLKW 741 (956)
Q Consensus 737 ~~i~~ 741 (956)
++|++
T Consensus 254 ~al~~ 258 (413)
T PLN02382 254 QAIGH 258 (413)
T ss_pred HHHHH
Confidence 88765
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.21 E-value=9e-06 Score=85.39 Aligned_cols=136 Identities=10% Similarity=0.010 Sum_probs=88.3
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
-+++|++.+.++.|+ +.|+++.++||.....+..+.+.++. ... ........+|..+.... ...
T Consensus 69 ~~l~pg~~e~l~~l~-~~g~~~~IvS~~~~~~i~~il~~~~~-~~~------i~~n~~~~~~~~~~~~~--------p~~ 132 (214)
T TIGR03333 69 AEIREGFREFVAFIN-EHGIPFYVISGGMDFFVYPLLEGIVE-KDR------IYCNEADFSNEYIHIDW--------PHP 132 (214)
T ss_pred CcccccHHHHHHHHH-HCCCeEEEECCCcHHHHHHHHHhhCC-ccc------EEeceeEeeCCeeEEeC--------CCC
Confidence 368999999999999 99999999999999999998888754 111 00011222232221100 000
Q ss_pred eEE--E-ecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHh--cCCeeeccCChhHHHHHH
Q 043517 665 RVM--A-NASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARD--CSDIVILDENFTTIAANL 739 (956)
Q Consensus 665 ~v~--a-r~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~--~Ad~vl~~~~~~~i~~~i 739 (956)
..+ . .+ ...|..+++.++...+.++|+|||.||.+|++.||+++|=+ .-.+..++ .+.+.. ++|..+...+
T Consensus 133 ~~~~~~~~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l 208 (214)
T TIGR03333 133 CDGTCQNQC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKEL 208 (214)
T ss_pred CccccccCC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHH
Confidence 000 0 11 34699999999888888999999999999999999988744 22221221 122222 4677777766
Q ss_pred H
Q 043517 740 K 740 (956)
Q Consensus 740 ~ 740 (956)
+
T Consensus 209 ~ 209 (214)
T TIGR03333 209 E 209 (214)
T ss_pred H
Confidence 4
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.1e-05 Score=83.23 Aligned_cols=128 Identities=15% Similarity=0.157 Sum_probs=83.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCccee------eechhhhcCCHHHHHh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAV------IEASVFRSSSEETRSL 659 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~------i~g~~~~~~~~~~~~~ 659 (956)
+++|++.+.++.|+ +.|+++.++||.....+..+++.+|+ +... ... .... +.|.....
T Consensus 84 ~l~pg~~e~l~~l~-~~g~~~~IvS~~~~~~i~~~l~~~gi--~~~~---~~~-~~~~~~~~g~~~g~~~~~-------- 148 (224)
T PLN02954 84 RLSPGIPELVKKLR-ARGTDVYLVSGGFRQMIAPVAAILGI--PPEN---IFA-NQILFGDSGEYAGFDENE-------- 148 (224)
T ss_pred CCCccHHHHHHHHH-HCCCEEEEECCCcHHHHHHHHHHhCC--Chhh---EEE-eEEEEcCCCcEECccCCC--------
Confidence 37899999999999 99999999999999999999999999 4200 000 0000 01100000
Q ss_pred hhccceEEEecChhhHHHHHHHHHhc--CCeEEEEcCCccCHHHhhh--CCccEEeCCCC-hHHHHhcCCeeeccCChhH
Q 043517 660 MVDNVRVMANASPLDKLLMVQCLKQK--GEVVAVTGMSTRDAPSLKE--ADVGVSIGERS-AQFARDCSDIVILDENFTT 734 (956)
Q Consensus 660 ~~~~~~v~ar~~p~~K~~iv~~lq~~--g~~v~~iGDG~ND~~al~~--AdvGIamg~~~-~~~ak~~Ad~vl~~~~~~~ 734 (956)
. ...+..|.+.++.+.++ .+.++++||+.||..|.+. ++++++.|... .+.....+|+++. ++..
T Consensus 149 ------~--~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~e 218 (224)
T PLN02954 149 ------P--TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQD 218 (224)
T ss_pred ------c--ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHH
Confidence 0 01123477777766654 3579999999999999888 45556555221 2334456899887 5665
Q ss_pred HHHH
Q 043517 735 IAAN 738 (956)
Q Consensus 735 i~~~ 738 (956)
+.+.
T Consensus 219 l~~~ 222 (224)
T PLN02954 219 LIEV 222 (224)
T ss_pred HHHh
Confidence 5543
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.11 E-value=2.2e-05 Score=82.91 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=35.9
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCC
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGL 626 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi 626 (956)
.-+.++++|++++ ++|++++++|||+...+..+.+++|+
T Consensus 17 ~~~~~~~~l~~l~-~~gi~~~i~TgR~~~~~~~~~~~l~~ 55 (221)
T TIGR02463 17 DWQPAAPWLTRLQ-EAGIPVILCTSKTAAEVEYLQKALGL 55 (221)
T ss_pred CcHHHHHHHHHHH-HCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 3345899999999 99999999999999999999999998
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.09 E-value=9.4e-06 Score=83.44 Aligned_cols=92 Identities=20% Similarity=0.226 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEE
Q 043517 589 SEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMA 668 (956)
Q Consensus 589 ~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~a 668 (956)
+++.+.|+.++ ++|++++++||.....+..+++.+|+ +. .....+.. ..+- ......
T Consensus 92 ~~~~e~i~~~~-~~~~~v~IvS~~~~~~i~~~~~~~~i--~~---------~~v~~~~~-~~~~----------~~~~~~ 148 (192)
T PF12710_consen 92 PDAMELIRELK-DNGIKVVIVSGSPDEIIEPIAERLGI--DD---------DNVIGNEL-FDNG----------GGIFTG 148 (192)
T ss_dssp TTHHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTS--SE---------GGEEEEEE-ECTT----------CCEEEE
T ss_pred hhHHHHHHHHH-HCCCEEEEECCCcHHHHHHHHHHcCC--Cc---------eEEEEEee-eecc----------cceeee
Confidence 77789999999 99999999999999999999999999 43 11111111 1000 112445
Q ss_pred ecChh-h--HHHHHHHH------HhcCCeEEEEcCCccCHHHhh
Q 043517 669 NASPL-D--KLLMVQCL------KQKGEVVAVTGMSTRDAPSLK 703 (956)
Q Consensus 669 r~~p~-~--K~~iv~~l------q~~g~~v~~iGDG~ND~~al~ 703 (956)
+.++. + |.+.++.+ +.....++++|||.||.+|||
T Consensus 149 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 149 RITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred eECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 55554 4 99999999 345789999999999999986
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.9e-05 Score=83.23 Aligned_cols=145 Identities=11% Similarity=0.076 Sum_probs=88.0
Q ss_pred cCcHHHHHHHHHHHhh-CCCEEEEEcCCCHHHHHHHHHhcCCc-ccCCCCCCC----------C----------------
Q 043517 586 AYASEVKQAIEDCRES-AGIKIKLILEDDINIARLIAINSGLI-LKPGAEDHS----------N---------------- 637 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~-~Gi~v~m~TGd~~~ta~~ia~~~Gi~-~~~~~~~~~----------~---------------- 637 (956)
.+-+++.++|++|+ + .|++++++|||+...+..+.+.+++. +..++.... .
T Consensus 36 ~i~~~~~~~L~~L~-~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~ 114 (266)
T PRK10187 36 VVPDNILQGLQLLA-TANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTAL 114 (266)
T ss_pred cCCHHHHHHHHHHH-hCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHh
Confidence 45589999999999 7 79999999999999999888877641 111111000 0
Q ss_pred ----------CCcceeeechhhhcCCHHHHHhh-------hccce-----EEEecCh--hhHHHHHHHHHhc----CCeE
Q 043517 638 ----------GYDAAVIEASVFRSSSEETRSLM-------VDNVR-----VMANASP--LDKLLMVQCLKQK----GEVV 689 (956)
Q Consensus 638 ----------~~~~~~i~g~~~~~~~~~~~~~~-------~~~~~-----v~ar~~p--~~K~~iv~~lq~~----g~~v 689 (956)
.....+........ ..+.+..+ ..... -+....| .+|...++.+.+. ...+
T Consensus 115 ~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 115 AQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred ccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 00011111111100 11111111 11111 1223333 3787777776554 3679
Q ss_pred EEEcCCccCHHHhhhC----CccEEeCCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 690 AVTGMSTRDAPSLKEA----DVGVSIGERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 690 ~~iGDG~ND~~al~~A----dvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
+++||+.||.+||+.+ +.||+|| ++. ..|++.+. +...+...+
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 9999999999999999 9999999 664 44778777 555565554
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.9e-05 Score=80.65 Aligned_cols=109 Identities=15% Similarity=0.095 Sum_probs=76.8
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhcc
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDN 663 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 663 (956)
..++++++.+.++.++ +.|++++++||.....+..+++.+|+ +.--............+|...
T Consensus 85 ~~~~~~~~~~~l~~l~-~~g~~v~ivS~s~~~~v~~~~~~lg~--~~~~~~~l~~~~~g~~~g~~~-------------- 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHK-AEGHTIVLVSASLTILVKPLARILGI--DNAIGTRLEESEDGIYTGNID-------------- 147 (202)
T ss_pred HHhccHHHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHHHcCC--cceEecceEEcCCCEEeCCcc--------------
Confidence 3468999999999999 99999999999999999999999999 431000000000001122100
Q ss_pred ceEEEecChhhHHHHHHHHHh-cC---CeEEEEcCCccCHHHhhhCCccEEeC
Q 043517 664 VRVMANASPLDKLLMVQCLKQ-KG---EVVAVTGMSTRDAPSLKEADVGVSIG 712 (956)
Q Consensus 664 ~~v~ar~~p~~K~~iv~~lq~-~g---~~v~~iGDG~ND~~al~~AdvGIamg 712 (956)
--.+.++.|.+.++.+.+ .+ +.+.++||+.+|.+|++.|+.++++.
T Consensus 148 ---~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 ---GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ---CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 012345778777766544 33 37899999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.4e-05 Score=81.09 Aligned_cols=99 Identities=15% Similarity=0.095 Sum_probs=69.7
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCC-CCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHS-NGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++|++.+.++.++ +.|++++++||.....+..+++.+|+ +.--.... .+... .++|....
T Consensus 74 ~~~g~~~~l~~l~-~~g~~~~ivS~~~~~~i~~~~~~~g~--~~~~~~~~~~~~~g-~~~g~~~~--------------- 134 (177)
T TIGR01488 74 LRPGARELISWLK-ERGIDTVIVSGGFDFFVEPVAEKLGI--DDVFANRLEFDDNG-LLTGPIEG--------------- 134 (177)
T ss_pred cCcCHHHHHHHHH-HCCCEEEEECCCcHHHHHHHHHHcCC--chheeeeEEECCCC-EEeCccCC---------------
Confidence 6799999999999 99999999999999999999999998 42100000 00000 11221000
Q ss_pred EEEecChhhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhC
Q 043517 666 VMANASPLDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEA 705 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~A 705 (956)
-....+..|.+.++.+.+. .+.++++|||.||.+|++.|
T Consensus 135 -~~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 135 -QVNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred -cccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 0124567899888887654 35799999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=3.6e-05 Score=81.18 Aligned_cols=135 Identities=10% Similarity=0.010 Sum_probs=84.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+++|++.+.++.|+ +.|+++.++||-....+..+.+++ + .... . . ......+|..+.... +...
T Consensus 74 ~l~pG~~e~l~~l~-~~g~~~~IvS~~~~~~i~~il~~~-~--~~~~-i-~--~n~~~~~~~~~~~~k--------p~p~ 137 (219)
T PRK09552 74 EIREGFHEFVQFVK-ENNIPFYVVSGGMDFFVYPLLQGL-I--PKEQ-I-Y--CNGSDFSGEYITITW--------PHPC 137 (219)
T ss_pred CcCcCHHHHHHHHH-HcCCeEEEECCCcHHHHHHHHHHh-C--CcCc-E-E--EeEEEecCCeeEEec--------cCCc
Confidence 58999999999999 999999999999999999999988 7 3210 0 0 001112222111000 0000
Q ss_pred E--E-EecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHh--cCCeeeccCChhHHHHHHH
Q 043517 666 V--M-ANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARD--CSDIVILDENFTTIAANLK 740 (956)
Q Consensus 666 v--~-ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~--~Ad~vl~~~~~~~i~~~i~ 740 (956)
. + .++ ...|..+++.++.....+.++|||.||.+|.+.||+.++-+ .-.+.+++ .+.+... +|..+...++
T Consensus 138 ~~~~~~~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~~--~f~ei~~~l~ 213 (219)
T PRK09552 138 DEHCQNHC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPFE--TFHDVQTELK 213 (219)
T ss_pred cccccccC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCccccC--CHHHHHHHHH
Confidence 0 0 001 12488888888877788999999999999999999977632 11122222 2333333 6776666553
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=5.1e-05 Score=80.27 Aligned_cols=127 Identities=20% Similarity=0.228 Sum_probs=89.4
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.++.|++.+.++.|+ +.|+++.++||........+.+++|+ ... ...++++..
T Consensus 92 ~~~~~g~~~~l~~l~-~~g~~~~i~S~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~---------------- 144 (226)
T PRK13222 92 SRLYPGVKETLAALK-AAGYPLAVVTNKPTPFVAPLLEALGI--ADY--------FSVVIGGDS---------------- 144 (226)
T ss_pred CccCCCHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHcCC--ccC--------ccEEEcCCC----------------
Confidence 357899999999999 99999999999999999999999998 431 112222211
Q ss_pred eEEEecC--hhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc-cEEeC--CC-ChHHHHhcCCeeeccCChhHHHHH
Q 043517 665 RVMANAS--PLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV-GVSIG--ER-SAQFARDCSDIVILDENFTTIAAN 738 (956)
Q Consensus 665 ~v~ar~~--p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIamg--~~-~~~~ak~~Ad~vl~~~~~~~i~~~ 738 (956)
+.+.. |+--..+.+.++...+.++++||+.||+.+.+.||+ +|.+. .. ..+.....+++++. ++..+...
T Consensus 145 --~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 220 (226)
T PRK13222 145 --LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPL 220 (226)
T ss_pred --CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHH
Confidence 11122 333345555555556789999999999999999999 45553 11 22344456888875 88888887
Q ss_pred HHHh
Q 043517 739 LKWG 742 (956)
Q Consensus 739 i~~g 742 (956)
+.++
T Consensus 221 l~~~ 224 (226)
T PRK13222 221 LGLA 224 (226)
T ss_pred HHHh
Confidence 7653
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.3e-05 Score=80.19 Aligned_cols=114 Identities=12% Similarity=0.040 Sum_probs=76.7
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
-++++++.+.++.|+ +.|+++.++|+.+...+..+.+..|+ ..- -..++++....+ .+..+.-...++
T Consensus 71 ~~l~~g~~~ll~~l~-~~g~~~~i~S~~~~~~~~~~l~~~~l--~~~--------f~~i~~~~~~~~-~~g~~~~~~~~~ 138 (188)
T TIGR01489 71 APIDPGFKEFIAFIK-EHGIDFIVISDGNDFFIDPVLEGIGE--KDV--------FIEIYSNPASFD-NDGRHIVWPHHC 138 (188)
T ss_pred CCCCccHHHHHHHHH-HcCCcEEEEeCCcHHHHHHHHHHcCC--hhh--------eeEEeccCceEC-CCCcEEEecCCC
Confidence 478999999999999 99999999999999999999999998 331 111222111100 000000000000
Q ss_pred eEEEe-cChhhHHHHHHHHHhc-CCeEEEEcCCccCHHHhhhCCccEE
Q 043517 665 RVMAN-ASPLDKLLMVQCLKQK-GEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 665 ~v~ar-~~p~~K~~iv~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
..+.. .....|.++++.+++. .+.+.++|||.||..|.+.||+-.|
T Consensus 139 ~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 139 HGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 01111 1223589999999887 8899999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=8.1e-05 Score=88.20 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=36.1
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCC
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGL 626 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi 626 (956)
.-+.+.++|++++ ++|+.++++|||....+..+++++|+
T Consensus 434 i~~~t~eAL~~L~-ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLK-DKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHH-HcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4467899999999 99999999999999999999999997
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.85 E-value=6.5e-05 Score=79.22 Aligned_cols=128 Identities=23% Similarity=0.258 Sum_probs=92.2
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhcc
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDN 663 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 663 (956)
...+-|+++++++.|+ ++|++..++|+++...+..+.+..|+ ..- -..++.+....
T Consensus 87 ~~~~~~gv~e~L~~L~-~~g~~l~i~T~k~~~~~~~~l~~~gl--~~~--------F~~i~g~~~~~------------- 142 (220)
T COG0546 87 ESRLFPGVKELLAALK-SAGYKLGIVTNKPERELDILLKALGL--ADY--------FDVIVGGDDVP------------- 142 (220)
T ss_pred cCccCCCHHHHHHHHH-hCCCeEEEEeCCcHHHHHHHHHHhCC--ccc--------cceEEcCCCCC-------------
Confidence 4457799999999999 99999999999999999999999999 430 11111111110
Q ss_pred ceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCC---ccEEeCCC-ChHHHHhcCCeeeccCChhHHHHHH
Q 043517 664 VRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEAD---VGVSIGER-SAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 664 ~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Ad---vGIamg~~-~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+......+.+....+.++||||..+|..|=+.|+ +|+..|.+ ........+|+++. ++..+...+
T Consensus 143 ---~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l 217 (220)
T COG0546 143 ---PPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALL 217 (220)
T ss_pred ---CCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHH
Confidence 1112455555666665555457999999999999999999 66777742 34566667999988 777666554
Q ss_pred H
Q 043517 740 K 740 (956)
Q Consensus 740 ~ 740 (956)
.
T Consensus 218 ~ 218 (220)
T COG0546 218 A 218 (220)
T ss_pred h
Confidence 3
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0001 Score=76.71 Aligned_cols=125 Identities=17% Similarity=0.138 Sum_probs=84.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.+++|+ +.|+++.++|+.....+....+..|+ ..- -..++.+.+.
T Consensus 75 ~~~~g~~~~L~~L~-~~g~~~~i~Sn~~~~~~~~~l~~~~l--~~~--------f~~i~~~~~~---------------- 127 (205)
T TIGR01454 75 EVFPGVPELLAELR-ADGVGTAIATGKSGPRARSLLEALGL--LPL--------FDHVIGSDEV---------------- 127 (205)
T ss_pred ccCCCHHHHHHHHH-HCCCeEEEEeCCchHHHHHHHHHcCC--hhh--------eeeEEecCcC----------------
Confidence 67899999999999 99999999999999999999999998 320 1111111100
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE-e--CC-CChHHHHhcCCeeeccCChhHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS-I--GE-RSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-m--g~-~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...+-.|+--..+++.++-..+.++|+||+.+|..+-+.||+... + |. +..+..+..+|+++. ++..+..++
T Consensus 128 ~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 128 PRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred CCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 001112333344444444445789999999999999999999743 2 21 223345667899876 666665544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00016 Score=77.79 Aligned_cols=54 Identities=13% Similarity=0.195 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHhcCCeEEEEcC----CccCHHHhhhC-CccEEeCCCChHHHHhcCCeee
Q 043517 673 LDKLLMVQCLKQKGEVVAVTGM----STRDAPSLKEA-DVGVSIGERSAQFARDCSDIVI 727 (956)
Q Consensus 673 ~~K~~iv~~lq~~g~~v~~iGD----G~ND~~al~~A-dvGIamg~~~~~~ak~~Ad~vl 727 (956)
-+|..-++.|.++.+.|+++|| |.||.+||+.| -.|++++ |+.+..|..|.++.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4688888888877889999999 99999999976 5777777 89998887766543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00018 Score=77.10 Aligned_cols=41 Identities=12% Similarity=0.002 Sum_probs=37.9
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCC
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGL 626 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi 626 (956)
+..-+.++++|++|+ +.||.++++||+.......+.+++|+
T Consensus 17 ~~~~~~a~~aL~~Lk-~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 17 FNSYGAARQALAALE-RRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred CcCCHHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 345677999999999 99999999999999999999999998
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.72 E-value=6.9e-05 Score=71.68 Aligned_cols=117 Identities=20% Similarity=0.140 Sum_probs=75.8
Q ss_pred eecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhh
Q 043517 582 RLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMV 661 (956)
Q Consensus 582 ~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 661 (956)
.-..++++++.+.+++|+ +.|++++++||+....+....+++|+ ... ...++.................
T Consensus 20 ~~~~~~~~~~~~~l~~l~-~~g~~i~ivS~~~~~~~~~~~~~~~~--~~~--------~~~i~~~~~~~~~~~~~~~~~~ 88 (139)
T cd01427 20 IEELELYPGVKEALKELK-EKGIKLALATNKSRREVLELLEELGL--DDY--------FDPVITSNGAAIYYPKEGLFLG 88 (139)
T ss_pred cccCCcCcCHHHHHHHHH-HCCCeEEEEeCchHHHHHHHHHHcCC--chh--------hhheeccchhhhhccccccccc
Confidence 445688999999999999 99999999999999999999999997 321 1111111110000000000001
Q ss_pred ccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhC-CccE
Q 043517 662 DNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEA-DVGV 709 (956)
Q Consensus 662 ~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~A-dvGI 709 (956)
.....+.+-.++.+..+.+.+....+.++++||+.+|+.|.+.+ .-+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 89 GGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred ccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 11113334456666667777666667899999999999999984 3334
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00063 Score=84.65 Aligned_cols=179 Identities=12% Similarity=0.119 Sum_probs=105.8
Q ss_pred HHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeee--cccCcHHHHHHHHHHHhh-CCCEEEEEcC
Q 043517 535 FNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRL--KSAYASEVKQAIEDCRES-AGIKIKLILE 611 (956)
Q Consensus 535 ~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~--~d~lr~~~~~~I~~l~~~-~Gi~v~m~TG 611 (956)
.+.....|.. .-.|.+++-+ |.+++....- ...+.+++.+++++|. + .|+.|+++||
T Consensus 480 ~~~~~~~y~~--~~~rLi~~D~-----------------DGTL~~~~~~~~~~~~~~~~~~~L~~L~-~d~g~~V~ivSG 539 (726)
T PRK14501 480 AEEIIARYRA--ASRRLLLLDY-----------------DGTLVPFAPDPELAVPDKELRDLLRRLA-ADPNTDVAIISG 539 (726)
T ss_pred HHHHHHHHHh--ccceEEEEec-----------------CccccCCCCCcccCCCCHHHHHHHHHHH-cCCCCeEEEEeC
Confidence 4445556655 5668887776 6677654211 1236789999999999 7 6999999999
Q ss_pred CCHHHHHHHHHhcCCc-ccCCCCCCCC-C------------------------------------Ccceeeec----hhh
Q 043517 612 DDINIARLIAINSGLI-LKPGAEDHSN-G------------------------------------YDAAVIEA----SVF 649 (956)
Q Consensus 612 d~~~ta~~ia~~~Gi~-~~~~~~~~~~-~------------------------------------~~~~~i~g----~~~ 649 (956)
|............++. +..++..... + ....+..- .++
T Consensus 540 R~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~ 619 (726)
T PRK14501 540 RDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPEL 619 (726)
T ss_pred CCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHH
Confidence 9999888877655531 1111110000 0 00000000 000
Q ss_pred hcCCHHHHH----hhhcc--ceEE-----EecCh--hhHHHHHHHHHhc--CCeEEEEcCCccCHHHhhhC---CccEEe
Q 043517 650 RSSSEETRS----LMVDN--VRVM-----ANASP--LDKLLMVQCLKQK--GEVVAVTGMSTRDAPSLKEA---DVGVSI 711 (956)
Q Consensus 650 ~~~~~~~~~----~~~~~--~~v~-----ar~~p--~~K~~iv~~lq~~--g~~v~~iGDG~ND~~al~~A---dvGIam 711 (956)
.....+++. ..+.. ..+. ....| -+|...++.+.+. ...++++||+.||.+||+.+ +.+|+|
T Consensus 620 ~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~v 699 (726)
T PRK14501 620 GEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKV 699 (726)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEE
Confidence 000001111 11111 1111 12333 4788888888764 35899999999999999986 689999
Q ss_pred CCCChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 712 GERSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 712 g~~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
| ++ +.+|++.+.++ ..+...++
T Consensus 700 G-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 700 G-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred C-CC----CCcceEeCCCH--HHHHHHHH
Confidence 8 54 56788998854 44655553
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00069 Score=72.66 Aligned_cols=68 Identities=22% Similarity=0.201 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHH-----HHhcC---C-eeeccCChhHHHHHH
Q 043517 673 LDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQF-----ARDCS---D-IVILDENFTTIAANL 739 (956)
Q Consensus 673 ~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~-----ak~~A---d-~vl~~~~~~~i~~~i 739 (956)
..|...++.++++ .+.|+++||+.||.+||..++-||.+| |+.+. ..... . +....+.-.||.+.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 4688888888876 257888999999999999999999999 88877 22222 2 334444555666665
Q ss_pred HH
Q 043517 740 KW 741 (956)
Q Consensus 740 ~~ 741 (956)
++
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0006 Score=71.55 Aligned_cols=124 Identities=16% Similarity=0.143 Sum_probs=83.7
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.|++.+.++.|+ +.|+++.++|+.....+..+.+..|+ ..- -..++.+....
T Consensus 83 ~~~g~~~~l~~L~-~~g~~~~i~S~~~~~~~~~~l~~~gl--~~~--------f~~i~~~~~~~---------------- 135 (214)
T PRK13288 83 EYETVYETLKTLK-KQGYKLGIVTTKMRDTVEMGLKLTGL--DEF--------FDVVITLDDVE---------------- 135 (214)
T ss_pred cCcCHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHcCC--hhc--------eeEEEecCcCC----------------
Confidence 6799999999999 99999999999999999999999999 430 11222211110
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc---EEeCCCChH-HHHhcCCeeeccCChhHHHHHH
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG---VSIGERSAQ-FARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG---Iamg~~~~~-~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+--.++.+.++...+.++++||+.+|..+-++|++- ++-|....+ .....+|+++. ++..+.+.+
T Consensus 136 ~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 136 HAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred CCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 011233333455555544457899999999999999999985 323311222 23446888877 777776654
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00057 Score=71.08 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=35.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcC
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSG 625 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~G 625 (956)
++.+++.+++++|+ +.|++++++|||....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~-~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLR-EAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHHhCC
Confidence 47799999999999 9999999999999999999988744
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00038 Score=72.85 Aligned_cols=121 Identities=17% Similarity=0.195 Sum_probs=80.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+.++.|+ ... -..++.+..
T Consensus 85 ~~~~g~~~~L~~l~-~~g~~~~i~S~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~----------------- 136 (213)
T TIGR01449 85 SVFPGVEATLGALR-AKGLRLGLVTNKPTPLARPLLELLGL--AKY--------FSVLIGGDS----------------- 136 (213)
T ss_pred ccCCCHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHcCc--Hhh--------CcEEEecCC-----------------
Confidence 47899999999999 99999999999999999999999998 320 111222111
Q ss_pred EEEecCh--hhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE-e--CCCC-hHHHHhcCCeeeccCChhHHHH
Q 043517 666 VMANASP--LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS-I--GERS-AQFARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 666 v~ar~~p--~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-m--g~~~-~~~ak~~Ad~vl~~~~~~~i~~ 737 (956)
..+..| +-=....+.+.-..+.++++||+.+|+.+.+.|++-.. + |... .+.....||+++. ++..+..
T Consensus 137 -~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 137 -LAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred -CCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 111223 22234444444345679999999999999999998754 3 2111 1222346888776 5555543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00057 Score=74.54 Aligned_cols=127 Identities=14% Similarity=0.169 Sum_probs=83.6
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.++.|++.++++.|+ +.|+++.++|+.+...+..+.++.|+ ... ...+++++...
T Consensus 100 ~~~~~g~~e~L~~Lk-~~g~~l~ivTn~~~~~~~~~l~~~~i--~~~--------f~~i~~~d~~~-------------- 154 (272)
T PRK13223 100 TVVYPGVRDTLKWLK-KQGVEMALITNKPERFVAPLLDQMKI--GRY--------FRWIIGGDTLP-------------- 154 (272)
T ss_pred CccCCCHHHHHHHHH-HCCCeEEEEECCcHHHHHHHHHHcCc--Hhh--------CeEEEecCCCC--------------
Confidence 367899999999999 99999999999999999999999998 430 11122211100
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEe--CCC-ChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSI--GER-SAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iam--g~~-~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
...-.|+--..+.+.+.-..+.++++||+.||+.+.+.|++. +++ |.+ ..+.....+|+++. ++..+.+++.
T Consensus 155 --~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~~ 230 (272)
T PRK13223 155 --QKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGCA 230 (272)
T ss_pred --CCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHHh
Confidence 001112222333333333357899999999999999999974 444 311 22234457898886 7777776544
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00079 Score=71.09 Aligned_cols=123 Identities=15% Similarity=0.117 Sum_probs=79.4
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
-++.|++.++++.|+ +.|+++.++|+........+.+++|+ ..- -..++++....
T Consensus 91 ~~~~~g~~~~l~~l~-~~g~~~~i~S~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~-------------- 145 (222)
T PRK10826 91 RPLLPGVREALALCK-AQGLKIGLASASPLHMLEAVLTMFDL--RDY--------FDALASAEKLP-------------- 145 (222)
T ss_pred CCCCCCHHHHHHHHH-HCCCeEEEEeCCcHHHHHHHHHhCcc--hhc--------ccEEEEcccCC--------------
Confidence 357899999999999 99999999999999999999999998 431 11222221110
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCCh---HHHHhcCCeeeccCChhHHH
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSA---QFARDCSDIVILDENFTTIA 736 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~---~~ak~~Ad~vl~~~~~~~i~ 736 (956)
...-.|+--..+.+.+.-..+.++++||..||+.+-+.||+....-..+. +.-...+|.++. ++..+.
T Consensus 146 --~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 146 --YSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred --CCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 11122322223333333234679999999999999999998754321221 112234777765 565554
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0019 Score=68.61 Aligned_cols=125 Identities=16% Similarity=0.138 Sum_probs=84.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.+...+..+-++.|+ ... -..++.+....
T Consensus 95 ~~~pg~~~~L~~L~-~~g~~l~i~Tn~~~~~~~~~l~~~~l--~~~--------f~~i~~~~~~~--------------- 148 (229)
T PRK13226 95 QLFDGVEGMLQRLE-CAGCVWGIVTNKPEYLARLILPQLGW--EQR--------CAVLIGGDTLA--------------- 148 (229)
T ss_pred eeCCCHHHHHHHHH-HCCCeEEEECCCCHHHHHHHHHHcCc--hhc--------ccEEEecCcCC---------------
Confidence 47899999999999 99999999999999888888899998 330 11222221110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE-e--CCC-C-hHHHHhcCCeeeccCChhHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS-I--GER-S-AQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-m--g~~-~-~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+--..+.+.+.-..+.++|+||+.||..+-+.||+... + |.. . .......+|+++. ++..+.+.+
T Consensus 149 -~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~ 224 (229)
T PRK13226 149 -ERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPA 224 (229)
T ss_pred -CCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHh
Confidence 11123333345555565556789999999999999999998743 3 211 1 1122345888886 666665544
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0036 Score=65.55 Aligned_cols=105 Identities=12% Similarity=0.039 Sum_probs=74.6
Q ss_pred cCcHHHHHHH-HHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAI-EDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I-~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.++|++.+.| +.++ +.|++++++|+-...-+..+++.+|+ ... ...+ |.+++.. ..-
T Consensus 95 ~~~pga~e~L~~~l~-~~G~~l~IvSas~~~~~~~il~~l~~--~~~--------~~~i--~t~l~~~---------~tg 152 (211)
T PRK11590 95 TAFPVVQERLTTYLL-SSDADVWLITGSPQPLVEQVYFDTPW--LPR--------VNLI--ASQMQRR---------YGG 152 (211)
T ss_pred cCCccHHHHHHHHHH-hCCCEEEEEeCCcHHHHHHHHHHccc--ccc--------CceE--EEEEEEE---------Ecc
Confidence 4589999999 5688 89999999999999999999999995 211 1111 2222110 000
Q ss_pred eEE-EecChhhHHHHHHHH-HhcCCeEEEEcCCccCHHHhhhCCccEEeC
Q 043517 665 RVM-ANASPLDKLLMVQCL-KQKGEVVAVTGMSTRDAPSLKEADVGVSIG 712 (956)
Q Consensus 665 ~v~-ar~~p~~K~~iv~~l-q~~g~~v~~iGDG~ND~~al~~AdvGIamg 712 (956)
++. ..|..++|.+-++.. ........+-||+.||.|||+.|+.+++++
T Consensus 153 ~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 153 WVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred EECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 011 236778898777654 333456678899999999999999999996
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0039 Score=67.87 Aligned_cols=122 Identities=13% Similarity=0.137 Sum_probs=82.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ .+. -..+++++..
T Consensus 142 ~l~pg~~e~L~~L~-~~gi~laIvSn~~~~~~~~~L~~~gl--~~~--------F~~vi~~~~~---------------- 194 (273)
T PRK13225 142 QLFPGVADLLAQLR-SRSLCLGILSSNSRQNIEAFLQRQGL--RSL--------FSVVQAGTPI---------------- 194 (273)
T ss_pred CcCCCHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHcCC--hhh--------eEEEEecCCC----------------
Confidence 46799999999999 99999999999999999999999999 430 1122222110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE-e--CCCChH-HHHhcCCeeeccCChhHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS-I--GERSAQ-FARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-m--g~~~~~-~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...|+--..+++.+.-..+.++++||+.+|+.+-+.|++-.. + |.+..+ .....+|+++. ++..+.+.+
T Consensus 195 ---~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 195 ---LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred ---CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 001222222333333335679999999999999999998743 2 211221 23446899886 777776654
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0033 Score=67.92 Aligned_cols=122 Identities=11% Similarity=0.096 Sum_probs=81.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+-+.+|+ .+. -..++++.+..
T Consensus 109 ~l~pg~~e~L~~L~-~~g~~l~I~Tn~~~~~~~~~l~~~gl-~~~---------Fd~ii~~~d~~--------------- 162 (260)
T PLN03243 109 RLRPGSREFVQALK-KHEIPIAVASTRPRRYLERAIEAVGM-EGF---------FSVVLAAEDVY--------------- 162 (260)
T ss_pred ccCCCHHHHHHHHH-HCCCEEEEEeCcCHHHHHHHHHHcCC-Hhh---------CcEEEecccCC---------------
Confidence 46899999999999 99999999999999999999999999 322 22333332221
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE-EeCCCChHHHHhcCCeeeccCChhHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV-SIGERSAQFARDCSDIVILDENFTTIA 736 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI-amg~~~~~~ak~~Ad~vl~~~~~~~i~ 736 (956)
...-.|+-=....+.+.-..+.++|+||..+|+.+-+.|++-. ++...........+|+++. ++..+.
T Consensus 163 -~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~ 231 (260)
T PLN03243 163 -RGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLS 231 (260)
T ss_pred -CCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHH
Confidence 1112233334444445444577999999999999999999853 3321222222335788766 555444
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0038 Score=67.12 Aligned_cols=117 Identities=18% Similarity=0.066 Sum_probs=80.2
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+-....+....+.+|+ ..- -..++.+.+..
T Consensus 108 ~l~pgv~e~L~~L~-~~g~~l~I~Tn~~~~~~~~~l~~~gl--~~~--------Fd~iv~~~~~~--------------- 161 (248)
T PLN02770 108 KPLNGLYKLKKWIE-DRGLKRAAVTNAPRENAELMISLLGL--SDF--------FQAVIIGSECE--------------- 161 (248)
T ss_pred CcCccHHHHHHHHH-HcCCeEEEEeCCCHHHHHHHHHHcCC--hhh--------CcEEEecCcCC---------------
Confidence 46789999999999 99999999999999999999999999 320 22333333221
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE-e--CCCChHHHHhcCCeeecc
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS-I--GERSAQFARDCSDIVILD 729 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-m--g~~~~~~ak~~Ad~vl~~ 729 (956)
...-.|+--....+.++-..+.++++||..+|..+-+.|++-.. + |....+.....+|+++.+
T Consensus 162 -~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 162 -HAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred -CCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 11223333344555555456789999999999999999998633 3 211112223468888873
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0043 Score=64.79 Aligned_cols=106 Identities=13% Similarity=0.067 Sum_probs=74.4
Q ss_pred cCcHHHHHHHH-HHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIE-DCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~-~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.++|++.+.|+ .++ +.|++++++|+-....+..+|+..|+ ... ...+ |.+++.... ..+
T Consensus 94 ~l~pga~e~L~~~l~-~~G~~v~IvSas~~~~~~~ia~~~~~-~~~---------~~~i--~t~le~~~g-------g~~ 153 (210)
T TIGR01545 94 TAFPLVAERLRQYLE-SSDADIWLITGSPQPLVEAVYFDSNF-IHR---------LNLI--ASQIERGNG-------GWV 153 (210)
T ss_pred CCCccHHHHHHHHHH-hCCCEEEEEcCCcHHHHHHHHHhccc-ccc---------CcEE--EEEeEEeCC-------ceE
Confidence 46899999996 788 89999999999999999999998665 221 1111 222221000 000
Q ss_pred eEEEecChhhHHHHHHHH-HhcCCeEEEEcCCccCHHHhhhCCccEEeC
Q 043517 665 RVMANASPLDKLLMVQCL-KQKGEVVAVTGMSTRDAPSLKEADVGVSIG 712 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~l-q~~g~~v~~iGDG~ND~~al~~AdvGIamg 712 (956)
.-..|..++|.+-++.. ....+...+-||+.||.|||+.||..++++
T Consensus 154 -~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 154 -LPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred -cCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 11346778898766654 323345678999999999999999999985
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0026 Score=67.01 Aligned_cols=123 Identities=21% Similarity=0.184 Sum_probs=80.7
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCccc--CCCCCCCCCCcceeeechhhhcCCHHHHHhhhc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILK--PGAEDHSNGYDAAVIEASVFRSSSEETRSLMVD 662 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 662 (956)
.++.||+.+.+++|+ +.|+++.++|+-....+..+.+++|+ . .- -..++.+.+..
T Consensus 86 ~~l~~G~~~~L~~L~-~~g~~~~ivT~~~~~~~~~~l~~~~l--~~~~~--------f~~i~~~~~~~------------ 142 (220)
T TIGR03351 86 PVALPGAEEAFRSLR-SSGIKVALTTGFDRDTAERLLEKLGW--TVGDD--------VDAVVCPSDVA------------ 142 (220)
T ss_pred CccCCCHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHHhhh--hhhcc--------CCEEEcCCcCC------------
Confidence 368899999999999 99999999999999999999999998 3 20 12222222110
Q ss_pred cceEEEecChhhHHHHHHHHHhc-CCeEEEEcCCccCHHHhhhCCccEE--eCCCCh---H-HHHhcCCeeeccCChhHH
Q 043517 663 NVRVMANASPLDKLLMVQCLKQK-GEVVAVTGMSTRDAPSLKEADVGVS--IGERSA---Q-FARDCSDIVILDENFTTI 735 (956)
Q Consensus 663 ~~~v~ar~~p~~K~~iv~~lq~~-g~~v~~iGDG~ND~~al~~AdvGIa--mg~~~~---~-~ak~~Ad~vl~~~~~~~i 735 (956)
..+-.|+--....+.+.-. .+.++++||+.+|..+-+.|++..+ +. .+. + .....+|+++. ++..+
T Consensus 143 ----~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~--~~~~l 215 (220)
T TIGR03351 143 ----AGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLD--SVADL 215 (220)
T ss_pred ----CCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeec--CHHHH
Confidence 0111223223333333333 3679999999999999999999862 32 221 1 22334777765 55555
Q ss_pred HH
Q 043517 736 AA 737 (956)
Q Consensus 736 ~~ 737 (956)
..
T Consensus 216 ~~ 217 (220)
T TIGR03351 216 PA 217 (220)
T ss_pred HH
Confidence 44
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0063 Score=60.39 Aligned_cols=104 Identities=17% Similarity=0.162 Sum_probs=68.8
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHH---HHHHh-----cCCcccCCCCCCCCCCcceeeechhhhcCCHH
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIAR---LIAIN-----SGLILKPGAEDHSNGYDAAVIEASVFRSSSEE 655 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~---~ia~~-----~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 655 (956)
+|.+.+++++++++++ +.|++++++|||+...+. ...++ .++ +.. ....-+|..+.....
T Consensus 25 ~~~~~~~~~~a~~~l~-~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~l--p~g--------~li~~~g~~~~~~~~- 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQ-NNGYKILYLTARPIGQADRTRSYLSQIKQDGHNL--PHG--------PVLLSPDRLFAALHR- 92 (157)
T ss_pred cCcCCHHHHHHHHHHH-HcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccC--CCc--------eEEEcCCcchhhhhc-
Confidence 4678899999999999 999999999999988874 45555 234 210 122223332211110
Q ss_pred HHHhhhccceEEEecChhhHHHHHHHHHh-----cCCeEEEEcCCccCHHHhhhCCcc
Q 043517 656 TRSLMVDNVRVMANASPLDKLLMVQCLKQ-----KGEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 656 ~~~~~~~~~~v~ar~~p~~K~~iv~~lq~-----~g~~v~~iGDG~ND~~al~~AdvG 708 (956)
.+..+..-+.|.+.++.+.+ ....++.+||+.+|+.+.+++++-
T Consensus 93 ---------e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 ---------EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ---------ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 12222222348778777776 346778899999999999887664
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.012 Score=66.39 Aligned_cols=67 Identities=16% Similarity=0.211 Sum_probs=48.5
Q ss_pred ecChh---hHHHHHHHHHhc-C-----C-eEEEEcCCccCHHHhhh-----CCccEEeCCCChHHHHhcCCeeeccCChh
Q 043517 669 NASPL---DKLLMVQCLKQK-G-----E-VVAVTGMSTRDAPSLKE-----ADVGVSIGERSAQFARDCSDIVILDENFT 733 (956)
Q Consensus 669 r~~p~---~K~~iv~~lq~~-g-----~-~v~~iGDG~ND~~al~~-----AdvGIamg~~~~~~ak~~Ad~vl~~~~~~ 733 (956)
+..|. +|...++.+.+. | . .++++||+.||..||+. +++||+|| ++... ..|++.+. +-.
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~--dp~ 367 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLR--DPS 367 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcC--CHH
Confidence 44553 888888877654 2 1 25899999999999996 69999999 66542 35788887 556
Q ss_pred HHHHHHH
Q 043517 734 TIAANLK 740 (956)
Q Consensus 734 ~i~~~i~ 740 (956)
.+.+.++
T Consensus 368 eV~~~L~ 374 (384)
T PLN02580 368 EVMEFLK 374 (384)
T ss_pred HHHHHHH
Confidence 6666554
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0052 Score=64.66 Aligned_cols=114 Identities=16% Similarity=0.129 Sum_probs=75.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+...-+..|+ .. ...++++....
T Consensus 83 ~~~pg~~e~L~~L~-~~g~~~~ivTn~~~~~~~~~l~~~~l--~~---------~~~i~~~~~~~--------------- 135 (218)
T PRK11587 83 TALPGAIALLNHLN-KLGIPWAIVTSGSVPVASARHKAAGL--PA---------PEVFVTAERVK--------------- 135 (218)
T ss_pred eeCcCHHHHHHHHH-HcCCcEEEEcCCCchHHHHHHHhcCC--CC---------ccEEEEHHHhc---------------
Confidence 46799999999999 99999999999887777666677777 32 12233332110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCCCCh-HHHHhcCCeeec
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGERSA-QFARDCSDIVIL 728 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~~-~~ak~~Ad~vl~ 728 (956)
...-.|+--....+.+.-..+.++++||..+|+.+-+.|++- |++. .+. ......+|+++.
T Consensus 136 -~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 136 -RGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred -CCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 011123333344444444457899999999999999999985 5554 332 222345777665
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0037 Score=67.22 Aligned_cols=135 Identities=14% Similarity=0.150 Sum_probs=81.4
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCC---CCcceeeechhhhcCCHHHHHhhh
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSN---GYDAAVIEASVFRSSSEETRSLMV 661 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~---~~~~~~i~g~~~~~~~~~~~~~~~ 661 (956)
-++||++.+.++.|+ +.|+++.++||-....+..+.+++|+ ...+...... -...-+.+|.. ..
T Consensus 120 l~l~pG~~efl~~L~-~~GIpv~IvS~G~~~~Ie~vL~~lgl-~~~~~~IvSN~L~f~~dGvltG~~-~P---------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQ-QHSIPVFIFSAGIGNVLEEVLRQAGV-YHPNVKVVSNFMDFDEDGVLKGFK-GP---------- 186 (277)
T ss_pred CccCcCHHHHHHHHH-HCCCcEEEEeCCcHHHHHHHHHHcCC-CCcCceEEeeeEEECCCCeEeCCC-CC----------
Confidence 357999999999999 99999999999999999999999999 3332110000 00011222210 00
Q ss_pred ccceEEEecChhhHHHHHH-----HHH--hcCCeEEEEcCCccCHHHhhhC-C--ccEEeCC-CC-h----HHHHhcCCe
Q 043517 662 DNVRVMANASPLDKLLMVQ-----CLK--QKGEVVAVTGMSTRDAPSLKEA-D--VGVSIGE-RS-A----QFARDCSDI 725 (956)
Q Consensus 662 ~~~~v~ar~~p~~K~~iv~-----~lq--~~g~~v~~iGDG~ND~~al~~A-d--vGIamg~-~~-~----~~ak~~Ad~ 725 (956)
-+. ...|.+.+. .++ .....|+++|||.||++|..-. . --+.+|- |. . +.=+++-|+
T Consensus 187 ---~i~----~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Di 259 (277)
T TIGR01544 187 ---LIH----TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDI 259 (277)
T ss_pred ---ccc----ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCE
Confidence 011 134544332 222 2346899999999999995433 1 1122220 22 1 123568899
Q ss_pred eeccCChhHHHHHH
Q 043517 726 VILDENFTTIAANL 739 (956)
Q Consensus 726 vl~~~~~~~i~~~i 739 (956)
|+.+|.--.++..|
T Consensus 260 vl~~D~t~~v~~~i 273 (277)
T TIGR01544 260 VLVQDETLEVANSI 273 (277)
T ss_pred EEECCCCchHHHHH
Confidence 99887655666554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.006 Score=66.38 Aligned_cols=94 Identities=11% Similarity=0.027 Sum_probs=64.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ +.|+++.++||.....+..+-+..|+ ..-. ...++++.+.
T Consensus 101 ~~~pg~~elL~~L~-~~g~~l~I~T~~~~~~~~~~l~~~~l--~~~~-------~d~i~~~~~~---------------- 154 (267)
T PRK13478 101 TPIPGVLEVIAALR-ARGIKIGSTTGYTREMMDVVVPLAAA--QGYR-------PDHVVTTDDV---------------- 154 (267)
T ss_pred CCCCCHHHHHHHHH-HCCCEEEEEcCCcHHHHHHHHHHHhh--cCCC-------ceEEEcCCcC----------------
Confidence 46789999999999 99999999999999988888888877 3200 0122222111
Q ss_pred EEEecChhhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCcc
Q 043517 666 VMANASPLDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvG 708 (956)
....|. ..-+.+.+++. .+.++||||+.+|..+-+.|++-
T Consensus 155 --~~~KP~-p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 155 --PAGRPY-PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred --CCCCCC-hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 111231 22333444433 35799999999999999999973
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0052 Score=66.24 Aligned_cols=97 Identities=15% Similarity=0.060 Sum_probs=66.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+-+++|+ ..-- ...++++.+..
T Consensus 99 ~~~pg~~e~L~~L~-~~g~~l~IvT~~~~~~~~~~l~~~gl--~~~f-------~d~ii~~~~~~--------------- 153 (253)
T TIGR01422 99 SPIPGVIEVIAYLR-ARGIKIGSTTGYTREMMDVVAPEAAL--QGYR-------PDYNVTTDDVP--------------- 153 (253)
T ss_pred ccCCCHHHHHHHHH-HCCCeEEEECCCcHHHHHHHHHHHHh--cCCC-------CceEEccccCC---------------
Confidence 36789999999999 99999999999999999999999998 3310 02222222110
Q ss_pred EEEecChhhHHHHHHHHHhc-CCeEEEEcCCccCHHHhhhCCcc
Q 043517 666 VMANASPLDKLLMVQCLKQK-GEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~-g~~v~~iGDG~ND~~al~~AdvG 708 (956)
...-.|+--....+.+.-. .+.++|+||..+|+.+-+.|++-
T Consensus 154 -~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 154 -AGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred -CCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 0111233223333444322 45699999999999999999976
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.01 Score=63.64 Aligned_cols=64 Identities=16% Similarity=0.104 Sum_probs=46.6
Q ss_pred ChhhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhC--------CccEEeCCCChHHHHhcCCeeeccCChhHHHHH
Q 043517 671 SPLDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEA--------DVGVSIGERSAQFARDCSDIVILDENFTTIAAN 738 (956)
Q Consensus 671 ~p~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~A--------dvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~ 738 (956)
.+.+|...++.+.++ ...++++||+.||.+|++.+ ..||+|+ .+ ..+..|++++. +...+.+.
T Consensus 164 ~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v~~~ 238 (244)
T TIGR00685 164 RFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQVLEF 238 (244)
T ss_pred CCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHHHHH
Confidence 345677777666544 35799999999999999999 5888885 33 23567899888 56666655
Q ss_pred H
Q 043517 739 L 739 (956)
Q Consensus 739 i 739 (956)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 5
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0058 Score=64.63 Aligned_cols=90 Identities=17% Similarity=0.160 Sum_probs=63.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCC----HHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDD----INIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMV 661 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~----~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 661 (956)
.|.+++++.++.++ +.|+++.++|||. ..++..+.+..|+ +... ....++.|+.
T Consensus 114 ~p~~Ga~elL~~L~-~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi--p~~~------~f~vil~gd~------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHV-KRGDSIYFITGRTATKTETVSKTLADDFHI--PADN------MNPVIFAGDK------------- 171 (237)
T ss_pred cchHHHHHHHHHHH-HCCCeEEEEeCCCCcccHHHHHHHHHHcCC--Cccc------ceeEEEcCCC-------------
Confidence 37788999999999 9999999999975 5688999999999 3210 0122222210
Q ss_pred ccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 662 DNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 662 ~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
....+|.. .+++.+ .++++||..+|..+-+.||+-.
T Consensus 172 --------~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 172 --------PGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred --------CCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 01134444 344444 4889999999999999999863
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.006 Score=64.62 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=62.5
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCC----CHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhc
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILED----DINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVD 662 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd----~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 662 (956)
+.+++.+.++.++ +.|+++.++|++ ...++..+.+.+|+ +.- ...++.|+...
T Consensus 115 p~~~a~elL~~l~-~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi--~~~--------f~~i~~~d~~~------------ 171 (237)
T TIGR01672 115 PKEVARQLIDMHQ-RRGDAIFFVTGRTPGKTDTVSKTLAKNFHI--PAM--------NPVIFAGDKPG------------ 171 (237)
T ss_pred chhHHHHHHHHHH-HCCCEEEEEeCCCCCcCHHHHHHHHHHhCC--chh--------eeEEECCCCCC------------
Confidence 4556999999999 999999999999 77799999999999 430 12222222110
Q ss_pred cceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc
Q 043517 663 NVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 663 ~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG 708 (956)
.-.| +|. ..+++.+ .++|+||..||..+-+.|++-
T Consensus 172 ------~~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 172 ------QYQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred ------CCCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 0112 233 2445554 479999999999999999875
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0076 Score=60.92 Aligned_cols=98 Identities=11% Similarity=-0.072 Sum_probs=59.9
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHH--------HHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHH
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDIN--------IARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRS 658 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~--------ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 658 (956)
+.|++.+++++|+ +.|+++.++|+.... ......+..|+ +. .........+.
T Consensus 29 ~~pgv~e~L~~Lk-~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~--~~-----------~~~~~~~~~~~------ 88 (173)
T PRK06769 29 LFPFTKASLQKLK-ANHIKIFSFTNQPGIADGIATIADFVQELKGFGF--DD-----------IYLCPHKHGDG------ 88 (173)
T ss_pred ECCCHHHHHHHHH-HCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCc--CE-----------EEECcCCCCCC------
Confidence 6799999999999 999999999987641 23333455666 32 00000000000
Q ss_pred hhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 659 LMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 659 ~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
. -...-.|+-=..+.+.+....+.++|+||..+|+.+-+.|++-..
T Consensus 89 -----~-~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 89 -----C-ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred -----C-CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 0 001112222244444444445789999999999999999998754
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0068 Score=62.65 Aligned_cols=93 Identities=14% Similarity=0.045 Sum_probs=65.9
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
+++.+++.++++.|+ +.|+++.++||.....+..+.+.+|+ ..- -..++++.+
T Consensus 105 ~~~~~~~~~~L~~l~-~~g~~~~i~T~~~~~~~~~~l~~~gl--~~~--------f~~~~~~~~---------------- 157 (197)
T TIGR01548 105 DETLLTPKGLLRELH-RAPKGMAVVTGRPRKDAAKFLTTHGL--EIL--------FPVQIWMED---------------- 157 (197)
T ss_pred cccccCHHHHHHHHH-HcCCcEEEECCCCHHHHHHHHHHcCc--hhh--------CCEEEeecC----------------
Confidence 445667799999999 99999999999999999999999999 430 112222111
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhC
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEA 705 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~A 705 (956)
+..+-.|+--....+.+.-..+.++++||+.+|+.+-+.|
T Consensus 158 -~~~KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 158 -CPPKPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred -CCCCcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 1112334444555555555567899999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0099 Score=60.05 Aligned_cols=148 Identities=16% Similarity=0.160 Sum_probs=86.9
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCC-CCCCCCCcceee-echh---------hhcCCHH
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGA-EDHSNGYDAAVI-EASV---------FRSSSEE 655 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~-~~~~~~~~~~~i-~g~~---------~~~~~~~ 655 (956)
+-|++.++++.++ +. ...+++|---..-+.++|+.+|+ +... .....+-++..+ ++.. ...++.+
T Consensus 84 lvPgA~etm~~l~-~~-~tp~v~STSY~qy~~r~a~~ig~--Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~ge 159 (315)
T COG4030 84 LVPGAEETMATLQ-ER-WTPVVISTSYTQYLRRTASMIGV--PRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGE 159 (315)
T ss_pred cCCChHHHHHHHh-cc-CCceEEeccHHHHHHHHHHhcCC--CccccccccccCccccCChHHHHHHHHhcCccccccHH
Confidence 5589999999998 65 34556666667778899999999 3311 000000000000 0000 0011112
Q ss_pred HHHhhhccceEEEecChhhHHHHHHH---------------HHhc---CCeEEEEcCCccCHHHhhhCC-cc-EEeCCCC
Q 043517 656 TRSLMVDNVRVMANASPLDKLLMVQC---------------LKQK---GEVVAVTGMSTRDAPSLKEAD-VG-VSIGERS 715 (956)
Q Consensus 656 ~~~~~~~~~~v~ar~~p~~K~~iv~~---------------lq~~---g~~v~~iGDG~ND~~al~~Ad-vG-Iamg~~~ 715 (956)
++.+.++. +|.|..|.+-.++++. +-+. ....+++||++.|..||+.+. -| +|+.-||
T Consensus 160 elfe~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNG 237 (315)
T COG4030 160 ELFEKLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNG 237 (315)
T ss_pred HHHHHHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecC
Confidence 11111111 5666666544444433 3332 345799999999999998773 22 5555588
Q ss_pred hHHHHhcCCeeeccCChhHHHHHHH
Q 043517 716 AQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 716 ~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
.+-|...||+.+.+.+..+...+|+
T Consensus 238 NeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 238 NEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred CcccccccceEEeccchhhhhHHHH
Confidence 8989999999998888777766654
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.011 Score=62.26 Aligned_cols=98 Identities=17% Similarity=0.111 Sum_probs=68.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ +.|+++.++|+-+...+....+++|+ ..- -..++.+.+
T Consensus 94 ~~~~g~~~~L~~L~-~~g~~~~i~Tn~~~~~~~~~l~~~~l--~~~--------f~~i~~~~~----------------- 145 (221)
T TIGR02253 94 RVYPGVRDTLMELR-ESGYRLGIITDGLPVKQWEKLERLGV--RDF--------FDAVITSEE----------------- 145 (221)
T ss_pred CCCCCHHHHHHHHH-HCCCEEEEEeCCchHHHHHHHHhCCh--HHh--------ccEEEEecc-----------------
Confidence 47899999999999 99999999999998888888999998 430 112222211
Q ss_pred EEEecChh--hHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCcc-EEeC
Q 043517 666 VMANASPL--DKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEADVG-VSIG 712 (956)
Q Consensus 666 v~ar~~p~--~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~AdvG-Iamg 712 (956)
..+..|. --..+.+.+.-..+.++++||.. +|+.+-+.||+- |.+.
T Consensus 146 -~~~~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 146 -EGVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 1122332 22333333333346899999998 999999999985 4444
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.021 Score=64.42 Aligned_cols=121 Identities=12% Similarity=0.090 Sum_probs=81.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.||+.+.++.|+ +.|+++.++|+.....+..+-+..|| ..- -..++.+.+..
T Consensus 216 ~l~pGa~ElL~~Lk-~~GiklaIaSn~~~~~~~~~L~~lgL--~~y--------Fd~Iv~sddv~--------------- 269 (381)
T PLN02575 216 RLRTGSQEFVNVLM-NYKIPMALVSTRPRKTLENAIGSIGI--RGF--------FSVIVAAEDVY--------------- 269 (381)
T ss_pred CcCcCHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHcCC--HHH--------ceEEEecCcCC---------------
Confidence 36799999999999 99999999999999999999999999 330 12222222110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE-eCCCChHHH-HhcCCeeeccCChhHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS-IGERSAQFA-RDCSDIVILDENFTTIA 736 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-mg~~~~~~a-k~~Ad~vl~~~~~~~i~ 736 (956)
...-.|+-=....+.+.-..+.++|+||..+|+.|-+.|++-.. +. .+.+.. ...||+++. ++..+.
T Consensus 270 -~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~--s~~EL~ 338 (381)
T PLN02575 270 -RGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVR--RLDELS 338 (381)
T ss_pred -CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEEC--CHHHHH
Confidence 01112333344555555556889999999999999999998633 33 322221 234787766 555543
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.031 Score=56.93 Aligned_cols=125 Identities=15% Similarity=0.081 Sum_probs=71.3
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCH---------------HHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhc
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDI---------------NIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRS 651 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~---------------~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~ 651 (956)
+.|++.+++++|+ +.|+++.++|..+. .....+-++.|+ .- ...+.....-.
T Consensus 30 ~~pgv~e~L~~Lk-~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f---------~~i~~~~~~~~- 96 (181)
T PRK08942 30 PIPGSIEAIARLK-QAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RL---------DGIYYCPHHPE- 96 (181)
T ss_pred ECCCHHHHHHHHH-HCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--cc---------ceEEECCCCCC-
Confidence 5799999999999 99999999998762 111223344554 11 00000000000
Q ss_pred CCHHHHHhhhccceEEEecC--hhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE-EeCCCChH---HHHhcC--
Q 043517 652 SSEETRSLMVDNVRVMANAS--PLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV-SIGERSAQ---FARDCS-- 723 (956)
Q Consensus 652 ~~~~~~~~~~~~~~v~ar~~--p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI-amg~~~~~---~ak~~A-- 723 (956)
....... |+--....+.+.-..+.++|+||..+|+.+-+.|++.. .+. .+.. .....+
T Consensus 97 -------------~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~ 162 (181)
T PRK08942 97 -------------DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPG 162 (181)
T ss_pred -------------CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCC
Confidence 0011122 33334444444444578999999999999999999752 232 2221 122335
Q ss_pred CeeeccCChhHHHHHHH
Q 043517 724 DIVILDENFTTIAANLK 740 (956)
Q Consensus 724 d~vl~~~~~~~i~~~i~ 740 (956)
|+++. ++..+.+.+.
T Consensus 163 ~~ii~--~l~el~~~l~ 177 (181)
T PRK08942 163 TWVLD--SLADLPQALK 177 (181)
T ss_pred ceeec--CHHHHHHHHH
Confidence 77765 6666666543
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.013 Score=62.05 Aligned_cols=94 Identities=9% Similarity=-0.006 Sum_probs=66.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+-+...+...-+..|+ .+. -..++.+.+
T Consensus 93 ~~~~g~~e~L~~Lk-~~g~~~~i~Tn~~~~~~~~~l~~~~l-~~~---------fd~iv~s~~----------------- 144 (224)
T PRK14988 93 VLREDTVPFLEALK-ASGKRRILLTNAHPHNLAVKLEHTGL-DAH---------LDLLLSTHT----------------- 144 (224)
T ss_pred CcCCCHHHHHHHHH-hCCCeEEEEeCcCHHHHHHHHHHCCc-HHH---------CCEEEEeee-----------------
Confidence 57899999999999 99999999999988888888888998 321 112222111
Q ss_pred EEEecCh--hhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc
Q 043517 666 VMANASP--LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 666 v~ar~~p--~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG 708 (956)
+.+..| +-=....+.+.-..+.++++||..+|+.+-+.||+.
T Consensus 145 -~~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 145 -FGYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 111233 212233333333356799999999999999999996
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.012 Score=57.75 Aligned_cols=107 Identities=13% Similarity=-0.007 Sum_probs=71.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCC-CCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDH-SNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.++|+-++.++.++ +.+++++++|+....-...+-+..+= -+.-...+ ..++...-.+|. .
T Consensus 73 ~Idp~fKef~e~ik-e~di~fiVvSsGm~~fI~~lfe~ivg-ke~i~~idi~sn~~~ih~dg~----------------h 134 (220)
T COG4359 73 KIDPGFKEFVEWIK-EHDIPFIVVSSGMDPFIYPLFEGIVG-KERIYCIDIVSNNDYIHIDGQ----------------H 134 (220)
T ss_pred ccCccHHHHHHHHH-HcCCCEEEEeCCCchHHHHHHHhhcc-ccceeeeEEeecCceEcCCCc----------------e
Confidence 47899999999999 99999999999887777777776551 01000000 000000000110 0
Q ss_pred eEEE---ecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 665 RVMA---NASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 665 ~v~a---r~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
.+.. ..-.-+|...|+.+++..+.+.++|||+.|.+|-+.+|+=.|
T Consensus 135 ~i~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 135 SIKYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred eeecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 0111 111247899999999999999999999999999999998775
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.016 Score=68.28 Aligned_cols=124 Identities=14% Similarity=0.022 Sum_probs=83.3
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ..- -..++++.+..
T Consensus 330 ~l~pG~~e~L~~Lk-~~g~~l~IvS~~~~~~~~~~l~~~~l--~~~--------f~~i~~~d~v~--------------- 383 (459)
T PRK06698 330 ALYPNVKEIFTYIK-ENNCSIYIASNGLTEYLRAIVSYYDL--DQW--------VTETFSIEQIN--------------- 383 (459)
T ss_pred CcCCCHHHHHHHHH-HCCCeEEEEeCCchHHHHHHHHHCCc--Hhh--------cceeEecCCCC---------------
Confidence 57899999999999 99999999999999999999999998 320 12233332211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCC-CChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGE-RSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~-~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
..-.|+--....+.+ ..+.+.++||+.+|+.+-+.|++- |++.. ...+.....+|+++. ++..+.+.+..
T Consensus 384 --~~~kP~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~ 455 (459)
T PRK06698 384 --SLNKSDLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILST 455 (459)
T ss_pred --CCCCcHHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHHH
Confidence 112343222222222 246799999999999999999984 44431 122222345788876 77777666543
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.016 Score=59.87 Aligned_cols=95 Identities=14% Similarity=0.174 Sum_probs=67.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+++++|+ +.|+++.++|+-+...+....+.+|+ ... -..+++..+
T Consensus 92 ~~~~~~~~~L~~L~-~~g~~~~i~Sn~~~~~~~~~l~~~gl--~~~--------fd~i~~s~~----------------- 143 (198)
T TIGR01428 92 PPHPDVPAGLRALK-ERGYRLAILSNGSPAMLKSLVKHAGL--DDP--------FDAVLSADA----------------- 143 (198)
T ss_pred CCCCCHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHCCC--hhh--------hheeEehhh-----------------
Confidence 47799999999999 99999999999999999999999998 320 112222211
Q ss_pred EEEecChh--hHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 666 VMANASPL--DKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 666 v~ar~~p~--~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
.....|. -=..+.+.+.-..+.++++||+.+|+.+-+.||+-.
T Consensus 144 -~~~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 144 -VRAYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred -cCCCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 1122332 223344444444578999999999999999998864
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.055 Score=54.80 Aligned_cols=36 Identities=11% Similarity=0.158 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCC
Q 043517 590 EVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGL 626 (956)
Q Consensus 590 ~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi 626 (956)
.+.+.+.+|+ ++|++|+.+|.-.......+-+++|+
T Consensus 27 pA~pv~~el~-d~G~~Vi~~SSKT~aE~~~l~~~l~v 62 (274)
T COG3769 27 PAAPVLLELK-DAGVPVILCSSKTRAEMLYLQKSLGV 62 (274)
T ss_pred ccchHHHHHH-HcCCeEEEeccchHHHHHHHHHhcCC
Confidence 4678999999 99999999999999999999999998
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.075 Score=66.67 Aligned_cols=68 Identities=7% Similarity=0.031 Sum_probs=49.9
Q ss_pred HHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHH-HhhCCCEEEEEcCCCH
Q 043517 536 NNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDC-RESAGIKIKLILEDDI 614 (956)
Q Consensus 536 ~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l-~~~~Gi~v~m~TGd~~ 614 (956)
......|.. ...|.+++-| |.+++-.....-.+-+++.+++++| + +.|+.|+++|||..
T Consensus 585 ~~i~~~y~~--~~~rlI~LDy-----------------DGTLlp~~~~~~~p~~~~~~~L~~L~~-d~g~~VaIvSGR~~ 644 (854)
T PLN02205 585 EHIVSAYKR--TTTRAILLDY-----------------DGTLMPQASIDKSPSSKSIDILNTLCR-DKNNMVFIVSARSR 644 (854)
T ss_pred HHHHHHHHh--hcCeEEEEec-----------------CCcccCCccccCCCCHHHHHHHHHHHh-cCCCEEEEEeCCCH
Confidence 444555555 6667777766 6666644333346678999999998 6 88999999999999
Q ss_pred HHHHHHHHh
Q 043517 615 NIARLIAIN 623 (956)
Q Consensus 615 ~ta~~ia~~ 623 (956)
.+....-..
T Consensus 645 ~~L~~~f~~ 653 (854)
T PLN02205 645 KTLADWFSP 653 (854)
T ss_pred HHHHHHhCC
Confidence 998887644
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.027 Score=53.96 Aligned_cols=92 Identities=16% Similarity=0.125 Sum_probs=64.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCC--------HHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHH
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDD--------INIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETR 657 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~--------~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 657 (956)
++.|++.++++.|+ ++|+++.++|+.. ...+..+.+.+|+ .. ......+ .
T Consensus 25 ~~~~~v~~~l~~L~-~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l--~~---------~~~~~~~-~--------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELK-EAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV--PI---------DVLYACP-H--------- 82 (132)
T ss_pred eeCCCHHHHHHHHH-HCCCEEEEEECCccccccHHHHHHHHHHHHHCCC--CE---------EEEEECC-C---------
Confidence 57799999999999 9999999999998 7778888898998 32 1111111 0
Q ss_pred HhhhccceEEEecChhhHHHHHHHHH-hcCCeEEEEcC-CccCHHHhhhCCcc
Q 043517 658 SLMVDNVRVMANASPLDKLLMVQCLK-QKGEVVAVTGM-STRDAPSLKEADVG 708 (956)
Q Consensus 658 ~~~~~~~~v~ar~~p~~K~~iv~~lq-~~g~~v~~iGD-G~ND~~al~~AdvG 708 (956)
...-.|+-=..+.+.++ -..+.++|+|| ..+|+.+-+.|++-
T Consensus 83 ---------~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ---------CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ---------CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01112233344455552 44578999999 59999999988864
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.011 Score=60.11 Aligned_cols=94 Identities=16% Similarity=0.114 Sum_probs=61.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ ++|+++.++|+... +....+.+|+ ... -..++++.+..
T Consensus 87 ~~~pg~~~~L~~L~-~~g~~~~i~s~~~~--~~~~l~~~~l--~~~--------f~~~~~~~~~~--------------- 138 (185)
T TIGR01990 87 DVLPGIKNLLDDLK-KNNIKIALASASKN--APTVLEKLGL--IDY--------FDAIVDPAEIK--------------- 138 (185)
T ss_pred ccCccHHHHHHHHH-HCCCeEEEEeCCcc--HHHHHHhcCc--Hhh--------CcEEEehhhcC---------------
Confidence 57799999999999 99999999997543 4567888898 321 12223222110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG 708 (956)
..+-.|+-=....+.+.-..+.++|+||..+|+.+-+.|++-
T Consensus 139 -~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 139 -KGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -CCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 111222222333333333346799999999999999999885
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.019 Score=63.65 Aligned_cols=109 Identities=7% Similarity=-0.127 Sum_probs=74.9
Q ss_pred eecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhh
Q 043517 582 RLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMV 661 (956)
Q Consensus 582 ~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 661 (956)
...+++.+++.++++.|+ +.|++++++||++...+..+.+.+|+ ... .-..+.|.+. ... .+
T Consensus 183 ~~~~~~~~~~~~~l~~l~-~~g~~i~i~T~r~~~~~~~~l~~l~~--~~~--------~f~~i~~~~~----~~~---~~ 244 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYK-AAGYEIIVVSGRDGVCEEDTVEWLRQ--TDI--------WFDDLIGRPP----DMH---FQ 244 (300)
T ss_pred cccCCCChhHHHHHHHHH-hCCCEEEEEeCCChhhHHHHHHHHHH--cCC--------chhhhhCCcc----hhh---hc
Confidence 367899999999999999 99999999999999999999999998 320 0000111110 000 00
Q ss_pred ccceEEEecChhhHHHHHHHHHh-cCCeEEEEcCCccCHHHhhhCCccE
Q 043517 662 DNVRVMANASPLDKLLMVQCLKQ-KGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 662 ~~~~v~ar~~p~~K~~iv~~lq~-~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
... --.+-.|+-+...++.+.. ....++|+||..+|+.+-+.|++-.
T Consensus 245 ~~~-~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 245 REQ-GDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred ccC-CCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 000 0013345566666665543 3478999999999999999999874
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.025 Score=59.53 Aligned_cols=120 Identities=12% Similarity=0.017 Sum_probs=75.2
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.+++|+ +. +++.++|+-....+..+.+++|+ ..- -..++.+.+.
T Consensus 97 ~~~~g~~~~L~~l~-~~-~~~~i~Sn~~~~~~~~~l~~~~l--~~~--------fd~i~~~~~~---------------- 148 (224)
T TIGR02254 97 QLLPGAFELMENLQ-QK-FRLYIVTNGVRETQYKRLRKSGL--FPF--------FDDIFVSEDA---------------- 148 (224)
T ss_pred eeCccHHHHHHHHH-hc-CcEEEEeCCchHHHHHHHHHCCc--Hhh--------cCEEEEcCcc----------------
Confidence 57899999999999 88 99999999999999999999998 320 1112211110
Q ss_pred EEEecChh--hHHHHHHHH-HhcCCeEEEEcCCc-cCHHHhhhCCcc-EEeCC-CChHHHHhcCCeeeccCChhHHHH
Q 043517 666 VMANASPL--DKLLMVQCL-KQKGEVVAVTGMST-RDAPSLKEADVG-VSIGE-RSAQFARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 666 v~ar~~p~--~K~~iv~~l-q~~g~~v~~iGDG~-ND~~al~~AdvG-Iamg~-~~~~~ak~~Ad~vl~~~~~~~i~~ 737 (956)
....|+ -=...++.+ .-..+.++++||+. +|..+=+.+|+- |.... ...+.....+++++. ++..+..
T Consensus 149 --~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 149 --GIQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred --CCCCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 111232 223444444 33346799999998 899999999974 33321 111122234566654 5555443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.026 Score=57.13 Aligned_cols=93 Identities=20% Similarity=0.154 Sum_probs=63.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+-.... ..+..++|+ ... -..++.+.+.
T Consensus 85 ~~~~g~~~~l~~l~-~~g~~~~i~Tn~~~~~-~~~~~~~~l--~~~--------f~~i~~~~~~---------------- 136 (183)
T TIGR01509 85 KPLPGVEPLLEALR-ARGKKLALLTNSPRDH-AVLVQELGL--RDL--------FDVVIFSGDV---------------- 136 (183)
T ss_pred ccCcCHHHHHHHHH-HCCCeEEEEeCCchHH-HHHHHhcCC--HHH--------CCEEEEcCCC----------------
Confidence 57899999999999 9999999999988877 666666888 320 1122222110
Q ss_pred EEEecC--hhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc
Q 043517 666 VMANAS--PLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 666 v~ar~~--p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG 708 (956)
.... |+--..+.+.+.-....+.++||...|+.+-+.+|+-
T Consensus 137 --~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 137 --GRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 1122 2333444444444467899999999999999988873
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.019 Score=58.44 Aligned_cols=92 Identities=16% Similarity=0.133 Sum_probs=62.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ +.|+++.++|+. ..+..+.+.+|+ ..- -..++.+..
T Consensus 88 ~~~~g~~~~l~~l~-~~g~~i~i~S~~--~~~~~~l~~~~l--~~~--------f~~v~~~~~----------------- 137 (185)
T TIGR02009 88 EVLPGIENFLKRLK-KKGIAVGLGSSS--KNADRILAKLGL--TDY--------FDAIVDADE----------------- 137 (185)
T ss_pred CCCcCHHHHHHHHH-HcCCeEEEEeCc--hhHHHHHHHcCh--HHH--------CCEeeehhh-----------------
Confidence 58899999999999 999999999987 567778888998 320 111221111
Q ss_pred EEEecChhh--HHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc
Q 043517 666 VMANASPLD--KLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 666 v~ar~~p~~--K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG 708 (956)
..+..|.. =....+.+.-..+.++++||+.+|+.+-+.|++.
T Consensus 138 -~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 138 -VKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred -CCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11123321 1233333333346799999999999999999875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.014 Score=58.28 Aligned_cols=97 Identities=18% Similarity=0.154 Sum_probs=69.8
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.++.|++.+.++.|+ +.|++++++|+.+........+++|+ ..- -..++.+.+...
T Consensus 76 ~~~~~~~~~~L~~l~-~~~~~~~i~Sn~~~~~~~~~l~~~~~--~~~--------f~~i~~~~~~~~------------- 131 (176)
T PF13419_consen 76 LQPYPGVRELLERLK-AKGIPLVIVSNGSRERIERVLERLGL--DDY--------FDEIISSDDVGS------------- 131 (176)
T ss_dssp EEESTTHHHHHHHHH-HTTSEEEEEESSEHHHHHHHHHHTTH--GGG--------CSEEEEGGGSSS-------------
T ss_pred cchhhhhhhhhhhcc-cccceeEEeecCCccccccccccccc--ccc--------cccccccchhhh-------------
Confidence 357899999999999 99999999999999999999999998 320 112222211110
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG 708 (956)
..-.|+-=..+++.+.-..+.++++||+..|+.+-+.||+-
T Consensus 132 ---~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 132 ---RKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp ---STTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred ---hhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 01122333455555555568899999999999999999875
|
... |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.039 Score=60.61 Aligned_cols=118 Identities=14% Similarity=0.041 Sum_probs=73.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+-+......+-+..+. ..... ...++.+.+..
T Consensus 144 ~l~pGv~elL~~L~-~~g~~l~IvTn~~~~~~~~~l~~~~~-~~~~~-------~~~~v~~~~~~--------------- 199 (286)
T PLN02779 144 PLRPGVLRLMDEAL-AAGIKVAVCSTSNEKAVSKIVNTLLG-PERAQ-------GLDVFAGDDVP--------------- 199 (286)
T ss_pred CchhhHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHhcc-ccccC-------ceEEEeccccC---------------
Confidence 47899999999999 99999999999988888777666543 11100 00111221110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCCh--HHHHhcCCeeec
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSA--QFARDCSDIVIL 728 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~--~~ak~~Ad~vl~ 728 (956)
...-.|+-=..+.+.+.-..+.++||||+.+|+.+-+.||+....-..+. ......+|+++.
T Consensus 200 -~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 200 -KKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred -CCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 01112223344445554445789999999999999999998754322332 111235788775
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.036 Score=63.46 Aligned_cols=97 Identities=15% Similarity=0.072 Sum_probs=67.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHH-hcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAI-NSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~-~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
++.|++.+.++.|+ +.|+++.++|+.....+....+ ..|+ ..- -..++++++..
T Consensus 93 ~l~pGv~elL~~Lk-~~g~~l~IvTn~~~~~~~~~l~~~~gl--~~~--------Fd~ii~~d~v~-------------- 147 (382)
T PLN02940 93 KALPGANRLIKHLK-SHGVPMALASNSPRANIEAKISCHQGW--KES--------FSVIVGGDEVE-------------- 147 (382)
T ss_pred CCCcCHHHHHHHHH-HCCCcEEEEeCCcHHHHHHHHHhccCh--Hhh--------CCEEEehhhcC--------------
Confidence 46799999999999 9999999999999888877665 6787 320 22233322110
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
...-.|+-=....+.+.-..+.++++||+.+|+.+-+.||+..
T Consensus 148 --~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 148 --KGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred --CCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 1112233334444444444678999999999999999999873
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.054 Score=57.05 Aligned_cols=122 Identities=10% Similarity=0.055 Sum_probs=76.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ + |+++.++|......+...-+++|+ ..- -..++.+.+.
T Consensus 95 ~~~~g~~~~L~~L~-~-~~~~~i~Tn~~~~~~~~~l~~~~l--~~~--------fd~v~~~~~~---------------- 146 (224)
T PRK09449 95 TPLPGAVELLNALR-G-KVKMGIITNGFTELQQVRLERTGL--RDY--------FDLLVISEQV---------------- 146 (224)
T ss_pred ccCccHHHHHHHHH-h-CCeEEEEeCCcHHHHHHHHHhCCh--HHH--------cCEEEEECcc----------------
Confidence 46799999999999 7 699999999988888888888998 320 1112211111
Q ss_pred EEEecChh--hHHHHHHHHHhc-CCeEEEEcCCc-cCHHHhhhCCcc-EEeCCCChH-HHHhcCCeeeccCChhHHHHHH
Q 043517 666 VMANASPL--DKLLMVQCLKQK-GEVVAVTGMST-RDAPSLKEADVG-VSIGERSAQ-FARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 666 v~ar~~p~--~K~~iv~~lq~~-g~~v~~iGDG~-ND~~al~~AdvG-Iamg~~~~~-~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
....|. -=..+++.+.-. .+.++++||.. +|+.+-+.||+- |.+...+.. .....+|+++. ++..+.+++
T Consensus 147 --~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 147 --GVAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred --CCCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 112332 122333333321 25799999998 799999999986 333311211 11124677775 666666554
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.07 Score=53.76 Aligned_cols=113 Identities=9% Similarity=-0.032 Sum_probs=74.6
Q ss_pred CcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCC-CHHHHHHHHHhcCCcccCCC-CCCCCCCcceeeechhhhc
Q 043517 574 GLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILED-DINIARLIAINSGLILKPGA-EDHSNGYDAAVIEASVFRS 651 (956)
Q Consensus 574 ~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd-~~~ta~~ia~~~Gi~~~~~~-~~~~~~~~~~~i~g~~~~~ 651 (956)
+.......+-+-++.|++.+.++.|+ ++|+++.++|+- ....+..+.+.+|+ .... .....+.-..+
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk-~~G~~l~I~Sn~~~~~~~~~~L~~~~l--~~~~~~~~~~~~Fd~i-------- 101 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLK-DAGTYLATASWNDVPEWAYEILGTFEI--TYAGKTVPMHSLFDDR-------- 101 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHH-HCCCEEEEEeCCCChHHHHHHHHhCCc--CCCCCcccHHHhceee--------
Confidence 34455566666678999999999999 999999999976 88899999999998 4100 00000000111
Q ss_pred CCHHHHHhhhccceEEEecChhhH--HHHHHHHHhc------CCeEEEEcCCccCHHHhhhCCccEEe
Q 043517 652 SSEETRSLMVDNVRVMANASPLDK--LLMVQCLKQK------GEVVAVTGMSTRDAPSLKEADVGVSI 711 (956)
Q Consensus 652 ~~~~~~~~~~~~~~v~ar~~p~~K--~~iv~~lq~~------g~~v~~iGDG~ND~~al~~AdvGIam 711 (956)
+.++-.+..| .++.+.+.+. .+.++|+||...|+.+-++|++-.+.
T Consensus 102 --------------v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 102 --------------IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred --------------eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 1111111112 3445555433 36899999999999999999987654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.036 Score=55.83 Aligned_cols=85 Identities=16% Similarity=0.123 Sum_probs=62.3
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCC-HHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDD-INIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~-~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.+-+++.++++.|+ +.|+++.++|+.+ ...+..+.+.+|+ ..
T Consensus 43 ~~~pgv~e~L~~Lk-~~g~~l~I~Sn~~~~~~~~~~~~~~gl--~~---------------------------------- 85 (170)
T TIGR01668 43 EAYPALRDWIEELK-AAGRKLLIVSNNAGEQRAKAVEKALGI--PV---------------------------------- 85 (170)
T ss_pred CcChhHHHHHHHHH-HcCCEEEEEeCCchHHHHHHHHHHcCC--EE----------------------------------
Confidence 57799999999999 9999999999988 6777788888888 32
Q ss_pred eEEEecChh--hHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCcc
Q 043517 665 RVMANASPL--DKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEADVG 708 (956)
Q Consensus 665 ~v~ar~~p~--~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~AdvG 708 (956)
.+....|. -=..+.+.+.-..+.++|+||.. .|..+-+.|++-
T Consensus 86 -~~~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 86 -LPHAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred -EcCCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 11122332 22233333333356799999998 799999999985
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.046 Score=57.63 Aligned_cols=105 Identities=16% Similarity=0.203 Sum_probs=67.3
Q ss_pred cCcHHHHHHHHHH--HhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeec-hhhhcCCHHHHHhhhc
Q 043517 586 AYASEVKQAIEDC--RESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEA-SVFRSSSEETRSLMVD 662 (956)
Q Consensus 586 ~lr~~~~~~I~~l--~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~~~ 662 (956)
|+.|+.+++++.+ + +.|+.++++|.-|..-...+-+.-|+ ... -..+.+. ..++. .. .+.-...
T Consensus 71 p~~pgm~~~l~~l~~~-~~~~~~~IiSDaNs~fI~~iL~~~gl--~~~--------f~~I~TNpa~~~~-~G-~l~v~py 137 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKN-QRGFDLIIISDANSFFIETILEHHGL--RDC--------FSEIFTNPACFDA-DG-RLRVRPY 137 (234)
T ss_pred CCCccHHHHHHHHHhc-CCCceEEEEeCCcHhHHHHHHHhCCC--ccc--------cceEEeCCceecC-Cc-eEEEeCc
Confidence 4678999999999 5 68999999999999999999999999 431 1112221 11111 00 0000000
Q ss_pred cceEEEecChh-hHHHHHHHHHhc----C---CeEEEEcCCccC-HHHhh
Q 043517 663 NVRVMANASPL-DKLLMVQCLKQK----G---EVVAVTGMSTRD-APSLK 703 (956)
Q Consensus 663 ~~~v~ar~~p~-~K~~iv~~lq~~----g---~~v~~iGDG~ND-~~al~ 703 (956)
..+-+.+|.|. =|..+++.+++. | ..|.++|||.|| ||+++
T Consensus 138 h~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 138 HSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 00123344443 588888888765 4 699999999999 55554
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.087 Score=51.39 Aligned_cols=108 Identities=17% Similarity=0.224 Sum_probs=76.9
Q ss_pred HHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHH
Q 043517 540 RDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARL 619 (956)
Q Consensus 540 ~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ 619 (956)
+.+.. +|.|.+.+-. |-+++..= ....-|+.++-+++++ ++|+++.++|.-++..+..
T Consensus 21 ~~L~~--~Gikgvi~Dl-----------------DNTLv~wd--~~~~tpe~~~W~~e~k-~~gi~v~vvSNn~e~RV~~ 78 (175)
T COG2179 21 DILKA--HGIKGVILDL-----------------DNTLVPWD--NPDATPELRAWLAELK-EAGIKVVVVSNNKESRVAR 78 (175)
T ss_pred HHHHH--cCCcEEEEec-----------------cCceeccc--CCCCCHHHHHHHHHHH-hcCCEEEEEeCCCHHHHHh
Confidence 44555 8998887643 22333221 1235689999999999 9999999999999999999
Q ss_pred HHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhc---CCeEEEEcCCc
Q 043517 620 IAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQK---GEVVAVTGMST 696 (956)
Q Consensus 620 ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~---g~~v~~iGDG~ 696 (956)
.++++|+ +. ++--..|-.+ .+-+++++. .+.|+|+||..
T Consensus 79 ~~~~l~v--~f-----------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL 120 (175)
T COG2179 79 AAEKLGV--PF-----------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQL 120 (175)
T ss_pred hhhhcCC--ce-----------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchh
Confidence 9999999 54 4444555433 445555554 67999999974
Q ss_pred -cCHHHhhhCCc
Q 043517 697 -RDAPSLKEADV 707 (956)
Q Consensus 697 -ND~~al~~Adv 707 (956)
.|+-+=..|++
T Consensus 121 ~TDVlggnr~G~ 132 (175)
T COG2179 121 FTDVLGGNRAGM 132 (175)
T ss_pred hhhhhcccccCc
Confidence 57766555544
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.61 Score=52.37 Aligned_cols=47 Identities=9% Similarity=0.023 Sum_probs=38.2
Q ss_pred CcEEEEEeeecc--cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHH
Q 043517 574 GLTWLGLVRLKS--AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAI 622 (956)
Q Consensus 574 ~l~~lGli~~~d--~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~ 622 (956)
|.+++-++.-.| .+-+++.++|++|. + |++++++|||.......+..
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~-~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-K-CFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-c-CCcEEEEeCCCHHHHHHhhc
Confidence 778876665434 47799999999998 5 58999999999999988743
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.1 Score=52.86 Aligned_cols=27 Identities=15% Similarity=0.314 Sum_probs=24.1
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCH
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDI 614 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~ 614 (956)
+.|++.+++++|+ ++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk-~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELK-KMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHH-HCCCEEEEEeCCcc
Confidence 5689999999999 99999999997653
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.31 Score=52.19 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=33.9
Q ss_pred hhHHHHHHHHHhcCCeEEEEcC----CccCHHHhhh-CCccEEeC
Q 043517 673 LDKLLMVQCLKQKGEVVAVTGM----STRDAPSLKE-ADVGVSIG 712 (956)
Q Consensus 673 ~~K~~iv~~lq~~g~~v~~iGD----G~ND~~al~~-AdvGIamg 712 (956)
-+|..-++.|+ ..+.|+++|| |.||.+||+. -=.|+++.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 36888888888 7789999999 8999999996 66788885
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.14 Score=55.08 Aligned_cols=86 Identities=13% Similarity=0.066 Sum_probs=60.0
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHH---HHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhh
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINI---ARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMV 661 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~t---a~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 661 (956)
.++-|++.+.++.++ +.|+++.++|++.... +....++.|+ +... ..
T Consensus 117 a~~ipGA~e~L~~L~-~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi--~~~~-------~d-------------------- 166 (266)
T TIGR01533 117 AKPVAGALDFLNYAN-SKGVKIFYVSNRSEKEKAATLKNLKRFGF--PQAD-------EE-------------------- 166 (266)
T ss_pred CCcCccHHHHHHHHH-HCCCeEEEEeCCCcchHHHHHHHHHHcCc--CCCC-------cc--------------------
Confidence 446799999999999 9999999999988443 3455677888 3210 00
Q ss_pred ccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhh
Q 043517 662 DNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLK 703 (956)
Q Consensus 662 ~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~ 703 (956)
.++.|-....|..-.+.+.+.-.+++++||-.+|.....
T Consensus 167 ---~lllr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 167 ---HLLLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred ---eEEeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 134443333465556666666668999999999997644
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.17 Score=53.05 Aligned_cols=87 Identities=17% Similarity=0.058 Sum_probs=57.1
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHH---HHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhh
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINI---ARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMV 661 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~t---a~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 661 (956)
-|.-|++.++++.++ +.|++|+++|||.... +..--++.|+ +.- ..+++-+..
T Consensus 119 apaip~al~l~~~l~-~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~--~~~--------~~LiLR~~~------------- 174 (229)
T TIGR01675 119 APALPEGLKLYQKII-ELGIKIFLLSGRWEELRNATLDNLINAGF--TGW--------KHLILRGLE------------- 174 (229)
T ss_pred CCCCHHHHHHHHHHH-HCCCEEEEEcCCChHHHHHHHHHHHHcCC--CCc--------CeeeecCCC-------------
Confidence 367799999999999 9999999999999765 3334456787 320 111111100
Q ss_pred ccceEEEec-ChhhHHHHHHHHHhcCC-eEEEEcCCccCHH
Q 043517 662 DNVRVMANA-SPLDKLLMVQCLKQKGE-VVAVTGMSTRDAP 700 (956)
Q Consensus 662 ~~~~v~ar~-~p~~K~~iv~~lq~~g~-~v~~iGDG~ND~~ 700 (956)
-.+. .-+-|.+.-+.+.++|+ +++.+||..+|..
T Consensus 175 -----d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 175 -----DSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred -----CCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 0000 11127777777777765 7888999999974
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.098 Score=51.27 Aligned_cols=98 Identities=14% Similarity=0.110 Sum_probs=60.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCH---------------HHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDI---------------NIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFR 650 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~---------------~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~ 650 (956)
++.|++.++++.|+ +.|+++.++|..+. ..+..+.+.+|+ .. ...........
T Consensus 27 ~~~~g~~~~l~~Lk-~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~---------~~~~~~~~~~~ 94 (147)
T TIGR01656 27 QLRPGAVPALLTLR-AAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGV--AV---------DGVLFCPHHPA 94 (147)
T ss_pred EEcCChHHHHHHHH-HCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCC--ce---------eEEEECCCCCC
Confidence 36899999999999 99999999998762 445667778887 31 00000000000
Q ss_pred cCCHHHHHhhhccceEEEecChhh--HHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 651 SSSEETRSLMVDNVRVMANASPLD--KLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 651 ~~~~~~~~~~~~~~~v~ar~~p~~--K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
. -.....|+- =..+++.+.-..+.++++||...|+.+-+.|++-.
T Consensus 95 ~--------------~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 95 D--------------NCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred C--------------CCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 0 000013321 12333333333467999999999999999998754
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.097 Score=54.20 Aligned_cols=93 Identities=16% Similarity=0.048 Sum_probs=59.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++-|++.++++.|+ +.|+++.++|+-... .....+.+|+ ... -..++...+
T Consensus 105 ~~~~g~~~~l~~L~-~~g~~~~i~Sn~~~~-~~~~l~~~~l--~~~--------fd~i~~s~~----------------- 155 (203)
T TIGR02252 105 QVYPDAIKLLKDLR-ERGLILGVISNFDSR-LRGLLEALGL--LEY--------FDFVVTSYE----------------- 155 (203)
T ss_pred eeCcCHHHHHHHHH-HCCCEEEEEeCCchh-HHHHHHHCCc--HHh--------cceEEeecc-----------------
Confidence 46799999999999 999999999986654 4677788888 320 111111110
Q ss_pred EEEecChh--hHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCcc
Q 043517 666 VMANASPL--DKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEADVG 708 (956)
Q Consensus 666 v~ar~~p~--~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~AdvG 708 (956)
.....|+ -=..+.+.+.-..+.+++|||+. +|+.+-+.||+-
T Consensus 156 -~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 156 -VGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred -cCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 0111232 12233333333357899999997 899998888763
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.13 Score=50.52 Aligned_cols=90 Identities=18% Similarity=0.196 Sum_probs=58.0
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
..+++.+.++.|+ +.|+++.++|+.....+....+.. + ... ...++.... +
T Consensus 65 ~~~g~~e~l~~L~-~~g~~~~i~T~~~~~~~~~~~~~~-l-~~~---------f~~i~~~~~-----------------~ 115 (154)
T TIGR01549 65 YIRGAADLLKRLK-EAGIKLGIISNGSLRAQKLLLRKH-L-GDY---------FDLILGSDE-----------------F 115 (154)
T ss_pred eccCHHHHHHHHH-HCcCeEEEEeCCchHHHHHHHHHH-H-Hhc---------CcEEEecCC-----------------C
Confidence 4478999999999 999999999999999988888775 5 121 011111000 1
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCC
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEAD 706 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Ad 706 (956)
...-.|+--..+.+.+.-.. .++++||..+|+.+-+.|+
T Consensus 116 ~~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 116 GAKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CCCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 11112222233333333334 7999999999999888764
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.15 Score=53.67 Aligned_cols=99 Identities=14% Similarity=0.088 Sum_probs=61.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHH-HHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARL-IAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~-ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
++.|++.+.|+.|+ +.|+++.++||-....... ..+..|+ .+. -..++++.+.+
T Consensus 78 ~l~~gv~e~l~~L~-~~g~~~~i~S~~~~~~~~~~~~~~~~l-~~~---------f~~i~~~~~~~-------------- 132 (220)
T PLN02811 78 DLMPGAERLVRHLH-AKGIPIAIATGSHKRHFDLKTQRHGEL-FSL---------MHHVVTGDDPE-------------- 132 (220)
T ss_pred CCCccHHHHHHHHH-HCCCcEEEEeCCchhhHHHHHcccHHH-Hhh---------CCEEEECChhh--------------
Confidence 46799999999999 9999999999987654433 2222344 111 11222221000
Q ss_pred eEE-EecChhhHHHHHHHHH---hcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 665 RVM-ANASPLDKLLMVQCLK---QKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 665 ~v~-ar~~p~~K~~iv~~lq---~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
+- ..-.|+-=...++.+. -..+.+++|||...|+.+-+.||+-..
T Consensus 133 -~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 133 -VKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred -ccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 00 1112333344444443 234789999999999999999998743
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.1 Score=51.93 Aligned_cols=99 Identities=15% Similarity=0.077 Sum_probs=60.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCC---------------CHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILED---------------DINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFR 650 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd---------------~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~ 650 (956)
++-|++.+++++|+ +.|+++.++|.- ....+..+.+++|+ .- ...++. ....
T Consensus 29 ~~~pgv~e~L~~L~-~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl--~f---------d~ii~~-~~~~ 95 (161)
T TIGR01261 29 RFEKGVIPALLKLK-KAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGI--IF---------DDVLIC-PHFP 95 (161)
T ss_pred eECCCHHHHHHHHH-HCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCC--ce---------eEEEEC-CCCC
Confidence 35689999999999 999999999974 24456667788887 21 011111 0000
Q ss_pred cCCHHHHHhhhccceEEEecChhh--HHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 651 SSSEETRSLMVDNVRVMANASPLD--KLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 651 ~~~~~~~~~~~~~~~v~ar~~p~~--K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
. .-.....|.. -..+.+.+.-..+.+.|+||+.+|..+-+.|++-..
T Consensus 96 ~-------------~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 96 D-------------DNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred C-------------CCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0 0000113321 122222222223579999999999999999998754
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.23 Score=55.89 Aligned_cols=97 Identities=20% Similarity=0.174 Sum_probs=59.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCC---------------CHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILED---------------DINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFR 650 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd---------------~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~ 650 (956)
++.|++.+++++|+ ++|+++.++|+- ....+..+.+..|+ .- ....+......
T Consensus 30 ~l~pGV~e~L~~Lk-~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl--~f---------d~i~i~~~~~s 97 (354)
T PRK05446 30 AFEPGVIPALLKLQ-KAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGI--KF---------DEVLICPHFPE 97 (354)
T ss_pred eECcCHHHHHHHHH-hCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCC--ce---------eeEEEeCCcCc
Confidence 57899999999999 999999999983 23345556677776 21 01111100000
Q ss_pred cCCHHHHHhhhccceEEEecChhhHHHHHHHHHh----cCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 651 SSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQ----KGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 651 ~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~----~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
+ . ..+ ..| |.+++..+.+ ....+.|+||+.+|..+-+.|++-..
T Consensus 98 d-----------~--~~~-rKP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 98 D-----------N--CSC-RKP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred c-----------c--CCC-CCC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0 0 001 123 2333333222 24789999999999999999998743
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.27 Score=46.90 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=34.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCC-CHHHHHHHHHhcC
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILED-DINIARLIAINSG 625 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd-~~~ta~~ia~~~G 625 (956)
++.+++.+.++.|+ +.|+++.++|+. ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk-~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLK-KNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHH-HCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999 999999999999 7777777777776
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.67 E-value=0.38 Score=48.19 Aligned_cols=91 Identities=10% Similarity=0.027 Sum_probs=57.5
Q ss_pred cHHHHHHHHHHHhhCCCEEEEEcCCCHH------------HHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHH
Q 043517 588 ASEVKQAIEDCRESAGIKIKLILEDDIN------------IARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEE 655 (956)
Q Consensus 588 r~~~~~~I~~l~~~~Gi~v~m~TGd~~~------------ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 655 (956)
-|++.++++.|+ ++|+++.++|..+.. .+..+.+.+|+ .. ..++.+..
T Consensus 44 ~pgv~e~L~~Lk-~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl--~~----------~~ii~~~~------- 103 (166)
T TIGR01664 44 YPEIPAKLQELD-DEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV--PI----------QVLAATHA------- 103 (166)
T ss_pred cCCHHHHHHHHH-HCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC--CE----------EEEEecCC-------
Confidence 489999999999 999999999975542 45667788888 32 11111110
Q ss_pred HHHhhhccceEEEecChh--hHHHHHHHHH--hcCCeEEEEcCCc--------cCHHHhhhCCccE
Q 043517 656 TRSLMVDNVRVMANASPL--DKLLMVQCLK--QKGEVVAVTGMST--------RDAPSLKEADVGV 709 (956)
Q Consensus 656 ~~~~~~~~~~v~ar~~p~--~K~~iv~~lq--~~g~~v~~iGDG~--------ND~~al~~AdvGI 709 (956)
... ..|. --..+.+.+. -..+.+.||||.. +|..+-+.|++-.
T Consensus 104 ----------~~~-~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 ----------GLY-RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ----------CCC-CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 001 1232 2233333333 2236799999986 6999988887644
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.67 E-value=0.13 Score=50.45 Aligned_cols=94 Identities=10% Similarity=-0.095 Sum_probs=65.6
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhcc
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDN 663 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 663 (956)
.-++||++.+.++.|+ + ++++.++|.-+...+..+.+.+|+ ...- ...++++++.
T Consensus 43 ~v~l~pG~~e~L~~L~-~-~~~l~I~Ts~~~~~~~~il~~l~~--~~~~-------f~~i~~~~d~-------------- 97 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-E-LFELVVFTAGLRMYADPVLDLLDP--KKYF-------GYRRLFRDEC-------------- 97 (148)
T ss_pred EEEECCCHHHHHHHHH-h-ccEEEEEeCCcHHHHHHHHHHhCc--CCCE-------eeeEEECccc--------------
Confidence 3457999999999999 7 599999999999999999999988 3200 0122222211
Q ss_pred ceEEEecChhhHHHHHHHHH---hcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 664 VRVMANASPLDKLLMVQCLK---QKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 664 ~~v~ar~~p~~K~~iv~~lq---~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
.+..|. +.+.++ ...+.+.++||..+|..+-+.|++-|.
T Consensus 98 ----~~~KP~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 98 ----VFVKGK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ----cccCCe----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 111232 333343 345789999999999999887866654
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.33 Score=51.00 Aligned_cols=98 Identities=13% Similarity=0.137 Sum_probs=65.8
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhc---CCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhh
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINS---GLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLM 660 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~---Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 660 (956)
+-++.|++.+++++|+ ++|+++.++|..+......+-+.. ++ .+- ++ ..
T Consensus 93 ~~~lypgv~e~L~~Lk-~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L--~~~------------f~-------------~~ 144 (220)
T TIGR01691 93 TSHLYPDVPPALEAWL-QLGLRLAVYSSGSVPAQKLLFGHSDAGNL--TPY------------FS-------------GY 144 (220)
T ss_pred ccCcCcCHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHhhccccch--hhh------------cc-------------eE
Confidence 3468899999999999 999999999999887777766654 33 210 00 00
Q ss_pred hccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 661 VDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 661 ~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
+. ..+...-.|+-=..+.+.+.-..+.++++||...|+.+-++||+-..
T Consensus 145 fd-~~~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 145 FD-TTVGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred EE-eCcccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 00 00111123333345555554445789999999999999999999754
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.61 E-value=0.42 Score=61.95 Aligned_cols=128 Identities=14% Similarity=0.133 Sum_probs=83.0
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.|++.+.+++|+ ++|+++.++|+-....+..+.++.|+ .... -..++.+.+
T Consensus 162 ~~pG~~elL~~Lk-~~G~~l~IvSn~~~~~~~~~L~~~gl--~~~~-------Fd~iv~~~~------------------ 213 (1057)
T PLN02919 162 GFPGALELITQCK-NKGLKVAVASSADRIKVDANLAAAGL--PLSM-------FDAIVSADA------------------ 213 (1057)
T ss_pred cCccHHHHHHHHH-hCCCeEEEEeCCcHHHHHHHHHHcCC--ChhH-------CCEEEECcc------------------
Confidence 5689999999999 99999999999999999999999998 3100 112222221
Q ss_pred EEecCh--hhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCC--CChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 667 MANASP--LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGE--RSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 667 ~ar~~p--~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~--~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
+.+..| +-=.+..+.+.-..+.++++||..+|+.+-+.|++- |++.. ...+.....+|+++.+-..-++..++..
T Consensus 214 ~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~ 293 (1057)
T PLN02919 214 FENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTG 293 (1057)
T ss_pred cccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhc
Confidence 122233 323444455544467899999999999999999984 44431 1122334567887764333334444444
Q ss_pred h
Q 043517 742 G 742 (956)
Q Consensus 742 g 742 (956)
|
T Consensus 294 ~ 294 (1057)
T PLN02919 294 G 294 (1057)
T ss_pred C
Confidence 3
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=92.60 E-value=0.88 Score=48.60 Aligned_cols=47 Identities=13% Similarity=0.113 Sum_probs=37.5
Q ss_pred EEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHH--HHHHhcCC
Q 043517 579 GLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIAR--LIAINSGL 626 (956)
Q Consensus 579 Gli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~--~ia~~~Gi 626 (956)
|.+.-.+.+-|++.+++++|+ ++|+++.++|.-....+. ...+++|+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~-~~G~~~~ivTN~~~~~~~~~~~L~~~gl 65 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKII-AQGKPVYFVSNSPRNIFSLHKTLKSLGI 65 (242)
T ss_pred cccccCCccCccHHHHHHHHH-HCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence 444556778899999999999 999999999986554444 56688898
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.41 E-value=0.13 Score=52.32 Aligned_cols=114 Identities=12% Similarity=0.115 Sum_probs=70.4
Q ss_pred cCcHHHHHHHHHHHhhCCC-EEEEEcCCCHHHHHHHHHhcCCcccCCCC----C-CCCCCcceeeechhhhcCCHHHHHh
Q 043517 586 AYASEVKQAIEDCRESAGI-KIKLILEDDINIARLIAINSGLILKPGAE----D-HSNGYDAAVIEASVFRSSSEETRSL 659 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi-~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~----~-~~~~~~~~~i~g~~~~~~~~~~~~~ 659 (956)
|+-|+..++|+.++ +.|- .++++|--|..-...+-+..|+ .+--.+ . .....+.+.+..-.
T Consensus 84 P~~Pgmv~lik~~a-k~g~~eliIVSDaNsfFIe~~Lea~~~-~d~F~~IfTNPa~~da~G~L~v~pyH----------- 150 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAA-KLGCFELIIVSDANSFFIEEILEAAGI-HDLFSEIFTNPACVDASGRLLVRPYH----------- 150 (256)
T ss_pred CCCccHHHHHHHHH-hCCCceEEEEecCchhHHHHHHHHccH-HHHHHHHhcCCcccCCCCcEEeecCC-----------
Confidence 56689999999999 8887 8999999999988888888887 221000 0 00000111110000
Q ss_pred hhccceEEEecChh-hHHHHHHHHHhc-------CCeEEEEcCCccC-HHHhhhCCccEEeCCCC
Q 043517 660 MVDNVRVMANASPL-DKLLMVQCLKQK-------GEVVAVTGMSTRD-APSLKEADVGVSIGERS 715 (956)
Q Consensus 660 ~~~~~~v~ar~~p~-~K~~iv~~lq~~-------g~~v~~iGDG~ND-~~al~~AdvGIamg~~~ 715 (956)
..+=+.+|.+. =|..++..++.. -+.+..+|||.|| ||+++...--+||--.|
T Consensus 151 ---~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkg 212 (256)
T KOG3120|consen 151 ---TQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKG 212 (256)
T ss_pred ---CCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCC
Confidence 00012233222 266666666543 2489999999999 78888777777875434
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.56 Score=46.75 Aligned_cols=86 Identities=12% Similarity=0.053 Sum_probs=65.6
Q ss_pred cccCcHHHHHHHHHHHhhCCC--EEEEEcCC-------CHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCH
Q 043517 584 KSAYASEVKQAIEDCRESAGI--KIKLILED-------DINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSE 654 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi--~v~m~TGd-------~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 654 (956)
++.+-|+..+.+++|+ +.+. +++++|-- +...|..+++.+|+ +-
T Consensus 57 ~~~i~~~~~~~~~~l~-~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI--pv------------------------ 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELK-KQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI--PV------------------------ 109 (168)
T ss_pred cCcCCHHHHHHHHHHH-HHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC--cE------------------------
Confidence 5668899999999999 7766 59999986 48899999999999 42
Q ss_pred HHHHhhhccceEEEecChhhHHHHHHHHHhc-----CCeEEEEcCCc-cCHHHhhhCC
Q 043517 655 ETRSLMVDNVRVMANASPLDKLLMVQCLKQK-----GEVVAVTGMST-RDAPSLKEAD 706 (956)
Q Consensus 655 ~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~-----g~~v~~iGDG~-ND~~al~~Ad 706 (956)
-.+....|.-..++.+.++.+ .+.++|+||-. .|+-+=...+
T Consensus 110 ----------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 110 ----------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ----------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 013345887777888888765 67899999964 4666544433
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.88 Score=44.72 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=70.4
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHH---HHhc-----CCcccCCCCCCCCCCcceeeechhhh-cCCHH
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLI---AINS-----GLILKPGAEDHSNGYDAAVIEASVFR-SSSEE 655 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~i---a~~~-----Gi~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~ 655 (956)
|..++++.+..+.++ +.|.+++.+|+|+.--+... .++. ++ +. .....+...+- .+..
T Consensus 26 d~~h~g~~~l~~~i~-~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~l--P~---------Gpv~~sP~~l~~al~r- 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIA-DNGYKILYLTARPIGQANRTRSWLAQHQQQGHNL--PD---------GPVLLSPDSLFSALHR- 92 (157)
T ss_pred hhhhhcHHHHHHHHH-HCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccC--CC---------CCEEECCcchhhhhhc-
Confidence 689999999999999 99999999999996555442 2333 44 32 33333322111 1111
Q ss_pred HHHhhhccceEEEecChhhHHHHHHHHHhc-----CCeEEEEcCCccCHHHhhhCCcc
Q 043517 656 TRSLMVDNVRVMANASPLDKLLMVQCLKQK-----GEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 656 ~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~-----g~~v~~iGDG~ND~~al~~AdvG 708 (956)
.+..+-..+.|...++.++.. ....+..|...+|+.+.+++++-
T Consensus 93 ---------Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 ---------EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ---------cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 145555556798988888864 45788899999999999988764
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.49 E-value=0.19 Score=52.72 Aligned_cols=97 Identities=9% Similarity=0.018 Sum_probs=63.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ +++.++|+.....+...-++.|+ ...- ...++++.+..
T Consensus 88 ~~~~gv~~~L~~L~----~~~~ivTn~~~~~~~~~l~~~~l--~~~F-------~~~v~~~~~~~--------------- 139 (221)
T PRK10563 88 EPIAGANALLESIT----VPMCVVSNGPVSKMQHSLGKTGM--LHYF-------PDKLFSGYDIQ--------------- 139 (221)
T ss_pred CcCCCHHHHHHHcC----CCEEEEeCCcHHHHHHHHHhcCh--HHhC-------cceEeeHHhcC---------------
Confidence 35578888888774 89999999998888888888898 3200 11233332111
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEe
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSI 711 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIam 711 (956)
...-.|+-=....+.+.-..+.++++||..+|..+=+.||+.+..
T Consensus 140 -~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 140 -RWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred -CCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 011123333344444443446799999999999999999988653
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=91.46 E-value=0.25 Score=51.50 Aligned_cols=95 Identities=16% Similarity=0.084 Sum_probs=57.3
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHH--HHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhcc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINI--ARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDN 663 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~t--a~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 663 (956)
++.|++.+.++.|+ +.|+++.++|...... ........|+ .+. -..++...
T Consensus 94 ~~~~~~~~~L~~L~-~~g~~l~i~Sn~~~~~~~~~~~~~~~~l-~~~---------fd~v~~s~---------------- 146 (211)
T TIGR02247 94 KLRPSMMAAIKTLR-AKGFKTACITNNFPTDHSAEEALLPGDI-MAL---------FDAVVESC---------------- 146 (211)
T ss_pred ccChhHHHHHHHHH-HCCCeEEEEeCCCCccchhhhHhhhhhh-Hhh---------CCEEEEee----------------
Confidence 57899999999999 9999999999865433 2222233444 111 00111100
Q ss_pred ceEEEecChh--hHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 664 VRVMANASPL--DKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 664 ~~v~ar~~p~--~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
-.....|+ --..+.+.+.-..+.++++||...|+.+=++||+-.
T Consensus 147 --~~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 147 --LEGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred --ecCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 00012332 223333444334567999999999999999999853
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.62 E-value=0.48 Score=48.89 Aligned_cols=96 Identities=7% Similarity=0.038 Sum_probs=60.3
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHh-cCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAIN-SGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~-~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
++.|++.+++++|+ +.|+++.++|.-+.......... .|+ ... -..+++..+
T Consensus 84 ~~~~g~~e~L~~l~-~~g~~~~i~Sn~~~~~~~~~~~~~~~l--~~~--------fd~v~~s~~---------------- 136 (199)
T PRK09456 84 ALRPEVIAIMHKLR-EQGHRVVVLSNTNRLHTTFWPEEYPEV--RAA--------ADHIYLSQD---------------- 136 (199)
T ss_pred ccCHHHHHHHHHHH-hCCCcEEEEcCCchhhHHHHHhhchhH--HHh--------cCEEEEecc----------------
Confidence 47899999999999 99999999999876655443222 344 210 011111110
Q ss_pred eEEEecCh--hhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 665 RVMANASP--LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 665 ~v~ar~~p--~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
.....| +-=..+.+.+.-..+.+.++||...|+.+-+.||+-..
T Consensus 137 --~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 137 --LGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred --cCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 111233 22233444444445789999999999999999988643
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.25 E-value=4 Score=45.82 Aligned_cols=62 Identities=16% Similarity=0.199 Sum_probs=43.6
Q ss_pred hHHHHHHHHHhc-C------CeEEEEcCCccCHHHhhhC-----CccEEeCCCChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 674 DKLLMVQCLKQK-G------EVVAVTGMSTRDAPSLKEA-----DVGVSIGERSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 674 ~K~~iv~~lq~~-g------~~v~~iGDG~ND~~al~~A-----dvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
+|...++.+.+. + ..++++||...|-.|++.. |+||-+| .+.. ...|++.+. +-+.+.+.++
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~--dp~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQ--EPDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCC--CHHHHHHHHH
Confidence 788888877654 2 2489999999999999853 6778777 3221 235888887 5566666554
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=90.17 E-value=2.9 Score=45.16 Aligned_cols=47 Identities=15% Similarity=0.254 Sum_probs=36.9
Q ss_pred EEeeeccc----CcHHHHHHHHHHHhhCCCEEEEEcCCCHHH---HHHHHHhcCC
Q 043517 579 GLVRLKSA----YASEVKQAIEDCRESAGIKIKLILEDDINI---ARLIAINSGL 626 (956)
Q Consensus 579 Gli~~~d~----lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~t---a~~ia~~~Gi 626 (956)
|.+.-.+. +=|++.++|++|+ +.|++++++||++..+ .....+++|+
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~-~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLR-GASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHH-HCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 44444455 7789999999999 9999999999987776 4445566788
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=89.61 E-value=0.85 Score=51.00 Aligned_cols=93 Identities=10% Similarity=0.017 Sum_probs=67.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHh----cCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAIN----SGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMV 661 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~----~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 661 (956)
++.+++.++++.|+ +.|++..++|.-+...+..+-++ +|+ .+. -..
T Consensus 31 ~~~~~~~e~L~~L~-~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~-~~~----------f~~------------------ 80 (320)
T TIGR01686 31 PLHKTLQEKIKTLK-KQGFLLALASKNDEDDAKKVFERRKDFILQ-AED----------FDA------------------ 80 (320)
T ss_pred ccHHHHHHHHHHHH-hCCCEEEEEcCCCHHHHHHHHHhCccccCc-HHH----------eeE------------------
Confidence 45799999999999 99999999999999999999988 777 221 000
Q ss_pred ccceEEEecCh--hhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeC
Q 043517 662 DNVRVMANASP--LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIG 712 (956)
Q Consensus 662 ~~~~v~ar~~p--~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg 712 (956)
+.+.-.| +.-.++.+.+.-....++++||...|+.+.+.+...+.+-
T Consensus 81 ----~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 81 ----RSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ----EEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 1122222 2223333333333478999999999999999988876544
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.54 E-value=0.71 Score=46.95 Aligned_cols=93 Identities=13% Similarity=0.063 Sum_probs=62.1
Q ss_pred cHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEE
Q 043517 588 ASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVM 667 (956)
Q Consensus 588 r~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ 667 (956)
-|+ .+.++.|+ +. ++..++|+.....+...-+..|+ ..- -..++++.+.. .
T Consensus 90 ~~~-~e~L~~L~-~~-~~l~I~T~~~~~~~~~~l~~~~l--~~~--------fd~i~~~~~~~----------------~ 140 (188)
T PRK10725 90 LPL-IEVVKAWH-GR-RPMAVGTGSESAIAEALLAHLGL--RRY--------FDAVVAADDVQ----------------H 140 (188)
T ss_pred ccH-HHHHHHHH-hC-CCEEEEcCCchHHHHHHHHhCCc--HhH--------ceEEEehhhcc----------------C
Confidence 344 58899998 75 89999999999999999999999 330 12223222110 0
Q ss_pred EecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 668 ANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 668 ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
..-.|+--....+.++-....+.++||..+|+.+-+.||+-.
T Consensus 141 ~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 141 HKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred CCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 112233334444444444567899999999999999998763
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.36 E-value=1 Score=48.40 Aligned_cols=47 Identities=11% Similarity=0.184 Sum_probs=40.7
Q ss_pred EEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHh---cCC
Q 043517 579 GLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAIN---SGL 626 (956)
Q Consensus 579 Gli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~---~Gi 626 (956)
|.+.-.+.+-|++.++++.|+ +.|++++++|++...+...++++ +|+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~-~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRIL-DKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHH-HCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 555566778899999999999 99999999999999888888776 577
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=88.30 E-value=0.99 Score=50.25 Aligned_cols=47 Identities=17% Similarity=0.257 Sum_probs=38.9
Q ss_pred EEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHH---HhcCC
Q 043517 579 GLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIA---INSGL 626 (956)
Q Consensus 579 Gli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia---~~~Gi 626 (956)
|.+.-.+.+=|++.++|+.|+ +.|++++++|++...+...++ +++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr-~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLR-SMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHH-HCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 444455667799999999999 999999999999977777776 56787
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.14 E-value=1.3 Score=46.75 Aligned_cols=99 Identities=19% Similarity=0.144 Sum_probs=75.9
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.++.|++.+.+++|+ +.|+.+.+.|+-....+..+.+.+|+ .+. -..++++.+..
T Consensus 85 ~~~~pGv~~~l~~L~-~~~i~~avaS~s~~~~~~~~L~~~gl-~~~---------f~~~v~~~dv~-------------- 139 (221)
T COG0637 85 LKPIPGVVELLEQLK-ARGIPLAVASSSPRRAAERVLARLGL-LDY---------FDVIVTADDVA-------------- 139 (221)
T ss_pred CCCCccHHHHHHHHH-hcCCcEEEecCChHHHHHHHHHHccC-hhh---------cchhccHHHHh--------------
Confidence 368899999999999 99999999999999999999999999 443 33344444332
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
-..=.|+-=..-.+.|.-....+.++.|..|.+.|-++|+.-+-
T Consensus 140 --~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 140 --RGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred --cCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 12334555555555555567889999999999999999998754
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=86.83 E-value=3.1 Score=49.14 Aligned_cols=102 Identities=10% Similarity=-0.109 Sum_probs=63.5
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHh-cCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAIN-SGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~-~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+++++.+ .++ +.|.+ +++|+-...-++.+|++ +|+ +.--.........-..+|.
T Consensus 111 l~~~a~~---~~~-~~g~~-vvVSASp~~~Vepfa~~~LGi--d~VIgTeLev~~~G~~TG~------------------ 165 (497)
T PLN02177 111 VHPETWR---VFN-SFGKR-YIITASPRIMVEPFVKTFLGA--DKVLGTELEVSKSGRATGF------------------ 165 (497)
T ss_pred cCHHHHH---HHH-hCCCE-EEEECCcHHHHHHHHHHcCCC--CEEEecccEECcCCEEeee------------------
Confidence 6676555 445 66754 99999999999999987 899 4200000000001112221
Q ss_pred EEE--ecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCC
Q 043517 666 VMA--NASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGE 713 (956)
Q Consensus 666 v~a--r~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~ 713 (956)
+-. .+.-++|.+-++..........+-||..||.|||+.||-+.+++.
T Consensus 166 i~g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 166 MKKPGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ecCCCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 111 135567877776433212233789999999999999999999983
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=86.52 E-value=1.3 Score=45.53 Aligned_cols=93 Identities=14% Similarity=0.066 Sum_probs=55.1
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.|++.+++++|+ +.+ +.+++|.-+.......-+.+|+ ..-... .-..+ +
T Consensus 75 ~~pG~~e~L~~L~-~~~-~~~i~Tn~~~~~~~~~~~~~~l--~~~f~~----~f~~i----------------------~ 124 (197)
T PHA02597 75 AYDDALDVINKLK-EDY-DFVAVTALGDSIDALLNRQFNL--NALFPG----AFSEV----------------------L 124 (197)
T ss_pred CCCCHHHHHHHHH-hcC-CEEEEeCCccchhHHHHhhCCH--HHhCCC----cccEE----------------------E
Confidence 6799999999999 875 5666677555554445566776 320000 00111 1
Q ss_pred EEecChhhHHHHHH-HHHhcC-CeEEEEcCCccCHHHhhhC--CccEE
Q 043517 667 MANASPLDKLLMVQ-CLKQKG-EVVAVTGMSTRDAPSLKEA--DVGVS 710 (956)
Q Consensus 667 ~ar~~p~~K~~iv~-~lq~~g-~~v~~iGDG~ND~~al~~A--dvGIa 710 (956)
.++.... |.+++. .+++.| +.++++||..+|+.+-++| |+-..
T Consensus 125 ~~~~~~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 125 MCGHDES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred EeccCcc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 1222111 233333 333333 4688999999999999999 98643
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=85.87 E-value=1.4 Score=44.73 Aligned_cols=93 Identities=11% Similarity=0.000 Sum_probs=62.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+++++|+ .+++++|.-+...+....+++|+ ..- -..++.+.+.
T Consensus 84 ~~~~g~~~~L~~L~----~~~~i~Tn~~~~~~~~~l~~~gl--~~~--------fd~i~~~~~~---------------- 133 (184)
T TIGR01993 84 KPDPELRNLLLRLP----GRKIIFTNGDRAHARRALNRLGI--EDC--------FDGIFCFDTA---------------- 133 (184)
T ss_pred CCCHHHHHHHHhCC----CCEEEEeCCCHHHHHHHHHHcCc--Hhh--------hCeEEEeecc----------------
Confidence 36789999999887 36899999999999999999999 320 1112221111
Q ss_pred EEEe---cCh--hhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 666 VMAN---ASP--LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 666 v~ar---~~p--~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
-.+ ..| +-=..+++.+....+.++++||...|+.+=+.||+-.
T Consensus 134 -~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 134 -NPDYLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred -cCccCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 111 233 2224445555545678999999999999999888754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=85.71 E-value=0.84 Score=48.31 Aligned_cols=89 Identities=16% Similarity=0.110 Sum_probs=56.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHH---HHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINI---ARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVD 662 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~t---a~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 662 (956)
+.=|++.+.++.++ +.|++|+.+|||+... +..=-++.|+ ... ...++.+..-..
T Consensus 115 ~aip~a~~l~~~~~-~~G~~V~~iT~R~~~~r~~T~~nL~~~G~--~~~--------~~l~lr~~~~~~----------- 172 (229)
T PF03767_consen 115 PAIPGALELYNYAR-SRGVKVFFITGRPESQREATEKNLKKAGF--PGW--------DHLILRPDKDPS----------- 172 (229)
T ss_dssp EEETTHHHHHHHHH-HTTEEEEEEEEEETTCHHHHHHHHHHHTT--STB--------SCGEEEEESSTS-----------
T ss_pred cccHHHHHHHHHHH-HCCCeEEEEecCCchhHHHHHHHHHHcCC--Ccc--------chhccccccccc-----------
Confidence 45588999999999 9999999999998652 2333456677 320 111111110000
Q ss_pred cceEEEecChhhHHHHHHHHHhcC-CeEEEEcCCccCHHH
Q 043517 663 NVRVMANASPLDKLLMVQCLKQKG-EVVAVTGMSTRDAPS 701 (956)
Q Consensus 663 ~~~v~ar~~p~~K~~iv~~lq~~g-~~v~~iGDG~ND~~a 701 (956)
.....+.|..--+.++++| ++++.+||..+|...
T Consensus 173 -----~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 173 -----KKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp -----S------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred -----cccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 0001234778888888885 588999999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=85.18 E-value=1.2 Score=42.25 Aligned_cols=32 Identities=13% Similarity=0.167 Sum_probs=28.9
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHH
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIA 617 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta 617 (956)
+++.+++.+++++++ +.|++++++|||+....
T Consensus 23 ~~~~~~~ie~L~~l~-~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYK-ALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHH-HCCCEEEEECCCCchhh
Confidence 678899999999999 99999999999987653
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.50 E-value=5.1 Score=40.71 Aligned_cols=51 Identities=18% Similarity=0.290 Sum_probs=42.9
Q ss_pred cEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHH---HhcCC
Q 043517 575 LTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIA---INSGL 626 (956)
Q Consensus 575 l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia---~~~Gi 626 (956)
+.+-|.+..+|..-|++.++++.|+ .++.+|..+|.-..++-+.+. +++|+
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr-~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLR-DQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHH-hcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 3567999999999999999999999 999999999877766665555 45787
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=84.38 E-value=3.3 Score=43.99 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=29.9
Q ss_pred ecChhhHHHHHHHHHhcC-------CeEEEEcCCccCHHHhhhC------CccEEeCCCChHHHHhcCCeeecc
Q 043517 669 NASPLDKLLMVQCLKQKG-------EVVAVTGMSTRDAPSLKEA------DVGVSIGERSAQFARDCSDIVILD 729 (956)
Q Consensus 669 r~~p~~K~~iv~~lq~~g-------~~v~~iGDG~ND~~al~~A------dvGIamg~~~~~~ak~~Ad~vl~~ 729 (956)
|..-..|...++.+-+.. ..++++||...|-.|++.. +++|-++......-...|++-+.+
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 333345888888776653 3699999999999998753 667888732222233456665553
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=82.56 E-value=7.2 Score=41.94 Aligned_cols=89 Identities=16% Similarity=0.094 Sum_probs=53.2
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHH----HHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHh
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINI----ARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSL 659 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~t----a~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 659 (956)
+.|.=|++.+..+.++ +.|++|+++|||.... ...+ ++.|+ .. + ..+++.+..-
T Consensus 143 ~ApAlp~al~ly~~l~-~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy--~~-~-------~~LiLR~~~D---------- 200 (275)
T TIGR01680 143 EAPALPETLKNYNKLV-SLGFKIIFLSGRLKDKQAVTEANL-KKAGY--HT-W-------EKLILKDPQD---------- 200 (275)
T ss_pred cCCCChHHHHHHHHHH-HCCCEEEEEeCCchhHHHHHHHHH-HHcCC--CC-c-------ceeeecCCCC----------
Confidence 3456689999999999 9999999999998643 2223 34677 32 0 1122211000
Q ss_pred hhccceEEEecChhhHHHHHHHHHhcCC-eEEEEcCCccCHH
Q 043517 660 MVDNVRVMANASPLDKLLMVQCLKQKGE-VVAVTGMSTRDAP 700 (956)
Q Consensus 660 ~~~~~~v~ar~~p~~K~~iv~~lq~~g~-~v~~iGDG~ND~~ 700 (956)
--.....+.|...-+.+.++|+ +++.+||-.+|..
T Consensus 201 ------~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~ 236 (275)
T TIGR01680 201 ------NSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLK 236 (275)
T ss_pred ------CccchhHHHHHHHHHHHHHcCceEEEEECCCHHhcc
Confidence 0000011235444455555654 7889999999973
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 956 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 5e-27 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 6e-27 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-25 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-24 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 5e-24 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-23 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 2e-23 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 2e-23 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 7e-10 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 1e-07 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 1e-06 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 2e-06 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 6e-06 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 7e-06 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 9e-06 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 3e-05 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 956 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 4e-83 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 7e-75 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-74 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-60 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 6e-21 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 3e-54 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 6e-24 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-11 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-07 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 6e-06 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-05 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 6e-05 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-05 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-04 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-04 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 289 bits (741), Expect = 4e-83
Identities = 187/1061 (17%), Positives = 370/1061 (34%), Gaps = 216/1061 (20%)
Query: 15 EQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLS 74
+++ + + + HQ + + +T+ G+S G N L
Sbjct: 37 KRKEKLENMKKEMEINDHQLS-VAELEQKYQTSATKGLSASLAA--ELLLRDGPNALR-- 91
Query: 75 LENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVF-VV 133
P + + L+ A + L+ + D + +
Sbjct: 92 ------PPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALA 145
Query: 134 ISSVVCISSLFRFVKNW--------INELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVG 185
+ +VV ++ F + + + L+ + V+RDG QI ++VVG
Sbjct: 146 LIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQ-------ATVIRDGDKFQINADQLVVG 198
Query: 186 DVVCLQTGDQVPADGLFVHGKNLKLD---------------DGDDKLP-----CIFTGAK 225
D+V ++ GD+VPAD + + K+D + + P F
Sbjct: 199 DLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTM 258
Query: 226 VVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSL 285
+ G LV + G+ T + L S + +++ + I ++ ++
Sbjct: 259 CLEGTAQGLVVNTGDRTIIGRIASLASGVEN------EKTPIAIEIEHFVD-----IIAG 307
Query: 286 SLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEML- 344
++ F + +
Sbjct: 308 LAILFGATF---FIVA--------------------------MCIGYTF------LRAMV 332
Query: 345 ---SILV-FVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKT-- 398
+I+V +V +GLL + +CL+ +K+L +NL +LG + IC+ KT
Sbjct: 333 FFMAIVVAYVP-EGLLAT-VTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGT 390
Query: 399 --------SDLSLDHANMAELWIATDNSFIKSTSADVLDALREAI-----ATTSYDEAAV 445
S L D+ + + S++ AL + A + AV
Sbjct: 391 LTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAV 450
Query: 446 DDDD----------ALLLWAKEFLDVDGDKMKQNCTVEA---FNISKNRAGLLLKW---- 488
ALL ++ E + ++ FN S N K+
Sbjct: 451 PVPKRIVIGDASETALLKFS-ELTLGNAMGYRERFPKVCEIPFN-STN------KFQLSI 502
Query: 489 NGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHS 548
+ E D + +G+PE +L C+ L G LDE R+AF +
Sbjct: 503 HTLEDPRDPRHVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGL--G 559
Query: 549 LRCISFACKRVEQQN-------EEEIIELTECGLTWLGLV------RLKSAYASEVKQAI 595
R + F + +++ + E + GL++ GLV R + V A+
Sbjct: 560 ERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPR------ATVPDAV 613
Query: 596 EDCRESAGIKIKLILEDDINIARLIAINSGLI--------------LKPGAEDHSNGYDA 641
CR +AGI++ ++ D A+ IA + G+I P + + A
Sbjct: 614 LKCR-TAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARA 672
Query: 642 AVIEASVFRSSSEETRSLMVDNVR--VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDA 699
VI + + V A SP KL++V+ ++ G +VAVTG D+
Sbjct: 673 CVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDS 732
Query: 700 PSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTV 759
P+LK+AD+GV++G + A++ +D+++LD+NF +I ++ GR + +N++K I LT
Sbjct: 733 PALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTK 792
Query: 760 NAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS----LRVQLPAHATA 815
N L+ +PL +L++ L D+ +++LA + + ++
Sbjct: 793 NIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRD 852
Query: 816 AASASPLANKTVWRNIILQVL---------YQVFVLSATQLKGNELLQVQANKTDLK--- 863
PLA + ++ +Q G + DL+
Sbjct: 853 RLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSY 912
Query: 864 -----------------AIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVG 906
+ F S +CQ+ ++ + L+ F+ +G +N ++ +
Sbjct: 913 GQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKT-RRLSAFQ-QGFFRNRILVIAIV 970
Query: 907 FIFILDIAVIEM--VTVVTHGTRMDLKDWCVCIGIAVMTLP 945
F + + + + + + + W V + ++
Sbjct: 971 FQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFV 1011
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 263 bits (674), Expect = 7e-75
Identities = 154/957 (16%), Positives = 322/957 (33%), Gaps = 175/957 (18%)
Query: 37 IQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIK 96
I+ + L+ + + G++ QE E R Q+FG N LE + G +
Sbjct: 19 IEEVFQQLKCSRE-GLTTQEGE--DRIQIFGPN----KLEEKKESKLLKFLGFM-----W 66
Query: 97 DSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVK-----NWI 151
+ ++ A +++ L G FV I ++ I+S F++ N
Sbjct: 67 NPLSWVMEMAAIMAIALANG-----DGRPPDWQDFVGIICLLVINSTISFIEENNAGNAA 121
Query: 152 NELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLD 211
L+ + + KV+RDG+ + + +V GD+V ++ GD +PAD + G LK+D
Sbjct: 122 AALM--AGLAPKT--KVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVD 177
Query: 212 DGD--------DKLP--CIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQD 261
K P +F+G+ GE +V + G +T L+ ++
Sbjct: 178 QSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ----- 232
Query: 262 YKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIM 321
Q + +G + + +V++++ +
Sbjct: 233 --VGHFQKVLTAIG----NFCICSIAIGMVIEIIVMYPI--------------------- 265
Query: 322 GEVVTKFIRRQGATSHNRYVEM----LSILVFVSRDGLLPIGLF----ICLAYASKKLPC 373
+Y + L +L+ G +PI + + +A S +L
Sbjct: 266 --------------QRRKYRDGIDNLLVLLI-----GGIPIAMPTVLSVTMAIGSHRLSQ 306
Query: 374 FRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALRE 433
A + + + + +C+ KT L+L+ ++ + + + L
Sbjct: 307 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVF-----CKGVEKDQVLLF 361
Query: 434 AIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEA---FNISKNRAGLLLKWNG 490
A A S E D A++ D + + FN R L
Sbjct: 362 A-AMASRVENQDAIDAAMVGMLA-----DPKEARAGIREVHFLPFNPVDKRTALTYI--- 412
Query: 491 SESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLR 550
DG + H +G+PE IL + + I LR
Sbjct: 413 ---DGSGNWHRVSKGAPEQILELAK-----------ASNDLSKKVLSIIDKY--AERGLR 456
Query: 551 CISFACKRVEQQNEEEIIELTECGLTWLGLV------RLKSAYASEVKQAIEDCRESAGI 604
++ A + V ++ +E ++GL+ R + + I G+
Sbjct: 457 SLAVARQVVPEKTKESP----GAPWEFVGLLPLFDPPR------HDSAETIRRALN-LGV 505
Query: 605 KIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDA-AVIEASVFRSSSEETRSLMVDN 663
+K+I D + I + G+ +N Y + A++ + + +++
Sbjct: 506 NVKMITGDQLAIGKETGRRLGMG--------TNMYPSSALLGTHKDANLASIPVEELIEK 557
Query: 664 VRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCS 723
A P K +V+ L+++ +V +TG DAP+LK+AD+G+++ + AR S
Sbjct: 558 ADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAS 616
Query: 724 DIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQ 783
DIV+ + + I + + R + ++ + +++ + E F
Sbjct: 617 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRI-VFGFMLIALIWEFDFSAFM 675
Query: 784 LLWVNLIMDVLGALALAAPVSLRVQLPAHATAAASASPLANKTVWRNIILQV----LYQV 839
+L + ++ D + ++ P + V + +
Sbjct: 676 VLIIAILNDGT-IMTISKDRVKPSPTPDS----WKLKEIFATGVVLGGYQAIMTVIFFWA 730
Query: 840 FVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNP 899
+ + ++ N +L V+ + ++ R + P
Sbjct: 731 AHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRS-------RSWSFVERP 783
Query: 900 WFLVIVGFIFILDIAVIEMVTVVTHGTRM---DLKDWCVCIGIAVMTLPTGLVAKCI 953
L+++ F+ IA + V ++ V +++T V K
Sbjct: 784 GALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFA 840
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 262 bits (671), Expect = 3e-74
Identities = 160/959 (16%), Positives = 318/959 (33%), Gaps = 206/959 (21%)
Query: 44 LETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILL 103
L+T+ +G++ +E+ +RR+ +G N ++ ++ G ++
Sbjct: 80 LQTDTRVGLTSEEVV--QRRRKYGLN----QMKEEKENHFLKFLGFF-----VGPIQFVM 128
Query: 104 LCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFV-----KNWINELLVSK 158
A L+ L +D F VI ++ ++++ FV + ++EL K
Sbjct: 129 EGAAVLAAGLE--------DWVD----FGVICGLLLLNAVVGFVQEFQAGSIVDEL---K 173
Query: 159 RTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGK-NLKLD------ 211
+T A V+RDG +++I EVV GD++ ++ G +PADG V L++D
Sbjct: 174 KTLALKA-VVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTG 232
Query: 212 -------DGDDKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKE 264
D +F + V GE +++T+ G+NT L++
Sbjct: 233 ESLAVDKHKGD---QVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASG------GS 283
Query: 265 SKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEV 324
++ +G+ + + + L+V V
Sbjct: 284 GHFTEVLNGIGTILLILVIFTLLIVWVSSFY----------------------------- 314
Query: 325 VTKFIRRQGATSHNRYVEM----LSILVFVSRDGLLPIGL----FICLAYASKKLPCFRA 376
N V++ L+I + +P+GL +A + L +A
Sbjct: 315 -----------RSNPIVQILEFTLAITI-----IGVPVGLPAVVTTTMAVGAAYLAKKKA 358
Query: 377 TARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIA 436
+ L SL V +C+ KT L+ + ++ + + D++
Sbjct: 359 IVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV-----DPEDLM----LTAC 409
Query: 437 TTSYDEAAVDD--DDALLLWAKEFLDVDGDKMKQNCTVEA-FNISKNRAGLLLKWNGSES 493
+ + D D A L K + K F+ + +++
Sbjct: 410 LAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVE------ 463
Query: 494 DGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCIS 553
+G+P +L + E A+ N + + R +
Sbjct: 464 SPQGERITCVKGAPLFVLKTVEED-------HPIPEEVDQAYKNKVAEF--ATRGFRSLG 514
Query: 554 FACKRVEQQNEEEIIELTECGLTWLGLV------RLKSAYASEVKQAIEDCRESAGIKIK 607
A KR E LG++ R + + + + + G+ IK
Sbjct: 515 VARKRGEG------------SWEILGIMPCMDPPR------HDTYKTVCEAKT-LGLSIK 555
Query: 608 LILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVM 667
++ D + IAR + GL +N Y+A + V+
Sbjct: 556 MLTGDAVGIARETSRQLGLG--------TNIYNAERLGLGGGGDMPGSEVYDFVEAADGF 607
Query: 668 ANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVI 727
A P K +V+ L+Q+G +VA+TG DAPSLK+AD G+++ S+ AR +DIV
Sbjct: 608 AEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVF 666
Query: 728 LDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWV 787
L I LK R + + + ++ + ++ L I L ++++
Sbjct: 667 LAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIF-LGLWIAILNRSLNIELVVFI 725
Query: 788 NLIMDVLGALALA--------APVSLRVQLPAHATAAASASPLANKTVWRNIILQVLYQV 839
+ D + LA+A PV + +W +L +
Sbjct: 726 AIFAD-VATLAIAYDNAPYSQTPVKWNL-----------------PKLWGMSVLLGVVLA 767
Query: 840 ---FVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEGKGLH 896
++ T E + N ++ ++F L + +++ R G
Sbjct: 768 VGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRA-------NGPFWS 820
Query: 897 QNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCIPM 955
P + + + +A + + + + I
Sbjct: 821 SIPSWQLSGAIFLVDILATCFTIWGWFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQ 879
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 223 bits (570), Expect = 1e-60
Identities = 104/489 (21%), Positives = 192/489 (39%), Gaps = 57/489 (11%)
Query: 505 GSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNE 564
G+PE ++ C + T + ++ + I++ +LRC++ A + + E
Sbjct: 517 GAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE 575
Query: 565 EEIIELT------ECGLTWLGLV------RLKSAYASEVKQAIEDCRESAGIKIKLILED 612
E +++ + E LT++G+V R EV +I+ CR+ AGI++ +I D
Sbjct: 576 EMVLDDSSRFMEYETDLTFVGVVGMLDPPR------KEVMGSIQLCRD-AGIRVIMITGD 628
Query: 613 DINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASP 672
+ A I G I E F + A P
Sbjct: 629 NKGTAIAICRRIG-IFGENEEVAD-----RAYTGREFDDLPLAEQREACRRACCFARVEP 682
Query: 673 LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENF 732
K +V+ L+ E+ A+TG DAP+LK+A++G+++G +A A+ S++V+ D+NF
Sbjct: 683 SHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTA-VAKTASEMVLADDNF 741
Query: 733 TTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMD 792
+TI A ++ GR + NN+++FI+ ++ N + A L P QLLWVNL+ D
Sbjct: 742 STIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTD 801
Query: 793 VLGALALA-----------APVSLRVQLPAH---------------ATAAASASPLANKT 826
L A AL P S + L + AT A+A
Sbjct: 802 GLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAE 861
Query: 827 VWRNIILQVLYQVFVLSATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLINAREIEA 886
+ L + L + + + V ++ +N+
Sbjct: 862 DGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQ 921
Query: 887 LNIFEGKGLHQNPWFLVIVGFIFILDIAVIEM--VTVVTHGTRMDLKDWCVCIGIAVMTL 944
++ N W L + L ++ + + ++ +DL W + + I++ +
Sbjct: 922 -SLMR-MPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVI 979
Query: 945 PTGLVAKCI 953
+ K I
Sbjct: 980 GLDEILKFI 988
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 6e-21
Identities = 78/407 (19%), Positives = 140/407 (34%), Gaps = 107/407 (26%)
Query: 37 IQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIK 96
+ A + G++ +++ R + +G N L L+ + +
Sbjct: 10 TEECLAYFGVSETTGLTPDQVK--RHLEKYGHNEL--------PAEEGKSLWELVIEQFE 59
Query: 97 DSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNW------ 150
D V +LL A +S +L G E + + VI ++ +++ +
Sbjct: 60 DLLVRILLLAACISFVLAWFEEGEE--TITAFVEPFVILLILIANAIVGVWQERNAENAI 117
Query: 151 --INELLVSKRTSRRAAVKVMRDGR--VRQIAVSEVVVGDVVCLQTGDQVPADG--LFVH 204
+ E KV R R V++I ++V GD+V + GD+VPAD L +
Sbjct: 118 EALKEYEPEM-------GKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK 170
Query: 205 GKNLKLD-------------------DGD----DKLPCIFTGAKVVGGECSMLVTSVGEN 241
L++D D DK +F+G + G+ +V + G +
Sbjct: 171 STTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVS 230
Query: 242 TETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQV--LGCFA 299
TE + ++ + ++ LQ +D G LS + +I V V +
Sbjct: 231 TEIGKIRDQMA------ATEQDKTPLQQKLDEFGE-----QLSKVISLICVAVWLINIGH 279
Query: 300 WGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSRDGL---- 355
+ D H G + I V L
Sbjct: 280 FNDPVHGGSWIRGA---------------------------IYYFKIAV-----ALAVAA 307
Query: 356 ----LPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKT 398
LP + CLA ++++ A R+LP +LG + IC+ KT
Sbjct: 308 IPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKT 354
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 204 bits (520), Expect = 3e-54
Identities = 106/509 (20%), Positives = 193/509 (37%), Gaps = 85/509 (16%)
Query: 505 GSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQN- 563
G+PE IL C+ L +G + L E ++AF N ++ R + F + +
Sbjct: 514 GAPERILDRCSTILL-NGAEEPLKEDMKEAFQNAYLELGGL--GERVLGFCHFALPEDKY 570
Query: 564 ------EEEIIELTECGLTWLGLV------RLKSAYASEVKQAIEDCRESAGIKIKLILE 611
+ + L ++GL+ R + V A+ CR SAGIK+ ++
Sbjct: 571 NEGYPFDADEPNFPTTDLCFVGLMAMIDPPR------AAVPDAVGKCR-SAGIKVIMVTG 623
Query: 612 DDINIARLIAINSGLI--------------LKPGAEDHSNGYDAAVIEASVFRSSSEETR 657
D A+ IA G+I P + + A V+ S + S E
Sbjct: 624 DHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVL 683
Query: 658 SLMVDNVR--VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERS 715
++ V A SP KL++V+ +++G +VAVTG D+P+LK+AD+GV++G
Sbjct: 684 DDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISG 743
Query: 716 AQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCG 775
+ ++ +D+++LD+NF +I ++ GR + +N++K I LT N LV I
Sbjct: 744 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNV 803
Query: 776 EIPLEPFQLLWVNLIMDVLGALALAA-PVSLRV--QLPAHATAAASASPLANKTVWRNII 832
+PL +L ++L D++ A++LA + + P + L N+ +
Sbjct: 804 PLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRN----PKTDKLVNERLISMAY 859
Query: 833 LQV--------------LYQVFVLSATQLKGNELLQVQANKTDL---------------- 862
Q+ + L G + +D+
Sbjct: 860 GQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIV 919
Query: 863 ----KAIVFNSFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEM 918
F S V+ Q LI + +IF + +N + + L +
Sbjct: 920 EFTCHTSFFISIVVVQWADLIICKTRR-NSIF--QQGMKNKILIFGLFEETALAAFLSYC 976
Query: 919 --VTVVTHGTRMDLKDWCVCIGIAVMTLP 945
V + W +++
Sbjct: 977 PGTDVALRMYPLKPSWWFCAFPYSLIIFL 1005
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 6e-24
Identities = 74/420 (17%), Positives = 134/420 (31%), Gaps = 108/420 (25%)
Query: 15 EQETVKKLAENDSYTTFHQSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLS 74
+ + +KK H+ + + T+L G++ + G N LT
Sbjct: 36 DLDELKKEVS----MDDHKLS-LDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLT-- 86
Query: 75 LENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLL-GIKRNGFEQGILDGAMVFVV 133
P + + ILL A L L GI+ ++ D + VV
Sbjct: 87 ------PPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVV 140
Query: 134 ISSVVCISSLFRFVKNW--------INELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVG 185
+S+VV ++ F + + ++ + V+RDG I VV G
Sbjct: 141 LSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQ-------ALVIRDGEKSTINAEFVVAG 193
Query: 186 DVVCLQTGDQVPADGLFVHGKNLKLD---------------------DGDDKLPCI-FTG 223
D+V ++ GD++PAD + K+D + + I F
Sbjct: 194 DLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETR--NIAFFS 251
Query: 224 AKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWL 283
V G +V G+ T + L S + + + I ++ +
Sbjct: 252 TNCVEGTARGVVVYTGDRTVMGRIATLASGLEV------GRTPIAIEIEHFI-----HII 300
Query: 284 SLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEM 343
+ + + V F I +E
Sbjct: 301 TGVAVFLGVSF---FILS--------------------------LILGYSW------LEA 325
Query: 344 L----SILV-FVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKT 398
+ I+V V +GLL + +CL +K++ +NL +LG + IC+ KT
Sbjct: 326 VIFLIGIIVANVP-EGLLAT-VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKT 383
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 82.2 bits (202), Expect = 5e-16
Identities = 73/459 (15%), Positives = 140/459 (30%), Gaps = 123/459 (26%)
Query: 418 SFIKSTSA-DVLDALREAIATTSYDEAAVDDDDA----LLLWAKEFLDVDGDKMKQNCTV 472
+F+ + DV D + ++ D + D L W L KQ V
Sbjct: 28 AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWT--LLS------KQEEMV 79
Query: 473 EAF---NISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDR-HGTLQTLD 528
+ F + N L+ + P ++ M DR + Q
Sbjct: 80 QKFVEEVLRINYKFLMSPIKTEQRQ------------PSMMTRMYIEQRDRLYNDNQVFA 127
Query: 529 EHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYA 588
++ N R + LR + + + + + + G+ G K+ A
Sbjct: 128 KY------NVSR--LQPYLKLR------QALLELRPAKNVLI--DGVLGSG----KTWVA 167
Query: 589 SEVKQAIE-DCRESAGI---------KIKLILEDDINIARLIAINSGLILKPGAEDHSN- 637
+V + + C+ I + +LE + I N ++ SN
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN----WTSRSDHSSNI 223
Query: 638 --GYDAAVIEASVFRSSSEETRSLMV-DNVRVMANASPLDKLLMVQCLKQKGEVVAVTGM 694
+ E S L+V NV+ NA + + C K + +T
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLNVQ---NAKAWNAFN-LSC-K-----ILLT-- 271
Query: 695 STRDA-------------PSLKEADVGVSIGERSAQFAR----DCSDI--VILDEN---F 732
TR SL + ++ E + + D+ +L N
Sbjct: 272 -TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL 330
Query: 733 TTIAANLK--------WGRCVCNNIRKFIQLHLTV-NAAAFAVNLVA-AIFCGE--IPLE 780
+ IA +++ W C+ + I+ L V A + ++F IP
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI 390
Query: 781 PFQLLWVNL-------IMDVLGALALAA--PVSLRVQLP 810
L+W ++ +++ L +L P + +P
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 66.0 bits (160), Expect = 5e-11
Identities = 69/555 (12%), Positives = 160/555 (28%), Gaps = 141/555 (25%)
Query: 145 RFVK-------NWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVC-------L 190
+FV+ ++ + +++ ++ + R R ++V V L
Sbjct: 81 KFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL 140
Query: 191 QTG--DQVPADGLFVHG-----KN-LKLDD-GDDKLPCIFTGAKVVGGECSMLVTSVGEN 241
+ + PA + + G K + LD K+ C + + ++
Sbjct: 141 RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM--------DFKIFWLNLKNC 192
Query: 242 TETSMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSL---------SLLVIVV 292
++++L K ++ S ++ + L LLV+
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-- 250
Query: 293 QVLGCFAWGDDDHDPEPKGGVRSTVK------EIMGEVVTKFI----RRQGATSHNRYVE 342
+ + + +I+ + T+F AT+ + ++
Sbjct: 251 ---------LNVQNAK-------AWNAFNLSCKIL--LTTRFKQVTDFLSAATTTHISLD 292
Query: 343 MLSILVFVSRDGLLPIGLFI-CLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDL 401
S + + L + L + LP R P L ++
Sbjct: 293 HHS-MTLTPDEVK---SLLLKYLDCRPQDLP--REVLTTNPR--RLSIIAESIR------ 338
Query: 402 SLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDAL-------LLW 454
D + W + + + L+ L A +D +V A L+W
Sbjct: 339 --DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW 396
Query: 455 AKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMC 514
+ + + L+ K ++++ I I L +
Sbjct: 397 FDVIKSDVMVVVNKLH----------KYSLVEKQP-----KESTISIP-----SIYLELK 436
Query: 515 THYLDR---HGTL-QTLDEHKRDAFNNFIRDIEAN-------HHSLRCISFACKRVEQQN 563
+ H ++ + K ++ I HH L+ + E+
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH-LK----NIEHPERMT 491
Query: 564 EEEIIELTECGLTWLGLVRLK-SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAI 622
++ L +L +++ + A +I + + I ++D RL+
Sbjct: 492 LFRMVFLD---FRFLE-QKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV-- 545
Query: 623 NSGLILK--PGAEDH 635
IL P E++
Sbjct: 546 --NAILDFLPKIEEN 558
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 1e-07
Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Query: 505 GSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNE 564
G+ + IL++C+ +G + LD+ + N LR ++ A K + +
Sbjct: 88 GALQEILNVCSQVRH-NGEIVPLDDIMLRKIKRVTDTL--NRQGLRVVAVATKYLPAREG 144
Query: 565 EEIIELTECGLTWLGLV 581
+ E L G +
Sbjct: 145 DYQRAD-ESDLILEGYI 160
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 47.8 bits (115), Expect = 6e-06
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD 724
+N SP DK+ +++ LKQ G V + G DA +L ADV V++G +++ +D
Sbjct: 177 EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGN-GVDISKNVAD 235
Query: 725 IVILDENFTTIAANLKWGRCVCNNIR 750
I+++ + T+ +K + + N I
Sbjct: 236 IILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 1e-05
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD 724
+V+A P DK +V LK KG +VA+ G DAP+L +AD+G+++G A + +
Sbjct: 595 KVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAG 653
Query: 725 IVILDENFTTIAANLKWGRCVCNNIR 750
+ +L + IA + +NIR
Sbjct: 654 VTLLHGDLRGIAKARRLSESTMSNIR 679
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 6e-05
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 165 AVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHG 205
A ++ DG ++++ V VGD++ ++ G+++P DG G
Sbjct: 227 AHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEG 267
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 2e-05
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 166 VKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHG 205
V+RDG+ + V EV VGD+V ++ G+++P DG+ V G
Sbjct: 14 AVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 53
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 1e-04
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD 724
V+A P K V+ L Q EVVA G DAP+L +AD+G+++G + A + D
Sbjct: 498 LVIAEVLPHQKSEEVKKL-QAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGD 555
Query: 725 IVILDENFTTIAANLKWGRCVCNNIR 750
IV++ ++ + A ++ R + I+
Sbjct: 556 IVLIRDDLRDVVAAIQLSRKTMSKIK 581
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 3e-04
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 166 VKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHG 205
V+RDG+ + V EV VGD+V ++ G+++P DG+ V G
Sbjct: 213 AVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 7e-04
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD 724
V+A P K V+ L Q EVVA G DAP+L +AD+G+++G + A + D
Sbjct: 576 LVIAEVLPHQKSEEVKKL-QAKEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGD 633
Query: 725 IVILDENFTTIAANLKWGRCVCNNIR 750
IV++ ++ + A ++ R + I+
Sbjct: 634 IVLIRDDLRDVVAAIQLSRKTMSKIK 659
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 956 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.94 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.95 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.92 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.82 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.8 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.77 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.77 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.41 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.28 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.27 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.25 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.17 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.17 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.16 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.15 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.12 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.11 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.09 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.08 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.05 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.05 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.05 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.02 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.01 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.97 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.96 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.94 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.94 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.82 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.81 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.81 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.76 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.76 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.76 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.75 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.74 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.71 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.7 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.69 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.66 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.65 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.63 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.63 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.62 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.59 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.54 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.53 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.52 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.51 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.42 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.42 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.38 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.38 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.37 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.35 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.33 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.33 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.32 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.25 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.24 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.24 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.23 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.18 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.18 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.15 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.14 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.14 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.12 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.11 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.09 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.08 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.08 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.08 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.05 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.03 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.02 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.99 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.97 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.95 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.95 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.94 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.93 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.92 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.89 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.88 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.86 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.83 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.83 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.81 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.8 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.8 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.79 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.78 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.75 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.75 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.71 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.7 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.68 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.67 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.66 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.64 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.62 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.56 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.53 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.46 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.42 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.41 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.39 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.3 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.26 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.24 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.22 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.21 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.15 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.12 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.1 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.05 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 97.04 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.97 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.9 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.84 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.64 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.62 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.51 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.46 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.44 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.38 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.25 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.24 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.03 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.79 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 95.57 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.37 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 95.32 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 94.67 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.61 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.52 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 93.65 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 93.57 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 91.71 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 91.16 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 90.69 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 88.84 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 88.09 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 86.14 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 84.67 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 83.94 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 81.98 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 80.62 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-125 Score=1190.77 Aligned_cols=850 Identities=20% Similarity=0.311 Sum_probs=730.5
Q ss_pred hhCCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 043517 33 QSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLL 112 (956)
Q Consensus 33 ~~~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~ 112 (956)
+..+++++++.|++|+.+|||+ +|+++|+++||+|+++ +++.+++|+.+++||++|++++++++++++++
T Consensus 54 ~~~~~~~~~~~l~~~~~~GLs~--~ea~~rl~~~G~N~l~--------~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~ 123 (1034)
T 3ixz_A 54 HQLSVAELEQKYQTSATKGLSA--SLAAELLLRDGPNALR--------PPRGTPEYVKFARQLAGGLQCLMWVAAAICLI 123 (1034)
T ss_pred hhCCHHHHHHHhCCCcccCCCH--HHHHHHHHhhCCCCCC--------CCCCCCHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 4458999999999999999999 9999999999999999 78889999999999999999999999999877
Q ss_pred hccc---cC--CCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcE
Q 043517 113 LGIK---RN--GFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDV 187 (956)
Q Consensus 113 ~~~~---~~--~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDi 187 (956)
.+.. .. .....|+++++++++++++.+++.++|+++++++++| +...+++++|+|||++++|+++|||||||
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L---~~l~~~~a~ViRdG~~~~I~~~eLv~GDi 200 (1034)
T 3ixz_A 124 AFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASF---KNLVPQQATVIRDGDKFQINADQLVVGDL 200 (1034)
T ss_pred HHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHH---hccCCCeeEEEECCEEEEEEHHHCCCCcE
Confidence 5421 11 1123477888888888889999999999999999999 56678899999999999999999999999
Q ss_pred EEeCCCCcccccEEEEeeCCceecccC--------------------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHH
Q 043517 188 VCLQTGDQVPADGLFVHGKNLKLDDGD--------------------DKLPCIFTGAKVVGGECSMLVTSVGENTETSML 247 (956)
Q Consensus 188 V~l~~G~~vPaD~~ll~g~~l~vdes~--------------------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i 247 (956)
|.|++||+|||||+|++|+++.||||+ +.+|++|+||.|.+|+++++|++||.+|.+|||
T Consensus 201 V~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI 280 (1034)
T 3ixz_A 201 VEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRI 280 (1034)
T ss_pred EEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHH
Confidence 999999999999999999988999999 235789999999999999999999999999999
Q ss_pred HHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHH
Q 043517 248 MKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTK 327 (956)
Q Consensus 248 ~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (956)
++++...+ .+++|+++.++++..++..++++++++++++++. .+ . ++.
T Consensus 281 ~~~~~~~~------~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~------~-----------~~~------ 328 (1034)
T 3ixz_A 281 ASLASGVE------NEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMC---IG------Y-----------TFL------ 328 (1034)
T ss_pred HHhhcccc------cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc------c-----------hHH------
Confidence 99998888 8899999999999999999988888877776532 22 1 233
Q ss_pred HhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceE
Q 043517 328 FIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHAN 407 (956)
Q Consensus 328 ~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~ 407 (956)
..+.+++++++++|||+ ||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+
T Consensus 329 ----------~~~~~~i~l~v~~iPe~-Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~ 397 (1034)
T 3ixz_A 329 ----------RAMVFFMAIVVAYVPEG-LLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMT 397 (1034)
T ss_pred ----------HHHHHHHHHHHheeccc-cHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEE
Confidence 78889999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCcccccCC----------CCHHHHHHHHHHHHhcCCCC---------------CCCCcHHHHHHHHHhhcCCC
Q 043517 408 MAELWIATDNSFIKS----------TSADVLDALREAIATTSYDE---------------AAVDDDDALLLWAKEFLDVD 462 (956)
Q Consensus 408 v~~i~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~~---------------~~~p~e~Al~~~~~~~~~~~ 462 (956)
|.+++..+..+..+. ......+.+..++++||++. ..+|+|.|+++++. +.+.+
T Consensus 398 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~-~~~~~ 476 (1034)
T 3ixz_A 398 VSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSE-LTLGN 476 (1034)
T ss_pred EEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHH-HhCCC
Confidence 999998765443210 11223345666778887653 13589999999998 77776
Q ss_pred hhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHH
Q 043517 463 GDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFI 539 (956)
Q Consensus 463 ~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~ 539 (956)
....+..++ ++||+|+||+|++++...+. .+++ +.+|+|||||.|+++|+++.. +|...+++++.++.+.+.+
T Consensus 477 ~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~--~~~~-~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~ 552 (1034)
T 3ixz_A 477 AMGYRERFPKVCEIPFNSTNKFQLSIHTLEDP--RDPR-HVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAY 552 (1034)
T ss_pred hHHHHHhCcceEEeeecCCCceEEEEEEecCC--CCcc-EEEEEeCChHHHHHHhHHhhc-CCceecCCHHHHHHHHHHH
Confidence 666665555 89999999999988765431 0144 889999999999999998875 6778899999999999999
Q ss_pred HHHhhccccceeeeeEEeeccccchH-------HHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCC
Q 043517 540 RDIEANHHSLRCISFACKRVEQQNEE-------EIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILED 612 (956)
Q Consensus 540 ~~~~~~~~G~rvl~~A~k~~~~~~~~-------~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd 612 (956)
++++. +|+||+++|||.++..+.. ...+..|+|++|+|+++++||+|++++++|++|+ ++||+++|+|||
T Consensus 553 ~~~a~--~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~-~aGI~vvmiTGd 629 (1034)
T 3ixz_A 553 LSLGG--LGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCR-TAGIRVIMVTGD 629 (1034)
T ss_pred HHHHh--cCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHH-HcCCeEEEEeCC
Confidence 99999 9999999999998754321 1233468999999999999999999999999999 999999999999
Q ss_pred CHHHHHHHHHhcCCcccCCCCC---------------CCCCCcceeeechhhhcCCHHHHHhhhccce--EEEecChhhH
Q 043517 613 DINIARLIAINSGLILKPGAED---------------HSNGYDAAVIEASVFRSSSEETRSLMVDNVR--VMANASPLDK 675 (956)
Q Consensus 613 ~~~ta~~ia~~~Gi~~~~~~~~---------------~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~--v~ar~~p~~K 675 (956)
+..+|.++|+++|+ ..++... ........+++|.++..+.++++.+.+.... +|+|++|+||
T Consensus 630 ~~~tA~~ia~~lgi-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K 708 (1034)
T 3ixz_A 630 HPITAKAIAASVGI-ISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQK 708 (1034)
T ss_pred CHHHHHHHHHHcCC-CCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHH
Confidence 99999999999999 4332110 0112245689999999999999988887664 9999999999
Q ss_pred HHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHH
Q 043517 676 LLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQL 755 (956)
Q Consensus 676 ~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~ 755 (956)
.++++.+|+.|+.|+|+|||.||+|||++||+|||||.+|++.+|++||+|+.+++++++++++++||++|+|+++++.|
T Consensus 709 ~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~ 788 (1034)
T 3ixz_A 709 LVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAY 788 (1034)
T ss_pred HHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCC-CCCCcchHHHHHHH
Q 043517 756 HLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAAS-ASPLANKTVWRNII 832 (956)
Q Consensus 756 ~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~-~~~l~~~~~~~~i~ 832 (956)
.+++|+..++..+++.++..+.|++++|+||+|+++|.+|+++|++||+ ++|++ ||+++ +++++++.++..++
T Consensus 789 ~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~----~Pr~~~~~~l~~~~~~~~~~ 864 (1034)
T 3ixz_A 789 TLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHL----RPRNPKRDRLVNEPLAAYSY 864 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhC----CCCCCccccccCHHHHHHHH
Confidence 9999999999999988888899999999999999999999999999999 99999 99988 68899998876654
Q ss_pred H-HHHHHHHHHHHHHHhhhhh--------hccc-----c--------------------ccccchhHHHHHHHHHHHHHH
Q 043517 833 L-QVLYQVFVLSATQLKGNEL--------LQVQ-----A--------------------NKTDLKAIVFNSFVLCQVFVL 878 (956)
Q Consensus 833 ~-~~~~~~~~~~~~~~~~~~~--------~~~~-----~--------------------~~~~~~t~~f~~l~~~~~~~~ 878 (956)
+ .++++++..++.++..... ++.. . ....++|++|++++++|++++
T Consensus 865 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~ 944 (1034)
T 3ixz_A 865 FQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADV 944 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 3 3666655555444322110 0000 0 001268999999999999999
Q ss_pred HHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHH--HHHHhhccccCCChhhHHHHHHHHHHHHHHHHHHhhc
Q 043517 879 INAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVI--EMVTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCI 953 (956)
Q Consensus 879 ~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~i~k~~ 953 (956)
+++|+. +.++|+ .++++|++++++++++++++++++ |.++.+|++.|+++.+|+++++++++.++++|+.|++
T Consensus 945 ~~~r~~-~~s~~~-~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~ 1019 (1034)
T 3ixz_A 945 LIRKTR-RLSAFQ-QGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLG 1019 (1034)
T ss_pred HhhccC-CCcccc-cCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 356787 688999999999999888888765 4589999999999999999999999999999999986
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-123 Score=1172.64 Aligned_cols=848 Identities=21% Similarity=0.276 Sum_probs=720.3
Q ss_pred hCCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 043517 34 SGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLL 113 (956)
Q Consensus 34 ~~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~ 113 (956)
..+.+++++.|++++.+|||+ +|+++|+++||+|+++ +++++|+|+.+++||++|++++|+++++++++.
T Consensus 50 ~~~~~~~~~~l~t~~~~GLs~--~e~~~r~~~~G~N~l~--------~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~ 119 (1028)
T 2zxe_A 50 KLSLDELHNKYGTDLTRGLTN--ARAKEILARDGPNSLT--------PPPTTPEWIKFCRQLFGGFSILLWIGAILCFLA 119 (1028)
T ss_dssp SSCHHHHHHHHTCCSSSCBCH--HHHHHHHHHHCCSCCC--------CCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHhCcCccCCCCH--HHHHHHHHhcCCCCCC--------CCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 458999999999999999999 9999999999999999 677899999999999999999999999999876
Q ss_pred cccc--CC---CcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEE
Q 043517 114 GIKR--NG---FEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVV 188 (956)
Q Consensus 114 ~~~~--~~---~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV 188 (956)
+... .+ +...|+++++++++++++.+++.++++++++++++| +...+.+++|+|||++++|+++||||||+|
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L---~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV 196 (1028)
T 2zxe_A 120 YGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSF---KNMVPQQALVIRDGEKSTINAEFVVAGDLV 196 (1028)
T ss_dssp HHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHH---HTTSCSEEEEEETTEEEEEEGGGCCTTCEE
T ss_pred HHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhCCCeeEEEECCEEEEEEHHHCCcCCEE
Confidence 4311 01 112477788888888888899999999888888888 466788999999999999999999999999
Q ss_pred EeCCCCcccccEEEEeeCCceecccC----------C----------CCCeEeeccEEeeeeEEEEEEEecCcChHHHHH
Q 043517 189 CLQTGDQVPADGLFVHGKNLKLDDGD----------D----------KLPCIFTGAKVVGGECSMLVTSVGENTETSMLM 248 (956)
Q Consensus 189 ~l~~G~~vPaD~~ll~g~~l~vdes~----------~----------~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~ 248 (956)
.|++||+|||||+|++|+++.||||+ . +.|++|+||.|.+|.++++|++||.+|.+|+|+
T Consensus 197 ~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 276 (1028)
T 2zxe_A 197 EVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIA 276 (1028)
T ss_dssp EEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHH
T ss_pred EECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHH
Confidence 99999999999999999878999999 1 235799999999999999999999999999999
Q ss_pred HhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHH
Q 043517 249 KLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKF 328 (956)
Q Consensus 249 ~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (956)
+++..++ .+++|+|+.+++++.++..++++++++++++++ +.+ . ++.
T Consensus 277 ~~~~~~~------~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~---~~~------~-----------~~~------- 323 (1028)
T 2zxe_A 277 TLASGLE------VGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL---ILG------Y-----------SWL------- 323 (1028)
T ss_dssp HHHHHSC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTT------C-----------CHH-------
T ss_pred HhccCCC------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hcc------C-----------cHH-------
Confidence 9999888 889999999999999999999988888877742 221 1 222
Q ss_pred hhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEE
Q 043517 329 IRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANM 408 (956)
Q Consensus 329 ~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v 408 (956)
..+.+++++++++|||+ ||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|
T Consensus 324 ---------~~~~~~i~llv~~iP~~-Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v 393 (1028)
T 2zxe_A 324 ---------EAVIFLIGIIVANVPEG-LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTV 393 (1028)
T ss_dssp ---------HHHHHHHHHHHHHSCTT-HHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEE
T ss_pred ---------HHHHHHHHHHHHHcCch-HHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEE
Confidence 67788899999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCcccccCC----------CCHHHHHHHHHHHHhcCCCC---------------CCCCcHHHHHHHHHhhcCCCh
Q 043517 409 AELWIATDNSFIKS----------TSADVLDALREAIATTSYDE---------------AAVDDDDALLLWAKEFLDVDG 463 (956)
Q Consensus 409 ~~i~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~~---------------~~~p~e~Al~~~~~~~~~~~~ 463 (956)
.+++..+..+..+. ..+...+.+..++++||++. ..+|+|.||+++++ +.+.+.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~-~~~~~~ 472 (1028)
T 2zxe_A 394 AHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIE-LCCGSV 472 (1028)
T ss_dssp EEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHH-HHHSCH
T ss_pred EEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHH-HhCCCH
Confidence 99998764332110 01223345566778887532 13578999999998 655555
Q ss_pred hhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHH
Q 043517 464 DKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIR 540 (956)
Q Consensus 464 ~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~ 540 (956)
...+..++ ++||+|+||||+++++..+. .+++ +++|+|||||.++++|++... +|...+++++.++++.+.++
T Consensus 473 ~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~--~~~~-~~~~~KGA~e~il~~c~~~~~-~g~~~~l~~~~~~~~~~~~~ 548 (1028)
T 2zxe_A 473 QGMRDRNPKIVEIPFNSTNKYQLSIHENEKS--SESR-YLLVMKGAPERILDRCSTILL-NGAEEPLKEDMKEAFQNAYL 548 (1028)
T ss_dssp HHHHHHSCEEEEECCCTTTCEEEEEEECSCT--TTCC-EEEEEEECHHHHHTTEEEECB-TTBCCBCCHHHHHHHHHHHH
T ss_pred HHHHHhCceEEEeccCcccceEEEEEeccCC--CCCc-EEEEEeCCcHHHHHHhhhhhc-CCCcccCCHHHHHHHHHHHH
Confidence 44444444 78999999999999986420 0145 889999999999999998754 77788999999999999999
Q ss_pred HHhhccccceeeeeEEeeccccchHH-------HHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCC
Q 043517 541 DIEANHHSLRCISFACKRVEQQNEEE-------IIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDD 613 (956)
Q Consensus 541 ~~~~~~~G~rvl~~A~k~~~~~~~~~-------~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~ 613 (956)
++++ +|+||+++|||+++.+++.. ..+..|+|++|+|+++++||+||+++++|++|+ ++||+++|+|||+
T Consensus 549 ~~a~--~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~-~aGI~v~miTGD~ 625 (1028)
T 2zxe_A 549 ELGG--LGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCR-SAGIKVIMVTGDH 625 (1028)
T ss_dssp HHHH--TTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHH-HTTCEEEEECSSC
T ss_pred HHHh--cCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHH-HcCCEEEEECCCC
Confidence 9999 99999999999886532111 122347899999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhcCCcccCCCCC---------------CCCCCcceeeechhhhcCCHHHHHhhhccce--EEEecChhhHH
Q 043517 614 INIARLIAINSGLILKPGAED---------------HSNGYDAAVIEASVFRSSSEETRSLMVDNVR--VMANASPLDKL 676 (956)
Q Consensus 614 ~~ta~~ia~~~Gi~~~~~~~~---------------~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~--v~ar~~p~~K~ 676 (956)
..||.++|+++|| ...+... ...+....+++|.+++.+.++++.+++.++. +|+|++|+||.
T Consensus 626 ~~tA~~ia~~lgi-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~ 704 (1028)
T 2zxe_A 626 PITAKAIAKGVGI-ISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKL 704 (1028)
T ss_dssp HHHHHHHHHHHTS-SCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHH
T ss_pred HHHHHHHHHHcCC-CCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHH
Confidence 9999999999999 4332110 0001125789999999999999998888775 99999999999
Q ss_pred HHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHH
Q 043517 677 LMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLH 756 (956)
Q Consensus 677 ~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~ 756 (956)
++|+.+|+.|++|+|+|||.||+|||++||+|||||.+|++.+|++||+++.++++++|++++++||++|+|+++++.|.
T Consensus 705 ~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~ 784 (1028)
T 2zxe_A 705 IIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYT 784 (1028)
T ss_dssp HHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999977999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCCCC-CCcchHHHHH-HH
Q 043517 757 LTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAASAS-PLANKTVWRN-II 832 (956)
Q Consensus 757 l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~-~l~~~~~~~~-i~ 832 (956)
+++|+..++..++..++..+.|++++|++|+|++++.+|++++++|++ ++|++ +|+++++ +++++.++.. ++
T Consensus 785 l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~----~Pr~~~~~~l~~~~~~~~~~~ 860 (1028)
T 2zxe_A 785 LTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKR----QPRNPKTDKLVNERLISMAYG 860 (1028)
T ss_dssp HHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGS----CCCCTTTCCSSCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhcc----CCCCcccccccCHHHHHHHHH
Confidence 999999998888888888899999999999999999999999999999 89999 9988776 9999987766 34
Q ss_pred HHHHHHHHHHHHHHHhhhh---------------hhccc-c------c-----------cccchhHHHHHHHHHHHHHHH
Q 043517 833 LQVLYQVFVLSATQLKGNE---------------LLQVQ-A------N-----------KTDLKAIVFNSFVLCQVFVLI 879 (956)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~---------------~~~~~-~------~-----------~~~~~t~~f~~l~~~~~~~~~ 879 (956)
..+++++++.++.++.... ++... . . ...++|++|++++++|+++++
T Consensus 861 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~ 940 (1028)
T 2zxe_A 861 QIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLI 940 (1028)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 4567766655544432211 11000 0 0 025789999999999999999
Q ss_pred HHhhccccccccccCCCchhHHHHHHHHHHHHHHHHHH--HHHhhccccCCChhhHHHHHHHHHHHHHHHHHHhhc
Q 043517 880 NAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIE--MVTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCI 953 (956)
Q Consensus 880 ~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~i~k~~ 953 (956)
++|+. +.++|+ .+ ++|+++++++++++++++++++ .++.+|++.|+++.+|+++++++++.++++++.|++
T Consensus 941 ~~r~~-~~~~~~-~~-~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 1013 (1028)
T 2zxe_A 941 ICKTR-RNSIFQ-QG-MKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFI 1013 (1028)
T ss_dssp HTTCS-SSCHHH-HC-SCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHH
T ss_pred HHccC-Ccchhc-cC-CcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99984 346677 24 8999999999998888887775 478999999999999999999999999999999875
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-120 Score=1151.97 Aligned_cols=855 Identities=21% Similarity=0.307 Sum_probs=718.8
Q ss_pred hCCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 043517 34 SGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLL 113 (956)
Q Consensus 34 ~~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~ 113 (956)
..+++++++.|++|+.+|||+ +|+++|+++||+|+++ .++++++|+++++||++++++++++++++++++
T Consensus 7 ~~~~~~~~~~l~~~~~~GLs~--~e~~~r~~~~G~N~l~--------~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~ 76 (995)
T 3ar4_A 7 SKSTEECLAYFGVSETTGLTP--DQVKRHLEKYGHNELP--------AEEGKSLWELVIEQFEDLLVRILLLAACISFVL 76 (995)
T ss_dssp GSCHHHHHHHHTCCTTTCBCH--HHHHHHHHHHCCSSCC--------CCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHhCCCcccCCCH--HHHHHHHHhcCCCccC--------CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 358999999999999999999 9999999999999999 667889999999999999999999999999988
Q ss_pred ccccCC--CcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCE--EEEEEccccccCcEEE
Q 043517 114 GIKRNG--FEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGR--VRQIAVSEVVVGDVVC 189 (956)
Q Consensus 114 ~~~~~~--~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~--~~~I~~~~Lv~GDiV~ 189 (956)
+....+ ....|+++++++++++++.+++.++|+++++++++| +...+.+++|+|||+ .++|+++||||||+|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L---~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~ 153 (995)
T 3ar4_A 77 AWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEAL---KEYEPEMGKVYRADRKSVQRIKARDIVPGDIVE 153 (995)
T ss_dssp TTSCCSSGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH---GGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEE
T ss_pred HhccccccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHH---HccCCCeEEEEeCCCceEEEEEHHHCCCCCEEE
Confidence 764322 123688999998888888999999999999999998 567888999999987 6999999999999999
Q ss_pred eCCCCcccccEEEEe--eCCceecccC----------C-------------CCCeEeeccEEeeeeEEEEEEEecCcChH
Q 043517 190 LQTGDQVPADGLFVH--GKNLKLDDGD----------D-------------KLPCIFTGAKVVGGECSMLVTSVGENTET 244 (956)
Q Consensus 190 l~~G~~vPaD~~ll~--g~~l~vdes~----------~-------------~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~ 244 (956)
|++||+|||||+|++ +..+.||||+ . ++|++|+||.|.+|.++++|++||.+|.+
T Consensus 154 l~~Gd~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~ 233 (995)
T 3ar4_A 154 VAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEI 233 (995)
T ss_dssp EETTCBCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHH
T ss_pred ECCCCcccccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHH
Confidence 999999999999965 4567999999 1 13799999999999999999999999999
Q ss_pred HHHHHhhcccccccccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhh
Q 043517 245 SMLMKLLSKDDRINRQDYKESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEV 324 (956)
Q Consensus 245 g~i~~~~~~~~~~~~~~~~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (956)
||+++++.+++ .+++|+|+.+++++.++.++++++++++++++... +. +......|. ..+.
T Consensus 234 g~i~~~~~~~~------~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~-------~~~~--- 294 (995)
T 3ar4_A 234 GKIRDQMAATE------QDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGH--FN-DPVHGGSWI-------RGAI--- 294 (995)
T ss_dssp HHHHHHHHTCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGG--GG-SCSSSSCHH-------HHHH---
T ss_pred HHHHHHhhcCC------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hc-cccccchHH-------HHHH---
Confidence 99999999888 88999999999999999999888877766653211 11 000011121 1122
Q ss_pred hHHHhhccCcchhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCC
Q 043517 325 VTKFIRRQGATSHNRYVEMLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLD 404 (956)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~ 404 (956)
..+..++++++++|||+ ||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|
T Consensus 295 -------------~~~~~ai~l~v~aiP~~-Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n 360 (995)
T 3ar4_A 295 -------------YYFKIAVALAVAAIPEG-LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTN 360 (995)
T ss_dssp -------------HHHHHHHHHHHHHSCTT-HHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCC
T ss_pred -------------HHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccC
Confidence 55678899999999999 9999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEecCcc----------------cccCC-----------CCHHHHHHHHHHHHhcCCCC------------CCC
Q 043517 405 HANMAELWIATDN----------------SFIKS-----------TSADVLDALREAIATTSYDE------------AAV 445 (956)
Q Consensus 405 ~~~v~~i~~~~~~----------------~~~~~-----------~~~~~~~~l~~~~~~~~~~~------------~~~ 445 (956)
+|+|.+++..+.. +.+.. ........+..++++||++. ..+
T Consensus 361 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~ 440 (995)
T 3ar4_A 361 QMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGE 440 (995)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESC
T ss_pred ceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCC
Confidence 9999999875311 11100 00122344566778888754 146
Q ss_pred CcHHHHHHHHHhhcCC-Ch--hh-------------hccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCc
Q 043517 446 DDDDALLLWAKEFLDV-DG--DK-------------MKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGS 506 (956)
Q Consensus 446 p~e~Al~~~~~~~~~~-~~--~~-------------~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa 506 (956)
|+|.|++.+++ +.|. +. .. .+..++ ++||+|+||||+|+++..++.....+ ..+|+|||
T Consensus 441 p~E~Al~~~a~-~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~-~~~~~KGa 518 (995)
T 3ar4_A 441 ATETALTTLVE-KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVG-NKMFVKGA 518 (995)
T ss_dssp HHHHHHHHHHH-HHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCC-CEEEEEEC
T ss_pred ccHHHHHHHHH-HcCCccccccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccc-eEEEEcCC
Confidence 89999999998 7665 21 10 122233 88999999999999986542000014 67999999
Q ss_pred hHHHHHhchhccccCCccccCCHHHHHHHHHHHHHH--hhccccceeeeeEEeeccccch------HHHHhhhccCcEEE
Q 043517 507 PEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDI--EANHHSLRCISFACKRVEQQNE------EEIIELTECGLTWL 578 (956)
Q Consensus 507 ~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~G~rvl~~A~k~~~~~~~------~~~~~~~e~~l~~l 578 (956)
||.|+++|++... ++...+++++.++++.+.+++| ++ +|+||+++|||+++..+. ...++.+|+|++|+
T Consensus 519 ~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~--~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~l 595 (995)
T 3ar4_A 519 PEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGR--DTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFV 595 (995)
T ss_dssp HHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHHHST--TCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEE
T ss_pred HHHHHHhcchhhc-CCCcccCCHHHHHHHHHHHHHHHhhh--ccceEEEEEEEecCccccccccccchhhhhhccCcEEE
Confidence 9999999998766 4466789999999999999999 99 999999999998854321 12256678999999
Q ss_pred EEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHH
Q 043517 579 GLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRS 658 (956)
Q Consensus 579 Gli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 658 (956)
|+++++||+|++++++|+.|+ ++||+++|+|||+..+|.++|+++|| ...+.+ -...+++|.+++.++++++.
T Consensus 596 G~~~i~D~lr~~~~~~I~~l~-~~Gi~v~miTGD~~~ta~~ia~~lgi-~~~~~~-----i~~~~~~g~~~~~l~~~~~~ 668 (995)
T 3ar4_A 596 GVVGMLDPPRKEVMGSIQLCR-DAGIRVIMITGDNKGTAIAICRRIGI-FGENEE-----VADRAYTGREFDDLPLAEQR 668 (995)
T ss_dssp EEEEEECCBCTTHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHTS-SCTTCC-----CTTTEEEHHHHHTSCHHHHH
T ss_pred EEEeecCCCchhHHHHHHHHH-HcCCEEEEECCCCHHHHHHHHHHcCc-CCCCCc-----ccceEEEchhhhhCCHHHHH
Confidence 999999999999999999999 99999999999999999999999999 432110 02468999999999999999
Q ss_pred hhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHH
Q 043517 659 LMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAAN 738 (956)
Q Consensus 659 ~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~ 738 (956)
+.+.+..+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++||+||||| +|+++++++||+++.++++++++++
T Consensus 669 ~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~ 747 (995)
T 3ar4_A 669 EACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAA 747 (995)
T ss_dssp HHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHH
T ss_pred HHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCC
Q 043517 739 LKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAA 816 (956)
Q Consensus 739 i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~ 816 (956)
+++||++|+|+++++.|.+++|+..++..+++.++..+.|++|+|++|+|+++|.+|+++++++++ ++|++ +|+
T Consensus 748 i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~----~P~ 823 (995)
T 3ar4_A 748 VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDR----PPR 823 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGS----CCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhhccCCCChhHHhC----CCC
Confidence 999999999999999999999999988888888888888999999999999999999999999998 99999 999
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHh-hhhh--------hccc-------------------cccccchhHHHH
Q 043517 817 ASASPLANKTVWRNIILQVLYQVFVLSATQLK-GNEL--------LQVQ-------------------ANKTDLKAIVFN 868 (956)
Q Consensus 817 ~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~--------~~~~-------------------~~~~~~~t~~f~ 868 (956)
.++++++++.++..++..+++++++.+..+++ .... .... .....++|++|+
T Consensus 824 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~ 903 (995)
T 3ar4_A 824 SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALS 903 (995)
T ss_dssp CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHH
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhccccccccccccccccccccccchhhhhHHHH
Confidence 99999999998888888888877665433221 1100 0000 001246899999
Q ss_pred HHHHHHHHHHHHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHH--HHHHhhccccCCChhhHHHHHHHHHHHHHH
Q 043517 869 SFVLCQVFVLINAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVI--EMVTVVTHGTRMDLKDWCVCIGIAVMTLPT 946 (956)
Q Consensus 869 ~l~~~~~~~~~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~ 946 (956)
+++++|+++.+++|+.. .++|+ .++|+|++++++++++++++++++ ++++.+|++.|+++.+|+++++++++.+++
T Consensus 904 ~lv~~~~~~~~~~r~~~-~~~~~-~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~ 981 (995)
T 3ar4_A 904 VLVTIEMCNALNSLSEN-QSLMR-MPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGL 981 (995)
T ss_dssp HHHHHHHHHHHTTSCSS-CCTTT-SCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHhhccc-cchhc-cCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999744 44565 478899999999888877777655 458899999999999999999999999999
Q ss_pred HHHHhhc
Q 043517 947 GLVAKCI 953 (956)
Q Consensus 947 ~~i~k~~ 953 (956)
++++|++
T Consensus 982 ~e~~k~~ 988 (995)
T 3ar4_A 982 DEILKFI 988 (995)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999976
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-115 Score=1077.74 Aligned_cols=788 Identities=18% Similarity=0.213 Sum_probs=649.1
Q ss_pred CCHHH-HHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHh
Q 043517 35 GRIQA-IAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLL 113 (956)
Q Consensus 35 ~~~~~-~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~ 113 (956)
++.+. +.+.|+++..+|||+ +|+++|+++||+|+++ .+++++|..+++||++|+++++++++++++++
T Consensus 70 ~~~~~~~~~~l~t~~~~GLs~--~ea~~r~~~~G~N~l~---------~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~ 138 (920)
T 1mhs_A 70 GGGRVVPEDMLQTDTRVGLTS--EEVVQRRRKYGLNQMK---------EEKENHFLKFLGFFVGPIQFVMEGAAVLAAGL 138 (920)
T ss_dssp HHHSCCSSTTTTTCCCCCCCS--HHHHHHHHHTSSSSCC---------CCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTC
T ss_pred CccchhHHHHhCCCcCCCCCH--HHHHHHHHhcCCCccC---------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44433 456799998899999 9999999999999999 45688999999999999999999999999888
Q ss_pred ccccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCC
Q 043517 114 GIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTG 193 (956)
Q Consensus 114 ~~~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G 193 (956)
+. |.++++++++++++.+++.++++++++++++| +...+.+++|+|||++++|+++||||||+|.|++|
T Consensus 139 g~--------~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L---~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~G 207 (920)
T 1mhs_A 139 ED--------WVDFGVICGLLLLNAVVGFVQEFQAGSIVDEL---KKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEG 207 (920)
T ss_dssp SC--------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---TTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTT
T ss_pred Hh--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCC
Confidence 75 88988888888888999999999999999998 46678899999999999999999999999999999
Q ss_pred CcccccEEEEeeCC-ceecccC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCC
Q 043517 194 DQVPADGLFVHGKN-LKLDDGD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDY 262 (956)
Q Consensus 194 ~~vPaD~~ll~g~~-l~vdes~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~ 262 (956)
|+|||||+|++|++ +.||||+ ..++.+|+||.|.+|.+.++|++||.+|.+|++.+++...+ .
T Consensus 208 d~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~------~ 281 (920)
T 1mhs_A 208 TIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAAS------G 281 (920)
T ss_dssp CBCSSEEEEEEESSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCC------C
T ss_pred CccccceEEEecCceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcc------c
Confidence 99999999999996 9999999 45799999999999999999999999999999999998887 7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHH
Q 043517 263 KESKLQISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVE 342 (956)
Q Consensus 263 ~~s~l~~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (956)
+++|+++.++++..++.++++++++++++. +++. .. ++. ..+.+
T Consensus 282 ~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~----~~~~-----~~-----------~~~----------------~~l~~ 325 (920)
T 1mhs_A 282 GSGHFTEVLNGIGTILLILVIFTLLIVWVS----SFYR-----SN-----------PIV----------------QILEF 325 (920)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHT----TTTT-----TC-----------CHH----------------HHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhc-----CC-----------cHH----------------HHHHH
Confidence 899999999999999888777766554443 1211 01 233 77889
Q ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCC
Q 043517 343 MLSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKS 422 (956)
Q Consensus 343 ~i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~ 422 (956)
++++++++|||+ ||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.. .
T Consensus 326 av~llV~aiP~a-Lp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~-~--- 400 (920)
T 1mhs_A 326 TLAITIIGVPVG-LPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV-D--- 400 (920)
T ss_dssp HHHHHHHHSCCC-HHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC-C---
T ss_pred HHHHHHHhCchh-HHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCC-C---
Confidence 999999999999 99999999999999999999999999999999999999999999999999999998765421 1
Q ss_pred CCHHHHHHHHHHHHhcCCCCCC--CCcHHHHHHHHHhhcCCChhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCc
Q 043517 423 TSADVLDALREAIATTSYDEAA--VDDDDALLLWAKEFLDVDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDN 497 (956)
Q Consensus 423 ~~~~~~~~l~~~~~~~~~~~~~--~p~e~Al~~~~~~~~~~~~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~ 497 (956)
++ ++ ..++++|++.... ||+|.|+++++. +.+.... ....++ .+||+|.+|+|+++++..+ ++
T Consensus 401 --~~--~l-l~~a~l~~~~~~~~~~P~e~Al~~~~~-~~~~~~~-~~~~~~~~~~~pF~s~~k~ms~iv~~~~-----g~ 468 (920)
T 1mhs_A 401 --PE--DL-MLTACLAASRKKKGIDAIDKAFLKSLK-YYPRAKS-VLSKYKVLQFHPFDPVSKKVVAVVESPQ-----GE 468 (920)
T ss_dssp --CT--HH-HHHHHHSCCCSSCSCCSHHHHHHHHHH-HSSSCCG-GGSCCCEEEEEEEETTTTEEEEEECCSS-----SS
T ss_pred --HH--HH-HHHHHHhcCCcccCCChHHHHHHHHHH-hcccchh-hccccceeEEeeccCCCCeEEEEEEeCC-----Cc
Confidence 11 22 2345566654444 799999999987 5543221 122233 7899999999999997644 34
Q ss_pred eEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEE
Q 043517 498 SVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTW 577 (956)
Q Consensus 498 ~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~ 577 (956)
.++++|||||.++++|+. ..+++++.++.+.+.+++++. +|+||+++|++.. |++++|
T Consensus 469 -~~~~~KGape~il~~c~~-------~~~~~~~~~~~~~~~~~~~a~--~G~RvL~vA~~~~------------e~~l~~ 526 (920)
T 1mhs_A 469 -RITCVKGAPLFVLKTVEE-------DHPIPEEVDQAYKNKVAEFAT--RGFRSLGVARKRG------------EGSWEI 526 (920)
T ss_dssp -CEEEEEECHHHHHHHCCC-------SSCCCHHHHHHHHHHHHHHHT--SSCCCCEECCCSS------------SCSCCC
T ss_pred -EEEEEeCCHHHHHHhccc-------cCCCCHHHHHHHHHHHHHHHh--CCCEEEEEEEecc------------ccccEE
Confidence 668899999999999963 235778888999999999999 9999999999732 458999
Q ss_pred EEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHH
Q 043517 578 LGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETR 657 (956)
Q Consensus 578 lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 657 (956)
+|+++++||+||+++++|++|+ ++||+++|+|||++.||.++|+++|| .... .+....+++|. +.++++++
T Consensus 527 lGli~i~Dp~R~ea~~aI~~l~-~aGI~v~MiTGD~~~TA~aIA~~lGI--~~~~----~~~~~~~~~g~--~~~~~~el 597 (920)
T 1mhs_A 527 LGIMPCMDPPRHDTYKTVCEAK-TLGLSIKMLTGDAVGIARETSRQLGL--GTNI----YNAERLGLGGG--GDMPGSEV 597 (920)
T ss_dssp CBBCCCCCCCCHHHHHHHHHHH-HHTCEEEEEESSCHHHHHHHHHHHTS--SCSC----CCSSSSSSCBC--CCGGGGGG
T ss_pred EEEEEEeccccccHHHHHHHHh-hcCceEEEEcCCCHHHHHHHHHHcCC--Cccc----cCccceeecCc--ccCCHHHH
Confidence 9999999999999999999999 99999999999999999999999999 4210 01133456666 56677788
Q ss_pred HhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHH
Q 043517 658 SLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 658 ~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~ 737 (956)
.+.+.++.+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++||+||||| +|++++|++||+++.++++++|++
T Consensus 598 ~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ 676 (920)
T 1mhs_A 598 YDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIID 676 (920)
T ss_dssp GTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHH
T ss_pred HHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHH
Confidence 8888899999999999999999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCccccccCcccccCCC
Q 043517 738 NLKWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQLPAHATAAA 817 (956)
Q Consensus 738 ~i~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~p~ly~p~~ 817 (956)
++++||++|+|+++++.|.++.|+....+..+...+. ..|+++.|++|+|++++. |++++++++++. .+ +|++
T Consensus 677 ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~-~~~l~~~~il~~~l~~d~-~~lal~~e~~~~-~~----~P~~ 749 (920)
T 1mhs_A 677 ALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAIL-NRSLNIELVVFIAIFADV-ATLAIAYDNAPY-SQ----TPVK 749 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-SCCCCHHHHHHHHHHHTT-HHHHCCCCCSGG-GG----SCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHH-HhhhhcccCccc-cc----CCCC
Confidence 9999999999999999999999997644433333333 345899999999999996 899999998722 13 5666
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhh---hccccccccchhHHHHHHHHHHHHHHHHHhhccccccccccC
Q 043517 818 SASPLANKTVWRNIILQVLYQVFVLSATQLKGNEL---LQVQANKTDLKAIVFNSFVLCQVFVLINAREIEALNIFEGKG 894 (956)
Q Consensus 818 ~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~t~~f~~l~~~~~~~~~~~~~~~~~~~f~~~~ 894 (956)
++.+- ++..++..+++.++..++.++..... .+........+|++|++++++|+++++++|+.+ ++|+ +
T Consensus 750 ~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~--~~~~--~ 821 (920)
T 1mhs_A 750 WNLPK----LWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRANG--PFWS--S 821 (920)
T ss_dssp CCSSS----CSSCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSS--SCSC--C
T ss_pred chHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHHhccch--hhhc--C
Confidence 54422 22222333444444333322211110 000012346899999999999999999999743 3555 4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhhccccCCChhhHHHHHHHHHHHHHHHHHHhhc
Q 043517 895 LHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCI 953 (956)
Q Consensus 895 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~i~k~~ 953 (956)
+ .|++++.++++..++++++.+ ++ +|.+.|++|.+|+++++++++.+++.++.|++
T Consensus 822 ~-~~~~~~~~~~~~~~~~~~~~~-~~-~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 877 (920)
T 1mhs_A 822 I-PSWQLSGAIFLVDILATCFTI-WG-WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYI 877 (920)
T ss_dssp S-CTHHHHHHHHHHHHHHHHHHS-SS-STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHC
T ss_pred c-hHHHHHHHHHHHHHHHHHHHH-hh-hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 788887777777666666553 33 88899999999999999999999999999975
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-114 Score=1062.74 Aligned_cols=799 Identities=17% Similarity=0.202 Sum_probs=624.7
Q ss_pred CCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 043517 35 GRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLLLG 114 (956)
Q Consensus 35 ~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~~~ 114 (956)
.+.+++++.|+++ .+|||+ +|+++|+++||+|+++ .+++++|+.+++||++|++++++++++++++++
T Consensus 17 ~~~~~~~~~l~~~-~~GLs~--~e~~~r~~~~G~N~l~---------~~~~~~~~~~l~~~~~p~~~il~~aaiis~~l~ 84 (885)
T 3b8c_A 17 IPIEEVFQQLKCS-REGLTT--QEGEDRIQIFGPNKLE---------EKKESKLLKFLGFMWNPLSWVMEMAAIMAIALA 84 (885)
T ss_dssp SSTTCCTTTSSSC-SSCSTH--HHHHHHSSSCCSCCTT---------TTCCCTTSSTTSCCCGGGSSHHHHHHHGGGGSS
T ss_pred CCHHHHHHHhCCC-CCCCCH--HHHHHHHHhcCCCccC---------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999998 679999 9999999999999999 444788899999999999999999999998886
Q ss_pred cccCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCCC
Q 043517 115 IKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGD 194 (956)
Q Consensus 115 ~~~~~~~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~ 194 (956)
.. .+....|.+++.++++++++.+++.++++++++++++| +...+.+++|+|||++++|+++||||||+|.|++||
T Consensus 85 ~~-~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L---~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd 160 (885)
T 3b8c_A 85 NG-DGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAAL---MAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGD 160 (885)
T ss_dssp CC-TTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHT---TTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSC
T ss_pred hc-ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCC
Confidence 42 22334589998888777778888999999999999988 466788999999999999999999999999999999
Q ss_pred cccccEEEEeeCCceecccC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCC
Q 043517 195 QVPADGLFVHGKNLKLDDGD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKE 264 (956)
Q Consensus 195 ~vPaD~~ll~g~~l~vdes~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~ 264 (956)
+|||||+|++|+++.||||+ ..++.+|+||.|.+|.++++|++||.+|.+||+.+++.. . .++
T Consensus 161 ~IPaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~------~~~ 233 (885)
T 3b8c_A 161 IIPADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-T------NQV 233 (885)
T ss_dssp CCSSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-C------SCC
T ss_pred EEeeceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-c------ccc
Confidence 99999999999998999999 457899999999999999999999999999999988776 4 578
Q ss_pred ChhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHH
Q 043517 265 SKLQISVDRMGSRMEK-IWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEM 343 (956)
Q Consensus 265 s~l~~~~~~~~~~~~~-~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (956)
+|+|+.++++++++.. ++++++++++++ |+.. ..+|. ..+.++
T Consensus 234 ~~lq~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~---------------------------~~~~~~ 277 (885)
T 3b8c_A 234 GHFQKVLTAIGNFCICSIAIGMVIEIIVM----YPIQ-----RRKYR---------------------------DGIDNL 277 (885)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHHHHSTTT----TTTT-----CSCST---------------------------THHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHc-----cCcHH---------------------------HHHHHH
Confidence 9999999999887433 322233222222 1111 12232 678899
Q ss_pred HHHHHHHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCCC
Q 043517 344 LSILVFVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKST 423 (956)
Q Consensus 344 i~ll~~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~ 423 (956)
+++++++|||+ ||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+.. .+.. ..
T Consensus 278 v~llv~aiP~a-Lp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~-~~ 353 (885)
T 3b8c_A 278 LVLLIGGIPIA-MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCK-GV 353 (885)
T ss_dssp HHHTTTTCCSS-TTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCS-ST
T ss_pred HHHHHHHhhhH-HHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCC-CC
Confidence 99999999999 99999999999999999999999999999999999999999999999999999743311 0100 01
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEE
Q 043517 424 SADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVH 500 (956)
Q Consensus 424 ~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~ 500 (956)
++ .+++.. +++|+.....||+|.|+++++. + ....+..++ .+||+|.+|+|+++++..+ ++ .+
T Consensus 354 ~~--~~ll~~-aa~~~~~~~~~p~~~Al~~~~~-~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~-----g~-~~ 419 (885)
T 3b8c_A 354 EK--DQVLLF-AAMASRVENQDAIDAAMVGMLA-D----PKEARAGIREVHFLPFNPVDKRTALTYIDGS-----GN-WH 419 (885)
T ss_dssp TH--HHHHHH-HHHHCCSSSCCSHHHHHHHTTC-C----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSS-----SC-BC
T ss_pred CH--HHHHHH-HHHHhCCCCCCchHHHHHHHhh-c----hhhHhhcCceeecccCCcccceEEEEEEecC-----Cc-EE
Confidence 12 233433 3455554456799999998875 2 111122222 7899999999999887543 34 66
Q ss_pred EEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEE
Q 043517 501 IHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGL 580 (956)
Q Consensus 501 ~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGl 580 (956)
+++|||||.++++|+. +++.++++.+.+++++. +|+||+++|+++++..+ .+..|++++|+|+
T Consensus 420 ~~~KGa~e~il~~c~~-----------~~~~~~~~~~~~~~~a~--~G~rvl~vA~~~~~~~~----~~~~e~~l~~lGl 482 (885)
T 3b8c_A 420 RVSKGAPEQILELAKA-----------SNDLSKKVLSIIDKYAE--RGLRSLAVARQVVPEKT----KESPGAPWEFVGL 482 (885)
T ss_dssp BCCCCSGGGTSSSSCC-----------CSTTTTTHHHHHHHHTT--TTCEEEEECCBCCCSSS----SSCCCCCCCCCEE
T ss_pred EEEeCCHHHHHHhccC-----------chhhHHHHHHHHHHHHh--CCCeEEEEEEecccccc----ccccccCcEEEEE
Confidence 8899999999999962 12234567788899999 99999999999876532 2456789999999
Q ss_pred eeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhc-CCHHHHHh
Q 043517 581 VRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRS-SSEETRSL 659 (956)
Q Consensus 581 i~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~~ 659 (956)
++++||+|||++++|++|+ ++||+++|+|||+..||.++|+++|| ..+. ....+++|.+++. ++++++++
T Consensus 483 i~i~Dp~R~~a~~aI~~l~-~aGI~v~MiTGD~~~tA~~iA~~lGi--~~~~------~~~~~l~g~~~~~~~~~~~l~~ 553 (885)
T 3b8c_A 483 LPLFDPPRHDSAETIRRAL-NLGVNVKMITGDQLAIGKETGRRLGM--GTNM------YPSSALLGTHKDANLASIPVEE 553 (885)
T ss_dssp EEECCCCCHHHHHHHHHHH-HTTCCCEEEESSCHHHHTHHHHTTTC--TTCC------STTSSCCBGGGGTTSCCSCHHH
T ss_pred EEeecccchhHHHHHHHHH-HcCCcEEEEcCCChHHHHHHHHHhCC--cccc------CCcceeeccccccccchhHHHH
Confidence 9999999999999999999 99999999999999999999999999 4311 0234677888876 67777888
Q ss_pred hhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 660 MVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 660 ~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
.+.++.+|+|++|+||.++|+.+|++|++|+|+|||.||+|||++||+||||| +|++.+|++||+++.++++++|++++
T Consensus 554 ~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai 632 (885)
T 3b8c_A 554 LIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAV 632 (885)
T ss_dssp HHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHH
T ss_pred HHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCccccccCcccccCCCCC
Q 043517 740 KWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVSLRVQLPAHATAAASA 819 (956)
Q Consensus 740 ~~gR~~~~~i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~~~~~~p~ly~p~~~~ 819 (956)
++||++|+|+++++.|.+++|+..++.. +.....++.|++|+|++|+|++++..+ +++++++. + +|++|+
T Consensus 633 ~~gR~~~~ni~~~i~~~l~~n~~~~~~~-~~~~~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~----~----~~~~p~ 702 (885)
T 3b8c_A 633 LTSRAIFQRMKNYTIYAVSITIRIVFGF-MLIALIWEFDFSAFMVLIIAILNDGTI-MTISKDRV----K----PSPTPD 702 (885)
T ss_dssp HTHHHHHHHHHHHHHHHHHHTTTTTSTT-HHHHSSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCC----C----CSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHccCcCcCHHHHHHHHHHHHHHH-Hhhccccc----C----cccCCc
Confidence 9999999999999999999998644333 333335567999999999999999875 78887775 1 223333
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHhhhh--h----hcccc---ccccchhH-HHHHHHHHHHHHHHHHhhcccccc
Q 043517 820 SPLANKTVWRNIILQVLYQVFVLSATQLKGNE--L----LQVQA---NKTDLKAI-VFNSFVLCQVFVLINAREIEALNI 889 (956)
Q Consensus 820 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~----~~~~~---~~~~~~t~-~f~~l~~~~~~~~~~~~~~~~~~~ 889 (956)
...+ +.++...+..+++.++..++++++... + ++.+. .....+|. .|..++++|+ +++++|+.+ .++
T Consensus 703 ~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~-~~~ 779 (885)
T 3b8c_A 703 SWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRS-WSF 779 (885)
T ss_dssp STTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCT-TTS
T ss_pred chhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccCC-CCc
Confidence 3333 333333444555555555544433221 1 11100 01234444 4445666675 788888743 233
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccCCChhhHHHHHHHHHHHHHHHHHHhhc
Q 043517 890 FEGKGLHQNPWFLVIVGFIFILDIAVIEMVTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCI 953 (956)
Q Consensus 890 f~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~i~k~~ 953 (956)
|+ .. .|++++.+++..++++++.++....++++.|++|.+|+++++++++.+++.++.|++
T Consensus 780 ~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 840 (885)
T 3b8c_A 780 VE--RP-GALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFA 840 (885)
T ss_dssp TT--ST-TTTTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHH
T ss_pred cc--Cc-cHHHHHHHHHHHHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 22 444444433333344443333223345689999999999999999999999999975
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-78 Score=734.19 Aligned_cols=502 Identities=19% Similarity=0.246 Sum_probs=435.7
Q ss_pred cccchhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEE-CCEEEEEEccccccCcEEEeCCCCcccc
Q 043517 121 EQGILDGAMVF-VVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMR-DGRVRQIAVSEVVVGDVVCLQTGDQVPA 198 (956)
Q Consensus 121 ~~~~~~~~~i~-~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~R-dg~~~~I~~~~Lv~GDiV~l~~G~~vPa 198 (956)
...|+++.+++ +++++..+++...+.+..+++++| ....+.+++|+| ||++++|++++|+|||+|.|++||+|||
T Consensus 184 ~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L---~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPa 260 (736)
T 3rfu_A 184 VAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRAL---LKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPV 260 (736)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHH---TCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCS
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccc
Confidence 34588877555 444444566655555556667777 567788999988 9999999999999999999999999999
Q ss_pred cEEEEeeCCceecccC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhH
Q 043517 199 DGLFVHGKNLKLDDGD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQ 268 (956)
Q Consensus 199 D~~ll~g~~l~vdes~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~ 268 (956)
||+|++|++ .||||+ ..++.+|+||.+.+|.++++|++||.+|.+|||.+++.+++ .+++|+|
T Consensus 261 Dg~vl~G~~-~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~------~~k~~~q 333 (736)
T 3rfu_A 261 DGEVQEGRS-FVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQ------RSRAPIQ 333 (736)
T ss_dssp CEEECSSCE-EEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHH------SSCCCCC
T ss_pred cEEEEECce-EeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhh------hcCCHHH
Confidence 999999998 999999 56899999999999999999999999999999999999988 8899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHH
Q 043517 269 ISVDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILV 348 (956)
Q Consensus 269 ~~~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~ 348 (956)
+.+++++.++++++++++++++++|+. .+. .+.|. ..+.+++++++
T Consensus 334 ~~~d~~a~~~v~~vl~ia~~~~~~w~~---~~~----~~~~~---------------------------~~l~~ai~vlv 379 (736)
T 3rfu_A 334 RLADTVSGWFVPAVILVAVLSFIVWAL---LGP----QPALS---------------------------YGLIAAVSVLI 379 (736)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH---HCS----SSSTT---------------------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---hCC----CchHH---------------------------HHHHHHHHhHH
Confidence 999999999999999999999988632 221 11232 77899999999
Q ss_pred HHcCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHH
Q 043517 349 FVSRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVL 428 (956)
Q Consensus 349 ~~iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~ 428 (956)
++|||+ ||+++|+++..++.+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+. + ..
T Consensus 380 iacPca-L~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~-------~--~~ 449 (736)
T 3rfu_A 380 IACPCA-LGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDF-------V--ED 449 (736)
T ss_dssp HHCCST-HHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSS-------C--HH
T ss_pred HhhhhH-HHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCC-------C--HH
Confidence 999999 9999999999999999999999999999999999999999999999999999999984332 1 13
Q ss_pred HHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchH
Q 043517 429 DALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPE 508 (956)
Q Consensus 429 ~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e 508 (956)
+.+..+.+++..+.| |++.|++++++ +.+..... ..+|++.+++. +.....+ .+ +.+|+++
T Consensus 450 ~~l~~aa~le~~s~h--Pla~Aiv~~a~-~~~~~~~~------~~~f~~~~g~g-v~~~~~g-----~~----~~~G~~~ 510 (736)
T 3rfu_A 450 NALALAAALEHQSEH--PLANAIVHAAK-EKGLSLGS------VEAFEAPTGKG-VVGQVDG-----HH----VAIGNAR 510 (736)
T ss_dssp HHHHHHHHHHHSSCC--HHHHHHHHHHH-TTCCCCCC------CSCCCCCTTTE-EEECSSS-----SC----EEEESHH
T ss_pred HHHHHHHHHhhcCCC--hHHHHHHHHHH-hcCCCccC------cccccccCCce-EEEEECC-----EE----EEEcCHH
Confidence 456666677766655 99999999998 66665433 55788877764 4433322 32 3569999
Q ss_pred HHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCc
Q 043517 509 IILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYA 588 (956)
Q Consensus 509 ~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr 588 (956)
.+.+.+.. .+.+.+..++++. +|+|++++|+ |.+++|+++++|++|
T Consensus 511 ~~~~~~~~---------------~~~~~~~~~~~~~--~G~~vl~va~-----------------d~~~~G~i~i~D~i~ 556 (736)
T 3rfu_A 511 LMQEHGGD---------------NAPLFEKADELRG--KGASVMFMAV-----------------DGKTVALLVVEDPIK 556 (736)
T ss_dssp HHHHHCCC---------------CHHHHHHHHHHHH--TTCEEEEEEE-----------------TTEEEEEEEEECCBC
T ss_pred HHHHcCCC---------------hhHHHHHHHHHHh--cCCeEEEEEE-----------------CCEEEEEEEeeccch
Confidence 88654321 1245667888999 9999999998 789999999999999
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEE
Q 043517 589 SEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMA 668 (956)
Q Consensus 589 ~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~a 668 (956)
++++++|++|+ ++|++++|+|||+..+|..+|+++|+ +. +++
T Consensus 557 ~~~~~aI~~L~-~~Gi~v~mlTGd~~~~a~~ia~~lgi--~~-----------------------------------v~a 598 (736)
T 3rfu_A 557 SSTPETILELQ-QSGIEIVMLTGDSKRTAEAVAGTLGI--KK-----------------------------------VVA 598 (736)
T ss_dssp SSHHHHHHHHH-HHTCEEEEECSSCHHHHHHHHHHHTC--CC-----------------------------------EEC
T ss_pred hhHHHHHHHHH-HCCCeEEEECCCCHHHHHHHHHHcCC--CE-----------------------------------EEE
Confidence 99999999999 99999999999999999999999999 65 999
Q ss_pred ecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHH
Q 043517 669 NASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNN 748 (956)
Q Consensus 669 r~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~ 748 (956)
+++|++|.++++.+|++|+.|+|+|||.||+|||++||+||||| +|++.++++||+++.+++++++++++++||++++|
T Consensus 599 ~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~ 677 (736)
T 3rfu_A 599 EIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSN 677 (736)
T ss_dssp SCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 043517 749 IRKFIQLHLTVNAAAFAVNL 768 (956)
Q Consensus 749 i~~~~~~~l~~ni~~~~~~~ 768 (956)
+++++.|++.||++.+.+++
T Consensus 678 i~qnl~~a~~yN~~~iplAa 697 (736)
T 3rfu_A 678 IRQNLFFAFIYNVLGVPLAA 697 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887764
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-75 Score=705.32 Aligned_cols=496 Identities=19% Similarity=0.244 Sum_probs=417.6
Q ss_pred chhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCCCcccccEEE
Q 043517 124 ILDGAMVFVVIS-SVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLF 202 (956)
Q Consensus 124 ~~~~~~i~~~~l-~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~l 202 (956)
|++..+++++++ +...++...+.+.+++++++ ....+.+++|+|||++++|+++||+|||+|.|++||+|||||+|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l---~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~v 171 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKL---VGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVV 171 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHH---HHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEE
Confidence 666555443333 22333333333333445555 46678999999999999999999999999999999999999999
Q ss_pred EeeCCceecccC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHH
Q 043517 203 VHGKNLKLDDGD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVD 272 (956)
Q Consensus 203 l~g~~l~vdes~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~ 272 (956)
++|++ .||||+ ..++.+|+||.+.+|.++++|++||.+|.+||+.+++.+++ .+++|+|+.++
T Consensus 172 l~G~~-~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~------~~k~~~~~~~d 244 (645)
T 3j08_A 172 VEGES-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM------GSKPPIQRLAD 244 (645)
T ss_dssp EECCE-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCC------CCCCSHHHHHH
T ss_pred EECcE-EEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhh------ccCChHHHHHH
Confidence 99998 999999 56899999999999999999999999999999999999988 89999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcC
Q 043517 273 RMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSR 352 (956)
Q Consensus 273 ~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP 352 (956)
+++.++.+++++++++++++|+ +.. +.+|. ..+..++++++++||
T Consensus 245 ~~~~~~~~~vl~~a~~~~~~~~---~~~-----~~~~~---------------------------~~~~~~i~vlvia~P 289 (645)
T 3j08_A 245 KVVAYFIPTVLLVAISAFIYWY---FIA-----HAPLL---------------------------FAFTTLIAVLVVACP 289 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSS---CCC-----SCSCC---------------------------CTTTTTHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---Hhc-----CCcHH---------------------------HHHHHHHHHHHHHhh
Confidence 9999999999999888877641 211 11222 456778999999999
Q ss_pred CCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHH
Q 043517 353 DGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALR 432 (956)
Q Consensus 353 ~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~ 432 (956)
|+ ||+++|+++..++.+++|+|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.. ..+.+.
T Consensus 290 ~a-L~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~---------~~~~l~ 359 (645)
T 3j08_A 290 CA-FGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD---------ERELLR 359 (645)
T ss_dssp TT-HHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC---------HHHHHH
T ss_pred hH-HHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC---------HHHHHH
Confidence 99 99999999999999999999999999999999999999999999999999999999987532 134555
Q ss_pred HHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHH
Q 043517 433 EAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILS 512 (956)
Q Consensus 433 ~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~ 512 (956)
.+.+++..+.| |++.|++++++ +.|.+... ..+|++..++. +.. . .+.+|+++.+.+
T Consensus 360 ~aa~~e~~s~h--Pla~Aiv~~a~-~~g~~~~~------~~~~~~~~g~g-~~~---~----------~v~~g~~~~~~~ 416 (645)
T 3j08_A 360 LAAIAERRSEH--PIAEAIVKKAL-EHGIELGE------PEKVEVIAGEG-VVA---D----------GILVGNKRLMED 416 (645)
T ss_dssp HHHHHHTTCCS--HHHHHHHHHHH-HTTCCCCS------CCCCEEETTTE-EEE---T----------TEEEECHHHHHH
T ss_pred HHHHHhhcCCC--hhHHHHHHHHH-hcCCCcCC------ccceEEecCCc-eEE---E----------EEEECCHHHHHh
Confidence 56666665554 99999999998 77665432 12333322221 111 1 135699887754
Q ss_pred hchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHH
Q 043517 513 MCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVK 592 (956)
Q Consensus 513 ~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~ 592 (956)
... +. ++.+.+..++++. +|+|++++|+ |++++|+++++|++||+++
T Consensus 417 ~~~----------~~----~~~~~~~~~~~~~--~g~~~l~va~-----------------~~~~~G~i~~~D~l~~~~~ 463 (645)
T 3j08_A 417 FGV----------AV----SNEVELALEKLER--EAKTAVIVAR-----------------NGRVEGIIAVSDTLKESAK 463 (645)
T ss_dssp TTC----------CC----CHHHHHHHHHHHT--TTCCCEEEEE-----------------TTEEEEEEEEECCCTTTHH
T ss_pred cCC----------Cc----cHHHHHHHHHHHh--cCCeEEEEEE-----------------CCEEEEEEEecCCchhHHH
Confidence 321 11 2356777888999 9999999998 7899999999999999999
Q ss_pred HHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecCh
Q 043517 593 QAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASP 672 (956)
Q Consensus 593 ~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p 672 (956)
++|++|+ ++|++++|+|||+..+|..+|+++|+ +. ++++++|
T Consensus 464 ~~i~~L~-~~Gi~v~~~TGd~~~~a~~ia~~lgi--~~-----------------------------------~~~~~~P 505 (645)
T 3j08_A 464 PAVQELK-RMGIKVGMITGDNWRSAEAISRELNL--DL-----------------------------------VIAEVLP 505 (645)
T ss_dssp HHHHHHH-HTTCEEEEECSSCHHHHHHHHHHHTC--SE-----------------------------------EECSCCT
T ss_pred HHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHcCC--CE-----------------------------------EEEeCCH
Confidence 9999999 99999999999999999999999999 65 8999999
Q ss_pred hhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHH
Q 043517 673 LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKF 752 (956)
Q Consensus 673 ~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~ 752 (956)
++|.++++.++++ +.|+|+|||.||+|||+.||+||||| +|++.++++||+++.+++++++++++++||++++|++++
T Consensus 506 ~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~n 583 (645)
T 3j08_A 506 HQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQN 583 (645)
T ss_dssp TCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 89999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 043517 753 IQLHLTVNAAAFAVNLVA 770 (956)
Q Consensus 753 ~~~~l~~ni~~~~~~~~~ 770 (956)
+.|++.||++.+.+++.+
T Consensus 584 l~~a~~~N~~~i~la~~~ 601 (645)
T 3j08_A 584 IFWALIYNVILIPAAAGL 601 (645)
T ss_dssp HHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999977776544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-75 Score=711.39 Aligned_cols=508 Identities=19% Similarity=0.235 Sum_probs=423.6
Q ss_pred chhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCCCcccccEEE
Q 043517 124 ILDGAMVFVVIS-SVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLF 202 (956)
Q Consensus 124 ~~~~~~i~~~~l-~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~l 202 (956)
|++..+++++++ +...++...+.+.+++++++ ....+.+++|+|||++++|+++||+|||+|.|++||+|||||+|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l---~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~v 249 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKL---VGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVV 249 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHH---HHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEE
Confidence 566555443333 22333333333333445555 46678899999999999999999999999999999999999999
Q ss_pred EeeCCceecccC----------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHHHH
Q 043517 203 VHGKNLKLDDGD----------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQISVD 272 (956)
Q Consensus 203 l~g~~l~vdes~----------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~~~ 272 (956)
++|++ .||||+ ..++.+|+||.+.+|.++++|++||.+|.+||+.+++.+++ .+++|+|+.++
T Consensus 250 l~G~~-~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~------~~k~~~~~~~d 322 (723)
T 3j09_A 250 VEGES-YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM------GSKPPIQRLAD 322 (723)
T ss_dssp EECCE-EEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSC------CSCCHHHHHHH
T ss_pred EECCe-EEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhh------ccCChHHHHHH
Confidence 99998 999999 56899999999999999999999999999999999999988 89999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHHcC
Q 043517 273 RMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFVSR 352 (956)
Q Consensus 273 ~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~iP 352 (956)
+++.++++++++++++++++| +... +.+|. ..+..++++++++||
T Consensus 323 ~~~~~~~~~vl~~a~~~~~~~----~~~~----~~~~~---------------------------~~~~~~i~vlvia~P 367 (723)
T 3j09_A 323 KVVAYFIPTVLLVAISAFIYW----YFIA----HAPLL---------------------------FAFTTLIAVLVVACP 367 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHTTS----CSST----TCTTC---------------------------CSHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHhc----CCcHH---------------------------HHHHHHHHHHHhhhh
Confidence 999999999999988887764 2211 11222 567889999999999
Q ss_pred CCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHH
Q 043517 353 DGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALR 432 (956)
Q Consensus 353 ~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~ 432 (956)
|+ ||+++|+++..++.+++++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.. ..+++.
T Consensus 368 ~a-L~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~---------~~~~l~ 437 (723)
T 3j09_A 368 CA-FGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD---------ERELLR 437 (723)
T ss_dssp TT-HHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC---------HHHHHH
T ss_pred HH-HHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC---------HHHHHH
Confidence 99 99999999999999999999999999999999999999999999999999999999987432 134555
Q ss_pred HHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHH
Q 043517 433 EAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILS 512 (956)
Q Consensus 433 ~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~ 512 (956)
.+.+++..+.| |++.|+++++. +.|..... ..+|++..++. +.. . .+.+|+++.+.+
T Consensus 438 ~aa~~e~~s~h--P~~~Ai~~~a~-~~~~~~~~------~~~~~~~~g~g-~~~---~----------~~~~g~~~~~~~ 494 (723)
T 3j09_A 438 LAAIAERRSEH--PIAEAIVKKAL-EHGIELGE------PEKVEVIAGEG-VVA---D----------GILVGNKRLMED 494 (723)
T ss_dssp HHHHHHTTCCS--HHHHHHHHHHH-HTTCCCCS------CCCCEEETTTE-EEE---T----------TEEEECHHHHHH
T ss_pred HHHHHhccCCC--chhHHHHHHHH-hcCCCcCC------ccceEEecCCc-eEE---E----------EEEECCHHHHHh
Confidence 56666665555 99999999998 66665432 22333322221 111 1 135699887754
Q ss_pred hchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHH
Q 043517 513 MCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVK 592 (956)
Q Consensus 513 ~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~ 592 (956)
... +. ++.+.+..++++. +|+|++++|+ |++++|+++++|++||+++
T Consensus 495 ~~~----------~~----~~~~~~~~~~~~~--~g~~~~~va~-----------------~~~~~G~i~i~D~~~~~~~ 541 (723)
T 3j09_A 495 FGV----------AV----SNEVELALEKLER--EAKTAVIVAR-----------------NGRVEGIIAVSDTLKESAK 541 (723)
T ss_dssp TTC----------CC----CHHHHHHHHHHHT--TTCEEEEEEE-----------------TTEEEEEEEEECCSCTTHH
T ss_pred cCC----------Cc----cHHHHHHHHHHHh--cCCeEEEEEE-----------------CCEEEEEEeecCCcchhHH
Confidence 321 11 2356777888999 9999999998 7899999999999999999
Q ss_pred HHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecCh
Q 043517 593 QAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASP 672 (956)
Q Consensus 593 ~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p 672 (956)
++|++|+ ++|++++|+|||+..+|..+|+++|+ +. ++++++|
T Consensus 542 ~~i~~l~-~~Gi~v~~~TGd~~~~a~~ia~~lgi--~~-----------------------------------~~~~~~P 583 (723)
T 3j09_A 542 PAVQELK-RMGIKVGMITGDNWRSAEAISRELNL--DL-----------------------------------VIAEVLP 583 (723)
T ss_dssp HHHHHHH-HTTCEEEEECSSCHHHHHHHHHHHTC--SE-----------------------------------EECSCCT
T ss_pred HHHHHHH-HCCCEEEEECCCCHHHHHHHHHHcCC--cE-----------------------------------EEccCCH
Confidence 9999999 99999999999999999999999999 65 8999999
Q ss_pred hhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHH
Q 043517 673 LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKF 752 (956)
Q Consensus 673 ~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~ 752 (956)
++|.++++.+|++ +.|+|+|||.||+|||+.||+||||| +|++.++++||+++.+++++++++++++||++++|++++
T Consensus 584 ~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~n 661 (723)
T 3j09_A 584 HQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQN 661 (723)
T ss_dssp TCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 89999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCchHH
Q 043517 753 IQLHLTVNAAAFAVNLVAAIFCGEIPLEPF 782 (956)
Q Consensus 753 ~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~ 782 (956)
+.|++.||++.+.+++.+........++|+
T Consensus 662 l~~a~~~n~~~i~~a~~~~~~~~g~~l~p~ 691 (723)
T 3j09_A 662 IFWALIYNVILIPAAAGLLYPIFGVVFRPE 691 (723)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCCCCSCCHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhccccccCHH
Confidence 999999999987776554333223344444
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-32 Score=293.16 Aligned_cols=260 Identities=20% Similarity=0.227 Sum_probs=203.4
Q ss_pred HHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCC
Q 043517 366 YASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAV 445 (956)
Q Consensus 366 ~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 445 (956)
.++.+++|+||++|+++++|.++++++||||||||||+|++.+.++. +. .+++..+.+++..+.|
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~-----------~~~l~~~~~~e~~s~h-- 68 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD-----------SLSLAYAASVEALSSH-- 68 (263)
Confidence 46788999999999999999999999999999999999999999875 11 1334444555554444
Q ss_pred CcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccc
Q 043517 446 DDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQ 525 (956)
Q Consensus 446 p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~ 525 (956)
|...|+.++++ ..|.+.... -.|....+. ++-....+ . .+..|+++
T Consensus 69 p~a~ai~~~~~-~~g~~~~~~------~~~~~~~G~-g~~~~~~~-----~----~~~~G~~~----------------- 114 (263)
T 2yj3_A 69 PIAKAIVKYAK-EQGVKILEV------KDFKEISGI-GVRGKISD-----K----IIEVKKAE----------------- 114 (263)
Confidence 89999999887 555432211 011111000 00000000 0 00011111
Q ss_pred cCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCE
Q 043517 526 TLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIK 605 (956)
Q Consensus 526 ~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~ 605 (956)
+|.+ +.+++ +..+.|.+.+.|+++|++.++++.|+ +.|++
T Consensus 115 ---------------------~~~~-~~~~~-----------------~~~~~~~~~~~~~~~~g~~~~l~~L~-~~g~~ 154 (263)
T 2yj3_A 115 ---------------------NNND-IAVYI-----------------NGEPIASFNISDVPRPNLKDYLEKLK-NEGLK 154 (263)
Confidence 2333 34443 45789999999999999999999999 99999
Q ss_pred EEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhc
Q 043517 606 IKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQK 685 (956)
Q Consensus 606 v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~ 685 (956)
++|+|||+..++..+++++|+ +. +|+.+.|+.|...++.++..
T Consensus 155 ~~i~T~~~~~~~~~~~~~~gl--~~-----------------------------------~f~~~~p~~k~~~~~~l~~~ 197 (263)
T 2yj3_A 155 IIILSGDKEDKVKELSKELNI--QE-----------------------------------YYSNLSPEDKVRIIEKLKQN 197 (263)
Confidence 999999999999999999999 55 78888899999999999999
Q ss_pred CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHH
Q 043517 686 GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKF 752 (956)
Q Consensus 686 g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~ 752 (956)
++.|+|+|||.||++|++.||+|+++| ++++.+++.||+++.++++..+.++++.+|+++++|++|
T Consensus 198 ~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 198 GNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999999999999 888999999999998889999999999999999999985
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=254.00 Aligned_cols=280 Identities=21% Similarity=0.268 Sum_probs=212.9
Q ss_pred HHHhhcccCCcccccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCC
Q 043517 366 YASKKLPCFRATARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAV 445 (956)
Q Consensus 366 ~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 445 (956)
-+.++++|+|+++|+++++|++++++++|||||||||.+.+.+.+++..+. . ..+++..+.+++..+.|
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~-------~~~~l~~~~~~e~~s~h-- 76 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D-------ERELLRLAAIAERRSEH-- 76 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C-------HHHHHHHHHHHTTTCCS--
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C-------HHHHHHHHHHHhhcCCC--
Confidence 367899999999999999999999999999999999999999999887654 1 12455556666655544
Q ss_pred CcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccc
Q 043517 446 DDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQ 525 (956)
Q Consensus 446 p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~ 525 (956)
|++.|+.++++ +.|++..... ++....+. ++.. . .+.+|+++.+.+.+.
T Consensus 77 p~~~a~~~~~~-~~g~~~~~~~------~~~~~~G~-~~~~---~----------~~~~g~~~~~~~~~~---------- 125 (287)
T 3a1c_A 77 PIAEAIVKKAL-EHGIELGEPE------KVEVIAGE-GVVA---D----------GILVGNKRLMEDFGV---------- 125 (287)
T ss_dssp HHHHHHHHHHH-HTTCCCCCCS------CEEEETTT-EEEE---T----------TEEEECHHHHHHTTC----------
T ss_pred HHHHHHHHHHH-hcCCCccccc------cceeecCC-CeEE---E----------EEEECCHHHHHhcCC----------
Confidence 99999999998 7776532110 11111111 1110 1 124577665433211
Q ss_pred cCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCE
Q 043517 526 TLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIK 605 (956)
Q Consensus 526 ~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~ 605 (956)
+++ +.+.+..+.+.. +|.+++++++ +..+.+.+...++++|++.++++.|+ +.|++
T Consensus 126 ~~~----~~~~~~~~~~~~--~g~~~i~~~~-----------------d~~~~~~~~~~~~~~~g~~~~l~~L~-~~g~~ 181 (287)
T 3a1c_A 126 AVS----NEVELALEKLER--EAKTAVIVAR-----------------NGRVEGIIAVSDTLKESAKPAVQELK-RMGIK 181 (287)
T ss_dssp CCC----HHHHHHHHHHHH--TTCEEEEEEE-----------------TTEEEEEEEEECCBCTTHHHHHHHHH-HTTCE
T ss_pred Ccc----HHHHHHHHHHHh--CCCeEEEEEE-----------------CCEEEEEEEeccccchhHHHHHHHHH-HCCCe
Confidence 111 234455677778 9999999998 67899999999999999999999999 99999
Q ss_pred EEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhc
Q 043517 606 IKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQK 685 (956)
Q Consensus 606 v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~ 685 (956)
+.++||++...+..+++++|+ .. +|....|+.|...++.++..
T Consensus 182 ~~i~T~~~~~~~~~~l~~~gl--~~-----------------------------------~f~~i~~~~K~~~~~~l~~~ 224 (287)
T 3a1c_A 182 VGMITGDNWRSAEAISRELNL--DL-----------------------------------VIAEVLPHQKSEEVKKLQAK 224 (287)
T ss_dssp EEEECSSCHHHHHHHHHHHTC--SE-----------------------------------EECSCCTTCHHHHHHHHTTT
T ss_pred EEEEeCCCHHHHHHHHHHhCC--ce-----------------------------------eeeecChHHHHHHHHHHhcC
Confidence 999999999999999999999 54 67777899999999999888
Q ss_pred CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHH
Q 043517 686 GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIR 750 (956)
Q Consensus 686 g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~ 750 (956)
+.++|+||+.||++|.+.||++++++ ++.+..+..||+++.++++..+.++++++|+++++|+
T Consensus 225 -~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 225 -EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp -CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred -CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999998 7777777889999988899999999999999999875
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=236.24 Aligned_cols=276 Identities=20% Similarity=0.202 Sum_probs=204.2
Q ss_pred cccccccccccceeEEeeCccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHh
Q 043517 378 ARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKE 457 (956)
Q Consensus 378 vk~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~ 457 (956)
+|+++++|.+++++.||||++||||.|+++|.+++..+.. ..+++..+.++.....+ |...++.+.+.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~---------~~~~~~~~~~~~~~s~~--~~~~a~~~~~~- 68 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS---------EDELLQIAASLEARSEH--PIAAAIVEEAE- 68 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC---------HHHHHHHHHHHHTTCCS--HHHHHHHHHHH-
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC---------HHHHHHHHHHhhccCCC--HHHHHHHHHHH-
Confidence 5889999999999999999999999999999999887651 12344444455544444 68999999888
Q ss_pred hcCCChhhhcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHH
Q 043517 458 FLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNN 537 (956)
Q Consensus 458 ~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~ 537 (956)
..|....... .+..-...+ ....+ . + . .+..|+++.+....... + +
T Consensus 69 ~~g~~~~~~~----~~~~~~g~~-~~~~~--~------~--~-~~~~~~~~~~~~~~~~~----------~--------~ 114 (280)
T 3skx_A 69 KRGFGLTEVE----EFRAIPGKG-VEGIV--N------G--R-RYMVVSPGYIRELGIKT----------D--------E 114 (280)
T ss_dssp HTTCCCCCCE----EEEEETTTE-EEEEE--T------T--E-EEEEECHHHHHHTTCCC----------C--------T
T ss_pred hcCCCCCCcc----ceeecCCCE-EEEEE--C------C--E-EEEEecHHHHHHcCCCc----------h--------H
Confidence 7766532211 110001111 11111 1 1 1 22447777765543211 1 1
Q ss_pred HHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHH
Q 043517 538 FIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIA 617 (956)
Q Consensus 538 ~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta 617 (956)
....+.. ++.+++.+++ +..++|.+.+.++++|++.++++.|+ +.|+++.++||++...+
T Consensus 115 ~~~~~~~--~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~l~~l~-~~g~~~~i~T~~~~~~~ 174 (280)
T 3skx_A 115 SVEKLKQ--QGKTVVFILK-----------------NGEVSGVIALADRIRPESREAISKLK-AIGIKCMMLTGDNRFVA 174 (280)
T ss_dssp THHHHHT--TTCEEEEEEE-----------------TTEEEEEEEEEEEECTTHHHHHHHHH-HTTCEEEEECSSCHHHH
T ss_pred HHHHHHh--CCCeEEEEEE-----------------CCEEEEEEEecCCCCHhHHHHHHHHH-HCCCEEEEEeCCCHHHH
Confidence 2344556 8888888876 67899999999999999999999999 99999999999999999
Q ss_pred HHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCcc
Q 043517 618 RLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTR 697 (956)
Q Consensus 618 ~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~N 697 (956)
..+++++|+ .. .|..+.|.+|...++.+.+.. .++|+||+.|
T Consensus 175 ~~~~~~~gl--~~-----------------------------------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~n 216 (280)
T 3skx_A 175 KWVAEELGL--DD-----------------------------------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVN 216 (280)
T ss_dssp HHHHHHHTC--SE-----------------------------------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTT
T ss_pred HHHHHHcCC--hh-----------------------------------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCch
Confidence 999999999 54 788889999999999998876 5799999999
Q ss_pred CHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 043517 698 DAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNNIRKFIQLHLT 758 (956)
Q Consensus 698 D~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~ 758 (956)
|++|++.||+|++|| ++.+..++.||+++..++++++.++++.+|++++++++++.|++.
T Consensus 217 Di~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 217 DAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp THHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred hHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999 899999999999999999999999999999999999999998764
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-20 Score=173.33 Aligned_cols=99 Identities=28% Similarity=0.441 Sum_probs=91.6
Q ss_pred HHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC----------CCCCeEe
Q 043517 152 NELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD----------DKLPCIF 221 (956)
Q Consensus 152 ~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~----------~~~~~l~ 221 (956)
+++| ....+..++|+|||++++|++++|+|||+|.|++||+|||||++++|+. .||||+ ..++.+|
T Consensus 3 l~~L---~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~~g~~v~ 78 (113)
T 2hc8_A 3 IKKL---VGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDEVF 78 (113)
T ss_dssp HHHH---HHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCEEC
T ss_pred HHHH---hcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEECCCCEEE
Confidence 4455 4668899999999999999999999999999999999999999999996 999999 5689999
Q ss_pred eccEEeeeeEEEEEEEecCcChHHHHHHhhccc
Q 043517 222 TGAKVVGGECSMLVTSVGENTETSMLMKLLSKD 254 (956)
Q Consensus 222 ~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 254 (956)
+||.+.+|.+.++|++||.+|.+|+|.+++..+
T Consensus 79 aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 79 GATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp TTCEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred eCCEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 999999999999999999999999999988754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.3e-20 Score=172.67 Aligned_cols=106 Identities=21% Similarity=0.310 Sum_probs=93.6
Q ss_pred HHHHHHHHHHhHhhhhhcCCcEEEEECCE------EEEEEccccccCcEEEeCCCCcccccEEEEeeCCceecccC----
Q 043517 145 RFVKNWINELLVSKRTSRRAAVKVMRDGR------VRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKLDDGD---- 214 (956)
Q Consensus 145 ~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~------~~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~g~~l~vdes~---- 214 (956)
+++..+++++| ....+..++|+|+|+ ++.|++++|+|||+|.|++||+|||||+|++|++ .||||+
T Consensus 2 ~~ka~~~l~~L---~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGE 77 (124)
T 2kij_A 2 SFTMSEALAKL---ISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGE 77 (124)
T ss_dssp ----CCHHHHH---HHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCC
T ss_pred hHHHHHHHHHH---hccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCC
Confidence 45666777777 567899999999764 7899999999999999999999999999999999 999999
Q ss_pred ------CCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhccc
Q 043517 215 ------DKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKD 254 (956)
Q Consensus 215 ------~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 254 (956)
..++.+|+||.+.+|.+.++|++||.+|.+|+|++++..+
T Consensus 78 s~pv~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 78 AMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp SSCEECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred CccEEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 4589999999999999999999999999999999998754
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.9e-19 Score=176.95 Aligned_cols=144 Identities=16% Similarity=0.217 Sum_probs=112.2
Q ss_pred HHHHHHHHhcC--CCCCCCCcHHHHHHHHHhhcCCChhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEE
Q 043517 429 DALREAIATTS--YDEAAVDDDDALLLWAKEFLDVDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHW 503 (956)
Q Consensus 429 ~~l~~~~~~~~--~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~ 503 (956)
+++..| ++|+ .....+|+|.||++++. ..+ ....+..|+ .+||+|+||||+++++..+ ++ +++++
T Consensus 17 ~vl~~a-~L~s~~~~~~~n~~d~Ail~~~~-~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~-----g~-~~l~~ 86 (170)
T 3gwi_A 17 RVLHSA-WLNSHYQTGLKNLLDTAVLEGTD-EES--ARSLASRWQKIDEIPFDFERRRMSVVVAENT-----EH-HQLVC 86 (170)
T ss_dssp HHHHHH-HHHHHHCCSCCCHHHHHHHHTSC-HHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSS-----SE-EEEEE
T ss_pred HHHHHH-HHcCCCCCCCCChHHHHHHHHHH-hcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCC-----CC-EEEEE
Confidence 334433 3444 33456799999998875 322 122333444 8999999999999998654 44 78999
Q ss_pred eCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeee
Q 043517 504 RGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRL 583 (956)
Q Consensus 504 KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~ 583 (956)
|||||.|+++|+.+.. +|...|++++.++.+.+.+++|+. +|+|||++|||.++..+.. .....|+||+|+|+++|
T Consensus 87 KGApE~IL~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~la~--~GlRvLavA~k~~~~~~~~-~~~~~E~~L~f~G~~g~ 162 (170)
T 3gwi_A 87 KGALQEILNVCSQVRH-NGEIVPLDDIMLRKIKRVTDTLNR--QGLRVVAVATKYLPAREGD-YQRADESDLILEGYIAF 162 (170)
T ss_dssp EECHHHHHTTEEEEEE-TTEEEECCHHHHHHHHHHHHHHHH--TTCEEEEEEEEEEECCSSC-CCGGGSCSEEEEEEEEE
T ss_pred cCCcHHHHHHhHHHhc-CCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEEEEECCCCccc-cCccccCCcEEEehhcc
Confidence 9999999999998765 788899999999999999999999 9999999999998765422 12346999999999999
Q ss_pred ccc
Q 043517 584 KSA 586 (956)
Q Consensus 584 ~d~ 586 (956)
-|.
T Consensus 163 ~~~ 165 (170)
T 3gwi_A 163 LDH 165 (170)
T ss_dssp EC-
T ss_pred ccc
Confidence 885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.77 E-value=9.8e-21 Score=207.94 Aligned_cols=145 Identities=12% Similarity=0.073 Sum_probs=112.6
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhh--
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMV-- 661 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~-- 661 (956)
.+++||+++++++.|+ ++|++++|+|||+..++.++|+++|+ ... ...+.. ..+. .+++.+...+
T Consensus 139 ~i~l~~g~~e~i~~l~-~~gi~v~ivSgg~~~~i~~i~~~~g~--~~~--------~~~i~~-n~l~-~~~~~~~~~~~~ 205 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQ-QHGIPVFIFSAGIGDVLEEVIRQAGV--YHS--------NVKVVS-NFMD-FDENGVLKGFKG 205 (297)
T ss_dssp CCCBCBTHHHHHHHHH-HTTCCEEEEEEEEHHHHHHHHHHTTC--CCT--------TEEEEE-ECEE-ECTTSBEEEECS
T ss_pred CCCCCCcHHHHHHHHH-HcCCeEEEEeCCcHHHHHHHHHHcCC--Ccc--------cceEEe-eeEE-EcccceeEeccc
Confidence 4799999999999999 99999999999999999999999999 331 111111 1110 0000000000
Q ss_pred ccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhh---hCCccEEeCC------CChHHHHhcCCeeeccCCh
Q 043517 662 DNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLK---EADVGVSIGE------RSAQFARDCSDIVILDENF 732 (956)
Q Consensus 662 ~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~---~AdvGIamg~------~~~~~ak~~Ad~vl~~~~~ 732 (956)
..+..+++..|.+|...+..+++.++.|+|+|||+||+||++ .||+|||||- ++++.+++++|+|+.+|++
T Consensus 206 ~~i~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~ 285 (297)
T 4fe3_A 206 ELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEES 285 (297)
T ss_dssp SCCCTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCB
T ss_pred cccchhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCC
Confidence 112356777888999999999999999999999999999954 9999999993 6788899999999999999
Q ss_pred hHHHHHHHH
Q 043517 733 TTIAANLKW 741 (956)
Q Consensus 733 ~~i~~~i~~ 741 (956)
..++.+|.+
T Consensus 286 ~~v~~~il~ 294 (297)
T 4fe3_A 286 LEVVNSILQ 294 (297)
T ss_dssp CHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 999998754
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.7e-13 Score=139.53 Aligned_cols=139 Identities=14% Similarity=0.156 Sum_probs=113.5
Q ss_pred EEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHH
Q 043517 576 TWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEE 655 (956)
Q Consensus 576 ~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 655 (956)
..++.+.++|.. +++.|+ +.|+++.++||++...+..+++++|+ +.
T Consensus 42 ~~~~~~~~~~~~------~l~~L~-~~g~~~~i~T~~~~~~~~~~~~~lgl--~~------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLI-ASGVTTAIISGRKTAIVERRAKSLGI--EH------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHH-HTTCEEEEECSSCCHHHHHHHHHHTC--SE-------------------------
T ss_pred cEeeeeccccHH------HHHHHH-HCCCEEEEEECcChHHHHHHHHHcCC--HH-------------------------
Confidence 344555554433 999999 99999999999999999999999999 54
Q ss_pred HHHhhhccceEEEecChhhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCC
Q 043517 656 TRSLMVDNVRVMANASPLDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDEN 731 (956)
Q Consensus 656 ~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~ 731 (956)
+|... ..|.+.++.+.++ .+.++|+||+.||++|++.||++++++ ++.+.+++.||+++.+++
T Consensus 88 ----------~f~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~ 154 (189)
T 3mn1_A 88 ----------LFQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQG 154 (189)
T ss_dssp ----------EECSC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCT
T ss_pred ----------HhcCc--CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCC
Confidence 44433 5676777666654 478999999999999999999999999 899999999999998764
Q ss_pred ----hhHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 043517 732 ----FTTIAANLKWGRCVCNNIRKFIQLHLTVNA 761 (956)
Q Consensus 732 ----~~~i~~~i~~gR~~~~~i~~~~~~~l~~ni 761 (956)
+..+.+.+..+|..++++++++.|.+.+|-
T Consensus 155 ~~G~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 188 (189)
T 3mn1_A 155 GEGAAREFCELILSAQGNLEAAHSVYLEGHHHHH 188 (189)
T ss_dssp TTTHHHHHHHHHHHHTTCHHHHHHTTSTTC----
T ss_pred CCcHHHHHHHHHHHccCcHHHHHHHHhccccccC
Confidence 566778888999999999999999988873
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.4e-11 Score=124.19 Aligned_cols=132 Identities=15% Similarity=0.153 Sum_probs=107.4
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.+++.++|++|+ +.|++++++||++...+..+++++|+ +. +
T Consensus 36 ~~~~~~~~l~~L~-~~G~~~~i~Tg~~~~~~~~~~~~lgl--~~-----------------------------------~ 77 (180)
T 1k1e_A 36 FHVRDGLGIKMLM-DADIQVAVLSGRDSPILRRRIADLGI--KL-----------------------------------F 77 (180)
T ss_dssp EEHHHHHHHHHHH-HTTCEEEEEESCCCHHHHHHHHHHTC--CE-----------------------------------E
T ss_pred eccchHHHHHHHH-HCCCeEEEEeCCCcHHHHHHHHHcCC--ce-----------------------------------e
Confidence 4567789999999 99999999999999999999999999 53 3
Q ss_pred EEecChhhHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHH----HH
Q 043517 667 MANASPLDKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIA----AN 738 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~----~~ 738 (956)
|... ..|...++.+.++ | +.++++||+.||++|++.|+++++|+ ++.+.+++.||+++.+++..++. +.
T Consensus 78 ~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~ 154 (180)
T 1k1e_A 78 FLGK--LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDM 154 (180)
T ss_dssp EESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHH
T ss_pred ecCC--CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHH
Confidence 4333 3466665554433 4 78999999999999999999999999 88999999999999988776666 33
Q ss_pred HHHhhhHHHHHHHHHHHHHHH
Q 043517 739 LKWGRCVCNNIRKFIQLHLTV 759 (956)
Q Consensus 739 i~~gR~~~~~i~~~~~~~l~~ 759 (956)
+...|..+++++.++.|..+-
T Consensus 155 ~l~~~~~~~~~~~~~~~~~~~ 175 (180)
T 1k1e_A 155 ILQAQGKSSVFDTAQGFLKSV 175 (180)
T ss_dssp HHHHTTCTHHHHCHHHHHHHG
T ss_pred HHHhcCchhhhhhccchhhhh
Confidence 445777788888888887653
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=130.05 Aligned_cols=151 Identities=15% Similarity=0.117 Sum_probs=107.6
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceee--echhh-hc---------
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVI--EASVF-RS--------- 651 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i--~g~~~-~~--------- 651 (956)
..++.+++.++|++|+ +.|++++++|||+...+..+++++|+ +.. . ...+++.+. +|..+ ..
T Consensus 20 ~~~i~~~~~~~l~~l~-~~g~~~~i~TGr~~~~~~~~~~~l~~--~~~--~-I~~NGa~i~~~~~~~i~~~~~l~~~~~i 93 (227)
T 1l6r_A 20 DRLISTKAIESIRSAE-KKGLTVSLLSGNVIPVVYALKIFLGI--NGP--V-FGENGGIMFDNDGSIKKFFSNEGTNKFL 93 (227)
T ss_dssp TSCBCHHHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHHHTC--CSC--E-EEGGGTEEECTTSCEEESSCSHHHHHHH
T ss_pred CCcCCHHHHHHHHHHH-HCCCEEEEECCCCcHHHHHHHHHhCC--CCe--E-EEeCCcEEEeCCCCEEEEeccHHHHHHH
Confidence 3467899999999999 99999999999999999999999998 420 0 000011111 11111 00
Q ss_pred ----------------------------CCHHHHHhhhc--cceEE-----EecCh--hhHHHHHHHHHhc----CCeEE
Q 043517 652 ----------------------------SSEETRSLMVD--NVRVM-----ANASP--LDKLLMVQCLKQK----GEVVA 690 (956)
Q Consensus 652 ----------------------------~~~~~~~~~~~--~~~v~-----ar~~p--~~K~~iv~~lq~~----g~~v~ 690 (956)
...+++.++.. .+.+. .+..| ..|...++.+.++ .+.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~ 173 (227)
T 1l6r_A 94 EEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEIL 173 (227)
T ss_dssp HHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEE
Confidence 01111111111 22222 22334 5788888887764 35799
Q ss_pred EEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 691 VTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 691 ~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
++||+.||.+|++.|++|+||+ ++.+.+++.||+++.+++.+++.+++++
T Consensus 174 ~iGD~~nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 174 VIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp EECCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred EECCcHHhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 9999999999999999999999 8999999999999999999999998864
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.25 E-value=5.7e-12 Score=140.43 Aligned_cols=156 Identities=10% Similarity=0.031 Sum_probs=109.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+++|++.+.++.|+ +.|+++.++||++...+..+++++|+ ..-..... ......++|......
T Consensus 178 ~~~pg~~~~l~~L~-~~g~~~~ivS~~~~~~~~~~~~~lgl--~~~~~~~l-~~~d~~~tg~~~~~~------------- 240 (335)
T 3n28_A 178 PLMPELPELVATLH-AFGWKVAIASGGFTYFSDYLKEQLSL--DYAQSNTL-EIVSGKLTGQVLGEV------------- 240 (335)
T ss_dssp CCCTTHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHHHHTC--SEEEEEEE-EEETTEEEEEEESCC-------------
T ss_pred CcCcCHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHHHcCC--CeEEeeee-EeeCCeeeeeecccc-------------
Confidence 78999999999999 99999999999999999999999999 42000000 000000011000000
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCV 745 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~ 745 (956)
......|+...++.+.++-..+.++|+|||.||++|++.||+|++| ++.+..++.||.++..+++.++.++++.....
T Consensus 241 ~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~ 318 (335)
T 3n28_A 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVA 318 (335)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHH
T ss_pred cChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHH
Confidence 0111233344444455544457899999999999999999999999 68889999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHH
Q 043517 746 CNNIRKFIQLHLTVN 760 (956)
Q Consensus 746 ~~~i~~~~~~~l~~n 760 (956)
.++++.++.|.+.||
T Consensus 319 ~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 319 QQKLSWKSKEGHHHH 333 (335)
T ss_dssp TTCCCCC--------
T ss_pred hhhhccccccccccc
Confidence 889999999988876
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.1e-10 Score=126.87 Aligned_cols=68 Identities=19% Similarity=0.152 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCe--eeccCChhHHHHHHHH
Q 043517 673 LDKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDI--VILDENFTTIAANLKW 741 (956)
Q Consensus 673 ~~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~--vl~~~~~~~i~~~i~~ 741 (956)
..|...++.+.++ | +.++++||+.||.+|++.|++|+||| |+.+.+|++||+ ++.+++.++|+++|++
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~~ 281 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLRK 281 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHHH
Confidence 3587777777654 3 57999999999999999999999999 999999999985 7789999999999864
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-11 Score=125.94 Aligned_cols=103 Identities=17% Similarity=0.149 Sum_probs=86.7
Q ss_pred HHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecCh
Q 043517 593 QAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASP 672 (956)
Q Consensus 593 ~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p 672 (956)
.+|+.|+ +.|+++.++||++...+..+++++|+ +. +|....
T Consensus 59 ~~l~~L~-~~G~~~~ivT~~~~~~~~~~l~~lgi--~~-----------------------------------~~~~~k- 99 (195)
T 3n07_A 59 YGVKALM-NAGIEIAIITGRRSQIVENRMKALGI--SL-----------------------------------IYQGQD- 99 (195)
T ss_dssp HHHHHHH-HTTCEEEEECSSCCHHHHHHHHHTTC--CE-----------------------------------EECSCS-
T ss_pred HHHHHHH-HCCCEEEEEECcCHHHHHHHHHHcCC--cE-----------------------------------EeeCCC-
Confidence 4599999 99999999999999999999999999 54 454443
Q ss_pred hhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHH
Q 043517 673 LDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIA 736 (956)
Q Consensus 673 ~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~ 736 (956)
.|...++.+.++ .+.++++||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++..+++
T Consensus 100 -~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~ 165 (195)
T 3n07_A 100 -DKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAV 165 (195)
T ss_dssp -SHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHH
T ss_pred -CcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHH
Confidence 465555555443 468999999999999999999999999 89999999999999988766643
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=4.9e-11 Score=121.48 Aligned_cols=123 Identities=11% Similarity=0.061 Sum_probs=100.5
Q ss_pred HHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEec--C
Q 043517 594 AIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANA--S 671 (956)
Q Consensus 594 ~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~--~ 671 (956)
+|+.|+ +.|+++.++||++...+..+++++|+ +. +|... .
T Consensus 54 ~l~~L~-~~g~~~~ivTn~~~~~~~~~l~~lgl--~~-----------------------------------~~~~~kpk 95 (191)
T 3n1u_A 54 GLKLLM-AAGIQVAIITTAQNAVVDHRMEQLGI--TH-----------------------------------YYKGQVDK 95 (191)
T ss_dssp HHHHHH-HTTCEEEEECSCCSHHHHHHHHHHTC--CE-----------------------------------EECSCSSC
T ss_pred HHHHHH-HCCCeEEEEeCcChHHHHHHHHHcCC--cc-----------------------------------ceeCCCCh
Confidence 699999 99999999999999999999999999 54 44444 3
Q ss_pred hhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhH----HHHHHHHhhhHHH
Q 043517 672 PLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTT----IAANLKWGRCVCN 747 (956)
Q Consensus 672 p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~----i~~~i~~gR~~~~ 747 (956)
|+....+.+.++-..+.++|+||+.||++|++.|+++++|+ ++.+.++..||+++.+++..+ +.+.+...|..+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~ 174 (191)
T 3n1u_A 96 RSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAE 174 (191)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHH
Confidence 44455666666555678999999999999999999999999 888999999999999887554 5555666777777
Q ss_pred HHHHHHHH
Q 043517 748 NIRKFIQL 755 (956)
Q Consensus 748 ~i~~~~~~ 755 (956)
++.+.+.+
T Consensus 175 ~~~~~~~~ 182 (191)
T 3n1u_A 175 LAITGYLK 182 (191)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 76666544
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.1e-11 Score=118.36 Aligned_cols=114 Identities=18% Similarity=0.113 Sum_probs=93.0
Q ss_pred CcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHH--hcCCcccCCCCCCCCCCcceeeechhhhc
Q 043517 574 GLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAI--NSGLILKPGAEDHSNGYDAAVIEASVFRS 651 (956)
Q Consensus 574 ~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~--~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~ 651 (956)
+...++.+.++|. .+|+.|+ +.|+++.++||+ ..+..+++ ++|+ +
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk-~~Gi~~~I~Tg~--~~~~~~l~~l~lgi--~---------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLK-KSGIEVRLISER--ACSKQTLSALKLDC--K---------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHH-HTTCEEEEECSS--CCCHHHHHTTCCCC--C----------------------
T ss_pred CCCEEEEEecCcH------HHHHHHH-HCCCEEEEEeCc--HHHHHHHHHhCCCc--E----------------------
Confidence 4456777777777 3899999 999999999999 67888888 5666 2
Q ss_pred CCHHHHHhhhccceEEEecChhhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeee
Q 043517 652 SSEETRSLMVDNVRVMANASPLDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVI 727 (956)
Q Consensus 652 ~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl 727 (956)
+|. .+++|...++.+.++ .+.++|+||+.||.+|++.|++++||+ ++.+.+++.||+++
T Consensus 77 --------------~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~ 139 (168)
T 3ewi_A 77 --------------TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYIC 139 (168)
T ss_dssp --------------EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEEC
T ss_pred --------------EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEe
Confidence 221 235687777776654 468999999999999999999999999 99999999999999
Q ss_pred ccCChhHHHH
Q 043517 728 LDENFTTIAA 737 (956)
Q Consensus 728 ~~~~~~~i~~ 737 (956)
.+++-+++++
T Consensus 140 ~~~~~~G~~~ 149 (168)
T 3ewi_A 140 KCSGGRGAIR 149 (168)
T ss_dssp SSCTTTTHHH
T ss_pred CCCCCccHHH
Confidence 9888777444
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.12 E-value=4.5e-10 Score=122.07 Aligned_cols=68 Identities=19% Similarity=0.203 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 673 LDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 673 ~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
..|...++.+.++ .+.|+++||+.||.+|++.|++|+||| |+.+.+|+.||+++.+++.++++++|++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 4577777766654 357999999999999999999999999 9999999999999999999999999875
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.11 E-value=3e-10 Score=122.70 Aligned_cols=67 Identities=24% Similarity=0.350 Sum_probs=59.7
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ .+.++++||+.||.+|++.|++|+||| |+.+.+|+.||+|+.+++.++++++|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 677777666554 357999999999999999999999999 9999999999999999999999999875
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-10 Score=119.59 Aligned_cols=100 Identities=17% Similarity=0.136 Sum_probs=87.0
Q ss_pred HHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChh
Q 043517 594 AIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPL 673 (956)
Q Consensus 594 ~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~ 673 (956)
+++.|+ ++|+++.++||++...+..+++++|+ +. +|... .
T Consensus 84 ~L~~L~-~~G~~l~I~T~~~~~~~~~~l~~lgi--~~-----------------------------------~f~~~--k 123 (211)
T 3ij5_A 84 GIRCLI-TSDIDVAIITGRRAKLLEDRANTLGI--TH-----------------------------------LYQGQ--S 123 (211)
T ss_dssp HHHHHH-HTTCEEEEECSSCCHHHHHHHHHHTC--CE-----------------------------------EECSC--S
T ss_pred HHHHHH-HCCCEEEEEeCCCHHHHHHHHHHcCC--ch-----------------------------------hhccc--C
Confidence 999999 99999999999999999999999999 54 55544 4
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTT 734 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~ 734 (956)
.|.+.++.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++-.+
T Consensus 124 ~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 124 DKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTT
T ss_pred ChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCc
Confidence 577777766654 578999999999999999999999999 889999999999998775444
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.08 E-value=4.2e-10 Score=122.08 Aligned_cols=67 Identities=15% Similarity=0.101 Sum_probs=60.2
Q ss_pred hHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ | +.|+++||+.||.+|++.|++|+||| |+.+.+|+.||+|+.+++.++++++|++
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 587777776654 3 57999999999999999999999999 9999999999999999999999999864
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.05 E-value=6.9e-10 Score=118.47 Aligned_cols=67 Identities=21% Similarity=0.171 Sum_probs=58.7
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|..-++.+.++ .+.++++||+.||.+|++.|++|+||| |+.+.+|+.||+|+.+++.++++++|++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 466666666543 467999999999999999999999999 9999999999999999999999999875
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.05 E-value=5.2e-10 Score=112.25 Aligned_cols=104 Identities=14% Similarity=0.145 Sum_probs=87.6
Q ss_pred HHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChh
Q 043517 594 AIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPL 673 (956)
Q Consensus 594 ~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~ 673 (956)
+++.|+ +.|+++.++||++...+..+++++|+ + ++... .
T Consensus 47 ~l~~L~-~~g~~~~i~T~~~~~~~~~~~~~lgi--~------------------------------------~~~~~--~ 85 (176)
T 3mmz_A 47 GIAALR-KSGLTMLILSTEQNPVVAARARKLKI--P------------------------------------VLHGI--D 85 (176)
T ss_dssp HHHHHH-HTTCEEEEEESSCCHHHHHHHHHHTC--C------------------------------------EEESC--S
T ss_pred HHHHHH-HCCCeEEEEECcChHHHHHHHHHcCC--e------------------------------------eEeCC--C
Confidence 899999 99999999999999999999999999 3 23333 4
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
.|.+.++.+.++ .+.++++||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++..++.+.+
T Consensus 86 ~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 86 RKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 466666665544 478999999999999999999999999 88999999999999988866655443
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.05 E-value=5.5e-10 Score=119.84 Aligned_cols=68 Identities=21% Similarity=0.262 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 673 LDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 673 ~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
..|...++.+.++ .+.++++||+.||.+|++.|++|+||| |+.+.+|++||+|+.+++.++++++|++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 3577777666654 357999999999999999999999999 9999999999999999999999999875
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=9.4e-10 Score=118.27 Aligned_cols=67 Identities=19% Similarity=0.168 Sum_probs=59.5
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ .+.++++||+.||.+|++.|++|+||| |+.+.+|+.||+++.+++.++++++|++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 477666665544 468999999999999999999999999 9999999999999999999999999875
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.01 E-value=9.3e-10 Score=118.83 Aligned_cols=67 Identities=21% Similarity=0.251 Sum_probs=48.3
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ .+.++++||+.||.+|++.|++|+||| |+.+..|+.||+|+.+++.++|+++|++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIRK 267 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC-
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHHH
Confidence 477777766654 357999999999999999999999999 9999999999999999999999998764
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-09 Score=118.85 Aligned_cols=68 Identities=13% Similarity=0.127 Sum_probs=60.3
Q ss_pred hhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 673 LDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 673 ~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
..|...++.+.++ .+.++++||+.||.+|++.|++|+||| |+.+.+|+.||+|+.+++.++++++|++
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 4577777776654 357999999999999999999999999 9999999999999999999999999874
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=2.9e-09 Score=103.52 Aligned_cols=142 Identities=13% Similarity=0.182 Sum_probs=96.1
Q ss_pred ccccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhc-CCChhhhcc-cccccc
Q 043517 397 KTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFL-DVDGDKMKQ-NCTVEA 474 (956)
Q Consensus 397 KTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~-~~~~~~~~~-~~~~~~ 474 (956)
..||+|-|++++.++.+.+.. + ..++|..+++++..++| |+.+||+++++ .. +........ ..+..+
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~------~--e~elL~lAAs~E~~SeH--Pla~AIv~~A~-~~~~l~~~~~~~~~~~~~~ 81 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGV------D--EKTLADAAQLASLADET--PEGRSIVILAK-QRFNLRERDVQSLHATFVP 81 (156)
T ss_dssp --------CEEEEEEEECTTS------C--HHHHHHHHHHTTSSCCS--HHHHHHHHHHH-HHTTCCCCCHHHHTCEEEE
T ss_pred CCCceecCCCeEEEEEecCCC------C--HHHHHHHHHHHhCcCCC--HHHHHHHHHHH-HhcCCCcccccccccceee
Confidence 479999999999999875432 1 23677778888876666 99999999998 55 665432210 112479
Q ss_pred cCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeee
Q 043517 475 FNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISF 554 (956)
Q Consensus 475 F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~ 554 (956)
|++..+++++.+ + ++ -+.+|+++.|.+.+... |. .++ +.+.+.+++++. +|.+++++
T Consensus 82 F~a~~G~~Gv~v---~-----G~---~v~vGn~~~i~~l~~~~----gi--~~~----~~~~~~~~~la~--~G~T~v~V 138 (156)
T 1svj_A 82 FTAQSRMSGINI---D-----NR---MIRKGSVDAIRRHVEAN----GG--HFP----TDVDQKVDQVAR--QGATPLVV 138 (156)
T ss_dssp EETTTTEEEEEE---T-----TE---EEEEEEHHHHHHHHHHH----TC--CCC----HHHHHHHHHHHH--TTCEEEEE
T ss_pred ccccCCCCeEEE---C-----CE---EEEEeCcHHHHHHHHHc----CC--CCc----HHHHHHHHHHHh--CCCCEEEE
Confidence 999999888854 2 32 35789998777666421 11 122 246677888899 99999999
Q ss_pred EEeeccccchHHHHhhhccCcEEEEEeeecccCcH
Q 043517 555 ACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYAS 589 (956)
Q Consensus 555 A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr~ 589 (956)
|. |..++|++++.|++||
T Consensus 139 A~-----------------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 139 VE-----------------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp EE-----------------TTEEEEEEEEEECCCC
T ss_pred EE-----------------CCEEEEEEEEecCCCC
Confidence 97 7899999999999996
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=1.2e-09 Score=108.05 Aligned_cols=105 Identities=19% Similarity=0.145 Sum_probs=86.4
Q ss_pred HHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecChh
Q 043517 594 AIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPL 673 (956)
Q Consensus 594 ~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p~ 673 (956)
+++.|+ +.|+++.++||++...+..+++++|+ +. +|....|
T Consensus 39 ~l~~l~-~~g~~~~i~T~~~~~~~~~~~~~~gl--~~-----------------------------------~~~~~kp- 79 (164)
T 3e8m_A 39 GIFWAH-NKGIPVGILTGEKTEIVRRRAEKLKV--DY-----------------------------------LFQGVVD- 79 (164)
T ss_dssp HHHHHH-HTTCCEEEECSSCCHHHHHHHHHTTC--SE-----------------------------------EECSCSC-
T ss_pred HHHHHH-HCCCEEEEEeCCChHHHHHHHHHcCC--CE-----------------------------------eecccCC-
Confidence 899999 99999999999999999999999999 54 4444444
Q ss_pred hHHHHHHHHHh----cCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhH-HHHHH
Q 043517 674 DKLLMVQCLKQ----KGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTT-IAANL 739 (956)
Q Consensus 674 ~K~~iv~~lq~----~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~-i~~~i 739 (956)
|.+.++.+.+ ..+.++|+||+.||.+|++.|+++++++ ++.+..++.||+++.+++..+ +.+++
T Consensus 80 -k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~ 148 (164)
T 3e8m_A 80 -KLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFV 148 (164)
T ss_dssp -HHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHH
T ss_pred -hHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHH
Confidence 4444444333 3468999999999999999999999999 899999999999999888555 44443
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.94 E-value=2.6e-09 Score=112.07 Aligned_cols=150 Identities=17% Similarity=0.153 Sum_probs=103.4
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeee-chh---------------
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIE-ASV--------------- 648 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~-g~~--------------- 648 (956)
..+.+.+.+++++++ +.|++++++|||+...+..+.+.+|+ +... . ..+...+.. |..
T Consensus 19 ~~i~~~~~~al~~l~-~~G~~v~i~TGR~~~~~~~~~~~l~~--~~~~--i-~~nGa~i~~~~~~~~~~~l~~~~~i~~~ 92 (231)
T 1wr8_A 19 RMIHEKALEAIRRAE-SLGIPIMLVTGNTVQFAEAASILIGT--SGPV--V-AEDGGAISYKKKRIFLASMDEEWILWNE 92 (231)
T ss_dssp SCBCHHHHHHHHHHH-HTTCCEEEECSSCHHHHHHHHHHHTC--CSCE--E-EGGGTEEEETTEEEESCCCSHHHHHHHH
T ss_pred CcCCHHHHHHHHHHH-HCCCEEEEEcCCChhHHHHHHHHcCC--CCeE--E-EeCCcEEEeCCEEEEeccHHHHHHHHHH
Confidence 346789999999999 99999999999999999999999997 3200 0 000000000 000
Q ss_pred ---------h--------------h-cCCHHHHHhhhc----cceEE-----EecCh--hhHHHHHHHHHhc----CCeE
Q 043517 649 ---------F--------------R-SSSEETRSLMVD----NVRVM-----ANASP--LDKLLMVQCLKQK----GEVV 689 (956)
Q Consensus 649 ---------~--------------~-~~~~~~~~~~~~----~~~v~-----ar~~p--~~K~~iv~~lq~~----g~~v 689 (956)
+ . ....+....+.. ...+. ....| ..|...++.+.++ .+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~ 172 (231)
T 1wr8_A 93 IRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEV 172 (231)
T ss_dssp HHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGE
T ss_pred HHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHE
Confidence 0 0 002222222211 12232 12223 3577777776553 3579
Q ss_pred EEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 690 AVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 690 ~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
+++||+.||.+|++.|+++++|+ ++.+..++.||+++.+++.+++.++|++
T Consensus 173 ~~iGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 173 AHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp EEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 99999999999999999999999 8888889999999998888999988864
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.82 E-value=1.8e-08 Score=109.03 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=59.3
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ .+.++++||+.||.+|++.|++|+||+ ++.+..++.||+++.+++.+++.++|++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHHH
Confidence 688777777654 357999999999999999999999999 8989899999999999999999998864
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.81 E-value=9.5e-09 Score=117.77 Aligned_cols=136 Identities=13% Similarity=0.129 Sum_probs=105.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+++|++.+.++.|+ +.|+++.++||.....+..+++++|+ +..- .....+.+| .
T Consensus 256 ~~~pg~~e~l~~Lk-~~G~~~~ivS~~~~~~~~~~~~~lgl--~~~~-----~~~l~~~dg------------------~ 309 (415)
T 3p96_A 256 ELMPGARTTLRTLR-RLGYACGVVSGGFRRIIEPLAEELML--DYVA-----ANELEIVDG------------------T 309 (415)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHHHTTC--SEEE-----EECEEEETT------------------E
T ss_pred ccCccHHHHHHHHH-HCCCEEEEEcCCcHHHHHHHHHHcCc--ccee-----eeeEEEeCC------------------E
Confidence 78999999999999 99999999999999999999999999 4300 000000111 0
Q ss_pred EEEe-----cChhhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHH
Q 043517 666 VMAN-----ASPLDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIA 736 (956)
Q Consensus 666 v~ar-----~~p~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~ 736 (956)
+.++ ..+..|.++++.+.++ .+.++++||+.||.+|++.||+|+++ ++.+..++.||+++..+++.++.
T Consensus 310 ~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll 387 (415)
T 3p96_A 310 LTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVL 387 (415)
T ss_dssp EEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHH
T ss_pred EEeeEccCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHH
Confidence 1111 1245676666665543 36899999999999999999999999 57888899999999999999999
Q ss_pred HHHHHhhhHHHHH
Q 043517 737 ANLKWGRCVCNNI 749 (956)
Q Consensus 737 ~~i~~gR~~~~~i 749 (956)
.++..+|.-+...
T Consensus 388 ~~l~~~~~~~~~~ 400 (415)
T 3p96_A 388 FLLGVTRGEIEAA 400 (415)
T ss_dssp HHTTCCHHHHHHH
T ss_pred HHhCCCHHHHHHh
Confidence 9998888766554
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.81 E-value=6.1e-09 Score=107.31 Aligned_cols=131 Identities=9% Similarity=0.025 Sum_probs=95.6
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
-+++|++.+.++.|+ +.|+++.++|+.....+..+.+++|+ ..- -..++...+- ..
T Consensus 74 ~~~~~~~~~~l~~l~-~~g~~~~i~S~~~~~~~~~~l~~~gl--~~~--------f~~~~~~~~~-------------~~ 129 (217)
T 3m1y_A 74 LPLFEGALELVSALK-EKNYKVVCFSGGFDLATNHYRDLLHL--DAA--------FSNTLIVEND-------------AL 129 (217)
T ss_dssp CCBCBTHHHHHHHHH-TTTEEEEEEEEEEHHHHHHHHHHHTC--SEE--------EEEEEEEETT-------------EE
T ss_pred CcCCCCHHHHHHHHH-HCCCEEEEEcCCchhHHHHHHHHcCc--chh--------ccceeEEeCC-------------EE
Confidence 458899999999999 99999999999999999999999999 430 1111110000 00
Q ss_pred e-EEEe--cChhhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHH
Q 043517 665 R-VMAN--ASPLDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 665 ~-v~ar--~~p~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~ 737 (956)
. .++. .....|.+.++.+.++ .+.++++||+.||++|++.||++++| ++.+..++.||+++.++++..+..
T Consensus 130 ~~~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~ 207 (217)
T 3m1y_A 130 NGLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKP 207 (217)
T ss_dssp EEEEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTT
T ss_pred EeeeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHH
Confidence 0 0111 1234466665555443 46899999999999999999999999 678888999999999999999888
Q ss_pred HHHH
Q 043517 738 NLKW 741 (956)
Q Consensus 738 ~i~~ 741 (956)
++++
T Consensus 208 ~~~~ 211 (217)
T 3m1y_A 208 LIEG 211 (217)
T ss_dssp C---
T ss_pred Hhcc
Confidence 7754
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1.7e-08 Score=108.50 Aligned_cols=68 Identities=22% Similarity=0.194 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 673 LDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 673 ~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
..|...++.+.++ .+.++++||+.||.+|++.|++|++|+ |+.+..++.||+++.+++.++++++|++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 3677777776654 357999999999999999999999999 8999999999999999999999998864
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=9e-09 Score=105.23 Aligned_cols=128 Identities=14% Similarity=0.158 Sum_probs=89.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|+++++++.++ +.|+++.++||+....+..+.+.+|+ +..- ...+..... .. ...
T Consensus 76 ~l~~~~~~~l~~l~-~~g~~~~i~T~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~-----------~~-~~~ 133 (211)
T 1l7m_A 76 TPTEGAEETIKELK-NRGYVVAVVSGGFDIAVNKIKEKLGL--DYAF-------ANRLIVKDG-----------KL-TGD 133 (211)
T ss_dssp CBCTTHHHHHHHHH-HTTEEEEEEEEEEHHHHHHHHHHHTC--SEEE-------EEEEEEETT-----------EE-EEE
T ss_pred CCCccHHHHHHHHH-HCCCEEEEEcCCcHHHHHHHHHHcCC--CeEE-------EeeeEEECC-----------EE-cCC
Confidence 46689999999999 99999999999999888888999998 3200 000000000 00 000
Q ss_pred EEEe-cChhhHHHHHHHHHh-cC---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHH
Q 043517 666 VMAN-ASPLDKLLMVQCLKQ-KG---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 666 v~ar-~~p~~K~~iv~~lq~-~g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~ 737 (956)
+... ..+..|.+.+..+.+ .| +.++++||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 134 ~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 134 VEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp EECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred cccCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 0001 123467655555443 33 57999999999999999999999997 45666888999998877877654
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.3e-08 Score=98.42 Aligned_cols=113 Identities=12% Similarity=0.051 Sum_probs=89.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
...+++.++++.|+ +.|++++++||++...+..+.+++|+ ..
T Consensus 36 ~~~~~~~~~l~~l~-~~g~~~~i~T~~~~~~~~~~l~~~gl--~~----------------------------------- 77 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQ-KMGITLAVISGRDSAPLITRLKELGV--EE----------------------------------- 77 (162)
T ss_dssp EEEHHHHHHHHHHH-TTTCEEEEEESCCCHHHHHHHHHTTC--CE-----------------------------------
T ss_pred eecccHHHHHHHHH-HCCCEEEEEeCCCcHHHHHHHHHcCC--Hh-----------------------------------
Confidence 34688899999999 99999999999999999999999999 43
Q ss_pred EEEecCh--hhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHH
Q 043517 666 VMANASP--LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 666 v~ar~~p--~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~ 737 (956)
.|....| +--..+.+.+.-..+.++++||+.||.+|.+.|+++++++ ++.+..++.||+++.+.+..++.+
T Consensus 78 ~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~ 150 (162)
T 2p9j_A 78 IYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALR 150 (162)
T ss_dssp EEECC--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHH
T ss_pred hccCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHH
Confidence 3433333 2222333333333568999999999999999999999998 788888889999999888777773
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.75 E-value=4.6e-08 Score=106.94 Aligned_cols=67 Identities=19% Similarity=0.212 Sum_probs=59.0
Q ss_pred hHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeec-cCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVIL-DENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~-~~~~~~i~~~i~~ 741 (956)
.|...++.+.+. | +.++++||+.||.+|++.|++|+||+ ++.+..++.||+++. +++.++++++|++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 677777776654 2 57999999999999999999999999 899999999999999 9999999998864
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=2e-08 Score=101.81 Aligned_cols=107 Identities=17% Similarity=0.161 Sum_probs=86.2
Q ss_pred HHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecCh
Q 043517 593 QAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASP 672 (956)
Q Consensus 593 ~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p 672 (956)
.+++.|+ +.|++++++||++...+..+++++|+ +. +|....|
T Consensus 60 ~~l~~L~-~~g~~v~ivT~~~~~~~~~~l~~lgl--~~-----------------------------------~~~~~kp 101 (188)
T 2r8e_A 60 YGIRCAL-TSDIEVAIITGRKAKLVEDRCATLGI--TH-----------------------------------LYQGQSN 101 (188)
T ss_dssp HHHHHHH-TTTCEEEEECSSCCHHHHHHHHHHTC--CE-----------------------------------EECSCSC
T ss_pred HHHHHHH-HCCCeEEEEeCCChHHHHHHHHHcCC--ce-----------------------------------eecCCCC
Confidence 4899999 99999999999999999999999999 43 3433333
Q ss_pred hhHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHH-HHHH
Q 043517 673 LDKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIA-ANLK 740 (956)
Q Consensus 673 ~~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~-~~i~ 740 (956)
|.+.++.+.++ | +.++++||+.||.+|++.|+++++++ ++.+..++.||+++.+.+..+++ ++++
T Consensus 102 --k~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 102 --KLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp --SHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred --CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 44454444333 4 68999999999999999999999998 77788888999999987666666 5443
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.71 E-value=3.1e-08 Score=109.92 Aligned_cols=151 Identities=15% Similarity=0.171 Sum_probs=101.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeech------------------
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEAS------------------ 647 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~------------------ 647 (956)
++++++.++++.|+ + |+++.++||+...-+....+.+|+ .+. . ....+...
T Consensus 103 ~~~~~~~~~l~~l~-~-g~~~~i~t~~~~~~~~~~~~~~~~-~~~-~-------~~~~~~~~~~~~~~~~~k~~~~~~~~ 171 (332)
T 1y8a_A 103 KFVPDAEKAMATLQ-E-RWTPVVISTSYTQYLRRTASMIGV-RGE-L-------HGTEVDFDSIAVPEGLREELLSIIDV 171 (332)
T ss_dssp CBCTTHHHHHHHHH-T-TCEEEEEEEEEHHHHHHHHHHTTC-CSE-E-------EEEBCCGGGCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-c-CCcEEEEECCceEEEcccchhhhh-hhh-h-------cccccchhhhccccccceeEEecCHH
Confidence 46899999999999 9 999999999987667777777787 221 0 00000000
Q ss_pred hhhcCCHHHHHhhhccc------eEEE----ecChhhHHHHHHHHHhcC--CeEEEEcCCccCHHHhhhC----CccEEe
Q 043517 648 VFRSSSEETRSLMVDNV------RVMA----NASPLDKLLMVQCLKQKG--EVVAVTGMSTRDAPSLKEA----DVGVSI 711 (956)
Q Consensus 648 ~~~~~~~~~~~~~~~~~------~v~a----r~~p~~K~~iv~~lq~~g--~~v~~iGDG~ND~~al~~A----dvGIam 711 (956)
.+....++++ +.+..+ ..+. -..+.+|...++.+.... +.|+++|||.||++|++.| |+||||
T Consensus 172 ~~~~~~~~~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam 250 (332)
T 1y8a_A 172 IASLSGEELF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF 250 (332)
T ss_dssp HHHCCHHHHH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE
T ss_pred HHhhhhHHHH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe
Confidence 0000000111 111100 0011 113556888887666543 4599999999999999999 999999
Q ss_pred CCCChHHHHhcCCeeeccCChhHHHHHH----HHhhhHHHHHHH
Q 043517 712 GERSAQFARDCSDIVILDENFTTIAANL----KWGRCVCNNIRK 751 (956)
Q Consensus 712 g~~~~~~ak~~Ad~vl~~~~~~~i~~~i----~~gR~~~~~i~~ 751 (956)
|+.+.+|+.||+++.+++.+++.++| .+||..+ ++.+
T Consensus 251 --na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 251 --NGNEYALKHADVVIISPTAMSEAKVIELFMERKERAF-EVLS 291 (332)
T ss_dssp --SCCHHHHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGG
T ss_pred --cCCHHHHhhCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHH
Confidence 78999999999999999998887764 4577776 4433
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.7e-08 Score=110.95 Aligned_cols=128 Identities=14% Similarity=0.106 Sum_probs=95.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+++|++.+.++.|+ +.|+++.++||.....+..+++++|+ +.- ...++...+ -.
T Consensus 179 ~l~pg~~e~L~~Lk-~~G~~v~IvSn~~~~~~~~~l~~lgl--~~~--------f~~~l~~~d---------------g~ 232 (317)
T 4eze_A 179 TLSPGLLTILPVIK-AKGFKTAIISGGLDIFTQRLKARYQL--DYA--------FSNTVEIRD---------------NV 232 (317)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHHHHTC--SEE--------EEECEEEET---------------TE
T ss_pred EECcCHHHHHHHHH-hCCCEEEEEeCccHHHHHHHHHHcCC--CeE--------EEEEEEeeC---------------Ce
Confidence 48899999999999 99999999999999999999999999 430 000100000 00
Q ss_pred EEEe-----cChhhHHHHHHHHHh----cCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHH
Q 043517 666 VMAN-----ASPLDKLLMVQCLKQ----KGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIA 736 (956)
Q Consensus 666 v~ar-----~~p~~K~~iv~~lq~----~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~ 736 (956)
.-++ ..+..|.++++.+.+ ..+.++|+||+.||++|++.||+|++++ +.+..++.||.++..+++.++.
T Consensus 233 ~tg~i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll 310 (317)
T 4eze_A 233 LTDNITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLL 310 (317)
T ss_dssp EEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGG
T ss_pred eeeeEecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHH
Confidence 0011 123455555554433 2468999999999999999999999994 6777888999999989999988
Q ss_pred HHHHH
Q 043517 737 ANLKW 741 (956)
Q Consensus 737 ~~i~~ 741 (956)
+++++
T Consensus 311 ~~L~~ 315 (317)
T 4eze_A 311 FLIED 315 (317)
T ss_dssp GGTCS
T ss_pred HHHHh
Confidence 77654
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.69 E-value=1.1e-07 Score=103.24 Aligned_cols=67 Identities=25% Similarity=0.277 Sum_probs=57.6
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.+. .+.++++||+.||.+|++.|++|+||+ ++.+..++.||+++.+++.++++++|++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 465556665543 357999999999999999999999999 8999999999999999999999998864
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.66 E-value=3.1e-08 Score=104.47 Aligned_cols=147 Identities=7% Similarity=0.059 Sum_probs=95.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCc-ccCCC-------CC------CCC--------------
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLI-LKPGA-------ED------HSN-------------- 637 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~-~~~~~-------~~------~~~-------------- 637 (956)
.+.+.+.++|++|+ +.| +++++|||+...+..+.+++ .. +..++ +. ...
T Consensus 23 ~i~~~~~~al~~l~-~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 99 (239)
T 1u02_A 23 YADAGLLSLISDLK-ERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSW 99 (239)
T ss_dssp CCCHHHHHHHHHHH-HHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTH
T ss_pred CCCHHHHHHHHHHh-cCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHH
Confidence 46789999999999 999 99999999999998887765 21 11111 11 000
Q ss_pred --CCcceeeechh---------hhcCCHH---HHHhhh---ccceE-----EEecChh--hHHHHHHHHHhcCCeEEEEc
Q 043517 638 --GYDAAVIEASV---------FRSSSEE---TRSLMV---DNVRV-----MANASPL--DKLLMVQCLKQKGEVVAVTG 693 (956)
Q Consensus 638 --~~~~~~i~g~~---------~~~~~~~---~~~~~~---~~~~v-----~ar~~p~--~K~~iv~~lq~~g~~v~~iG 693 (956)
......+.+.. .....++ .+.+.+ ..+.+ +....|. .|..-++.+.++-. |+++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~G 178 (239)
T 1u02_A 100 VSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIAG 178 (239)
T ss_dssp HHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEEE
T ss_pred HhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEEe
Confidence 00001111110 0011111 111111 12222 2233343 69888888887733 99999
Q ss_pred CCccCHHHhhhC--CccEEeCCCChHHHHhcCCeeecc-CChhHHHHHHHH
Q 043517 694 MSTRDAPSLKEA--DVGVSIGERSAQFARDCSDIVILD-ENFTTIAANLKW 741 (956)
Q Consensus 694 DG~ND~~al~~A--dvGIamg~~~~~~ak~~Ad~vl~~-~~~~~i~~~i~~ 741 (956)
|+.||.+||+.| ++||||| |+ ++.||+++.+ ++.+++.++|++
T Consensus 179 D~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 179 DDATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp SSHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 999999999999 9999999 77 6889999987 778899988864
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.65 E-value=1.6e-07 Score=100.81 Aligned_cols=67 Identities=25% Similarity=0.326 Sum_probs=58.9
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ .+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++.+++.++|++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~~ 260 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLER 260 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHTT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHHH
Confidence 687777777654 367999999999999999999999999 8988899999999999999999998864
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.63 E-value=5.2e-08 Score=101.76 Aligned_cols=129 Identities=20% Similarity=0.195 Sum_probs=97.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.|+ +.|+++.++|+.....+..+.+++|+ ... -..++.+....
T Consensus 104 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~--------------- 157 (237)
T 4ex6_A 104 LLYPGVLEGLDRLS-AAGFRLAMATSKVEKAARAIAELTGL--DTR--------LTVIAGDDSVE--------------- 157 (237)
T ss_dssp GBCTTHHHHHHHHH-HTTEEEEEECSSCHHHHHHHHHHHTG--GGT--------CSEEECTTTSS---------------
T ss_pred ccCCCHHHHHHHHH-hCCCcEEEEcCCChHHHHHHHHHcCc--hhh--------eeeEEeCCCCC---------------
Confidence 46789999999999 99999999999999999999999998 321 22333332211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc---cEEeCCCChHHHHh-cCCeeeccCChhHHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV---GVSIGERSAQFARD-CSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv---GIamg~~~~~~ak~-~Ad~vl~~~~~~~i~~~i~~ 741 (956)
...-.|+--..+.+.+.-..+.++++||+.||+.|.+.||+ +|++|.+..+..+. .||+++. ++..+.++++.
T Consensus 158 -~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l~~ 234 (237)
T 4ex6_A 158 -RGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVTAVLD 234 (237)
T ss_dssp -SCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHHHHHc
Confidence 01123444456666665556789999999999999999999 99998444455554 7999987 88999998887
Q ss_pred hh
Q 043517 742 GR 743 (956)
Q Consensus 742 gR 743 (956)
|+
T Consensus 235 ~~ 236 (237)
T 4ex6_A 235 GH 236 (237)
T ss_dssp C-
T ss_pred cC
Confidence 65
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.63 E-value=2.4e-08 Score=101.13 Aligned_cols=119 Identities=20% Similarity=0.283 Sum_probs=91.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+++|++.+.++.|+ +.|+++.++|+.+...+..+ +.+|+ ..-. .........+
T Consensus 79 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~-~~~~~--~~~~-------~~~~~~~~~~---------------- 131 (201)
T 4ap9_A 79 NVSPEARELVETLR-EKGFKVVLISGSFEEVLEPF-KELGD--EFMA-------NRAIFEDGKF---------------- 131 (201)
T ss_dssp CCCHHHHHHHHHHH-HTTCEEEEEEEEETTTSGGG-TTTSS--EEEE-------EEEEEETTEE----------------
T ss_pred CCChhHHHHHHHHH-HCCCeEEEEeCCcHHHHHHH-HHcCc--hhhe-------eeEEeeCCce----------------
Confidence 78999999999999 99999999999998888888 88998 4300 0011010000
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
--....|..|...++.+ ..+.++++||+.||.+|++.|+++++|+ ++.+ .||+++. ++..+.++++
T Consensus 132 ~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 132 QGIRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp EEEECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEES--SHHHHHHHHH
T ss_pred ECCcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEc--cHHHHHHHHH
Confidence 01344567898888888 6678999999999999999999999999 6665 7999987 6667777665
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=7e-08 Score=102.05 Aligned_cols=67 Identities=16% Similarity=0.092 Sum_probs=58.0
Q ss_pred hHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhc-------CCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDC-------SDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~-------Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ | +.++++||+.||.+|++.|++|++|| ++.+..++. ||+++.+++.++++++|++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 577777776654 2 57999999999999999999999999 899988885 8899999999999998864
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.4e-07 Score=101.54 Aligned_cols=67 Identities=18% Similarity=0.082 Sum_probs=33.3
Q ss_pred hHHHHHHHHHhc-----CCe--EEEEcCCccCHHHhhhCCccEEeCCCCh---HHHHhc--CC-eeeccCChhHHHHHHH
Q 043517 674 DKLLMVQCLKQK-----GEV--VAVTGMSTRDAPSLKEADVGVSIGERSA---QFARDC--SD-IVILDENFTTIAANLK 740 (956)
Q Consensus 674 ~K~~iv~~lq~~-----g~~--v~~iGDG~ND~~al~~AdvGIamg~~~~---~~ak~~--Ad-~vl~~~~~~~i~~~i~ 740 (956)
.|...++.+.+. .+. ++++||+.||.+|++.|++||||+ |+. +..++. || +++.+++.++++++|+
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 465555554432 345 999999999999999999999999 886 555543 78 8998899999999886
Q ss_pred H
Q 043517 741 W 741 (956)
Q Consensus 741 ~ 741 (956)
+
T Consensus 268 ~ 268 (275)
T 1xvi_A 268 H 268 (275)
T ss_dssp -
T ss_pred H
Confidence 4
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=1.4e-07 Score=100.50 Aligned_cols=65 Identities=18% Similarity=0.153 Sum_probs=56.1
Q ss_pred hhHHHHHHHHHhc-C-----CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 673 LDKLLMVQCLKQK-G-----EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 673 ~~K~~iv~~lq~~-g-----~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
..|...++.+.++ | +.++++||+.||.+|++.|++|+||+ |+.+ . .|++++.+++.+++.+++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 5788877777665 3 78999999999999999999999999 8888 4 78899999999999988764
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.53 E-value=1.3e-07 Score=100.93 Aligned_cols=67 Identities=19% Similarity=0.222 Sum_probs=57.0
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ .+.++++||+.||.+|++.|++|++|+ ++.+..+..||+++.+++.+++.+++++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 257 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHHH
Confidence 466666555443 357999999999999999999999999 8988889999999998888899988764
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.52 E-value=7.1e-07 Score=91.10 Aligned_cols=128 Identities=12% Similarity=0.002 Sum_probs=94.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCc-ceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYD-AAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
++.|++.+.++.|+ +. +++.++|+.....+..+.+++|+ ..- - ..+..+.+.. .
T Consensus 69 ~~~~g~~~~l~~l~-~~-~~~~i~s~~~~~~~~~~l~~~gl--~~~--------f~~~~~~~~~~~-------------~ 123 (206)
T 1rku_A 69 KPLEGAVEFVDWLR-ER-FQVVILSDTFYEFSQPLMRQLGF--PTL--------LCHKLEIDDSDR-------------V 123 (206)
T ss_dssp CCCTTHHHHHHHHH-TT-SEEEEEEEEEHHHHHHHHHHTTC--CCE--------EEEEEEECTTSC-------------E
T ss_pred CCCccHHHHHHHHH-hc-CcEEEEECChHHHHHHHHHHcCC--cce--------ecceeEEcCCce-------------E
Confidence 57899999999999 88 99999999999999999999999 430 1 1122211110 0
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
...-.-.|+.|...++.+...++.++|+||+.||.+|.+.||++++++ ...+ .+..++.++.-+++..+.++++
T Consensus 124 ~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 124 VGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APEN-VIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp EEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHH-HHHHCTTSCEECSHHHHHHHHH
T ss_pred EeeecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC-CcHH-HHHHHhhhccccchHHHHHHHH
Confidence 001125788899999999988899999999999999999999999985 4443 4444444332357888887764
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=8.6e-08 Score=97.95 Aligned_cols=130 Identities=12% Similarity=0.082 Sum_probs=95.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ..-- + ...++++.. .
T Consensus 70 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~~~l~~~~l--~~~f-----~-~~~i~~~~~-~--------------- 124 (205)
T 3m9l_A 70 RPAPGAVELVRELA-GRGYRLGILTRNARELAHVTLEAIGL--ADCF-----A-EADVLGRDE-A--------------- 124 (205)
T ss_dssp EECTTHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHHTTC--GGGS-----C-GGGEECTTT-S---------------
T ss_pred CCCccHHHHHHHHH-hcCCeEEEEeCCchHHHHHHHHHcCc--hhhc-----C-cceEEeCCC-C---------------
Confidence 35689999999999 99999999999999999999999999 3200 0 011222110 0
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc-cEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhh
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV-GVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRC 744 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~ 744 (956)
...-.|+--..+.+.+.-..+.++++||+.||..|.+.||+ +|+|+ ++.+..++.||+++. ++..+...++..|.
T Consensus 125 -~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~--~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 125 -PPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHAR--DCAQLRDLLSAEGH 200 (205)
T ss_dssp -CCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECS--SHHHHHHHHHHTTC
T ss_pred -CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeC--CHHHHHHHHHhccc
Confidence 01112333344444444445789999999999999999999 99999 777777888999997 88889888877554
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.42 E-value=2e-07 Score=98.76 Aligned_cols=57 Identities=23% Similarity=0.124 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHhc-----CCeEEEEcCCccCHHHhhhCCccEEeCCCCh-HHHHhcCCeeeccC
Q 043517 673 LDKLLMVQCLKQK-----GEVVAVTGMSTRDAPSLKEADVGVSIGERSA-QFARDCSDIVILDE 730 (956)
Q Consensus 673 ~~K~~iv~~lq~~-----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~-~~ak~~Ad~vl~~~ 730 (956)
..|..-++.+.+. .+.|+++||+.||.+||+.|++|+||| |+. +..++.||+++.+.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~~~ 240 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDVLE 240 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEeccc
Confidence 3587777766543 368999999999999999999999999 887 67888899988643
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.42 E-value=4.3e-07 Score=92.93 Aligned_cols=129 Identities=12% Similarity=0.024 Sum_probs=88.5
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
++|++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ .... .. ....+..+... ..-
T Consensus 83 ~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~~~~~~~~~--~~~~---~~-~~~~~~~~~~~--------------~~~ 141 (219)
T 3kd3_A 83 LTDGIKELVQDLK-NKGFEIWIFSGGLSESIQPFADYLNI--PREN---IF-AVETIWNSDGS--------------FKE 141 (219)
T ss_dssp BCTTHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHHHHTC--CGGG---EE-EEEEEECTTSB--------------EEE
T ss_pred CChhHHHHHHHHH-HCCCeEEEEcCCcHHHHHHHHHHcCC--Cccc---EE-EeeeeecCCCc--------------eec
Confidence 7799999999999 99999999999999999999999999 3200 00 00001100000 000
Q ss_pred E--EecChhhHHHHHHHH-HhcCCeEEEEcCCccCHHHhhh----CCccEEeCCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 667 M--ANASPLDKLLMVQCL-KQKGEVVAVTGMSTRDAPSLKE----ADVGVSIGERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 667 ~--ar~~p~~K~~iv~~l-q~~g~~v~~iGDG~ND~~al~~----AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
+ ...+|..+.+.+... .-..+.++++||+.||.+|++. +.++++++ ++.+..+..||+++. ++..+.+++
T Consensus 142 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 142 LDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp EECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred cCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--CHHHHHHhh
Confidence 1 122445666666544 4457899999999999999975 45555666 667778889999987 666666543
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.38 E-value=3.3e-07 Score=94.71 Aligned_cols=129 Identities=11% Similarity=0.064 Sum_probs=91.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+.+++|+ ... -..++.+.....
T Consensus 86 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~~-------------- 140 (226)
T 3mc1_A 86 KVYDGIEALLSSLK-DYGFHLVVATSKPTVFSKQILEHFKL--AFY--------FDAIVGSSLDGK-------------- 140 (226)
T ss_dssp CBCTTHHHHHHHHH-HHTCEEEEEEEEEHHHHHHHHHHTTC--GGG--------CSEEEEECTTSS--------------
T ss_pred ccCcCHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHHhCC--Hhh--------eeeeeccCCCCC--------------
Confidence 46799999999999 99999999999999999999999998 320 122222211100
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc---cEEeCCCChHHH-HhcCCeeeccCChhHHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV---GVSIGERSAQFA-RDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv---GIamg~~~~~~a-k~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
..-.|+--..+.+.+.-..+.++++||+.||+.|.+.||+ ++++|....+.. +..||+++. ++..+.+++..
T Consensus 141 --~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 141 --LSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp --SCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred --CCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 0012222234444444445689999999999999999999 888883333333 578999997 78888888765
Q ss_pred hh
Q 043517 742 GR 743 (956)
Q Consensus 742 gR 743 (956)
.+
T Consensus 217 ~~ 218 (226)
T 3mc1_A 217 LR 218 (226)
T ss_dssp C-
T ss_pred Hh
Confidence 43
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.37 E-value=3.1e-07 Score=94.37 Aligned_cols=123 Identities=12% Similarity=0.004 Sum_probs=87.2
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.++ +.|+++.++|++ ..+..+.+.+|+ ... -..++.+....
T Consensus 91 ~~~~~~~~~l~~l~-~~g~~~~i~t~~--~~~~~~l~~~~l-~~~---------f~~~~~~~~~~--------------- 142 (221)
T 2wf7_A 91 DVYPGILQLLKDLR-SNKIKIALASAS--KNGPFLLERMNL-TGY---------FDAIADPAEVA--------------- 142 (221)
T ss_dssp GBCTTHHHHHHHHH-HTTCEEEECCCC--TTHHHHHHHTTC-GGG---------CSEECCTTTSS---------------
T ss_pred CCCCCHHHHHHHHH-HCCCeEEEEcCc--HHHHHHHHHcCh-HHH---------cceEeccccCC---------------
Confidence 46789999999999 999999999998 455677788898 221 12222222110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+--..+.+.+.-..+.++++||+.||.+|++.||++++|. ++.+..+ .||+++.+.+.-++..++
T Consensus 143 -~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 143 -ASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp -SCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred -CCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHHHH
Confidence 0111233334455555444578999999999999999999999999 7877777 899999876665666554
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.35 E-value=4e-07 Score=94.34 Aligned_cols=130 Identities=11% Similarity=0.018 Sum_probs=93.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ... ...++.+....
T Consensus 91 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~--------------- 144 (233)
T 3s6j_A 91 IALPGAVELLETLD-KENLKWCIATSGGIDTATINLKALKL--DIN--------KINIVTRDDVS--------------- 144 (233)
T ss_dssp EECTTHHHHHHHHH-HTTCCEEEECSSCHHHHHHHHHTTTC--CTT--------SSCEECGGGSS---------------
T ss_pred ccCCCHHHHHHHHH-HCCCeEEEEeCCchhhHHHHHHhcch--hhh--------hheeeccccCC---------------
Confidence 35689999999999 99999999999999999999999998 431 12233322211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc---cEEeCCCChHHHHhc-CCeeeccCChhHHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV---GVSIGERSAQFARDC-SDIVILDENFTTIAANLKW 741 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv---GIamg~~~~~~ak~~-Ad~vl~~~~~~~i~~~i~~ 741 (956)
...-.|+--..+.+.+.-..+.++++||+.||..|.+.||+ ++++|.+..+..+.. ||+++. ++..+.+.++.
T Consensus 145 -~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~~ 221 (233)
T 3s6j_A 145 -YGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLDE 221 (233)
T ss_dssp -CCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGGG
T ss_pred -CCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHHH
Confidence 01112333334444444345789999999999999999999 677775566665654 999987 88888888876
Q ss_pred hhh
Q 043517 742 GRC 744 (956)
Q Consensus 742 gR~ 744 (956)
...
T Consensus 222 ~~~ 224 (233)
T 3s6j_A 222 IAS 224 (233)
T ss_dssp TCC
T ss_pred Hhh
Confidence 533
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.33 E-value=6.2e-07 Score=97.16 Aligned_cols=132 Identities=15% Similarity=0.126 Sum_probs=90.9
Q ss_pred cCcHHHHHHHHHHHhhC-CCEEEEEcCC---------------------CHHHHHHHHHhcCCcccCCCCCCCCCCccee
Q 043517 586 AYASEVKQAIEDCRESA-GIKIKLILED---------------------DINIARLIAINSGLILKPGAEDHSNGYDAAV 643 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~-Gi~v~m~TGd---------------------~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~ 643 (956)
.+++++.+.++.++ +. |+++.+.|.. ....+..+.++.|+ .. .+
T Consensus 122 ~~~~~v~e~l~~l~-~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~~-----------~~ 187 (289)
T 3gyg_A 122 FSKEKVEKLVKQLH-ENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGV--SV-----------NI 187 (289)
T ss_dssp CCHHHHHHHHHHHH-HHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTE--EE-----------EE
T ss_pred CCHHHHHHHHHHHH-hhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCC--CE-----------EE
Confidence 46789999999999 77 9998888876 33444555555665 21 00
Q ss_pred eechhhhcCCHHHHHhhhccceEEEecCh--hhHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChH
Q 043517 644 IEASVFRSSSEETRSLMVDNVRVMANASP--LDKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQ 717 (956)
Q Consensus 644 i~g~~~~~~~~~~~~~~~~~~~v~ar~~p--~~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~ 717 (956)
......... .....+....| ..|...++.+.++ .+.++++||+.||.+|++.|++|++|+ ++.+
T Consensus 188 ~~~~~~~~~---------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~ 257 (289)
T 3gyg_A 188 NRCNPLAGD---------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQ 257 (289)
T ss_dssp EECCGGGTC---------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCH
T ss_pred EEccccccC---------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccH
Confidence 000000000 00002333333 3566666655543 357999999999999999999999999 8999
Q ss_pred HHHhcCCeeeccCChhHHHHHHHH
Q 043517 718 FARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 718 ~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
..++.||+++.+++.+++.++|++
T Consensus 258 ~~~~~a~~v~~~~~~~gv~~~~~~ 281 (289)
T 3gyg_A 258 EAKNLHNLITDSEYSKGITNTLKK 281 (289)
T ss_dssp HHHHHCCCBCSSCHHHHHHHHHHH
T ss_pred HHHHhCCEEcCCCCcCHHHHHHHH
Confidence 999999999999999999988864
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.33 E-value=1.2e-06 Score=91.13 Aligned_cols=125 Identities=14% Similarity=0.034 Sum_probs=83.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+... +..+.+++|+ ... -..++++...
T Consensus 92 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~~--~~~~l~~~gl--~~~--------f~~i~~~~~~---------------- 142 (233)
T 3nas_A 92 DLLPGIGRLLCQLK-NENIKIGLASSSRN--APKILRRLAI--IDD--------FHAIVDPTTL---------------- 142 (233)
T ss_dssp GSCTTHHHHHHHHH-HTTCEEEECCSCTT--HHHHHHHTTC--TTT--------CSEECCC-------------------
T ss_pred CcCcCHHHHHHHHH-HCCCcEEEEcCchh--HHHHHHHcCc--Hhh--------cCEEeeHhhC----------------
Confidence 36799999999999 99999999999754 7788899998 331 2223332211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
-...-.|+--..+.+.+.-..+.++++||+.||+.|.+.||++++|. ++.+..+ .||+++.+.+.-.+..+++.
T Consensus 143 ~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~~~~~~~~ 216 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLTLELLHEE 216 (233)
T ss_dssp ------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCCHHHHHHH
T ss_pred CCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCCHHHHHHH
Confidence 01122333345566666555678999999999999999999999998 6666666 89999986665555555543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.32 E-value=8.5e-07 Score=91.19 Aligned_cols=122 Identities=13% Similarity=0.110 Sum_probs=87.3
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.++ +.|++++++|+.....+..+.+++|+ ... ...++.+....
T Consensus 94 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~l~~~~~--~~~--------~~~~~~~~~~~--------------- 147 (226)
T 1te2_A 94 PLLPGVREAVALCK-EQGLLVGLASASPLHMLEKVLTMFDL--RDS--------FDALASAEKLP--------------- 147 (226)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHTTC--GGG--------CSEEEECTTSS---------------
T ss_pred CcCccHHHHHHHHH-HCCCcEEEEeCCcHHHHHHHHHhcCc--Hhh--------CcEEEeccccC---------------
Confidence 35688999999999 99999999999999888889999998 320 12222221110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEe----CCCChHHHHhcCCeeeccCChhHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSI----GERSAQFARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIam----g~~~~~~ak~~Ad~vl~~~~~~~i~~ 737 (956)
...-.|+-...+.+.+.-..+.++++||+.||.+|++.||++++| + ++.+..+..||+++. ++..+..
T Consensus 148 -~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~--~~~el~~ 219 (226)
T 1te2_A 148 -YSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLS--SLTELTA 219 (226)
T ss_dssp -CCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECS--CGGGCCH
T ss_pred -CCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEEC--CHHHHhH
Confidence 001123344555555554567899999999999999999999999 5 555566788999987 4444444
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.25 E-value=1.4e-06 Score=92.76 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=89.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ...- ...++++....
T Consensus 103 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~l~~~~~--~~~~-------~~~~~~~~~~~--------------- 157 (267)
T 1swv_A 103 SPINGVKEVIASLR-ERGIKIGSTTGYTREMMDIVAKEAAL--QGYK-------PDFLVTPDDVP--------------- 157 (267)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEBCSSCHHHHHHHHHHHHH--TTCC-------CSCCBCGGGSS---------------
T ss_pred ccCccHHHHHHHHH-HcCCeEEEEcCCCHHHHHHHHHHcCC--cccC-------hHheecCCccC---------------
Confidence 46789999999999 99999999999999888888888887 3210 01222222111
Q ss_pred EEEecChhhHHHHHHHHHhcC-CeEEEEcCCccCHHHhhhCC---ccEEeCCCC------------------------hH
Q 043517 666 VMANASPLDKLLMVQCLKQKG-EVVAVTGMSTRDAPSLKEAD---VGVSIGERS------------------------AQ 717 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g-~~v~~iGDG~ND~~al~~Ad---vGIamg~~~------------------------~~ 717 (956)
...-.|+--..+.+.+.-.. +.++++||+.||.+|++.|| +++++| ++ .+
T Consensus 158 -~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T 1swv_A 158 -AGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRN 235 (267)
T ss_dssp -CCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHH
Confidence 01123444455666665555 78999999999999999999 677777 44 33
Q ss_pred HHHhc-CCeeeccCChhHHHHHHHH
Q 043517 718 FARDC-SDIVILDENFTTIAANLKW 741 (956)
Q Consensus 718 ~ak~~-Ad~vl~~~~~~~i~~~i~~ 741 (956)
..+.. ||+++. ++..+..++..
T Consensus 236 ~~~~~~ad~v~~--~~~el~~~l~~ 258 (267)
T 1swv_A 236 RFVENGAHFTIE--TMQELESVMEH 258 (267)
T ss_dssp HHHHTTCSEEES--SGGGHHHHHHH
T ss_pred HHHhcCCceecc--CHHHHHHHHHH
Confidence 34444 999986 77788877754
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.24 E-value=8.8e-07 Score=91.00 Aligned_cols=124 Identities=19% Similarity=0.095 Sum_probs=82.6
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.+++.+.++.++ +.|+++.++|+..........+.+|+ ... ...++.+.....
T Consensus 90 ~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~--------------- 143 (225)
T 3d6j_A 90 LFPDTLPTLTHLK-KQGIRIGIISTKYRFRILSFLRNHMP--DDW--------FDIIIGGEDVTH--------------- 143 (225)
T ss_dssp ECTTHHHHHHHHH-HHTCEEEEECSSCHHHHHHHHHTSSC--TTC--------CSEEECGGGCSS---------------
T ss_pred cCcCHHHHHHHHH-HCCCeEEEEECCCHHHHHHHHHHcCc--hhh--------eeeeeehhhcCC---------------
Confidence 3588999999999 99999999999999999999999998 331 122222221100
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEe----CCCChHHHHhc-CCeeeccCChhHHHHHHH
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSI----GERSAQFARDC-SDIVILDENFTTIAANLK 740 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIam----g~~~~~~ak~~-Ad~vl~~~~~~~i~~~i~ 740 (956)
..-.|+-...+.+.+.-..+.++++||+.||.+|++.||++++| + ++.+..+.. ||+++. ++..+.+.++
T Consensus 144 -~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~--~~~el~~~l~ 218 (225)
T 3d6j_A 144 -HKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIS--TLGQLISVPE 218 (225)
T ss_dssp -CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEES--SGGGGC----
T ss_pred -CCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEEC--CHHHHHHhhh
Confidence 00112222344444443456799999999999999999999887 4 444445554 899987 5555555553
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.24 E-value=5.5e-06 Score=86.08 Aligned_cols=105 Identities=14% Similarity=0.113 Sum_probs=74.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
.++|++.+.++.|+ +.|+++.++||.....+..+++.+|+ +.-- .....+.+|. +. -.
T Consensus 92 ~~~~g~~~~l~~l~-~~g~~~~ivS~~~~~~~~~~~~~~g~--~~~~-----~~~~~~~~~~-~~-------------g~ 149 (232)
T 3fvv_A 92 SLTVQAVDVVRGHL-AAGDLCALVTATNSFVTAPIARAFGV--QHLI-----ATDPEYRDGR-YT-------------GR 149 (232)
T ss_dssp GCCHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHTTC--CEEE-----ECEEEEETTE-EE-------------EE
T ss_pred hcCHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHcCC--CEEE-----EcceEEECCE-Ee-------------ee
Confidence 47999999999999 99999999999999999999999999 4200 0000000000 00 00
Q ss_pred EE-EecChhhHHHHHHHHH-hcC------CeEEEEcCCccCHHHhhhCCccEEeC
Q 043517 666 VM-ANASPLDKLLMVQCLK-QKG------EVVAVTGMSTRDAPSLKEADVGVSIG 712 (956)
Q Consensus 666 v~-ar~~p~~K~~iv~~lq-~~g------~~v~~iGDG~ND~~al~~AdvGIamg 712 (956)
+. ....+..|.+.++.+. +.| +.++++||+.||.+|++.|++++++.
T Consensus 150 ~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 150 IEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp EESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred ecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 01 1123456766665543 334 68999999999999999999999996
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-06 Score=91.29 Aligned_cols=127 Identities=9% Similarity=0.077 Sum_probs=94.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ... -..++++....
T Consensus 99 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~--------------- 152 (233)
T 3umb_A 99 SAFPENVPVLRQLR-EMGLPLGILSNGNPQMLEIAVKSAGM--SGL--------FDHVLSVDAVR--------------- 152 (233)
T ss_dssp EECTTHHHHHHHHH-TTTCCEEEEESSCHHHHHHHHHTTTC--TTT--------CSEEEEGGGTT---------------
T ss_pred CCCCCHHHHHHHHH-hCCCcEEEEeCCCHHHHHHHHHHCCc--Hhh--------cCEEEEecccC---------------
Confidence 46789999999999 99999999999999999999999998 431 22233332211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEe----CCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSI----GERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIam----g~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
...-.|+--..+.+.+.-..+.++++||+.||+.|.+.|+++++| + ++.+..+..+|+++. ++..+.++++.
T Consensus 153 -~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 153 -LYKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp -CCTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred -CCCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 011123333445555554557899999999999999999999999 5 555566678999998 88888888765
Q ss_pred h
Q 043517 742 G 742 (956)
Q Consensus 742 g 742 (956)
.
T Consensus 229 ~ 229 (233)
T 3umb_A 229 R 229 (233)
T ss_dssp -
T ss_pred h
Confidence 4
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.18 E-value=2.2e-06 Score=88.80 Aligned_cols=129 Identities=16% Similarity=0.173 Sum_probs=86.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ +.|+++.++|+.....+..+.+++|+ ..+. . -..++. +. ....
T Consensus 86 ~~~~g~~~~l~~L~-~~g~~~~i~T~~~~~~~~~~l~~~gl--~~~~---~---f~~~~~---~~-----------~~~~ 142 (225)
T 1nnl_A 86 HLTPGIRELVSRLQ-ERNVQVFLISGGFRSIVEHVASKLNI--PATN---V---FANRLK---FY-----------FNGE 142 (225)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHHHTTC--CGGG---E---EEECEE---EC-----------TTSC
T ss_pred CCCccHHHHHHHHH-HCCCcEEEEeCChHHHHHHHHHHcCC--Cccc---E---EeeeEE---Ec-----------CCCc
Confidence 58899999999999 99999999999999999999999999 3200 0 000000 00 0000
Q ss_pred EEEec------ChhhHHHHHHHHHhc-C-CeEEEEcCCccCHHHhhhCCccEEeCCCC-hHHHHhcCCeeeccCChhHHH
Q 043517 666 VMANA------SPLDKLLMVQCLKQK-G-EVVAVTGMSTRDAPSLKEADVGVSIGERS-AQFARDCSDIVILDENFTTIA 736 (956)
Q Consensus 666 v~ar~------~p~~K~~iv~~lq~~-g-~~v~~iGDG~ND~~al~~AdvGIamg~~~-~~~ak~~Ad~vl~~~~~~~i~ 736 (956)
+.+.- .+..|.++++.+.++ | +.++++||+.||..+.+.||++|+++... .+.....+|+++. ++..+.
T Consensus 143 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~ 220 (225)
T 1nnl_A 143 YAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELL 220 (225)
T ss_dssp EEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGC
T ss_pred EecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHH
Confidence 11111 123566666655443 4 67999999999999999999999887322 2334556899887 666665
Q ss_pred HHH
Q 043517 737 ANL 739 (956)
Q Consensus 737 ~~i 739 (956)
+++
T Consensus 221 ~~l 223 (225)
T 1nnl_A 221 GEL 223 (225)
T ss_dssp C--
T ss_pred HHH
Confidence 544
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.18 E-value=4.7e-06 Score=86.32 Aligned_cols=125 Identities=13% Similarity=0.107 Sum_probs=91.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +. +++.++|+.....+....+.+|+ ... -..++++....
T Consensus 100 ~~~~~~~~~l~~l~-~~-~~~~i~t~~~~~~~~~~l~~~~~-~~~---------f~~~~~~~~~~--------------- 152 (234)
T 3u26_A 100 ELYPEVVEVLKSLK-GK-YHVGMITDSDTEQAMAFLDALGI-KDL---------FDSITTSEEAG--------------- 152 (234)
T ss_dssp CBCTTHHHHHHHHT-TT-SEEEEEESSCHHHHHHHHHHTTC-GGG---------CSEEEEHHHHT---------------
T ss_pred CcCcCHHHHHHHHH-hC-CcEEEEECCCHHHHHHHHHHcCc-HHH---------cceeEeccccC---------------
Confidence 46689999999999 88 99999999999999999999998 222 12233322211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCC---ccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEAD---VGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~Ad---vGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
...-.|+--..+.+.+.-..+.++++||+. ||+.|.+.|| +++++| ++.+..+..||+++. ++..+.++++.
T Consensus 153 -~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~~l~~ 228 (234)
T 3u26_A 153 -FFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIKIVDE 228 (234)
T ss_dssp -BCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHHHHHH
T ss_pred -CCCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHHHHHH
Confidence 011123333445555554457899999997 9999999999 677778 677777779999998 77788877653
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.15 E-value=3.4e-06 Score=87.26 Aligned_cols=124 Identities=13% Similarity=0.014 Sum_probs=86.2
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCC---HHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhcc
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDD---INIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDN 663 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~---~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 663 (956)
+.+++.+.++.|+ +.|+++.++|+.. ........+.+|+ ... -..++.+.+...
T Consensus 100 ~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~~------------ 156 (235)
T 2om6_A 100 VLEGTKEALQFVK-ERGLKTAVIGNVMFWPGSYTRLLLERFGL--MEF--------IDKTFFADEVLS------------ 156 (235)
T ss_dssp BCTTHHHHHHHHH-HTTCEEEEEECCCSSCHHHHHHHHHHTTC--GGG--------CSEEEEHHHHTC------------
T ss_pred cCccHHHHHHHHH-HCCCEEEEEcCCcccchhHHHHHHHhCCc--HHH--------hhhheeccccCC------------
Confidence 4789999999999 9999999999999 8888888999998 320 123333322211
Q ss_pred ceEEEecChhhHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCccEEe---CCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 664 VRVMANASPLDKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEADVGVSI---GERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 664 ~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIam---g~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
..-.|+--..+.+.+.-..+.++++||+. ||..|.+.||++++| | ++.+..+..+|+++. ++..+.+++
T Consensus 157 ----~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~--~~~el~~~l 229 (235)
T 2om6_A 157 ----YKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEIP--SIANLKDVI 229 (235)
T ss_dssp ----CTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEES--SGGGHHHHH
T ss_pred ----CCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchHh--hHHHHHHHH
Confidence 01122222334444433357899999999 999999999999998 5 333334456788876 677777766
Q ss_pred H
Q 043517 740 K 740 (956)
Q Consensus 740 ~ 740 (956)
+
T Consensus 230 ~ 230 (235)
T 2om6_A 230 E 230 (235)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.9e-06 Score=90.14 Aligned_cols=125 Identities=14% Similarity=0.045 Sum_probs=87.3
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ... -..++.+....
T Consensus 110 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~--------------- 163 (240)
T 3sd7_A 110 KIYENMKEILEMLY-KNGKILLVATSKPTVFAETILRYFDI--DRY--------FKYIAGSNLDG--------------- 163 (240)
T ss_dssp EECTTHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHHHTTC--GGG--------CSEEEEECTTS---------------
T ss_pred ccCccHHHHHHHHH-HCCCeEEEEeCCcHHHHHHHHHHcCc--Hhh--------EEEEEeccccC---------------
Confidence 46799999999999 99999999999999999999999999 320 11222221110
Q ss_pred EEEecChhhHHHHHHHHHhc-CCeEEEEcCCccCHHHhhhCCc---cEEeCCCChHH-HHhcCCeeeccCChhHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQK-GEVVAVTGMSTRDAPSLKEADV---GVSIGERSAQF-ARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~-g~~v~~iGDG~ND~~al~~Adv---GIamg~~~~~~-ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+--..+.+.+.-. .+.++++||+.||+.|.+.||+ ++++|....+. .+..||+++. ++..+.++|
T Consensus 164 -~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 164 -TRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp -CCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred -CCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 0001222234445555545 6789999999999999999999 77777333333 3578999988 666666654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.14 E-value=2e-06 Score=88.86 Aligned_cols=125 Identities=19% Similarity=0.179 Sum_probs=90.2
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
-++.|++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ... -..++++....
T Consensus 95 ~~~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~~~l~~~~l-~~~---------f~~~~~~~~~~-------------- 149 (230)
T 3um9_A 95 LTPFADVPQALQQLR-AAGLKTAILSNGSRHSIRQVVGNSGL-TNS---------FDHLISVDEVR-------------- 149 (230)
T ss_dssp CCBCTTHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHHTC-GGG---------CSEEEEGGGTT--------------
T ss_pred CCCCCCHHHHHHHHH-hCCCeEEEEeCCCHHHHHHHHHHCCC-hhh---------cceeEehhhcc--------------
Confidence 357799999999999 99999999999999999999999998 222 12223322111
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEe----CCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSI----GERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIam----g~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+--..+.+.+.-..+.++++||+.||+.|.+.|+++++| + ++.+..+..+|+++. ++..+.+++
T Consensus 150 --~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~el~~~l 223 (230)
T 3um9_A 150 --LFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSN-GVFDQLGVVPDIVVS--DVGVLASRF 223 (230)
T ss_dssp --CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTS-CCCCCSSCCCSEEES--SHHHHHHTC
T ss_pred --cCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCC-CccccccCCCcEEeC--CHHHHHHHH
Confidence 011123333445555544457899999999999999999999998 4 444555678999988 777776654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.12 E-value=2.3e-06 Score=86.40 Aligned_cols=118 Identities=11% Similarity=0.114 Sum_probs=84.2
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.+++.+.++.++ +.|+++.++|+....... ..+.+|+ ... ...++.+....
T Consensus 86 ~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~-~~~~~~~--~~~--------f~~~~~~~~~~---------------- 137 (207)
T 2go7_A 86 LMPGAREVLAWAD-ESGIQQFIYTHKGNNAFT-ILKDLGV--ESY--------FTEILTSQSGF---------------- 137 (207)
T ss_dssp ECTTHHHHHHHHH-HTTCEEEEECSSCTHHHH-HHHHHTC--GGG--------EEEEECGGGCC----------------
T ss_pred eCcCHHHHHHHHH-HCCCeEEEEeCCchHHHH-HHHHcCc--hhh--------eeeEEecCcCC----------------
Confidence 5789999999999 999999999999988888 8888898 320 12222222110
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+--..+.+.++-..+.++++||+.||.+|++.||++ ++|+ ++. . .||+++. ++..+.+++
T Consensus 138 ~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 138 VRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECS--STTHHHHHT
T ss_pred CCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeC--CHHHHHHHH
Confidence 001123333455566655567899999999999999999998 8888 665 2 6899886 566666554
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1.9e-06 Score=92.76 Aligned_cols=128 Identities=11% Similarity=-0.029 Sum_probs=88.1
Q ss_pred cCcHHHHHHHHHHHhhCCC--EEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhcc
Q 043517 586 AYASEVKQAIEDCRESAGI--KIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDN 663 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi--~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 663 (956)
++.|++.+.++.|+ +.|+ ++.++|+.....+..+.+.+|+ ... -..++++......
T Consensus 142 ~~~p~~~~~L~~L~-~~g~~~~l~i~Tn~~~~~~~~~l~~~gl--~~~--------fd~v~~~~~~~~~----------- 199 (282)
T 3nuq_A 142 KPDIPLRNMLLRLR-QSGKIDKLWLFTNAYKNHAIRCLRLLGI--ADL--------FDGLTYCDYSRTD----------- 199 (282)
T ss_dssp CCCHHHHHHHHHHH-HSSSCSEEEEECSSCHHHHHHHHHHHTC--TTS--------CSEEECCCCSSCS-----------
T ss_pred CcChhHHHHHHHHH-hCCCCceEEEEECCChHHHHHHHHhCCc--ccc--------cceEEEeccCCCc-----------
Confidence 57799999999999 9999 9999999999999999999999 431 1222222111000
Q ss_pred ceEEEecChhhHHHHHHHHHhcC-CeEEEEcCCccCHHHhhhCCccEEeCCCChHHH------HhcCCeeeccCChhHHH
Q 043517 664 VRVMANASPLDKLLMVQCLKQKG-EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFA------RDCSDIVILDENFTTIA 736 (956)
Q Consensus 664 ~~v~ar~~p~~K~~iv~~lq~~g-~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~a------k~~Ad~vl~~~~~~~i~ 736 (956)
.....-.|+--..+.+.+.-.. +.++++||+.||..|.+.||+|.+|+ ++.+.. ...||+++. ++..+.
T Consensus 200 -~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~ad~vi~--sl~el~ 275 (282)
T 3nuq_A 200 -TLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIH-LVENEVNEILGQTPEGAIVIS--DILELP 275 (282)
T ss_dssp -SCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE-ECSCCC----CCCCTTCEEES--SGGGGG
T ss_pred -ccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE-EcCCccccccccCCCCCEEeC--CHHHHH
Confidence 0011122333344455555455 78999999999999999999999987 443322 236889887 676666
Q ss_pred HHH
Q 043517 737 ANL 739 (956)
Q Consensus 737 ~~i 739 (956)
+++
T Consensus 276 ~~l 278 (282)
T 3nuq_A 276 HVV 278 (282)
T ss_dssp GTS
T ss_pred HHh
Confidence 554
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.09 E-value=2e-06 Score=87.40 Aligned_cols=122 Identities=14% Similarity=0.085 Sum_probs=87.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ... -..++.+....
T Consensus 89 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~~~l~~~~l-~~~---------f~~~~~~~~~~--------------- 142 (214)
T 3e58_A 89 LIFPDVLKVLNEVK-SQGLEIGLASSSVKADIFRALEENRL-QGF---------FDIVLSGEEFK--------------- 142 (214)
T ss_dssp HBCTTHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHTTC-GGG---------CSEEEEGGGCS---------------
T ss_pred CcCchHHHHHHHHH-HCCCCEEEEeCCcHHHHHHHHHHcCc-Hhh---------eeeEeeccccc---------------
Confidence 46789999999999 99999999999999999999999999 322 22333332211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCC-hHHHHhcCCeeeccCChhHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERS-AQFARDCSDIVILDENFTTIA 736 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~-~~~ak~~Ad~vl~~~~~~~i~ 736 (956)
...-.|+--..+.+.+.-..+.++++||+.||..|.+.||+++++..++ .+..+..||+++. ++..+.
T Consensus 143 -~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~ 211 (214)
T 3e58_A 143 -ESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL 211 (214)
T ss_dssp -SCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred -CCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence 0111334445556666555678999999999999999999998876332 3334467899887 555443
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.08 E-value=5.7e-06 Score=85.71 Aligned_cols=122 Identities=15% Similarity=0.092 Sum_probs=85.2
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ... -..++.+....
T Consensus 103 ~~~~~~~~~l~~l~-~~g~~~~i~T~~~~~~~~~~l~~~gl--~~~--------f~~i~~~~~~~--------------- 156 (231)
T 3kzx_A 103 MLNDGAIELLDTLK-ENNITMAIVSNKNGERLRSEIHHKNL--THY--------FDSIIGSGDTG--------------- 156 (231)
T ss_dssp EECTTHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHHHTTC--GGG--------CSEEEEETSSS---------------
T ss_pred eECcCHHHHHHHHH-HCCCeEEEEECCCHHHHHHHHHHCCc--hhh--------eeeEEcccccC---------------
Confidence 36789999999999 99999999999999999999999998 320 12222221110
Q ss_pred EEEecChhhHHHHHHHHHhcCC-eEEEEcCCccCHHHhhhCCc-cEEeCCCChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGE-VVAVTGMSTRDAPSLKEADV-GVSIGERSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~-~v~~iGDG~ND~~al~~Adv-GIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
...-.|+--..+.+.+.-..+ .++++||+.||+.|.+.||+ +|.++ ++.+ ..+++++. ++..+.+++.
T Consensus 157 -~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 157 -TIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp -CCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHHHH
T ss_pred -CCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHHHH
Confidence 011123333555555555556 89999999999999999997 67777 5544 35777776 7888877764
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.08 E-value=2.3e-06 Score=90.00 Aligned_cols=122 Identities=13% Similarity=0.158 Sum_probs=86.2
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+.+++|+ ... -..++++.....
T Consensus 114 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~l~~~gl--~~~--------f~~~~~~~~~~~-------------- 168 (243)
T 2hsz_A 114 RLYPNVKETLEALK-AQGYILAVVTNKPTKHVQPILTAFGI--DHL--------FSEMLGGQSLPE-------------- 168 (243)
T ss_dssp EECTTHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHHTTC--GGG--------CSEEECTTTSSS--------------
T ss_pred ccCCCHHHHHHHHH-HCCCEEEEEECCcHHHHHHHHHHcCc--hhe--------EEEEEecccCCC--------------
Confidence 46789999999999 99999999999999999999999998 320 123333322110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE-eCCC----ChHHHHhcCCeeeccCChhHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS-IGER----SAQFARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-mg~~----~~~~ak~~Ad~vl~~~~~~~i~~ 737 (956)
..-.|+-...+.+.+.-..+.++++||+.||++|.+.||++++ +. . +.+..+..||+++. ++..+.+
T Consensus 169 --~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~ad~vi~--~~~el~~ 240 (243)
T 2hsz_A 169 --IKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLT-YGYNYNIPIAQSKPDWIFD--DFADILK 240 (243)
T ss_dssp --CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-SSCSTTCCGGGGCCSEEES--SGGGGGG
T ss_pred --CCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEc-CCCCchhhhhhCCCCEEEC--CHHHHHH
Confidence 0112444455666665556789999999999999999999844 33 2 23345677999886 5555543
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.08 E-value=4.3e-06 Score=83.35 Aligned_cols=125 Identities=14% Similarity=0.009 Sum_probs=84.2
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCH---------------HHHHHHHHhcC--CcccCCCCCCCCCCccee-eec-
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDI---------------NIARLIAINSG--LILKPGAEDHSNGYDAAV-IEA- 646 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~---------------~ta~~ia~~~G--i~~~~~~~~~~~~~~~~~-i~g- 646 (956)
++.|++.+++++|+ +.|+++.++|+... ..+..+.+++| + +. .-.+ ..+
T Consensus 27 ~~~~g~~~~l~~L~-~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~--~~---------~~~~~~~~~ 94 (179)
T 3l8h_A 27 IALPGSLQAIARLT-QADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVV--DA---------IFMCPHGPD 94 (179)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCC--CE---------EEEECCCTT
T ss_pred eECcCHHHHHHHHH-HCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCce--eE---------EEEcCCCCC
Confidence 47799999999999 99999999999986 55667777788 5 32 0000 000
Q ss_pred hhhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc---cEEeCCCChHHHH---
Q 043517 647 SVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV---GVSIGERSAQFAR--- 720 (956)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv---GIamg~~~~~~ak--- 720 (956)
... -...-.|+--..+.+.+.-..+.++|+||+.||..|.+.|++ +++.| .+.....
T Consensus 95 ~~~----------------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~ 157 (179)
T 3l8h_A 95 DGC----------------ACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGG 157 (179)
T ss_dssp SCC----------------SSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCC
T ss_pred CCC----------------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-Ccchhhhhcc
Confidence 000 000112233344555555556789999999999999999995 67777 5554443
Q ss_pred -hcCCeeeccCChhHHHHHHHH
Q 043517 721 -DCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 721 -~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
..+|+++. ++..+.+.+..
T Consensus 158 ~~~~d~v~~--~l~el~~~l~~ 177 (179)
T 3l8h_A 158 LPEGTRVCE--DLAAVAEQLLQ 177 (179)
T ss_dssp CCTTEEEES--SHHHHHHHHHH
T ss_pred cCCCcEEec--CHHHHHHHHHh
Confidence 45799988 78888877643
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.05 E-value=2.9e-06 Score=87.84 Aligned_cols=127 Identities=14% Similarity=0.093 Sum_probs=89.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ +.|+++.++|+.....+..+.+.+|+ ... -..++++.+..
T Consensus 83 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~~~l~~~gl--~~~--------f~~i~~~~~~~--------------- 136 (222)
T 2nyv_A 83 KPYPEIPYTLEALK-SKGFKLAVVSNKLEELSKKILDILNL--SGY--------FDLIVGGDTFG--------------- 136 (222)
T ss_dssp EECTTHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHHTTC--GGG--------CSEEECTTSSC---------------
T ss_pred ccCCCHHHHHHHHH-HCCCeEEEEcCCCHHHHHHHHHHcCC--HHH--------heEEEecCcCC---------------
Confidence 46799999999999 99999999999999999999999998 320 12233322110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCC-CChHHHHhcCCeeeccCChhHHHHHHHHh
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGE-RSAQFARDCSDIVILDENFTTIAANLKWG 742 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~-~~~~~ak~~Ad~vl~~~~~~~i~~~i~~g 742 (956)
...-.|+-...+.+.+.-..+.++++||+.||++|.+.||+. |++.. .+.... ..+|+++. ++..+.+.+...
T Consensus 137 -~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~~~ 211 (222)
T 2nyv_A 137 -EKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMDNH 211 (222)
T ss_dssp -TTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHHTT
T ss_pred -CCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHHHh
Confidence 011234444556666655567899999999999999999988 66541 222222 56888887 778888777653
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.03 E-value=9.7e-06 Score=83.91 Aligned_cols=121 Identities=12% Similarity=0.023 Sum_probs=79.9
Q ss_pred CcHHHHHHHHHHHhhC-CCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 587 YASEVKQAIEDCRESA-GIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~-Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+.|++.+.++.|+ +. |+++.++|+.....+....+.+|+ ..- -..++.+.+..
T Consensus 94 ~~~~~~~~l~~l~-~~~g~~~~i~t~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~--------------- 147 (234)
T 2hcf_A 94 LLEGVRELLDALS-SRSDVLLGLLTGNFEASGRHKLKLPGI--DHY--------FPFGAFADDAL--------------- 147 (234)
T ss_dssp ECTTHHHHHHHHH-TCTTEEEEEECSSCHHHHHHHHHTTTC--STT--------CSCEECTTTCS---------------
T ss_pred cCCCHHHHHHHHH-hCCCceEEEEcCCcHHHHHHHHHHCCc--hhh--------cCcceecCCCc---------------
Confidence 5689999999999 99 999999999999999999999998 431 11122222110
Q ss_pred EEEecChhhHH----HHHHHHH--hcCCeEEEEcCCccCHHHhhhCC---ccEEeCCCChH-HHHh-cCCeeeccCChhH
Q 043517 666 VMANASPLDKL----LMVQCLK--QKGEVVAVTGMSTRDAPSLKEAD---VGVSIGERSAQ-FARD-CSDIVILDENFTT 734 (956)
Q Consensus 666 v~ar~~p~~K~----~iv~~lq--~~g~~v~~iGDG~ND~~al~~Ad---vGIamg~~~~~-~ak~-~Ad~vl~~~~~~~ 734 (956)
..+.-+. .+.+.+. -..+.++++||+.||.+|.+.|| +++++| ++.. ..+. .||+++. ++..
T Consensus 148 ----~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~--~~~e 220 (234)
T 2hcf_A 148 ----DRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFK--NFAE 220 (234)
T ss_dssp ----SGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEES--CSCC
T ss_pred ----CccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeC--CHHh
Confidence 0111122 2333333 23468999999999999999999 555555 3333 3322 3899887 4445
Q ss_pred HHHHHH
Q 043517 735 IAANLK 740 (956)
Q Consensus 735 i~~~i~ 740 (956)
+.+.++
T Consensus 221 l~~~l~ 226 (234)
T 2hcf_A 221 TDEVLA 226 (234)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.02 E-value=8.5e-06 Score=86.74 Aligned_cols=128 Identities=14% Similarity=-0.008 Sum_probs=89.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ .... ...++++....
T Consensus 111 ~~~~~~~~~l~~l~-~~g~~~~i~tn~~~~~~~~~l~~~~~--~~~~-------~~~~~~~~~~~--------------- 165 (277)
T 3iru_A 111 QLIPGWKEVFDKLI-AQGIKVGGNTGYGPGMMAPALIAAKE--QGYT-------PASTVFATDVV--------------- 165 (277)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHHHHH--TTCC-------CSEEECGGGSS---------------
T ss_pred ccCcCHHHHHHHHH-HcCCeEEEEeCCchHHHHHHHHhcCc--ccCC-------CceEecHHhcC---------------
Confidence 46789999999999 99999999999999999999998887 3210 12233322211
Q ss_pred EEEecChhhHHHHHHHHHhcC-CeEEEEcCCccCHHHhhhCC---ccEEeCCC-----------------------ChHH
Q 043517 666 VMANASPLDKLLMVQCLKQKG-EVVAVTGMSTRDAPSLKEAD---VGVSIGER-----------------------SAQF 718 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g-~~v~~iGDG~ND~~al~~Ad---vGIamg~~-----------------------~~~~ 718 (956)
...-.|+--..+.+.+.-.. +.++++||+.||+.|.+.|| ++|++|.+ +.+.
T Consensus 166 -~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (277)
T 3iru_A 166 -RGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQR 244 (277)
T ss_dssp -SCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHH
Confidence 01112333455566665556 88999999999999999999 56777632 1233
Q ss_pred HH-hcCCeeeccCChhHHHHHHHH
Q 043517 719 AR-DCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 719 ak-~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.+ ..||+++. ++..+.++++.
T Consensus 245 l~~~~ad~v~~--~~~el~~~l~~ 266 (277)
T 3iru_A 245 LFNAGAHYVID--SVADLETVITD 266 (277)
T ss_dssp HHHHTCSEEES--SGGGTHHHHHH
T ss_pred HhhCCCCEEec--CHHHHHHHHHH
Confidence 33 34999998 77778877754
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.99 E-value=4.7e-06 Score=86.43 Aligned_cols=126 Identities=11% Similarity=0.098 Sum_probs=87.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ... -..++.+....
T Consensus 95 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~l~~~~l-~~~---------f~~~~~~~~~~--------------- 148 (232)
T 1zrn_A 95 APFSEVPDSLRELK-RRGLKLAILSNGSPQSIDAVVSHAGL-RDG---------FDHLLSVDPVQ--------------- 148 (232)
T ss_dssp EECTTHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHTTC-GGG---------CSEEEESGGGT---------------
T ss_pred CCCccHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHhcCh-Hhh---------hheEEEecccC---------------
Confidence 46799999999999 99999999999999999999999998 222 12233322211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCC---CChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGE---RSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~---~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
...-.|+-...+.+.+.-..+.++++||+.||..|.+.||+++++-. +..+..+..+|+++. ++..+...+.
T Consensus 149 -~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 223 (232)
T 1zrn_A 149 -VYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELFE 223 (232)
T ss_dssp -CCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC-
T ss_pred -CCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 01123333445555555445689999999999999999999988831 222333456888886 6776665543
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.97 E-value=9.4e-06 Score=91.20 Aligned_cols=110 Identities=17% Similarity=0.168 Sum_probs=74.7
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhcc
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDN 663 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 663 (956)
.-.++|++++.|+.|+ +.|++|+|+||.....++.+|+++|+ ..+-+ ...+ -|..+....+
T Consensus 219 gir~~p~~~eLi~~L~-~~G~~v~IVSgg~~~~v~~ia~~lg~--~y~ip------~~~V-ig~~l~~~~d--------- 279 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLE-ENGIDCYIVSASFIDIVRAFATDTNN--NYKMK------EEKV-LGLRLMKDDE--------- 279 (385)
T ss_dssp CCEECHHHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHHCTTS--SCCCC------GGGE-EEECEEECTT---------
T ss_pred CceeCHHHHHHHHHHH-HCCCeEEEEcCCcHHHHHHHHHHhCc--ccCCC------cceE-EEeEEEEecC---------
Confidence 3457899999999999 99999999999999999999999987 32110 0111 1222211000
Q ss_pred ceEEEe-------cChhhHHHHHHHHHhc--C-CeEEEEcCCccCHHHhhh-CCccEEeC
Q 043517 664 VRVMAN-------ASPLDKLLMVQCLKQK--G-EVVAVTGMSTRDAPSLKE-ADVGVSIG 712 (956)
Q Consensus 664 ~~v~ar-------~~p~~K~~iv~~lq~~--g-~~v~~iGDG~ND~~al~~-AdvGIamg 712 (956)
-.+-.+ +..+.|.+.++.+-+. | ..++++|||.||.+||+. +|.++++.
T Consensus 280 G~~tg~~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~li 339 (385)
T 4gxt_A 280 GKILPKFDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLI 339 (385)
T ss_dssp CCEEEEECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEE
T ss_pred CceeeeecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEE
Confidence 001122 3456799888876433 2 358889999999999986 56666553
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.95 E-value=7e-06 Score=85.94 Aligned_cols=124 Identities=8% Similarity=0.052 Sum_probs=85.2
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCc--ceeeechhhhcCCHHHHHhhhcc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYD--AAVIEASVFRSSSEETRSLMVDN 663 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~ 663 (956)
++.+++.+.++.|+ +.|+++.++|+.....+....+. |+ ... - ..++++....
T Consensus 109 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~l~~-~l--~~~--------f~~d~i~~~~~~~------------- 163 (243)
T 3qxg_A 109 ERMPGAWELLQKVK-SEGLTPMVVTGSGQLSLLERLEH-NF--PGM--------FHKELMVTAFDVK------------- 163 (243)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEECCCCCHHHHTTHHH-HS--TTT--------CCGGGEECTTTCS-------------
T ss_pred CCCCCHHHHHHHHH-HcCCcEEEEeCCcHHHHHHHHHH-hH--HHh--------cCcceEEeHHhCC-------------
Confidence 46799999999999 99999999999988777777777 88 321 1 2233332211
Q ss_pred ceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCCCChH----HHHhcCCeeeccCChhHHHHH
Q 043517 664 VRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGERSAQ----FARDCSDIVILDENFTTIAAN 738 (956)
Q Consensus 664 ~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~~~----~ak~~Ad~vl~~~~~~~i~~~ 738 (956)
...-.|+--..+.+.+.-..+.++++||+.||+.|.+.|+++ |.+. ++.. ..+..||+++. ++..+.++
T Consensus 164 ---~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~el~~~ 237 (243)
T 3qxg_A 164 ---YGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQTLCDS 237 (243)
T ss_dssp ---SCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHHHHHH
T ss_pred ---CCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHHHHHH
Confidence 011233333444455444457899999999999999999995 4454 4432 22346999987 78888777
Q ss_pred HH
Q 043517 739 LK 740 (956)
Q Consensus 739 i~ 740 (956)
++
T Consensus 238 l~ 239 (243)
T 3qxg_A 238 WD 239 (243)
T ss_dssp HH
T ss_pred HH
Confidence 65
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.95 E-value=8e-06 Score=86.38 Aligned_cols=128 Identities=15% Similarity=0.042 Sum_probs=89.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcce-eeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAA-VIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
++.+++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ..- -.. ++++....
T Consensus 110 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~~~l~~~~l--~~~--------f~~~i~~~~~~~-------------- 164 (259)
T 4eek_A 110 TAIEGAAETLRALR-AAGVPFAIGSNSERGRLHLKLRVAGL--TEL--------AGEHIYDPSWVG-------------- 164 (259)
T ss_dssp EECTTHHHHHHHHH-HHTCCEEEECSSCHHHHHHHHHHTTC--HHH--------HCSCEECGGGGT--------------
T ss_pred CcCccHHHHHHHHH-HCCCeEEEEeCCCHHHHHHHHHhcCh--Hhh--------ccceEEeHhhcC--------------
Confidence 45689999999999 99999999999999999999999998 320 111 23222211
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCCCC-------hHH-HHhcCCeeeccCChhHH
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGERS-------AQF-ARDCSDIVILDENFTTI 735 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~-------~~~-ak~~Ad~vl~~~~~~~i 735 (956)
....-.|+--..+.+.+.-..+.++++||+.||+.|.+.||++ +.+. .+ .+. .+..||+++. ++..+
T Consensus 165 -~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~--~l~el 240 (259)
T 4eek_A 165 -GRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLT--SHAEL 240 (259)
T ss_dssp -TCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEEC--SHHHH
T ss_pred -cCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhC--CHHHH
Confidence 0111123333444455444457899999999999999999998 4454 33 223 3345999998 88899
Q ss_pred HHHHHHh
Q 043517 736 AANLKWG 742 (956)
Q Consensus 736 ~~~i~~g 742 (956)
.++++..
T Consensus 241 ~~~l~~~ 247 (259)
T 4eek_A 241 RAALAEA 247 (259)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 8888764
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=1.1e-05 Score=84.34 Aligned_cols=124 Identities=10% Similarity=0.050 Sum_probs=85.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ..- ...++++....
T Consensus 105 ~~~~~~~~~l~~l~-~~g~~~~i~s~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~--------------- 158 (240)
T 2no4_A 105 SAYPDAAETLEKLK-SAGYIVAILSNGNDEMLQAALKASKL--DRV--------LDSCLSADDLK--------------- 158 (240)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHTTC--GGG--------CSEEEEGGGTT---------------
T ss_pred CCCCCHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHhcCc--HHH--------cCEEEEccccC---------------
Confidence 57799999999999 99999999999999999999999998 320 12233332211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE---eCCCChHHHHhcC-CeeeccCChhHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS---IGERSAQFARDCS-DIVILDENFTTIAANL 739 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa---mg~~~~~~ak~~A-d~vl~~~~~~~i~~~i 739 (956)
...-.|+-...+.+.+.-..+.++++||+.||+.|.+.||+..+ .| ++.+..+..+ |+++. ++..+..++
T Consensus 159 -~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 159 -IYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp -CCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred -CCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeC--CHHHHHHHH
Confidence 01113333344555555445789999999999999999996544 34 3322234456 88886 677777665
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.93 E-value=1e-05 Score=84.52 Aligned_cols=126 Identities=7% Similarity=0.022 Sum_probs=84.5
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCc--ceeeechhhhcCCHHHHHhhhc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYD--AAVIEASVFRSSSEETRSLMVD 662 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~ 662 (956)
.++.|++.+.++.|+ +.|+++.++|+.....+....+. |+ ..- - ..++++....
T Consensus 107 ~~~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~l~~-~l--~~~--------f~~~~~~~~~~~~------------ 162 (247)
T 3dv9_A 107 AERMPGALEVLTKIK-SEGLTPMVVTGSGQTSLLDRLNH-NF--PGI--------FQANLMVTAFDVK------------ 162 (247)
T ss_dssp CCBCTTHHHHHHHHH-HTTCEEEEECSCC---CHHHHHH-HS--TTT--------CCGGGEECGGGCS------------
T ss_pred CCCCCCHHHHHHHHH-HcCCcEEEEcCCchHHHHHHHHh-hH--HHh--------cCCCeEEecccCC------------
Confidence 356799999999999 99999999999988877777777 88 320 1 2233332211
Q ss_pred cceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCCCChH----HHHhcCCeeeccCChhHHHH
Q 043517 663 NVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGERSAQ----FARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 663 ~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~~~----~ak~~Ad~vl~~~~~~~i~~ 737 (956)
...-.|+--..+.+.+.-..+.++++||+.||+.|.+.||++ +.+. ++.. ..+..||+++. ++..+.+
T Consensus 163 ----~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--~~~el~~ 235 (247)
T 3dv9_A 163 ----YGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFH--SMPDFNK 235 (247)
T ss_dssp ----SCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEES--SHHHHHH
T ss_pred ----CCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEEC--CHHHHHH
Confidence 111233444555666655567899999999999999999975 3443 3322 22347999988 7777777
Q ss_pred HHHH
Q 043517 738 NLKW 741 (956)
Q Consensus 738 ~i~~ 741 (956)
+++.
T Consensus 236 ~l~~ 239 (247)
T 3dv9_A 236 NWET 239 (247)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.92 E-value=4.3e-05 Score=79.75 Aligned_cols=126 Identities=13% Similarity=0.073 Sum_probs=86.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.....+..+.+.+|+ ... -..++++....
T Consensus 94 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~--------------- 147 (241)
T 2hoq_A 94 REVPGARKVLIRLK-ELGYELGIITDGNPVKQWEKILRLEL--DDF--------FEHVIISDFEG--------------- 147 (241)
T ss_dssp CBCTTHHHHHHHHH-HHTCEEEEEECSCHHHHHHHHHHTTC--GGG--------CSEEEEGGGGT---------------
T ss_pred CCCccHHHHHHHHH-HCCCEEEEEECCCchhHHHHHHHcCc--Hhh--------ccEEEEeCCCC---------------
Confidence 36789999999999 99999999999999888999999998 420 12233332211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCccEEe---CCCChHHHH---hcCCeeeccCChhHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEADVGVSI---GERSAQFAR---DCSDIVILDENFTTIAAN 738 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIam---g~~~~~~ak---~~Ad~vl~~~~~~~i~~~ 738 (956)
...-.|+--..+.+.+.-..+.++++||+. ||..|.+.||++.+. | .+..... ..+|+++. ++..+...
T Consensus 148 -~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~--~~~el~~~ 223 (241)
T 2hoq_A 148 -VKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEID--NLESLLEV 223 (241)
T ss_dssp -CCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEES--STTHHHHH
T ss_pred -CCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEEC--CHHHHHHH
Confidence 011122322344444544457899999998 999999999998654 3 3333333 26899887 67777776
Q ss_pred HHH
Q 043517 739 LKW 741 (956)
Q Consensus 739 i~~ 741 (956)
+..
T Consensus 224 l~~ 226 (241)
T 2hoq_A 224 LAR 226 (241)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.89 E-value=8e-06 Score=85.41 Aligned_cols=138 Identities=10% Similarity=0.030 Sum_probs=90.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc-
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV- 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~- 664 (956)
+++|++.++++.|+ ++|+++.++|+.....+..+.+ |+ .. ...++.+.....- ..+.....+.
T Consensus 77 ~~~pg~~~~l~~L~-~~g~~~~ivS~~~~~~~~~~l~--~l--~~---------~~~v~~~~~~~~~--~~~~~~~~kp~ 140 (236)
T 2fea_A 77 KIREGFREFVAFIN-EHEIPFYVISGGMDFFVYPLLE--GI--VE---------KDRIYCNHASFDN--DYIHIDWPHSC 140 (236)
T ss_dssp CBCTTHHHHHHHHH-HHTCCEEEEEEEEHHHHHHHHT--TT--SC---------GGGEEEEEEECSS--SBCEEECTTCC
T ss_pred CCCccHHHHHHHHH-hCCCeEEEEeCCcHHHHHHHHh--cC--CC---------CCeEEeeeeEEcC--CceEEecCCCC
Confidence 57899999999999 9999999999999988888888 77 32 1122222211100 0000000000
Q ss_pred -eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhc--CCeeeccCChhHHHHHHHH
Q 043517 665 -RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDC--SDIVILDENFTTIAANLKW 741 (956)
Q Consensus 665 -~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~--Ad~vl~~~~~~~i~~~i~~ 741 (956)
..+.+.....|.++++.+....+.++++||+.||+++.+.||+.++.. ...+..+.. +|+++. ++..+.+++..
T Consensus 141 p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l~~ 217 (236)
T 2fea_A 141 KGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEIEN 217 (236)
T ss_dssp CTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHHHT
T ss_pred ccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHHHH
Confidence 000111244688888888777889999999999999999999998753 222233333 677775 78888877755
Q ss_pred h
Q 043517 742 G 742 (956)
Q Consensus 742 g 742 (956)
.
T Consensus 218 ~ 218 (236)
T 2fea_A 218 V 218 (236)
T ss_dssp S
T ss_pred h
Confidence 3
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00012 Score=73.10 Aligned_cols=51 Identities=16% Similarity=0.015 Sum_probs=39.1
Q ss_pred ccccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHH
Q 043517 399 SDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAK 456 (956)
Q Consensus 399 GTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~ 456 (956)
||||+|+++|..+........ .+ ..++|..+.+++..++| |+.+||+++++
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~---~~--~~~lL~laaa~E~~SeH--PlA~AIv~~a~ 51 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNR---IS--HHKILAIVGTAESNSEH--PLGTAITKYCK 51 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTT---SC--HHHHHHHHHHGGGSSSC--HHHHHHHHHHH
T ss_pred CCCcCCcEEEEEEEecCCcCC---CC--HHHHHHHHHHHHccCCC--HHHHHHHHHHH
Confidence 899999999999987532100 11 24567778888888887 99999999997
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.86 E-value=1.9e-05 Score=80.01 Aligned_cols=122 Identities=11% Similarity=0.119 Sum_probs=85.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+ ++.|+ +. +++.++|+.+...+..+.+++|+ ... -..++++.+...
T Consensus 74 ~~~~~~~~-l~~l~-~~-~~~~i~t~~~~~~~~~~l~~~~l-~~~---------f~~~~~~~~~~~-------------- 126 (201)
T 2w43_A 74 KAYEDTKY-LKEIS-EI-AEVYALSNGSINEVKQHLERNGL-LRY---------FKGIFSAESVKE-------------- 126 (201)
T ss_dssp EECGGGGG-HHHHH-HH-SEEEEEESSCHHHHHHHHHHTTC-GGG---------CSEEEEGGGGTC--------------
T ss_pred ccCCChHH-HHHHH-hC-CeEEEEeCcCHHHHHHHHHHCCc-HHh---------CcEEEehhhcCC--------------
Confidence 46789999 99999 88 99999999999999999999998 222 123333322110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCC---CChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGE---RSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~---~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
..-.|+--..+.+.+. .+.++++||+.||..|.+.|+++.++-. ++.+..+..+|+++. ++..+.+.+.
T Consensus 127 --~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 198 (201)
T 2w43_A 127 --YKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWIL 198 (201)
T ss_dssp --CTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 1112333345555555 5789999999999999999999987721 322333456888877 6777776654
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.83 E-value=4.6e-06 Score=85.07 Aligned_cols=118 Identities=13% Similarity=0.059 Sum_probs=82.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +. +++.++|+.....+..+.+++|+ ... -..++++...
T Consensus 83 ~~~~~~~~~l~~l~-~~-~~~~i~s~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~---------------- 134 (209)
T 2hdo_A 83 ELYPGITSLFEQLP-SE-LRLGIVTSQRRNELESGMRSYPF--MMR--------MAVTISADDT---------------- 134 (209)
T ss_dssp EECTTHHHHHHHSC-TT-SEEEEECSSCHHHHHHHHTTSGG--GGG--------EEEEECGGGS----------------
T ss_pred CcCCCHHHHHHHHH-hc-CcEEEEeCCCHHHHHHHHHHcCh--Hhh--------ccEEEecCcC----------------
Confidence 35789999999999 88 99999999999999999999998 320 1222222211
Q ss_pred EEEecC--hhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCC--C-ChHHHHhcCCeeeccCChhHHH
Q 043517 666 VMANAS--PLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGE--R-SAQFARDCSDIVILDENFTTIA 736 (956)
Q Consensus 666 v~ar~~--p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~--~-~~~~ak~~Ad~vl~~~~~~~i~ 736 (956)
.... |+--..+.+.+.-..+.++++||+.||.+|.+.||+++++.. . +.+..+. ||+++. ++..+.
T Consensus 135 --~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~ 205 (209)
T 2hdo_A 135 --PKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDIL 205 (209)
T ss_dssp --SCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGG
T ss_pred --CCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHH
Confidence 0112 333344455554445789999999999999999999999742 2 2344445 999886 444444
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=2.4e-05 Score=80.39 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=84.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCC---------------HHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDD---------------INIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFR 650 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~---------------~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~ 650 (956)
++.|++.++++.|+ +.|+++.++|+.. ...+..+.+++|+ .- ...+..+...+
T Consensus 50 ~~~pg~~e~L~~L~-~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl--~f---------~~~~~~~~~~~ 117 (211)
T 2gmw_A 50 EFIDGVIDAMRELK-KMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDV--DL---------DGIYYCPHHPQ 117 (211)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTC--CC---------SEEEEECCBTT
T ss_pred cCCcCHHHHHHHHH-HCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCC--ce---------EEEEECCcCCC
Confidence 67899999999999 9999999999999 4677788888898 32 11111111000
Q ss_pred cCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc--EEe--CCCChHHHHhcCCee
Q 043517 651 SSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG--VSI--GERSAQFARDCSDIV 726 (956)
Q Consensus 651 ~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG--Iam--g~~~~~~ak~~Ad~v 726 (956)
....+ .... .....-.|+--..+.+.+.-..+.++|+||+.||+.+.+.|++. |.+ |....+.....+|++
T Consensus 118 ~~~~~----~~~~-~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~v 192 (211)
T 2gmw_A 118 GSVEE----FRQV-CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWV 192 (211)
T ss_dssp CSSGG----GBSC-CSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEE
T ss_pred Ccccc----cCcc-CcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEE
Confidence 00000 0000 00111223333445555554457899999999999999999964 333 322223334568998
Q ss_pred eccCChhHHHHHHHH
Q 043517 727 ILDENFTTIAANLKW 741 (956)
Q Consensus 727 l~~~~~~~i~~~i~~ 741 (956)
+. ++..+.+++..
T Consensus 193 i~--~l~el~~~l~~ 205 (211)
T 2gmw_A 193 LN--SLADLPQAIKK 205 (211)
T ss_dssp ES--CGGGHHHHHHC
T ss_pred eC--CHHHHHHHHHh
Confidence 87 77788776643
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.81 E-value=2.5e-05 Score=81.66 Aligned_cols=123 Identities=11% Similarity=0.120 Sum_probs=83.2
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.|++.+.++.|+ +.|+++.++|+.....+..+.+++|+ .. -..++++....
T Consensus 111 ~~~g~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~l~~~~l--~~---------f~~~~~~~~~~---------------- 162 (240)
T 2hi0_A 111 PFPGILDLMKNLR-QKGVKLAVVSNKPNEAVQVLVEELFP--GS---------FDFALGEKSGI---------------- 162 (240)
T ss_dssp ECTTHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHHHHST--TT---------CSEEEEECTTS----------------
T ss_pred cCCCHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHcCC--cc---------eeEEEecCCCC----------------
Confidence 5588999999999 99999999999988888888899998 32 12233222110
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc---EEeCCCChHHHH-hcCCeeeccCChhHHHHHH
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG---VSIGERSAQFAR-DCSDIVILDENFTTIAANL 739 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG---Iamg~~~~~~ak-~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+-=..+.+.+.-..+.++++||+.||+.|.+.||+. +++|....+..+ ..||+++. ++..+...+
T Consensus 163 ~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 163 RRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 011122222344444544457899999999999999999994 455522223333 46899886 677766554
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.80 E-value=2.4e-05 Score=80.63 Aligned_cols=122 Identities=15% Similarity=0.116 Sum_probs=82.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCc-ceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYD-AAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
++.+++.+.++.++ . ++.++|+........+.+++|+ ... - ..++++.....
T Consensus 87 ~~~~~~~~~l~~l~-~---~~~i~s~~~~~~~~~~l~~~~l--~~~--------~~~~~~~~~~~~~------------- 139 (229)
T 2fdr_A 87 KIIDGVKFALSRLT-T---PRCICSNSSSHRLDMMLTKVGL--KPY--------FAPHIYSAKDLGA------------- 139 (229)
T ss_dssp CBCTTHHHHHHHCC-S---CEEEEESSCHHHHHHHHHHTTC--GGG--------TTTCEEEHHHHCT-------------
T ss_pred ccCcCHHHHHHHhC-C---CEEEEECCChhHHHHHHHhCCh--HHh--------ccceEEecccccc-------------
Confidence 35678888888777 4 8999999999999999999998 320 1 22233221100
Q ss_pred eEEE--ecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCCCChH-------HHHhc-CCeeeccCChh
Q 043517 665 RVMA--NASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGERSAQ-------FARDC-SDIVILDENFT 733 (956)
Q Consensus 665 ~v~a--r~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~~~-------~ak~~-Ad~vl~~~~~~ 733 (956)
. .-.|+--..+.+.+.-..+.++++||+.||.+|++.||++ ++++ ++.+ ..++. ||+++. ++.
T Consensus 140 ---~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~--~~~ 213 (229)
T 2fdr_A 140 ---DRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQ 213 (229)
T ss_dssp ---TCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGG
T ss_pred ---CCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeec--CHH
Confidence 0 1123333445555554557899999999999999999998 7776 5543 35666 999987 666
Q ss_pred HHHHHHH
Q 043517 734 TIAANLK 740 (956)
Q Consensus 734 ~i~~~i~ 740 (956)
.+.+.++
T Consensus 214 el~~~l~ 220 (229)
T 2fdr_A 214 DLPAVIA 220 (229)
T ss_dssp GHHHHHH
T ss_pred HHHHHHH
Confidence 6766653
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.80 E-value=2.6e-05 Score=80.26 Aligned_cols=118 Identities=13% Similarity=0.043 Sum_probs=81.8
Q ss_pred cCcHHHHHHHHHHHhhCC-CEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAG-IKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~G-i~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
++.+++.+.++.|+ +.| +++.++|+........+.+.+|+ ... ...
T Consensus 105 ~~~~~~~~~l~~l~-~~g~~~~~i~t~~~~~~~~~~l~~~~~--~~~--------f~~---------------------- 151 (234)
T 3ddh_A 105 ELLPGVKETLKTLK-ETGKYKLVVATKGDLLDQENKLERSGL--SPY--------FDH---------------------- 151 (234)
T ss_dssp CBCTTHHHHHHHHH-HHCCCEEEEEEESCHHHHHHHHHHHTC--GGG--------CSE----------------------
T ss_pred CcCccHHHHHHHHH-hCCCeEEEEEeCCchHHHHHHHHHhCc--Hhh--------hhe----------------------
Confidence 46789999999999 999 99999999999888999999998 320 111
Q ss_pred eEEEecCh--hhHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCccEEeCC------CChHHHHhcC-CeeeccCChhH
Q 043517 665 RVMANASP--LDKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEADVGVSIGE------RSAQFARDCS-DIVILDENFTT 734 (956)
Q Consensus 665 ~v~ar~~p--~~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIamg~------~~~~~ak~~A-d~vl~~~~~~~ 734 (956)
+++...| +--..+.+.+.-..+.++++||+. ||..|.+.|++++++-. ++....+..+ |+++. ++..
T Consensus 152 -~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~--~l~e 228 (234)
T 3ddh_A 152 -IEVMSDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK--RLDD 228 (234)
T ss_dssp -EEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS--SGGG
T ss_pred -eeecCCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc--cHHH
Confidence 2333333 222334444433457899999996 99999999999988721 3333323444 88887 6777
Q ss_pred HHHHH
Q 043517 735 IAANL 739 (956)
Q Consensus 735 i~~~i 739 (956)
+.+++
T Consensus 229 l~~~l 233 (234)
T 3ddh_A 229 LLSLL 233 (234)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 76653
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.79 E-value=4.3e-06 Score=87.95 Aligned_cols=122 Identities=12% Similarity=0.065 Sum_probs=78.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHH-hcCCcccCCCCCCCCCCcceeeech--hhhcCCHHHHHhhhc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAI-NSGLILKPGAEDHSNGYDAAVIEAS--VFRSSSEETRSLMVD 662 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~-~~Gi~~~~~~~~~~~~~~~~~i~g~--~~~~~~~~~~~~~~~ 662 (956)
++.+++.+.++.|+ +.|+++.++|+.....+..... ..|+ ... -..++.+. ...
T Consensus 112 ~~~~~~~~~l~~l~-~~g~~~~i~sn~~~~~~~~~l~~~~~l-~~~---------f~~~~~~~~~~~~------------ 168 (250)
T 3l5k_A 112 ALMPGAEKLIIHLR-KHGIPFALATSSRSASFDMKTSRHKEF-FSL---------FSHIVLGDDPEVQ------------ 168 (250)
T ss_dssp CBCTTHHHHHHHHH-HTTCCEEEECSCCHHHHHHHTTTCHHH-HTT---------SSCEECTTCTTCC------------
T ss_pred CCCCCHHHHHHHHH-hCCCcEEEEeCCCHHHHHHHHHhccCH-Hhh---------eeeEEecchhhcc------------
Confidence 47789999999999 9999999999998766655433 3455 211 11222221 110
Q ss_pred cceEEEecChhhHHHHHHHHHhcC--CeEEEEcCCccCHHHhhhCC---ccEEeCCCChHHHHhcCCeeeccCChhHHHH
Q 043517 663 NVRVMANASPLDKLLMVQCLKQKG--EVVAVTGMSTRDAPSLKEAD---VGVSIGERSAQFARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 663 ~~~v~ar~~p~~K~~iv~~lq~~g--~~v~~iGDG~ND~~al~~Ad---vGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~ 737 (956)
...-.|+--..+.+.+.-.. +.++++||+.||+.|.+.|| +++++| ++.+..+..||+++. ++..+..
T Consensus 169 ----~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~--sl~el~~ 241 (250)
T 3l5k_A 169 ----HGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLN--SLQDFQP 241 (250)
T ss_dssp ----SCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECS--CGGGCCG
T ss_pred ----CCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeec--CHHHhhH
Confidence 00112222223333332223 78999999999999999999 566667 666667889999987 5555543
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.78 E-value=1.7e-05 Score=84.96 Aligned_cols=114 Identities=13% Similarity=0.021 Sum_probs=81.3
Q ss_pred CcHHHHHHHHHHHhhC-CCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 587 YASEVKQAIEDCRESA-GIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~-Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+.+++.+.++.|+ +. |+++.++|+.....+....+.+|+ .. ...++++.+...
T Consensus 115 ~~~g~~~~L~~l~-~~~g~~l~i~T~~~~~~~~~~l~~~~l--~~---------f~~i~~~~~~~~-------------- 168 (275)
T 2qlt_A 115 EVPGAVKLCNALN-ALPKEKWAVATSGTRDMAKKWFDILKI--KR---------PEYFITANDVKQ-------------- 168 (275)
T ss_dssp ECTTHHHHHHHHH-TSCGGGEEEECSSCHHHHHHHHHHHTC--CC---------CSSEECGGGCSS--------------
T ss_pred cCcCHHHHHHHHH-hccCCeEEEEeCCCHHHHHHHHHHcCC--Cc---------cCEEEEcccCCC--------------
Confidence 4689999999999 99 999999999999999999999998 42 122334332211
Q ss_pred EEEecChhhHHHHHHHHHh-------cCCeEEEEcCCccCHHHhhhCCccEEe---CCCChHHHH-hcCCeeecc
Q 043517 666 VMANASPLDKLLMVQCLKQ-------KGEVVAVTGMSTRDAPSLKEADVGVSI---GERSAQFAR-DCSDIVILD 729 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~-------~g~~v~~iGDG~ND~~al~~AdvGIam---g~~~~~~ak-~~Ad~vl~~ 729 (956)
..-.|+--..+.+.+.- ..+.++++||+.||.+|++.||+++++ | ++.+..+ ..||+++.+
T Consensus 169 --~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~-~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 169 --GKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATT-FDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp --CTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSS-SCHHHHTTSSCSEEESS
T ss_pred --CCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCC-CCHHHHhhCCCCEEECC
Confidence 11134444555555555 556799999999999999999977665 5 3333333 459998874
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.75 E-value=4e-05 Score=79.32 Aligned_cols=125 Identities=10% Similarity=-0.003 Sum_probs=85.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +. +++.++|+.....+....+.+|+ ..- -..++.+.....
T Consensus 103 ~~~~~~~~~l~~l~-~~-~~~~i~t~~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~~-------------- 156 (238)
T 3ed5_A 103 QLIDGAFDLISNLQ-QQ-FDLYIVTNGVSHTQYKRLRDSGL--FPF--------FKDIFVSEDTGF-------------- 156 (238)
T ss_dssp CBCTTHHHHHHHHH-TT-SEEEEEECSCHHHHHHHHHHTTC--GGG--------CSEEEEGGGTTS--------------
T ss_pred CCCccHHHHHHHHH-hc-CeEEEEeCCCHHHHHHHHHHcCh--Hhh--------hheEEEecccCC--------------
Confidence 56789999999999 88 99999999999999999999998 320 122222222110
Q ss_pred EEEecChhhHHHHHHHHH-hcCCeEEEEcCCc-cCHHHhhhCCccEE-eCCCC--hHHHHhcCCeeeccCChhHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLK-QKGEVVAVTGMST-RDAPSLKEADVGVS-IGERS--AQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq-~~g~~v~~iGDG~-ND~~al~~AdvGIa-mg~~~--~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
..-.|+--..+.+.+. -..+.++++||+. ||+.|.+.||++.+ ++ .+ .+..+..||+++. ++..+.++++
T Consensus 157 --~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 157 --QKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMN-PDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp --CTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEEC-TTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred --CCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEEC-CCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 0111222223333333 2336899999998 99999999999643 43 33 4455678999988 7888888775
Q ss_pred H
Q 043517 741 W 741 (956)
Q Consensus 741 ~ 741 (956)
.
T Consensus 232 ~ 232 (238)
T 3ed5_A 232 I 232 (238)
T ss_dssp C
T ss_pred h
Confidence 4
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.75 E-value=2.4e-05 Score=82.11 Aligned_cols=123 Identities=11% Similarity=0.075 Sum_probs=86.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.|+ +. +++.++|+........+.+.+|+ .- ..++.+....
T Consensus 120 ~~~~~~~~~l~~l~-~~-~~~~i~s~~~~~~~~~~l~~~g~--~f----------~~~~~~~~~~--------------- 170 (254)
T 3umc_A 120 RPWPDTLAGMHALK-AD-YWLAALSNGNTALMLDVARHAGL--PW----------DMLLCADLFG--------------- 170 (254)
T ss_dssp EECTTHHHHHHHHT-TT-SEEEECCSSCHHHHHHHHHHHTC--CC----------SEECCHHHHT---------------
T ss_pred CCCccHHHHHHHHH-hc-CeEEEEeCCCHHHHHHHHHHcCC--Cc----------ceEEeecccc---------------
Confidence 45689999999999 75 99999999999999999999998 32 1222221110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCC----CCh---HHH--HhcCCeeeccCChhHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGE----RSA---QFA--RDCSDIVILDENFTTIA 736 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~----~~~---~~a--k~~Ad~vl~~~~~~~i~ 736 (956)
...-.|+--..+.+.+.-..+.++++||+.||+.|.+.|+++++|.. .|. +.. +..||+++. ++..+.
T Consensus 171 -~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~ 247 (254)
T 3umc_A 171 -HYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLH 247 (254)
T ss_dssp -CCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHH
T ss_pred -cCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHH
Confidence 01112333344455554445789999999999999999999999983 122 222 567899988 788887
Q ss_pred HHHH
Q 043517 737 ANLK 740 (956)
Q Consensus 737 ~~i~ 740 (956)
+++.
T Consensus 248 ~~l~ 251 (254)
T 3umc_A 248 RQLA 251 (254)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 7764
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.71 E-value=2.7e-05 Score=81.40 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=86.1
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.|+ +. +++.++|+........+.+.+|+ .- ..++++.....
T Consensus 116 ~~~~~~~~~l~~l~-~~-~~~~i~t~~~~~~~~~~l~~~~~--~f----------~~~~~~~~~~~-------------- 167 (254)
T 3umg_A 116 TPWPDSVPGLTAIK-AE-YIIGPLSNGNTSLLLDMAKNAGI--PW----------DVIIGSDINRK-------------- 167 (254)
T ss_dssp CBCTTHHHHHHHHH-HH-SEEEECSSSCHHHHHHHHHHHTC--CC----------SCCCCHHHHTC--------------
T ss_pred cCCcCHHHHHHHHH-hC-CeEEEEeCCCHHHHHHHHHhCCC--Ce----------eEEEEcCcCCC--------------
Confidence 56789999999999 76 99999999999999999999998 31 11122211110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChH--------H--HHhcCCeeeccCChhHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQ--------F--ARDCSDIVILDENFTTI 735 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~--------~--ak~~Ad~vl~~~~~~~i 735 (956)
..-.|+--..+.+.+.-..+.++++||+.||+.|.+.||++++|. +... . .+..+|+++. ++..+
T Consensus 168 --~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el 242 (254)
T 3umg_A 168 --YKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFI-LRPVEHGPHQTDDLAPTGSWDISAT--DITDL 242 (254)
T ss_dssp --CTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEE-CCTTTTCTTCCSCSSCSSCCSEEES--SHHHH
T ss_pred --CCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEE-ecCCcCCCCccccccccCCCceEEC--CHHHH
Confidence 011122222333333333478999999999999999999999997 3211 1 3567899988 88888
Q ss_pred HHHHHH
Q 043517 736 AANLKW 741 (956)
Q Consensus 736 ~~~i~~ 741 (956)
.+++..
T Consensus 243 ~~~l~~ 248 (254)
T 3umg_A 243 AAQLRA 248 (254)
T ss_dssp HHHHHH
T ss_pred HHHhcC
Confidence 888765
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.70 E-value=5.3e-05 Score=75.60 Aligned_cols=107 Identities=16% Similarity=0.057 Sum_probs=71.6
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.|++.+.++.|+ +.|+++.++|+... .+....+++|+ ... -..++++....
T Consensus 83 ~~~~~~~~l~~l~-~~g~~~~i~t~~~~-~~~~~l~~~~~--~~~--------f~~~~~~~~~~---------------- 134 (190)
T 2fi1_A 83 LFEGVSDLLEDIS-NQGGRHFLVSHRND-QVLEILEKTSI--AAY--------FTEVVTSSSGF---------------- 134 (190)
T ss_dssp BCTTHHHHHHHHH-HTTCEEEEECSSCT-HHHHHHHHTTC--GGG--------EEEEECGGGCC----------------
T ss_pred cCcCHHHHHHHHH-HCCCcEEEEECCcH-HHHHHHHHcCC--Hhh--------eeeeeeccccC----------------
Confidence 5689999999999 99999999999864 56778888898 320 12223322110
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCC
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD 724 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad 724 (956)
...-.|+--..+.+.+.-. .++++||+.||.+|.+.|++++++. +.....++..+
T Consensus 135 ~~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 135 KRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp CCTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 0011233233344433322 7999999999999999999999887 55555555443
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=5e-05 Score=80.08 Aligned_cols=51 Identities=16% Similarity=0.185 Sum_probs=39.2
Q ss_pred hHHHHHHHHHhcCCeEEEEcC----CccCHHHhhhCC-ccEEeCCCChHHHHhcCCe
Q 043517 674 DKLLMVQCLKQKGEVVAVTGM----STRDAPSLKEAD-VGVSIGERSAQFARDCSDI 725 (956)
Q Consensus 674 ~K~~iv~~lq~~g~~v~~iGD----G~ND~~al~~Ad-vGIamg~~~~~~ak~~Ad~ 725 (956)
.|..-++.|.+..+.|+++|| |.||.+||+.|+ +|++|+ |+.+..|..+++
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~~ 242 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEKI 242 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHHH
Confidence 455555554444578999999 799999999996 899999 888887765443
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.67 E-value=3.3e-05 Score=82.09 Aligned_cols=126 Identities=12% Similarity=0.095 Sum_probs=87.3
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ +.|+++.++|+... ....+.+.+|+ ... -..++.+.+..
T Consensus 106 ~~~~~~~~~l~~l~-~~g~~~~i~tn~~~-~~~~~l~~~gl-~~~---------f~~~~~~~~~~--------------- 158 (263)
T 3k1z_A 106 QVLDGAEDTLRECR-TRGLRLAVISNFDR-RLEGILGGLGL-REH---------FDFVLTSEAAG--------------- 158 (263)
T ss_dssp EECTTHHHHHHHHH-HTTCEEEEEESCCT-THHHHHHHTTC-GGG---------CSCEEEHHHHS---------------
T ss_pred eECcCHHHHHHHHH-hCCCcEEEEeCCcH-HHHHHHHhCCc-HHh---------hhEEEeecccC---------------
Confidence 36699999999999 99999999999766 46788889998 222 12223322211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCccEEeCCCChHH-----HHhcCCeeeccCChhHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEADVGVSIGERSAQF-----ARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIamg~~~~~~-----ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+--..+.+.+.-..+.++++||+. ||+.|.+.||+++++...+... ....+|+++. ++..+.+++
T Consensus 159 -~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l 235 (263)
T 3k1z_A 159 -WPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPAL 235 (263)
T ss_dssp -SCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHH
T ss_pred -CCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHH
Confidence 111233444555555555567899999997 9999999999999987333211 2236899987 777888776
Q ss_pred HH
Q 043517 740 KW 741 (956)
Q Consensus 740 ~~ 741 (956)
+.
T Consensus 236 ~~ 237 (263)
T 3k1z_A 236 DC 237 (263)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.66 E-value=5.6e-05 Score=78.13 Aligned_cols=122 Identities=16% Similarity=0.100 Sum_probs=84.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ + |+++.++|+..........+.++- . -..++++.++..
T Consensus 99 ~~~~~~~~~l~~l~-~-~~~~~i~tn~~~~~~~~~l~~l~~--~----------fd~i~~~~~~~~-------------- 150 (240)
T 3smv_A 99 PAFPDTVEALQYLK-K-HYKLVILSNIDRNEFKLSNAKLGV--E----------FDHIITAQDVGS-------------- 150 (240)
T ss_dssp CBCTTHHHHHHHHH-H-HSEEEEEESSCHHHHHHHHTTTCS--C----------CSEEEEHHHHTS--------------
T ss_pred CCCCcHHHHHHHHH-h-CCeEEEEeCCChhHHHHHHHhcCC--c----------cCEEEEccccCC--------------
Confidence 57899999999999 8 899999999998888777776543 1 223333332211
Q ss_pred EEEecChhhHHHHHHHHHh---cCCeEEEEcCCc-cCHHHhhhCCccEEeCCCCh-----------HHHHhcCCeeeccC
Q 043517 666 VMANASPLDKLLMVQCLKQ---KGEVVAVTGMST-RDAPSLKEADVGVSIGERSA-----------QFARDCSDIVILDE 730 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~---~g~~v~~iGDG~-ND~~al~~AdvGIamg~~~~-----------~~ak~~Ad~vl~~~ 730 (956)
..-+|+-....++.+++ ..+.++++||+. ||+.|.+.||++++|. +.. +..+..||+++.
T Consensus 151 --~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~-~~~~~~~g~g~~~~~~~~~~ad~v~~-- 225 (240)
T 3smv_A 151 --YKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWI-YRRHGKEGYGATHVPSRMPNVDFRFN-- 225 (240)
T ss_dssp --CTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEE-CTTCC-------CCCSSCCCCSEEES--
T ss_pred --CCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEE-cCCCcccCCCCCCCCcCCCCCCEEeC--
Confidence 11233333345333443 347899999996 9999999999999995 322 233478999997
Q ss_pred ChhHHHHHHH
Q 043517 731 NFTTIAANLK 740 (956)
Q Consensus 731 ~~~~i~~~i~ 740 (956)
++..+.++++
T Consensus 226 ~~~el~~~l~ 235 (240)
T 3smv_A 226 SMGEMAEAHK 235 (240)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 7777777764
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.64 E-value=7.5e-05 Score=77.24 Aligned_cols=123 Identities=7% Similarity=-0.016 Sum_probs=84.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.++ .|+++.++|+.....+....+.+|+ ... -..++.+.....
T Consensus 107 ~~~~~~~~~l~~l~--~g~~~~i~sn~~~~~~~~~l~~~~l--~~~--------f~~~~~~~~~~~-------------- 160 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA--PQYNLYILSNGFRELQSRKMRSAGV--DRY--------FKKIILSEDLGV-------------- 160 (240)
T ss_dssp CBSTTHHHHHHHHT--TTSEEEEEECSCHHHHHHHHHHHTC--GGG--------CSEEEEGGGTTC--------------
T ss_pred CcCccHHHHHHHHH--cCCeEEEEeCCchHHHHHHHHHcCh--Hhh--------ceeEEEeccCCC--------------
Confidence 46789999999997 5899999999999999999999998 321 122333222110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCccEEeCCCChH-HHHhcCCeeeccCChhHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEADVGVSIGERSAQ-FARDCSDIVILDENFTTIAAN 738 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIamg~~~~~-~ak~~Ad~vl~~~~~~~i~~~ 738 (956)
..-.|+--..+.+.+.-..+.++++||+. ||+.|.+.||++++|...+.. ..+..+|+++. ++..+..+
T Consensus 161 --~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~ 231 (240)
T 3qnm_A 161 --LKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNL 231 (240)
T ss_dssp --CTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHH
T ss_pred --CCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHH
Confidence 11122222333444433357899999995 999999999999999833331 45567999998 66666544
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.62 E-value=7.4e-05 Score=78.70 Aligned_cols=124 Identities=15% Similarity=0.143 Sum_probs=86.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+ ... -..++.+....
T Consensus 93 ~~~~~~~~~l~~l~---g~~~~i~t~~~~~~~~~~l~~~gl--~~~--------f~~~~~~~~~~--------------- 144 (253)
T 1qq5_A 93 TPYPDAAQCLAELA---PLKRAILSNGAPDMLQALVANAGL--TDS--------FDAVISVDAKR--------------- 144 (253)
T ss_dssp CBCTTHHHHHHHHT---TSEEEEEESSCHHHHHHHHHHTTC--GGG--------CSEEEEGGGGT---------------
T ss_pred CCCccHHHHHHHHc---CCCEEEEeCcCHHHHHHHHHHCCc--hhh--------ccEEEEccccC---------------
Confidence 57799999999885 899999999999999999999998 320 12233322211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCC---------------------------hHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERS---------------------------AQF 718 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~---------------------------~~~ 718 (956)
...-.|+--..+.+.+.-..+.++++||+.||..|.+.|+++.++. +. .+.
T Consensus 145 -~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~ 222 (253)
T 1qq5_A 145 -VFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARV-ARLSQEALARELVSGTIAPLTMFKALRMREET 222 (253)
T ss_dssp -CCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEE-CCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCT
T ss_pred -CCCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEE-CCcccchhhhhcccccccccccccccccccCC
Confidence 0111233334455555444578999999999999999999999887 44 122
Q ss_pred HHhcCCeeeccCChhHHHHHHHH
Q 043517 719 ARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 719 ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.+..+|+++. ++..+.+.+.+
T Consensus 223 ~~~~~~~~~~--~~~el~~~l~~ 243 (253)
T 1qq5_A 223 YAEAPDFVVP--ALGDLPRLVRG 243 (253)
T ss_dssp TSCCCSEEES--SGGGHHHHHHH
T ss_pred CCCCCCeeeC--CHHHHHHHHHH
Confidence 3456888887 77777776643
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.56 E-value=8.4e-05 Score=75.95 Aligned_cols=114 Identities=13% Similarity=0.112 Sum_probs=79.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ + |+++.++|+.+...+..+.+++|+ ... -..
T Consensus 84 ~~~~g~~~~l~~L~-~-~~~l~i~T~~~~~~~~~~l~~~gl-~~~---------f~~----------------------- 128 (210)
T 2ah5_A 84 QLFPQIIDLLEELS-S-SYPLYITTTKDTSTAQDMAKNLEI-HHF---------FDG----------------------- 128 (210)
T ss_dssp EECTTHHHHHHHHH-T-TSCEEEEEEEEHHHHHHHHHHTTC-GGG---------CSE-----------------------
T ss_pred CCCCCHHHHHHHHH-c-CCeEEEEeCCCHHHHHHHHHhcCc-hhh---------eee-----------------------
Confidence 36689999999999 9 999999999988888888999999 221 111
Q ss_pred EEEec-ChhhHHHHHHH-HHhc---CCeEEEEcCCccCHHHhhhCCc---cEEeCCCC-hHHHH-hcCCeeeccCChhHH
Q 043517 666 VMANA-SPLDKLLMVQC-LKQK---GEVVAVTGMSTRDAPSLKEADV---GVSIGERS-AQFAR-DCSDIVILDENFTTI 735 (956)
Q Consensus 666 v~ar~-~p~~K~~iv~~-lq~~---g~~v~~iGDG~ND~~al~~Adv---GIamg~~~-~~~ak-~~Ad~vl~~~~~~~i 735 (956)
+++.- .+.-|.++.+. +++. .+.++++||+.||+.|.+.||+ ++++| ++ .+..+ ..+|+++. ++..+
T Consensus 129 i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~~--~~~el 205 (210)
T 2ah5_A 129 IYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIAH--KPLEV 205 (210)
T ss_dssp EEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEES--STTHH
T ss_pred eecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEEC--CHHHH
Confidence 22211 11123333333 3333 4679999999999999999999 77777 44 44444 36899887 55555
Q ss_pred HH
Q 043517 736 AA 737 (956)
Q Consensus 736 ~~ 737 (956)
..
T Consensus 206 ~~ 207 (210)
T 2ah5_A 206 LA 207 (210)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0001 Score=74.00 Aligned_cols=87 Identities=14% Similarity=0.027 Sum_probs=65.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCC-HHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDD-INIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~-~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
++.|++.++++.|+ +.|+++.++||.. ...+..+.+.+|+ ..
T Consensus 68 ~~~~g~~e~L~~L~-~~G~~v~ivT~~~~~~~~~~~l~~~gl--~~---------------------------------- 110 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQ-SLGVPGAAASRTSEIEGANQLLELFDL--FR---------------------------------- 110 (187)
T ss_dssp CCCTTHHHHHHHHH-HHTCCEEEEECCSCHHHHHHHHHHTTC--TT----------------------------------
T ss_pred CcchhHHHHHHHHH-HCCceEEEEeCCCChHHHHHHHHHcCc--Hh----------------------------------
Confidence 57899999999999 9999999999999 7899999999999 43
Q ss_pred eEEEe--cChhhHHH----HHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 665 RVMAN--ASPLDKLL----MVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 665 ~v~ar--~~p~~K~~----iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
.|.. ..+..|.+ +.+.+.-..+.++++||+.+|+.+.+.|++...
T Consensus 111 -~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 111 -YFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp -TEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred -hcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 1111 11222333 333333234679999999999999999998644
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00039 Score=69.81 Aligned_cols=136 Identities=10% Similarity=0.060 Sum_probs=89.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCH---HHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDI---NIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVD 662 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~---~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 662 (956)
++.|++.++++.|+ +.|+++.++|+... ..+..+.+.+|+ ..- -..++.+.+....
T Consensus 34 ~~~~g~~~~L~~L~-~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl--~~~--------fd~i~~~~~~~~~---------- 92 (189)
T 3ib6_A 34 VLRKNAKETLEKVK-QLGFKQAILSNTATSDTEVIKRVLTNFGI--IDY--------FDFIYASNSELQP---------- 92 (189)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEEECCSSCCHHHHHHHHHHTTC--GGG--------EEEEEECCTTSST----------
T ss_pred eeCcCHHHHHHHHH-HCCCEEEEEECCCccchHHHHHHHHhcCc--hhh--------eEEEEEccccccc----------
Confidence 58899999999999 99999999998876 888899999999 320 1122221111000
Q ss_pred cceEEEecChhhHHHHHHHHHhcCCeEEEEcCC-ccCHHHhhhCCccEEeCCCChH-----HHH-hcCCeeeccCChhHH
Q 043517 663 NVRVMANASPLDKLLMVQCLKQKGEVVAVTGMS-TRDAPSLKEADVGVSIGERSAQ-----FAR-DCSDIVILDENFTTI 735 (956)
Q Consensus 663 ~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG-~ND~~al~~AdvGIamg~~~~~-----~ak-~~Ad~vl~~~~~~~i 735 (956)
.-...-.|+--..+.+.+.-..+.++++||+ .+|+.+-+.||+....-.++.. ... ..+|.++.+.++..+
T Consensus 93 --~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l 170 (189)
T 3ib6_A 93 --GKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADV 170 (189)
T ss_dssp --TCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGH
T ss_pred --cCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhH
Confidence 0001112333345555555456789999999 7999999999997543213221 111 267888887788888
Q ss_pred HHHHHHhhh
Q 043517 736 AANLKWGRC 744 (956)
Q Consensus 736 ~~~i~~gR~ 744 (956)
.++++..+.
T Consensus 171 ~~~l~l~~~ 179 (189)
T 3ib6_A 171 PEALLLLKK 179 (189)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888765443
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.42 E-value=8.4e-05 Score=75.57 Aligned_cols=102 Identities=11% Similarity=-0.005 Sum_probs=71.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHh------cCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAIN------SGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSL 659 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~------~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 659 (956)
++.|++.+.++.|+ + |+++.++|+.....+..+.+. .|+ ... -..++.+....
T Consensus 89 ~~~~~~~~~l~~l~-~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l--~~~--------f~~~~~~~~~~--------- 147 (211)
T 2i6x_A 89 EISAEKFDYIDSLR-P-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTL--DSF--------FDKVYASCQMG--------- 147 (211)
T ss_dssp EECHHHHHHHHHHT-T-TSEEEEEECCCHHHHHHHTSTTSSTTCCCG--GGG--------SSEEEEHHHHT---------
T ss_pred ccChHHHHHHHHHH-c-CCeEEEEeCCCHHHHHHHHhhhccccccCH--HHH--------cCeEEeecccC---------
Confidence 46799999999999 8 999999999998888888887 677 320 12222222111
Q ss_pred hhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCCh
Q 043517 660 MVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSA 716 (956)
Q Consensus 660 ~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~ 716 (956)
...-.|+--..+.+.+.-..+.++++||+.||..|.+.||++.++. ++.
T Consensus 148 -------~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~-~~~ 196 (211)
T 2i6x_A 148 -------KYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCP-DNG 196 (211)
T ss_dssp -------CCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTT
T ss_pred -------CCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEE-CCH
Confidence 0111233334455555444578999999999999999999999987 443
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00047 Score=70.35 Aligned_cols=125 Identities=18% Similarity=0.097 Sum_probs=83.2
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.|++.++++.|+ +.|+++.++|+.+...+....+.+|+ .+. -..++.+.+..
T Consensus 85 ~~pg~~~~l~~L~-~~g~~~~i~tn~~~~~~~~~l~~~~l-~~~---------fd~~~~~~~~~---------------- 137 (216)
T 3kbb_A 85 ENPGVREALEFVK-SKRIKLALATSTPQREALERLRRLDL-EKY---------FDVMVFGDQVK---------------- 137 (216)
T ss_dssp BCTTHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHHTTC-GGG---------CSEEECGGGSS----------------
T ss_pred cCccHHHHHHHHH-HcCCCcccccCCcHHHHHHHHHhcCC-Ccc---------ccccccccccC----------------
Confidence 5689999999999 99999999999999999999999999 322 22333332221
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE----EeCCCChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV----SIGERSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI----amg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
...-.|+--....+.+.-..+.++|+||..+|+.+-+.||+.. .-|.+..+..+++.+..+. +...+.+.++
T Consensus 138 ~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~--~~~eli~~l~ 213 (216)
T 3kbb_A 138 NGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILNVLK 213 (216)
T ss_dssp SCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE--CGGGHHHHHH
T ss_pred CCcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC--CHHHHHHHHH
Confidence 1112344445555666555678999999999999999999853 2232333444444344443 2344555554
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00024 Score=71.52 Aligned_cols=102 Identities=10% Similarity=0.021 Sum_probs=72.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.| ++.++|+.+......+.+.+|+ ... -..++.+....
T Consensus 86 ~~~~~~~~~l~~l~-~~g-~~~i~s~~~~~~~~~~l~~~~~--~~~--------f~~~~~~~~~~--------------- 138 (200)
T 3cnh_A 86 QPRPEVLALARDLG-QRY-RMYSLNNEGRDLNEYRIRTFGL--GEF--------LLAFFTSSALG--------------- 138 (200)
T ss_dssp CBCHHHHHHHHHHT-TTS-EEEEEECCCHHHHHHHHHHHTG--GGT--------CSCEEEHHHHS---------------
T ss_pred ccCccHHHHHHHHH-HcC-CEEEEeCCcHHHHHHHHHhCCH--HHh--------cceEEeecccC---------------
Confidence 36799999999999 999 9999999999999999999998 321 12222222111
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCC
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERS 715 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~ 715 (956)
...-.|+--..+.+.+.-..+.++++||+.||+.|.+.|++..++-..+
T Consensus 139 -~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 139 -VMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp -CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred -CCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 0112333334455555545578999999999999999999998876333
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00062 Score=72.18 Aligned_cols=41 Identities=5% Similarity=0.059 Sum_probs=35.4
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcC---CCHHHHHHHHHhcCC
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILE---DDINIARLIAINSGL 626 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TG---d~~~ta~~ia~~~Gi 626 (956)
+.+-++++++|++++ ++|++++++|| +.........+++|+
T Consensus 21 ~~~~~~~~~ai~~l~-~~Gi~v~laTgrs~r~~~~~~~~l~~lg~ 64 (266)
T 3pdw_A 21 TEKIEEACEFVRTLK-DRGVPYLFVTNNSSRTPKQVADKLVSFDI 64 (266)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCEEEEESCCSSCHHHHHHHHHHTTC
T ss_pred CEeCccHHHHHHHHH-HCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 345578999999999 99999999988 777777788888898
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00011 Score=75.73 Aligned_cols=134 Identities=13% Similarity=0.033 Sum_probs=77.8
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCH---------------HHHHHHHHhcCCcccCCCCCCCCCCcceeee--ch
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDI---------------NIARLIAINSGLILKPGAEDHSNGYDAAVIE--AS 647 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~---------------~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~--g~ 647 (956)
.++.|++.+++++|+ +.|+++.++|+... ..+..+.+++|+ .- ...... +.
T Consensus 55 ~~~~~g~~e~L~~L~-~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl--~~---------~~~~~~~~~~ 122 (218)
T 2o2x_A 55 IVLRPQMLPAIATAN-RAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV--FV---------DMVLACAYHE 122 (218)
T ss_dssp CCBCGGGHHHHHHHH-HHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC--CC---------SEEEEECCCT
T ss_pred CeECcCHHHHHHHHH-HCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCC--ce---------eeEEEeecCC
Confidence 467899999999999 99999999999987 677788888897 21 011000 00
Q ss_pred hhhcCCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE-E-eCCCCh---HHHHhc
Q 043517 648 VFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV-S-IGERSA---QFARDC 722 (956)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI-a-mg~~~~---~~ak~~ 722 (956)
. ..+. ...... ....-.|+--..+.+.+.-..+.++|+||+.||+.+.+.|++.. . +. .|. +.....
T Consensus 123 ~-g~~~-----~~~~~~-~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~-~g~~~~~~~~~~ 194 (218)
T 2o2x_A 123 A-GVGP-----LAIPDH-PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVD-GEAAVQPGFAIR 194 (218)
T ss_dssp T-CCST-----TCCSSC-TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEET-CCCEEETTEEEE
T ss_pred C-Ccee-----ecccCC-ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEe-cCCCCcccccCC
Confidence 0 0000 000000 00001122223334444334567999999999999999999865 3 32 222 111234
Q ss_pred CCeeeccCChhHHHHHHH
Q 043517 723 SDIVILDENFTTIAANLK 740 (956)
Q Consensus 723 Ad~vl~~~~~~~i~~~i~ 740 (956)
+|+++. ++..+.+++.
T Consensus 195 ~~~~i~--~l~el~~~l~ 210 (218)
T 2o2x_A 195 PLRDSS--ELGDLLAAIE 210 (218)
T ss_dssp EESSHH--HHHHHHHHHH
T ss_pred CCEecc--cHHHHHHHHH
Confidence 566555 5666655553
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00025 Score=75.37 Aligned_cols=42 Identities=17% Similarity=0.114 Sum_probs=35.9
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcC---CCHHHHHHHHHhcCC
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILE---DDINIARLIAINSGL 626 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TG---d~~~ta~~ia~~~Gi 626 (956)
.+.+-|+++++|++++ ++|++++++|| ++........+++|+
T Consensus 22 ~~~~~~~~~~ai~~l~-~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~ 66 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLK-ELGKKIIFVSNNSTRSRRILLERLRSFGL 66 (268)
T ss_dssp TTEECHHHHHHHHHHH-HTTCEEEEEECCSSSCHHHHHHHHHHTTC
T ss_pred CCEeCcCHHHHHHHHH-HcCCeEEEEeCcCCCCHHHHHHHHHHCCC
Confidence 4445688999999999 99999999999 677777777888888
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00011 Score=78.19 Aligned_cols=59 Identities=17% Similarity=0.276 Sum_probs=48.7
Q ss_pred hhHHHHHHHH-HhcCCeEEEEcC----CccCHHHhhhCC-ccEEeCCCChHHHHhcCCeeeccCCh
Q 043517 673 LDKLLMVQCL-KQKGEVVAVTGM----STRDAPSLKEAD-VGVSIGERSAQFARDCSDIVILDENF 732 (956)
Q Consensus 673 ~~K~~iv~~l-q~~g~~v~~iGD----G~ND~~al~~Ad-vGIamg~~~~~~ak~~Ad~vl~~~~~ 732 (956)
-.|..-++.+ .-..+.|+++|| +.||.+||+.|+ +|+||+ |+.+..|+.||+++.+++.
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~~ 260 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETAH 260 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC--
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCcC
Confidence 3587777777 111468999999 999999999999 599998 9999999999999986654
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0011 Score=69.25 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=81.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.|+ .|+++.++|+.....+....+.+|+ ... ...
T Consensus 112 ~~~~~~~~~l~~l~--~~~~~~i~t~~~~~~~~~~l~~~~l--~~~--------f~~----------------------- 156 (251)
T 2pke_A 112 EVIAGVREAVAAIA--ADYAVVLITKGDLFHQEQKIEQSGL--SDL--------FPR----------------------- 156 (251)
T ss_dssp CBCTTHHHHHHHHH--TTSEEEEEEESCHHHHHHHHHHHSG--GGT--------CCC-----------------------
T ss_pred CcCccHHHHHHHHH--CCCEEEEEeCCCHHHHHHHHHHcCc--HHh--------Cce-----------------------
Confidence 45799999999997 5799999999999888888999998 320 000
Q ss_pred EEEecC--hhhHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCccEEeCCCChH--------HHHhcCCe-eeccCChh
Q 043517 666 VMANAS--PLDKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEADVGVSIGERSAQ--------FARDCSDI-VILDENFT 733 (956)
Q Consensus 666 v~ar~~--p~~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIamg~~~~~--------~ak~~Ad~-vl~~~~~~ 733 (956)
+++... |+--..+.+.+.-..+.++++||+. ||..|.+.||+++++-..+.. .....+|+ ++. ++.
T Consensus 157 i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~ 234 (251)
T 2pke_A 157 IEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPS 234 (251)
T ss_dssp EEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGG
T ss_pred eeeeCCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHH
Confidence 333333 3333444555544457899999999 999999999999876323321 11245787 676 677
Q ss_pred HHHHHHH
Q 043517 734 TIAANLK 740 (956)
Q Consensus 734 ~i~~~i~ 740 (956)
.+..+++
T Consensus 235 el~~~l~ 241 (251)
T 2pke_A 235 GWPAAVR 241 (251)
T ss_dssp GHHHHHH
T ss_pred HHHHHHH
Confidence 7776654
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0006 Score=70.04 Aligned_cols=119 Identities=15% Similarity=0.131 Sum_probs=78.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ +. +++.++|+.... .+.+|+ ... -..++.+....
T Consensus 105 ~~~~~~~~~l~~l~-~~-~~~~i~t~~~~~-----l~~~~l--~~~--------f~~~~~~~~~~--------------- 152 (230)
T 3vay_A 105 QIFPEVQPTLEILA-KT-FTLGVITNGNAD-----VRRLGL--ADY--------FAFALCAEDLG--------------- 152 (230)
T ss_dssp CBCTTHHHHHHHHH-TT-SEEEEEESSCCC-----GGGSTT--GGG--------CSEEEEHHHHT---------------
T ss_pred ccCcCHHHHHHHHH-hC-CeEEEEECCchh-----hhhcCc--HHH--------eeeeEEccccC---------------
Confidence 36789999999999 88 999999987654 466777 320 12222222111
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCccEEe---CCCChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEADVGVSI---GERSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~AdvGIam---g~~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
...-.|+--..+.+.+.-..+.++++||+. ||+.|.+.||++.++ |.+..+. +..+|+++. ++..+.++++
T Consensus 153 -~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 153 -IGKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp -CCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred -CCCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 011123333445555544457899999998 999999999999887 2122222 567899988 7888887764
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00024 Score=66.69 Aligned_cols=99 Identities=6% Similarity=-0.030 Sum_probs=67.8
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.++.|++.++++.|+ +.|+++.++|+.+...+..+.+++|+ ... -..++.+.+..
T Consensus 17 ~~~~~~~~~~l~~L~-~~G~~~~i~S~~~~~~~~~~l~~~~l--~~~--------f~~i~~~~~~~-------------- 71 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAK-KNGVGTVILSNDPGGLGAAPIRELET--NGV--------VDKVLLSGELG-------------- 71 (137)
T ss_dssp HHHHHHHHHHHHHHH-HTTCEEEEEECSCCGGGGHHHHHHHH--TTS--------SSEEEEHHHHS--------------
T ss_pred CccCccHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHCCh--Hhh--------ccEEEEeccCC--------------
Confidence 357789999999999 99999999999999888888888887 321 12222222110
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS 710 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa 710 (956)
...-.|+--..+.+.+.-..+.++++||+.+|..+.+.|++...
T Consensus 72 --~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i 115 (137)
T 2pr7_A 72 --VEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGV 115 (137)
T ss_dssp --CCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred --CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEE
Confidence 01112332333444443334579999999999999999998543
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0012 Score=69.95 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=84.3
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ + ++++.++|+.+...+..+.+.+|+ ..- -..++.+.+..
T Consensus 121 ~~~~g~~~~L~~L~-~-~~~l~i~Tn~~~~~~~~~l~~~gl--~~~--------f~~i~~~~~~~--------------- 173 (260)
T 2gfh_A 121 ILADDVKAMLTELR-K-EVRLLLLTNGDRQTQREKIEACAC--QSY--------FDAIVIGGEQK--------------- 173 (260)
T ss_dssp CCCHHHHHHHHHHH-T-TSEEEEEECSCHHHHHHHHHHHTC--GGG--------CSEEEEGGGSS---------------
T ss_pred CCCcCHHHHHHHHH-c-CCcEEEEECcChHHHHHHHHhcCH--Hhh--------hheEEecCCCC---------------
Confidence 57799999999999 8 599999999999999999999999 320 12223332211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCC-ccCHHHhhhCCc--cEEeCCCChH---HHHhcCCeeeccCChhHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMS-TRDAPSLKEADV--GVSIGERSAQ---FARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG-~ND~~al~~Adv--GIamg~~~~~---~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+--..+.+.+.-..+.++|+||+ .||+.+-+.||+ .|.++ .+.. .....+|+++. ++..+..++
T Consensus 174 -~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~-~~~~~~~~~~~~~~~~i~--~~~el~~~l 249 (260)
T 2gfh_A 174 -EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWIN-KSGRVPLTSSPMPHYMVS--SVLELPALL 249 (260)
T ss_dssp -SCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEEC-TTCCCCSSCCCCCSEEES--SGGGHHHHH
T ss_pred -CCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEc-CCCCCcCcccCCCCEEEC--CHHHHHHHH
Confidence 01112333344445554445789999995 999999999999 57776 3321 12345788877 677776665
Q ss_pred H
Q 043517 740 K 740 (956)
Q Consensus 740 ~ 740 (956)
.
T Consensus 250 ~ 250 (260)
T 2gfh_A 250 Q 250 (260)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00012 Score=74.15 Aligned_cols=100 Identities=7% Similarity=0.013 Sum_probs=65.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHh-cCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAIN-SGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~-~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
++.|++.+.++.|+ +.|+++.++|+........+.+. +|+ ... -..++++....
T Consensus 91 ~~~~~~~~~l~~l~-~~g~~~~i~t~~~~~~~~~~~~~~~~l-~~~---------f~~~~~~~~~~-------------- 145 (206)
T 2b0c_A 91 ALRPEVIAIMHKLR-EQGHRVVVLSNTNRLHTTFWPEEYPEI-RDA---------ADHIYLSQDLG-------------- 145 (206)
T ss_dssp EECHHHHHHHHHHH-HTTCEEEEEECCCCCTTSCCGGGCHHH-HHH---------CSEEEEHHHHT--------------
T ss_pred ccCccHHHHHHHHH-HCCCeEEEEECCChHHHHHHHHhccCh-hhh---------eeeEEEecccC--------------
Confidence 56799999999999 99999999999766554444443 444 111 11122221110
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeC
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIG 712 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg 712 (956)
...-.|+-...+.+.+.-..+.++++||+.||..|.+.||+..++.
T Consensus 146 --~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 191 (206)
T 2b0c_A 146 --MRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 191 (206)
T ss_dssp --CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred --CCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEe
Confidence 0011233344555555555678999999999999999999998876
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0034 Score=61.44 Aligned_cols=138 Identities=12% Similarity=0.033 Sum_probs=80.1
Q ss_pred ccCCceEEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCC-hhhhcccccccccC--C
Q 043517 401 LSLDHANMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVD-GDKMKQNCTVEAFN--I 477 (956)
Q Consensus 401 LT~~~~~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~-~~~~~~~~~~~~F~--s 477 (956)
||+|+|+|.++........ .+ ..++|..+.+++..++| |+.+||++++++..+.+ ... .-.|. +
T Consensus 1 LT~G~p~V~~v~~~~~~~~---~~--~~~lL~laaslE~~SeH--PlA~AIv~~a~~~~~~~~~~~------~~~f~~i~ 67 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVAT---LP--LRKVLAVVGTAEASSEH--PLGVAVTKYCKEELGTETLGY------CTDFQAVP 67 (165)
T ss_dssp CCCCCCCEEEEEECCCTTT---SC--HHHHHHHHHHHHTTSCS--TTHHHHHHHHHHHHTCCCCCC------EEEEEEET
T ss_pred CCCceeEEEEEEeeCCcCC---CC--HHHHHHHHHHHHccCCC--hHHHHHHHHHHHhcCCCCCCC------cCceEEec
Confidence 8999999999876532100 11 23567778888888887 99999999997232432 111 11222 2
Q ss_pred CCCeEEEEEec------------------------CCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHH
Q 043517 478 SKNRAGLLLKW------------------------NGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRD 533 (956)
Q Consensus 478 ~~k~~svv~~~------------------------~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~ 533 (956)
.++..+.+-.. +++...... -+.+.-|+++.+.+... .+++
T Consensus 68 G~Gv~a~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~iGn~~~m~~~gi----------~~~~---- 132 (165)
T 2arf_A 68 GCGIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQ-TFSVLIGNREWLRRNGL----------TISS---- 132 (165)
T ss_dssp TTEEEEEEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCC-EEEEEEECHHHHHHHHC----------SSCH----
T ss_pred CccEEEEEcCcccccccccccccccccccccccccccccccCCC-ceEEEEcCHHHHHhcCC----------CCCH----
Confidence 33333323211 000000011 12345599998754211 1222
Q ss_pred HHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecc
Q 043517 534 AFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKS 585 (956)
Q Consensus 534 ~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d 585 (956)
.+.+.+..+.. +|..++.+|. |..++|++++.|
T Consensus 133 ~~~~~~~~~~~--~G~T~v~va~-----------------dg~~~g~i~l~D 165 (165)
T 2arf_A 133 DVSDAMTDHEM--KGQTAILVAI-----------------DGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHHHHT--TTSEEEEEEE-----------------TTEEEEEEEECC
T ss_pred HHHHHHHHHHh--CCCeEEEEEE-----------------CCEEEEEEEEEC
Confidence 23445566777 9999999997 778999999987
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00059 Score=70.39 Aligned_cols=104 Identities=7% Similarity=-0.073 Sum_probs=72.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHH------HhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIA------INSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSL 659 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia------~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 659 (956)
++.|++.++++.|+ +. +++.++|+.....+..+. +..|+ ... -..++.+.+..
T Consensus 112 ~~~~~~~~~l~~l~-~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l-~~~---------fd~i~~~~~~~--------- 170 (229)
T 4dcc_A 112 DIPTYKLDLLLKLR-EK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKV-EDY---------FEKTYLSYEMK--------- 170 (229)
T ss_dssp CCCHHHHHHHHHHT-TT-SEEEEEECCCHHHHHHHHHHTSCBTTBCH-HHH---------CSEEEEHHHHT---------
T ss_pred hccHHHHHHHHHHH-hc-CcEEEEECCChHHHHHHHhhhhhhccCCH-HHh---------CCEEEeecccC---------
Confidence 36699999999999 88 999999999998888766 55666 211 11222222110
Q ss_pred hhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHH
Q 043517 660 MVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQF 718 (956)
Q Consensus 660 ~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ 718 (956)
...-.|+--..+.+.+.-..+.++++||+.||+.|.+.||++.++. ++.+.
T Consensus 171 -------~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v-~~~~~ 221 (229)
T 4dcc_A 171 -------MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTP-KAGED 221 (229)
T ss_dssp -------CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTTCC
T ss_pred -------CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEE-CCHHH
Confidence 1112334445556666555678999999999999999999999887 44433
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00024 Score=74.68 Aligned_cols=53 Identities=15% Similarity=0.204 Sum_probs=42.8
Q ss_pred hHHHHHHHH-HhcCCeEEEEcC----CccCHHHhhhCCc-cEEeCCCChHHHHhcCCeee
Q 043517 674 DKLLMVQCL-KQKGEVVAVTGM----STRDAPSLKEADV-GVSIGERSAQFARDCSDIVI 727 (956)
Q Consensus 674 ~K~~iv~~l-q~~g~~v~~iGD----G~ND~~al~~Adv-GIamg~~~~~~ak~~Ad~vl 727 (956)
.|..-++.+ .-..+.|+++|| |.||.+||+.|+. |++|| |+.+..|+.||+|.
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLFS 246 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHCC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhcC
Confidence 576666666 112478999999 9999999999988 99999 99999999999874
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0026 Score=71.09 Aligned_cols=136 Identities=18% Similarity=0.138 Sum_probs=85.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcc--eeeechhhhcCCHHHHHhhhcc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDA--AVIEASVFRSSSEETRSLMVDN 663 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~--~~i~g~~~~~~~~~~~~~~~~~ 663 (956)
++.|++.++++.|+ ++|+++.++|+.....+..+.+.+|+ .+. -. .++++.+...- .+....
T Consensus 215 ~l~pGv~elL~~Lk-~~Gi~laIvTn~~~~~~~~~L~~lgL-~~~---------Fd~~~Ivs~ddv~~~-----~~~~~~ 278 (384)
T 1qyi_A 215 RPVDEVKVLLNDLK-GAGFELGIATGRPYTETVVPFENLGL-LPY---------FEADFIATASDVLEA-----ENMYPQ 278 (384)
T ss_dssp SCHHHHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHHHTC-GGG---------SCGGGEECHHHHHHH-----HHHSTT
T ss_pred CcCcCHHHHHHHHH-hCCCEEEEEeCCcHHHHHHHHHHcCC-hHh---------cCCCEEEeccccccc-----cccccc
Confidence 68899999999999 99999999999999999999999999 322 12 45555443210 000000
Q ss_pred ceEEEecChhhHHHHHHHHH--------------hcCCeEEEEcCCccCHHHhhhCCcc-EEeCCCCh------HH-HHh
Q 043517 664 VRVMANASPLDKLLMVQCLK--------------QKGEVVAVTGMSTRDAPSLKEADVG-VSIGERSA------QF-ARD 721 (956)
Q Consensus 664 ~~v~ar~~p~~K~~iv~~lq--------------~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~~------~~-ak~ 721 (956)
..-...-.|+--....+.+. -..+.++|+||+.+|+.+-++||+. |++. .+. +. ...
T Consensus 279 ~kp~~KP~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~ 357 (384)
T 1qyi_A 279 ARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAH 357 (384)
T ss_dssp SCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHT
T ss_pred ccCCCCCCHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhc
Confidence 00001112222122222221 1246899999999999999999986 3443 321 22 234
Q ss_pred cCCeeeccCChhHHHHHHH
Q 043517 722 CSDIVILDENFTTIAANLK 740 (956)
Q Consensus 722 ~Ad~vl~~~~~~~i~~~i~ 740 (956)
.||+++. ++..+...++
T Consensus 358 ~ad~vi~--sl~eL~~~l~ 374 (384)
T 1qyi_A 358 HADYVIN--HLGELRGVLD 374 (384)
T ss_dssp TCSEEES--SGGGHHHHHS
T ss_pred CCCEEEC--CHHHHHHHHH
Confidence 6899987 7777777664
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0028 Score=66.45 Aligned_cols=117 Identities=14% Similarity=0.140 Sum_probs=80.5
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.++.|++.+.++.|+ +.|+++.+.|+.. .+..+.+.+|+ .+. -..++++.+..
T Consensus 115 ~~~~p~~~~ll~~Lk-~~g~~i~i~~~~~--~~~~~L~~~gl-~~~---------Fd~i~~~~~~~-------------- 167 (250)
T 4gib_A 115 NDILPGIESLLIDVK-SNNIKIGLSSASK--NAINVLNHLGI-SDK---------FDFIADAGKCK-------------- 167 (250)
T ss_dssp GGSCTTHHHHHHHHH-HTTCEEEECCSCT--THHHHHHHHTC-GGG---------CSEECCGGGCC--------------
T ss_pred cccchhHHHHHHHHH-hcccccccccccc--hhhhHhhhccc-ccc---------cceeecccccC--------------
Confidence 357799999999999 9999999887764 45677888999 332 23344443221
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc-cEEeCCCChHHHHhcCCeeeccCChhHH
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV-GVSIGERSAQFARDCSDIVILDENFTTI 735 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIamg~~~~~~ak~~Ad~vl~~~~~~~i 735 (956)
...-.|+--..+.+.+.-..+.++++||..+|+.+-+.||+ .|+++ +..+ ...||+++. ++..+
T Consensus 168 --~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~--~~~ad~vi~--~l~eL 232 (250)
T 4gib_A 168 --NNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG-NYEN--LKKANLVVD--STNQL 232 (250)
T ss_dssp --SCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-CTTT--TTTSSEEES--SGGGC
T ss_pred --CCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhH--hccCCEEEC--ChHhC
Confidence 11224444456666666566789999999999999999998 46665 3332 245899987 55444
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.01 Score=62.31 Aligned_cols=39 Identities=8% Similarity=0.028 Sum_probs=35.3
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEc---CCCHHHHHHHHHhcCC
Q 043517 587 YASEVKQAIEDCRESAGIKIKLIL---EDDINIARLIAINSGL 626 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~T---Gd~~~ta~~ia~~~Gi 626 (956)
+-+++.++++.++ +.|+++.++| |+.........+++|+
T Consensus 33 ~~~~~~~a~~~l~-~~G~~~~~~t~~~gr~~~~~~~~l~~~g~ 74 (271)
T 2x4d_A 33 AIAGSVEAVARLK-RSRLKVRFCTNESAASRAELVGQLQRLGF 74 (271)
T ss_dssp ECTTHHHHHHHHH-HSSSEEEEECCCCSSCHHHHHHHHHHTTC
T ss_pred cCcCHHHHHHHHH-HCCCcEEEEECCCCCCHHHHHHHHHHCCC
Confidence 5578899999999 9999999999 9999988888888887
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0078 Score=60.69 Aligned_cols=120 Identities=14% Similarity=0.041 Sum_probs=74.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ +.|+++.++||.....+..+.+ ..+ +. ++++.+..
T Consensus 36 ~~~pg~~e~L~~L~-~~g~~~~i~T~~~~~~~~~~~~-~~~--d~------------v~~~~~~~--------------- 84 (196)
T 2oda_A 36 QLTPGAQNALKALR-DQGMPCAWIDELPEALSTPLAA-PVN--DW------------MIAAPRPT--------------- 84 (196)
T ss_dssp SBCTTHHHHHHHHH-HHTCCEEEECCSCHHHHHHHHT-TTT--TT------------CEECCCCS---------------
T ss_pred CcCcCHHHHHHHHH-HCCCEEEEEcCChHHHHHHhcC-ccC--CE------------EEECCcCC---------------
Confidence 56799999999999 9999999999998887755554 111 21 11111000
Q ss_pred EEEecChhhHHHHHHHHHhc-CCeEEEEcCCccCHHHhhhCCcc-EEeCCCCh--------------------------H
Q 043517 666 VMANASPLDKLLMVQCLKQK-GEVVAVTGMSTRDAPSLKEADVG-VSIGERSA--------------------------Q 717 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~-g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~~--------------------------~ 717 (956)
...-.|+--....+.+.-. .+.++|+||..+|+.+-+.|++- |++. .+. +
T Consensus 85 -~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~-~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 162 (196)
T 2oda_A 85 -AGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA-SCGPLCGLSPSQWQALNNAEREQRRAQATL 162 (196)
T ss_dssp -SCTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES-SSSTTTCCCHHHHHHSCHHHHHHHHHHHHH
T ss_pred -CCCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc-cCCccccccHHHhhhcchhhhhhhHHHHHH
Confidence 0111222223333333322 25799999999999999999973 5553 221 0
Q ss_pred -HHHhcCCeeeccCChhHHHHHHH
Q 043517 718 -FARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 718 -~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
.....+|+++. ++..+..++.
T Consensus 163 ~l~~~~~d~vi~--~~~eL~~~l~ 184 (196)
T 2oda_A 163 KLYSLGVHSVID--HLGELESCLA 184 (196)
T ss_dssp HHHHTTCSEEES--SGGGHHHHHH
T ss_pred HHHHcCCCEEeC--CHHHHHHHHH
Confidence 11235888887 7777777664
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0025 Score=66.84 Aligned_cols=84 Identities=11% Similarity=0.061 Sum_probs=65.1
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHH----HHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhh
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDIN----IARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLM 660 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~----ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 660 (956)
.++.|++.+.++.|+ +.|+++.++||+... .+..-.+++|| +...+ ..
T Consensus 100 ~~~~pg~~ell~~L~-~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi--~~~~~------~~------------------- 151 (260)
T 3pct_A 100 SAAIPGAVEFSNYVN-ANGGTMFFVSNRRDDVEKAGTVDDMKRLGF--TGVND------KT------------------- 151 (260)
T ss_dssp CEECTTHHHHHHHHH-HTTCEEEEEEEEETTTSHHHHHHHHHHHTC--CCCST------TT-------------------
T ss_pred CCCCccHHHHHHHHH-HCCCeEEEEeCCCccccHHHHHHHHHHcCc--Ccccc------ce-------------------
Confidence 567899999999999 999999999999753 77777888999 42100 00
Q ss_pred hccceEEEecChhhHHHHHHHHHhcC-CeEEEEcCCccCHHH
Q 043517 661 VDNVRVMANASPLDKLLMVQCLKQKG-EVVAVTGMSTRDAPS 701 (956)
Q Consensus 661 ~~~~~v~ar~~p~~K~~iv~~lq~~g-~~v~~iGDG~ND~~a 701 (956)
++-|.....|....+.+.+.| .+|+++||..+|.++
T Consensus 152 -----Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 152 -----LLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp -----EEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred -----eEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 444444567888888888854 589999999999987
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0047 Score=65.30 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=36.5
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEc---CCCHHHHHHHHHhcCC
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLIL---EDDINIARLIAINSGL 626 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~T---Gd~~~ta~~ia~~~Gi 626 (956)
.++ ++++++|++++ ++|++++++| |+.........+++|+
T Consensus 21 ~~i-~~~~eal~~l~-~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~ 63 (264)
T 3epr_A 21 SRI-PAGERFIERLQ-EKGIPYMLVTNNTTRTPESVQEMLRGFNV 63 (264)
T ss_dssp EEC-HHHHHHHHHHH-HHTCCEEEEECCCSSCHHHHHHHHHTTTC
T ss_pred EEC-cCHHHHHHHHH-HCCCeEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 345 89999999999 9999999999 8888888888999998
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0025 Score=66.89 Aligned_cols=85 Identities=14% Similarity=0.023 Sum_probs=64.9
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCH----HHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHh
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDI----NIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSL 659 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~----~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 659 (956)
+.++.|++.+.++.|+ +.|+++.++||++. ..+..-.+++|| +.-.+ ..
T Consensus 99 ~~~~~pG~~ell~~L~-~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi--~~~~~------~~------------------ 151 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVN-SHNGKVFYVTNRKDSTEKSGTIDDMKRLGF--NGVEE------SA------------------ 151 (262)
T ss_dssp CCEECTTHHHHHHHHH-HTTEEEEEEEEEETTTTHHHHHHHHHHHTC--SCCSG------GG------------------
T ss_pred CCCCCccHHHHHHHHH-HCCCeEEEEeCCCccchHHHHHHHHHHcCc--Ccccc------cc------------------
Confidence 3567899999999999 99999999999965 466777788999 42000 01
Q ss_pred hhccceEEEecChhhHHHHHHHHHhcC-CeEEEEcCCccCHHH
Q 043517 660 MVDNVRVMANASPLDKLLMVQCLKQKG-EVVAVTGMSTRDAPS 701 (956)
Q Consensus 660 ~~~~~~v~ar~~p~~K~~iv~~lq~~g-~~v~~iGDG~ND~~a 701 (956)
++-|.....|....+.+.+.| ..|+++||..+|.++
T Consensus 152 ------Lilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 152 ------FYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp ------EEEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred ------eeccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 444544456888888888774 589999999999986
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0097 Score=62.88 Aligned_cols=41 Identities=7% Similarity=-0.023 Sum_probs=37.1
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEc---CCCHHHHHHHHHhcCC
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLIL---EDDINIARLIAINSGL 626 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~T---Gd~~~ta~~ia~~~Gi 626 (956)
+++-+++.+++++++ +.|++++++| |+.........+++|+
T Consensus 32 ~~~~~~~~~~l~~l~-~~G~~~~~aTn~~gr~~~~~~~~~~~lg~ 75 (271)
T 1vjr_A 32 DSLLPGSLEFLETLK-EKNKRFVFFTNNSSLGAQDYVRKLRNMGV 75 (271)
T ss_dssp TEECTTHHHHHHHHH-HTTCEEEEEESCTTSCHHHHHHHHHHTTC
T ss_pred CEECcCHHHHHHHHH-HcCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 556688999999999 9999999999 9998888888889988
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0068 Score=61.90 Aligned_cols=95 Identities=15% Similarity=0.064 Sum_probs=61.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+... .+..+.+.+|+ ..- -..++.+.+..
T Consensus 95 ~~~~~~~~~l~~l~-~~g~~~~i~Tn~~~-~~~~~l~~~gl--~~~--------f~~~~~~~~~~--------------- 147 (220)
T 2zg6_A 95 FLYDDTLEFLEGLK-SNGYKLALVSNASP-RVKTLLEKFDL--KKY--------FDALALSYEIK--------------- 147 (220)
T ss_dssp EECTTHHHHHHHHH-TTTCEEEECCSCHH-HHHHHHHHHTC--GGG--------CSEEC---------------------
T ss_pred eECcCHHHHHHHHH-HCCCEEEEEeCCcH-HHHHHHHhcCc--HhH--------eeEEEeccccC---------------
Confidence 46699999999999 99999999999866 47888889998 320 11222221110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCcc-CHHHhhhCCccEEe
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTR-DAPSLKEADVGVSI 711 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~N-D~~al~~AdvGIam 711 (956)
...-.|+--..+.+.+ |..-+++||+.+ |+.+-+.||+....
T Consensus 148 -~~Kp~~~~~~~~~~~~---~~~~~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 148 -AVKPNPKIFGFALAKV---GYPAVHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp ------CCHHHHHHHHH---CSSEEEEESSCCCCCCCSSSCSEEEEE
T ss_pred -CCCCCHHHHHHHHHHc---CCCeEEEcCCchHhHHHHHHCCCeEEE
Confidence 1111222223333333 322299999999 99999999998553
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.014 Score=60.19 Aligned_cols=114 Identities=13% Similarity=0.085 Sum_probs=73.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.| ++.++|+.....+..+.+++|+ ..- +...
T Consensus 96 ~~~~g~~~~l~~l~-~~g-~~~i~Tn~~~~~~~~~l~~~gl--~~~-----------------------------f~~~- 141 (231)
T 2p11_A 96 RVYPGALNALRHLG-ARG-PTVILSDGDVVFQPRKIARSGL--WDE-----------------------------VEGR- 141 (231)
T ss_dssp GBCTTHHHHHHHHH-TTS-CEEEEEECCSSHHHHHHHHTTH--HHH-----------------------------TTTC-
T ss_pred CcCccHHHHHHHHH-hCC-CEEEEeCCCHHHHHHHHHHcCc--HHh-----------------------------cCee-
Confidence 67899999999999 999 9999999999999999999998 320 0000
Q ss_pred EEEecChhhHHHHHHHHH--hcCCeEEEEcCCcc---CHHHhhhCCcc-EEeCCCC-----hHHHHhc--CCeeeccCCh
Q 043517 666 VMANASPLDKLLMVQCLK--QKGEVVAVTGMSTR---DAPSLKEADVG-VSIGERS-----AQFARDC--SDIVILDENF 732 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq--~~g~~v~~iGDG~N---D~~al~~AdvG-Iamg~~~-----~~~ak~~--Ad~vl~~~~~ 732 (956)
+.... .|..+++.+. -..+.++++||+.| |..+-+.||+. |.+. .+ .+..++. +|+++. ++
T Consensus 142 ~~~~~---~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~~~~~~i~--~~ 215 (231)
T 2p11_A 142 VLIYI---HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHPPADVTVE--RI 215 (231)
T ss_dssp EEEES---SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSCCCSEEES--SG
T ss_pred EEecC---ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccCCCceeec--CH
Confidence 11111 2222333332 24578999999999 66666777764 3333 22 2233333 888886 56
Q ss_pred hHHHHHH
Q 043517 733 TTIAANL 739 (956)
Q Consensus 733 ~~i~~~i 739 (956)
..+.+.+
T Consensus 216 ~el~~~l 222 (231)
T 2p11_A 216 GDLVEMD 222 (231)
T ss_dssp GGGGGCG
T ss_pred HHHHHHH
Confidence 6555443
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.57 E-value=0.0022 Score=66.27 Aligned_cols=50 Identities=12% Similarity=0.027 Sum_probs=34.7
Q ss_pred HHHHHhcCCeEEEEcCC-ccCHHHhhhCCccEE---eCCCChHHHH---hcCCeeec
Q 043517 679 VQCLKQKGEVVAVTGMS-TRDAPSLKEADVGVS---IGERSAQFAR---DCSDIVIL 728 (956)
Q Consensus 679 v~~lq~~g~~v~~iGDG-~ND~~al~~AdvGIa---mg~~~~~~ak---~~Ad~vl~ 728 (956)
.+.+.-..+.++++||+ .||++|++.|+++++ +|....+..+ ..+|+++.
T Consensus 186 ~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 186 LNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp HHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred HHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 33333335789999999 799999999999955 4522223333 46888886
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.37 E-value=0.0062 Score=60.20 Aligned_cols=101 Identities=15% Similarity=0.114 Sum_probs=63.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCC---------------CHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILED---------------DINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFR 650 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd---------------~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~ 650 (956)
++.|++.++++.|+ +.|+++.++|+. ....+..+.+++|+ .- ...+.++....
T Consensus 42 ~~~pg~~e~L~~L~-~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl--~f---------d~v~~s~~~~~ 109 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQ-KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV--QF---------DEVLICPHLPA 109 (176)
T ss_dssp CBCTTHHHHHHHHH-HTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC--CE---------EEEEEECCCGG
T ss_pred cCCccHHHHHHHHH-HCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC--Ce---------eEEEEcCCCCc
Confidence 57799999999999 999999999998 46677788888998 31 11212210000
Q ss_pred cCCHHHHHhhhccceEEEecCh--hhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeC
Q 043517 651 SSSEETRSLMVDNVRVMANASP--LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIG 712 (956)
Q Consensus 651 ~~~~~~~~~~~~~~~v~ar~~p--~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg 712 (956)
. -.....| +-=..+.+.+.-..+.++|+||+.+|+.+-+.|++. |.+.
T Consensus 110 ~--------------~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 110 D--------------ECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 160 (176)
T ss_dssp G--------------CCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred c--------------cccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEc
Confidence 0 0001112 211223333433456799999999999999999986 4443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=95.32 E-value=0.014 Score=63.05 Aligned_cols=97 Identities=8% Similarity=-0.097 Sum_probs=67.2
Q ss_pred ecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHH---HHHHHh--------cCCcccCCCCCCCCCCcceeeechhhhc
Q 043517 583 LKSAYASEVKQAIEDCRESAGIKIKLILEDDINIA---RLIAIN--------SGLILKPGAEDHSNGYDAAVIEASVFRS 651 (956)
Q Consensus 583 ~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta---~~ia~~--------~Gi~~~~~~~~~~~~~~~~~i~g~~~~~ 651 (956)
.++++.|++.++++.|+ +.|+++.++||.....+ ...-+. .|+ .. ...+..+. ..
T Consensus 185 ~~~~~~~g~~e~L~~L~-~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~---------~~~~~~~~-~~- 250 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYA-LMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PL---------VMQCQREQ-GD- 250 (301)
T ss_dssp GGCCBCHHHHHHHHHHH-HTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CC---------SEEEECCT-TC-
T ss_pred cccCCChHHHHHHHHHH-HCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--Cc---------hheeeccC-CC-
Confidence 45778999999999999 99999999999985432 333444 677 32 12222111 00
Q ss_pred CCHHHHHhhhccceEEEecChhhHHHHHHHHHhcCC-eEEEEcCCccCHHHhhhCCccE
Q 043517 652 SSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGE-VVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 652 ~~~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~-~v~~iGDG~ND~~al~~AdvGI 709 (956)
.+-.|+-|..+.+.+..... .++|+||..+|+.|-+.|++-.
T Consensus 251 ----------------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 251 ----------------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp ----------------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ----------------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 12246667777777754443 4689999999999999999863
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=94.67 E-value=0.039 Score=60.15 Aligned_cols=118 Identities=14% Similarity=0.123 Sum_probs=72.6
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhc----CCcccCCCCCCCCCCcceeeechhhh--------c
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINS----GLILKPGAEDHSNGYDAAVIEASVFR--------S 651 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~----Gi~~~~~~~~~~~~~~~~~i~g~~~~--------~ 651 (956)
...+.|+..+.++.|+ ++|++|+++||-+..-++.+|..+ || ++. +.+ |..+. .
T Consensus 141 ~~~~~~~~~~l~~~l~-~~G~~v~ivSas~~~~v~~~a~~~~~~ygI--p~e--------~Vi---G~~~~~~~~~~~~~ 206 (327)
T 4as2_A 141 PPRVFSGQRELYNKLM-ENGIEVYVISAAHEELVRMVAADPRYGYNA--KPE--------NVI---GVTTLLKNRKTGEL 206 (327)
T ss_dssp CCEECHHHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHTCGGGSCCC--CGG--------GEE---EECEEEECTTTCCE
T ss_pred ccccCHHHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHhhcccccCC--CHH--------HeE---eeeeeeeccccccc
Confidence 3456799999999999 999999999999999999999984 66 321 111 11110 0
Q ss_pred CC-HHHHHhh------hccceEEEe-----cChhhHHHHHHHHHhcC-CeEEEEcCCc-cCHHHhhh--CCccEEeCCCC
Q 043517 652 SS-EETRSLM------VDNVRVMAN-----ASPLDKLLMVQCLKQKG-EVVAVTGMST-RDAPSLKE--ADVGVSIGERS 715 (956)
Q Consensus 652 ~~-~~~~~~~------~~~~~v~ar-----~~p~~K~~iv~~lq~~g-~~v~~iGDG~-ND~~al~~--AdvGIamg~~~ 715 (956)
.. ..+..+- .....+-.+ +--+.|..-++..-+.| ..+++.||+. .|.+||+. ++.|+++-.+-
T Consensus 207 ~~~~~~~~dg~y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in~ 286 (327)
T 4as2_A 207 TTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNR 286 (327)
T ss_dssp ECHHHHHHTTCCCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEECC
T ss_pred cccccccccccccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEec
Confidence 00 0011110 001111111 22466877777665443 5789999994 79999965 55555544333
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.61 E-value=0.061 Score=56.63 Aligned_cols=96 Identities=18% Similarity=0.225 Sum_probs=66.8
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhc---CCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhh
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINS---GLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMV 661 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~---Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 661 (956)
-++.|++.++++.|+ ++|+++.++|..+...+..+-+.+ |+ .+. -..++++ +.
T Consensus 129 ~~~~~g~~~~L~~L~-~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l-~~~---------fd~i~~~-~~------------ 184 (261)
T 1yns_A 129 AEFFADVVPAVRKWR-EAGMKVYIYSSGSVEAQKLLFGHSTEGDI-LEL---------VDGHFDT-KI------------ 184 (261)
T ss_dssp BCCCTTHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHTBTTBCC-GGG---------CSEEECG-GG------------
T ss_pred cccCcCHHHHHHHHH-hCCCeEEEEeCCCHHHHHHHHHhhcccCh-Hhh---------ccEEEec-CC------------
Confidence 368899999999999 999999999999988888777644 46 221 1112222 11
Q ss_pred ccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 662 DNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 662 ~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
...-.|+-=..+.+.+.-..+.++|+||..+|+.+-+.||+-.
T Consensus 185 -----~~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~ 227 (261)
T 1yns_A 185 -----GHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHV 227 (261)
T ss_dssp -----CCTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEE
T ss_pred -----CCCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 1111233334555555545678999999999999999999853
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.52 E-value=0.024 Score=59.73 Aligned_cols=41 Identities=12% Similarity=0.049 Sum_probs=34.2
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCH---HHHHHHHHhcCC
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDI---NIARLIAINSGL 626 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~---~ta~~ia~~~Gi 626 (956)
.++.|++.++|+.|+ +.|+++.++||+.. ..+....+.+|+
T Consensus 100 ~~~~pg~~e~L~~L~-~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl 143 (258)
T 2i33_A 100 AEALPGSIDFLKYTE-SKGVDIYYISNRKTNQLDATIKNLERVGA 143 (258)
T ss_dssp CEECTTHHHHHHHHH-HTTCEEEEEEEEEGGGHHHHHHHHHHHTC
T ss_pred CCcCccHHHHHHHHH-HCCCEEEEEcCCchhHHHHHHHHHHHcCC
Confidence 467799999999999 99999999999984 444555577898
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=93.65 E-value=0.057 Score=56.02 Aligned_cols=109 Identities=15% Similarity=0.104 Sum_probs=74.2
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+... +..+-+.+|+ ... -..++++.+...
T Consensus 95 ~~~pg~~~ll~~L~-~~g~~i~i~t~~~~--~~~~l~~~gl-~~~---------fd~i~~~~~~~~-------------- 147 (243)
T 4g9b_A 95 AVLPGIRSLLADLR-AQQISVGLASVSLN--APTILAALEL-REF---------FTFCADASQLKN-------------- 147 (243)
T ss_dssp GBCTTHHHHHHHHH-HTTCEEEECCCCTT--HHHHHHHTTC-GGG---------CSEECCGGGCSS--------------
T ss_pred cccccHHHHHHhhh-cccccceecccccc--hhhhhhhhhh-ccc---------cccccccccccC--------------
Confidence 46799999999999 99999999998653 5567788998 332 233444433211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCCCChHHHHhcCCeeec
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGERSAQFARDCSDIVIL 728 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~~~~ak~~Ad~vl~ 728 (956)
..-.|+-=....+.+.-..+.++++||..+|+.+-+.||+- |+++ .|. ..||.++.
T Consensus 148 --~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~-~g~----~~ad~~~~ 204 (243)
T 4g9b_A 148 --SKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIG-AGL----TGAQLLLP 204 (243)
T ss_dssp --CTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEES-TTC----CSCSEEES
T ss_pred --CCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEEC-CCC----CcHHHhcC
Confidence 11234444455556655567899999999999999999974 5555 332 34566554
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=93.57 E-value=0.33 Score=50.27 Aligned_cols=42 Identities=7% Similarity=0.116 Sum_probs=31.8
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEc---CCCHHHHHHHHHhcCC
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLIL---EDDINIARLIAINSGL 626 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~T---Gd~~~ta~~ia~~~Gi 626 (956)
.++.-+++.++++.++ +.|++++++| |+.........+++|+
T Consensus 21 ~~~~~~~~~~ai~~l~-~~G~~~~~~t~~~~~~~~~~~~~l~~~g~ 65 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLR-ATSVMVRFVTNTTKETKKDLLERLKKLEF 65 (259)
T ss_dssp ---CCTTHHHHHHHHH-TSSCEEEEEECCSSCCHHHHHHHHHHTTC
T ss_pred CCEeCcCHHHHHHHHH-HCCCeEEEEeCCCCcCHHHHHHHHHHcCC
Confidence 3444578899999999 9999999999 6666666666667787
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=91.71 E-value=0.033 Score=56.79 Aligned_cols=89 Identities=13% Similarity=0.049 Sum_probs=55.2
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHh----cCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhc
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAIN----SGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVD 662 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~----~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 662 (956)
+.+++.+.++.|+ +.|+++.++|+.....+..+.+. .+. +-. |..
T Consensus 89 ~~~~~~e~l~~L~-~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~-i~~---------------~~~-------------- 137 (211)
T 2b82_A 89 PKEVARQLIDMHV-RRGDAIFFVTGRSPTKTETVSKTLADNFHI-PAT---------------NMN-------------- 137 (211)
T ss_dssp ECHHHHHHHHHHH-HHTCEEEEEECSCCCSSCCHHHHHHHHTTC-CTT---------------TBC--------------
T ss_pred CcHHHHHHHHHHH-HCCCEEEEEcCCcHHHHHHHHHHHHHhcCc-ccc---------------ccc--------------
Confidence 4679999999999 99999999999975433333322 222 100 000
Q ss_pred cceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 663 NVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 663 ~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
...+....|. ...+.+.+++.|- ++++||..+|+.+-+.||+-.
T Consensus 138 -~~~~~~~KP~-p~~~~~~~~~~g~-~l~VGDs~~Di~aA~~aG~~~ 181 (211)
T 2b82_A 138 -PVIFAGDKPG-QNTKSQWLQDKNI-RIFYGDSDNDITAARDVGARG 181 (211)
T ss_dssp -CCEECCCCTT-CCCSHHHHHHTTE-EEEEESSHHHHHHHHHTTCEE
T ss_pred -hhhhcCCCCC-HHHHHHHHHHCCC-EEEEECCHHHHHHHHHCCCeE
Confidence 0011222222 1122333444454 999999999999999999863
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=91.16 E-value=0.13 Score=59.50 Aligned_cols=100 Identities=13% Similarity=0.036 Sum_probs=63.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCC---CHHHHHHHHH-hcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILED---DINIARLIAI-NSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMV 661 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd---~~~ta~~ia~-~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 661 (956)
++.|++.++++.|+ +.|+++.++|+. .......+.. ..|+ ... -..++++.++..
T Consensus 100 ~~~~~~~~~L~~L~-~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l-~~~---------fd~i~~~~~~~~---------- 158 (555)
T 3i28_A 100 KINRPMLQAALMLR-KKGFTTAILTNTWLDDRAERDGLAQLMCEL-KMH---------FDFLIESCQVGM---------- 158 (555)
T ss_dssp EECHHHHHHHHHHH-HTTCEEEEEECCCCCCSTTHHHHHHHHHHH-HTT---------SSEEEEHHHHTC----------
T ss_pred CcChhHHHHHHHHH-HCCCEEEEEeCCCccccchhhHHHHHhhhh-hhh---------eeEEEeccccCC----------
Confidence 57899999999999 999999999996 1111111111 1144 111 223444433221
Q ss_pred ccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeC
Q 043517 662 DNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIG 712 (956)
Q Consensus 662 ~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg 712 (956)
..-.|+--..+.+.+.-..+.++++||..||+.+.+.|++....-
T Consensus 159 ------~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 159 ------VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp ------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred ------CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 112233344555555555678999999999999999999987654
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=90.69 E-value=0.15 Score=54.90 Aligned_cols=54 Identities=9% Similarity=0.024 Sum_probs=38.1
Q ss_pred CCeEEEEcCCc-cCHHHhhhCCccEEe---CCCChHHHH---------hcCCeeeccCChhHHHHHHHH
Q 043517 686 GEVVAVTGMST-RDAPSLKEADVGVSI---GERSAQFAR---------DCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 686 g~~v~~iGDG~-ND~~al~~AdvGIam---g~~~~~~ak---------~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.+.++|+||+. ||+.|.+.|++..++ |.+..+..+ ..+|+++. ++..+...+++
T Consensus 232 ~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~--~l~el~~~l~~ 298 (306)
T 2oyc_A 232 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVE--SIADLTEGLED 298 (306)
T ss_dssp GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEES--SGGGGGGGC--
T ss_pred hHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEEC--CHHHHHHHHHh
Confidence 46899999996 999999999998776 322222222 36889887 77777766544
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=88.84 E-value=0.0072 Score=60.52 Aligned_cols=40 Identities=3% Similarity=-0.015 Sum_probs=35.1
Q ss_pred cCcHHHHHHHHHHHhhC-CCEEEEEcCCCHHHHHHHHHhcCC
Q 043517 586 AYASEVKQAIEDCRESA-GIKIKLILEDDINIARLIAINSGL 626 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~-Gi~v~m~TGd~~~ta~~ia~~~Gi 626 (956)
++.|++.++++.|+ +. |+++.++|+.....+..+.+++|+
T Consensus 73 ~~~~g~~e~L~~L~-~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 73 EPIPGALDAVREMN-DLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CBCTTHHHHHHHHH-TSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred ccCcCHHHHHHHHH-hCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 57799999999999 99 999999999988777777777776
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=88.09 E-value=0.51 Score=44.53 Aligned_cols=39 Identities=10% Similarity=0.007 Sum_probs=34.0
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCC---HHHHHHHHHhcCC
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDD---INIARLIAINSGL 626 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~---~~ta~~ia~~~Gi 626 (956)
+-+++.++|++++ +.|++++++|||+ ...+....++.|+
T Consensus 25 ~~~~~~~al~~l~-~~G~~iii~TgR~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQ-QEKHRLILWSVREGELLDEAIEWCRARGL 66 (142)
T ss_dssp BCTTHHHHHHHHH-HTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cCHHHHHHHHHHH-HCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence 3468999999999 9999999999998 5667777888898
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=86.14 E-value=0.38 Score=50.13 Aligned_cols=41 Identities=7% Similarity=0.098 Sum_probs=33.9
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHh----cCC
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAIN----SGL 626 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~----~Gi 626 (956)
++.-+++.++++.++ +.|+++.++||+...+...++++ +|+
T Consensus 20 ~~~~~~~~~~l~~l~-~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~ 64 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQ-EKDLPFLFVTNNTTKSPETVAQRLANEFDI 64 (264)
T ss_dssp TEECHHHHHHHHHHH-HTTCCEEEEECCCSSCHHHHHHHHHHHSCC
T ss_pred CEECcCHHHHHHHHH-HCCCeEEEEeCCCCCCHHHHHHHHHHhcCC
Confidence 333478999999999 99999999999988777776664 887
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=84.67 E-value=0.83 Score=51.50 Aligned_cols=39 Identities=10% Similarity=0.215 Sum_probs=33.1
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCC------------HHHHHHHHHhcCC
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDD------------INIARLIAINSGL 626 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~------------~~ta~~ia~~~Gi 626 (956)
+-|++.++++.|+ ++|+++.++|+.. ...+..+.+++|+
T Consensus 88 ~~pgv~e~L~~L~-~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl 138 (416)
T 3zvl_A 88 LYPEIPKKLQELA-AEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV 138 (416)
T ss_dssp SCTTHHHHHHHHH-HTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS
T ss_pred hcccHHHHHHHHH-HCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC
Confidence 6799999999999 9999999999965 2236777888897
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=83.94 E-value=3.2 Score=40.19 Aligned_cols=101 Identities=5% Similarity=-0.004 Sum_probs=61.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCC---CHH---HHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHh
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILED---DIN---IARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSL 659 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd---~~~---ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 659 (956)
++.|++.+.++.|+ +. +++.++|+. ... +...+.+..|. ... ...+++|..
T Consensus 69 ~~~pg~~e~L~~L~-~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~-~~~---------~~~i~~~~~----------- 125 (180)
T 3bwv_A 69 DVMPHAQEVVKQLN-EH-YDIYIATAAMDVPTSFHDKYEWLLEYFPF-LDP---------QHFVFCGRK----------- 125 (180)
T ss_dssp CBCTTHHHHHHHHT-TT-SEEEEEECC--CCSHHHHHHHHHHHHCTT-SCG---------GGEEECSCG-----------
T ss_pred CCCcCHHHHHHHHH-hc-CCEEEEeCCCCcchHHHHHHHHHHHHcCC-CCc---------ccEEEeCCc-----------
Confidence 57899999999999 84 999999997 211 12224444555 222 233334332
Q ss_pred hhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 660 MVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 660 ~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
.| + +.++++||..+|+. +.|+-.|++. .+... ...++.++. ++..+..++
T Consensus 126 --------------~~------l----~~~l~ieDs~~~i~--~aaG~~i~~~-~~~~~-~~~~~~~i~--~~~el~~~l 175 (180)
T 3bwv_A 126 --------------NI------I----LADYLIDDNPKQLE--IFEGKSIMFT-ASHNV-YEHRFERVS--GWRDVKNYF 175 (180)
T ss_dssp --------------GG------B----CCSEEEESCHHHHH--HCSSEEEEEC-CGGGT-TCCSSEEEC--SHHHHHHHH
T ss_pred --------------Ce------e----cccEEecCCcchHH--HhCCCeEEeC-CCccc-CCCCceecC--CHHHHHHHH
Confidence 01 1 45789999999985 5677556664 33221 134666665 666666555
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=81.98 E-value=1.6 Score=45.53 Aligned_cols=91 Identities=5% Similarity=0.006 Sum_probs=58.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhc--C---------CcccCCCCCCCCCCcceeeechhhhcCCH
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINS--G---------LILKPGAEDHSNGYDAAVIEASVFRSSSE 654 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~--G---------i~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 654 (956)
++.|++.++++ . |+++.++|..+...+..+-+.+ | + ..- -....+.
T Consensus 125 ~~~pgv~e~L~----~-g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l--~~~--------~~~~f~~-------- 181 (253)
T 2g80_A 125 PVYADAIDFIK----R-KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDL--NSY--------IDGYFDI-------- 181 (253)
T ss_dssp CCCHHHHHHHH----H-CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCC--GGG--------CCEEECH--------
T ss_pred CCCCCHHHHHH----c-CCEEEEEeCCCHHHHHHHHHhhcccccccccccch--Hhh--------cceEEee--------
Confidence 56788877765 4 8999999999999888887776 4 3 110 0000000
Q ss_pred HHHHhhhccceE-EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 655 ETRSLMVDNVRV-MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 655 ~~~~~~~~~~~v-~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
. + -..-.|+--..+.+.+.-..+.++++||..+|+.+-++||+-.
T Consensus 182 -~---------~~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 182 -N---------TSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp -H---------HHCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred -e---------ccCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 0 0 0111233334455555545578999999999999999999864
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=80.62 E-value=1.4 Score=48.46 Aligned_cols=47 Identities=11% Similarity=0.070 Sum_probs=36.1
Q ss_pred EEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCC----HHHHHHHHHhcCC
Q 043517 579 GLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDD----INIARLIAINSGL 626 (956)
Q Consensus 579 Gli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~----~~ta~~ia~~~Gi 626 (956)
|.+.-.+.+=|++.++++.|+ +.|++++++|+.. ...+..+.+.+|+
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~-~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi 72 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLN-RNKIPYILLTNGGGFSERARTEFISSKLDV 72 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHH-HTTCCEEEECSCCSSCHHHHHHHHHHHHTS
T ss_pred CeeEcCCeeCcCHHHHHHHHH-HCCCEEEEEeCCCCCCchHHHHHHHHhcCC
Confidence 333444566689999999999 9999999999875 3445556667898
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 956 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 8e-19 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-09 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 5e-18 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-13 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 2e-11 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 3e-10 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-08 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 3e-08 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-08 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 88.2 bits (218), Expect = 8e-19
Identities = 40/246 (16%), Positives = 78/246 (31%), Gaps = 38/246 (15%)
Query: 740 KWGRCVCNNIRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALAL 799
GR + NN+++FI+ ++ N + A L P QLLWVNL+ D L A AL
Sbjct: 226 TLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATAL 285
Query: 800 AA--PVSLRVQLPAHATAAASASPLANKTVWRNIILQVLYQVFVL--------------- 842
P + P + PL + ++ + Y
Sbjct: 286 GFNPPDLDIMDRPPRSPKE----PLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGP 341
Query: 843 -------------SATQLKGNELLQVQANKTDLKAIVFNSFVLCQVFVLINAREIEALNI 889
+ L + + + V ++ +N+ +
Sbjct: 342 GVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLM 401
Query: 890 FEGKGLHQNPWFLVIVGFIFILDIAV--IEMVTVVTHGTRMDLKDWCVCIGIAVMTLPTG 947
N W L + L + ++ + ++ +DL W + + I++ +
Sbjct: 402 R--MPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLD 459
Query: 948 LVAKCI 953
+ K I
Sbjct: 460 EILKFI 465
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 58.9 bits (142), Expect = 1e-09
Identities = 23/168 (13%), Positives = 58/168 (34%), Gaps = 25/168 (14%)
Query: 37 IQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIK 96
+ A + G++ +++ R + +G N L L+ + +
Sbjct: 9 TEECLAYFGVSETTGLTPDQVK--RHLEKYGHNELP--------AEEGKSLWELVIEQFE 58
Query: 97 DSTVILLLCCATLSLLLGIKRNGFEQGILDGAMVFVVISSVVCISSLFRFVKNWINE-LL 155
D V +LL A +S +L G E + + VI ++ +++ + E +
Sbjct: 59 DLLVRILLLAACISFVLAWFEEGEE--TITAFVEPFVILLILIANAIVGVWQERNAENAI 116
Query: 156 VSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCLQTGDQVPADGLFV 203
+ + AA + + +++ + G+Q+ +
Sbjct: 117 EALKEYEPAATEQDKTPLQQKL------------DEFGEQLSKVISLI 152
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 80.2 bits (197), Expect = 5e-18
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 590 EVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVF 649
EV +I+ CR+ AGI++ +I D+ A I G+ + F
Sbjct: 24 EVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRIGIF------GENEEVADRAYTGREF 76
Query: 650 RSSSEETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709
+ A P K +V+ L+ E+ A+TG DAP+LK+A++G+
Sbjct: 77 DDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGI 136
Query: 710 SIGERSAQFARDCSDIVILDENFTTIAANLKWG 742
++G +A A+ S++V+ D+NF+TI A ++ G
Sbjct: 137 AMGSGTAV-AKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 71.4 bits (174), Expect = 1e-13
Identities = 45/359 (12%), Positives = 100/359 (27%), Gaps = 37/359 (10%)
Query: 381 LPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREA---IAT 437
L LGL + I +D + + +KS + + I
Sbjct: 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHL 89
Query: 438 TSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDN 497
+ D+ ++ E +++ + N + L L++ + G N
Sbjct: 90 IDILKKLSHDEIEAFMYQDEPVELKLQNISTN----LADCFNLNEQLPLQFLDNVKVGKN 145
Query: 498 SVH-IHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFAC 556
+++ + + L ++ + +
Sbjct: 146 NIYAALEEFATTELHVSDA---TLFSLKGALWTLAQEVY--------------QEWYLGS 188
Query: 557 KRVEQQNEEEIIELTECGLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINI 616
K E ++ + G + ++ EVK + D + AG ++ +
Sbjct: 189 KLYEDVEKKIARTTFKTGYIYQEIILR---PVDEVKVLLNDLKG-AGFELGIATGRPYTE 244
Query: 617 ARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRS-LMVDNVRVMANASPLDK 675
+ N GL+ A+ + D E ++ + N +
Sbjct: 245 TVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYES 304
Query: 676 LLMVQCLKQKGEVVAVTGMSTRDAPSLKEAD---VGVSIGERSAQFARDCS----DIVI 727
+ Q + V + G S D S ++ +G G + A + D VI
Sbjct: 305 YINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI 363
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 62.6 bits (151), Expect = 2e-11
Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 28/213 (13%)
Query: 378 ARNLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFIKSTSADVLDALREAIAT 437
+ L + A+C + D + ++ AT+ +
Sbjct: 44 SGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLV-------------- 89
Query: 438 TSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEA---FNISKNRAGLLLKWNGSESD 494
++ V + + L E + ++Q E F+ + + S
Sbjct: 90 ---EKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRA 146
Query: 495 GDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISF 554
+ +G+PE ++ C + T + ++ + I++ +LRC++
Sbjct: 147 -AVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 204
Query: 555 ACKRVEQQNEE------EIIELTECGLTWLGLV 581
A + + EE E LT++G+V
Sbjct: 205 ATRDTPPKREEMVLDDSSRFMEYETDLTFVGVV 237
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 56.3 bits (135), Expect = 3e-10
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 27/113 (23%)
Query: 166 VKVMRDGR--VRQIAVSEVVVGDVVCLQTGDQVPADGLFVHGKNLKL------------- 210
KV R R V++I ++V GD+V + GD+VPAD + K+ L
Sbjct: 3 GKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVS 62
Query: 211 ------------DDGDDKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLL 251
DK +F+G + G+ +V + G +TE + +
Sbjct: 63 VIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 53.3 bits (127), Expect = 2e-08
Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 18/142 (12%)
Query: 450 ALLLWAKEFLDVDGDKMKQNCTVEA---FNISKNRAGLLLKWNGSESDGDNSVHIHWRGS 506
ALL E KM+ A FN + + + D S + +G+
Sbjct: 71 ALLKCI-ELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHERE----DNPQSHVLVMKGA 125
Query: 507 PEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQN--- 563
PE IL C+ L G LD+ +DAF N E R + F +
Sbjct: 126 PERILDRCSSILV-QGKEIPLDKEMQDAFQNAYL--ELGGLGERVLGFCQLNLPSGKFPR 182
Query: 564 ----EEEIIELTECGLTWLGLV 581
+ + + L ++GL+
Sbjct: 183 GFKFDTDELNFPTEKLCFVGLM 204
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 53.1 bits (126), Expect = 3e-08
Identities = 12/92 (13%), Positives = 33/92 (35%), Gaps = 1/92 (1%)
Query: 660 MVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFA 719
+N K ++ L + + + + G S D + K +D+ +
Sbjct: 135 PHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNEC 193
Query: 720 RDCSDIVILDENFTTIAANLKWGRCVCNNIRK 751
R+ + + ++F I ++ + V ++
Sbjct: 194 REQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 50.5 bits (120), Expect = 5e-08
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 628 LKPGAED-----HSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASPLDKLLMVQCL 682
LK A+ G +I +RS+ +R L +D V P K V+ L
Sbjct: 22 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL--PHQKSEEVKKL 79
Query: 683 KQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLK 740
Q EVVA G DAP+L +AD+G+++G + A + DIV++ ++ + A ++
Sbjct: 80 -QAKEVVAFVGDGINDAPALAQADLGIAVGS-GSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 956 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.97 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.94 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.92 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.9 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.82 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.81 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.35 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.28 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.25 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.23 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.21 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.14 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.11 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.1 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.06 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.96 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.87 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.85 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.82 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.8 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.79 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.62 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.18 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.07 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.01 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.61 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.39 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.37 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.33 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.31 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.24 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.01 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.99 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.68 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.59 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.47 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 96.39 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.3 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.97 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.74 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.68 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.44 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.98 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.95 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.86 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.69 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.66 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.38 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 93.6 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.18 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 93.07 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 92.99 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 91.4 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 90.76 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 89.16 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 88.63 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 84.31 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.6e-38 Score=366.56 Aligned_cols=425 Identities=17% Similarity=0.209 Sum_probs=337.4
Q ss_pred hhCCHHHHHHHhCCCCCCCCCCcHHHHHHHHhccCCCccccccccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 043517 33 QSGRIQAIAASLETNLDIGISGQEMELRRRRQVFGSNGLTLSLENNCKHPASLHFGRLISDSIKDSTVILLLCCATLSLL 112 (956)
Q Consensus 33 ~~~~~~~~~~~l~~~~~~GLs~~~~e~~~r~~~~G~N~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ll~~~~ls~~ 112 (956)
|..++||+++.|+||+++|||+ +|+++|+++||+|+++ +++++|+|+.+++||++|+.++++++++++++
T Consensus 5 h~~~~e~v~~~l~td~~~GLs~--~ea~~r~~~~G~N~l~--------~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~ 74 (472)
T d1wpga4 5 HSKSTEECLAYFGVSETTGLTP--DQVKRHLEKYGHNELP--------AEEGKSLWELVIEQFEDLLVRILLLAACISFV 74 (472)
T ss_dssp GGSCHHHHHHHHTCCTTTCBCH--HHHHHHHHHSCCSSCC--------CCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHH
T ss_pred hhCCHHHHHHHhCcCcccCcCH--HHHHHHHHhcCCCCCC--------CCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 4468999999999999999999 9999999999999999 78899999999999999999999999999999
Q ss_pred hccccCCC--cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCcEEEEECCEEEEEEccccccCcEEEe
Q 043517 113 LGIKRNGF--EQGILDGAMVFVVISSVVCISSLFRFVKNWINELLVSKRTSRRAAVKVMRDGRVRQIAVSEVVVGDVVCL 190 (956)
Q Consensus 113 ~~~~~~~~--~~~~~~~~~i~~~~l~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l 190 (956)
.+....+. ...|.++++++++++++..++.++|++++++.+++ +...+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l---~~~~~~~------------------------- 126 (472)
T d1wpga4 75 LAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEAL---KEYEPAA------------------------- 126 (472)
T ss_dssp HHHTSCTTSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHH---GGGSCCC-------------------------
T ss_pred HHHHhcccccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHH---hhhcccc-------------------------
Confidence 88744333 34689999999999999999999999999999988 2322211
Q ss_pred CCCCcccccEEEEeeCCceecccCCCCCeEeeccEEeeeeEEEEEEEecCcChHHHHHHhhcccccccccCCCCChhHHH
Q 043517 191 QTGDQVPADGLFVHGKNLKLDDGDDKLPCIFTGAKVVGGECSMLVTSVGENTETSMLMKLLSKDDRINRQDYKESKLQIS 270 (956)
Q Consensus 191 ~~G~~vPaD~~ll~g~~l~vdes~~~~~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~~~~~s~l~~~ 270 (956)
..| +++|.|++
T Consensus 127 ~~~---------------------------------------------------------------------~~~P~d~~ 137 (472)
T d1wpga4 127 TEQ---------------------------------------------------------------------DKTPLQQK 137 (472)
T ss_dssp CCC---------------------------------------------------------------------CCCHHHHH
T ss_pred ccc---------------------------------------------------------------------cCchHHHH
Confidence 112 34566667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCcccchhhhhhhhhHHHhhccCcchhHHHHHHHHHHHHH
Q 043517 271 VDRMGSRMEKIWLSLSLLVIVVQVLGCFAWGDDDHDPEPKGGVRSTVKEIMGEVVTKFIRRQGATSHNRYVEMLSILVFV 350 (956)
Q Consensus 271 ~~~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ll~~~ 350 (956)
+++.+..+.....+.+...+...+.+.. ..-....|. ..++ +.+..++++++++
T Consensus 138 l~~~g~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------~~~~----------------~~~~~ai~l~V~~ 191 (472)
T d1wpga4 138 LDEFGEQLSKVISLICVAVWLINIGHFN---DPVHGGSWI-------RGAI----------------YYFKIAVALAVAA 191 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCTTSS---SCCSSSCSS-------SCGG----------------GHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhhhH-------HHHH----------------HHHHHHHHHHHHh
Confidence 7777666666555555544443211110 011112222 1344 7889999999999
Q ss_pred cCCCchhHHHHHHHHHHHhhcccCCcccccccccccccceeEEeeCccc--cccCCceEEEEEEecCcccccCCCCHHHH
Q 043517 351 SRDGLLPIGLFICLAYASKKLPCFRATARNLPVCSSLGLVTAICTGKTS--DLSLDHANMAELWIATDNSFIKSTSADVL 428 (956)
Q Consensus 351 iP~~~L~~~~~~~~~~~~~~l~~~~ilvk~~~~~e~lg~v~~i~~DKTG--TLT~~~~~v~~i~~~~~~~~~~~~~~~~~ 428 (956)
+|+| ||+++++++++|++||+|+|++||+++++|++|+..+.|+|||- |||.|
T Consensus 192 iPEg-Lp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n------------------------ 246 (472)
T d1wpga4 192 IPEG-LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSN------------------------ 246 (472)
T ss_dssp SCTT-HHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHH------------------------
T ss_pred Chhh-HHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhh------------------------
Confidence 9999 99999999999999999999999999999999998888888761 11100
Q ss_pred HHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchH
Q 043517 429 DALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPE 508 (956)
Q Consensus 429 ~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e 508 (956)
T Consensus 247 -------------------------------------------------------------------------------- 246 (472)
T d1wpga4 247 -------------------------------------------------------------------------------- 246 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeecccCc
Q 043517 509 IILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSAYA 588 (956)
Q Consensus 509 ~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~lr 588 (956)
T Consensus 247 -------------------------------------------------------------------------------- 246 (472)
T d1wpga4 247 -------------------------------------------------------------------------------- 246 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEE
Q 043517 589 SEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMA 668 (956)
Q Consensus 589 ~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~a 668 (956)
T Consensus 247 -------------------------------------------------------------------------------- 246 (472)
T d1wpga4 247 -------------------------------------------------------------------------------- 246 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhhhHHHH
Q 043517 669 NASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGRCVCNN 748 (956)
Q Consensus 669 r~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR~~~~~ 748 (956)
T Consensus 247 -------------------------------------------------------------------------------- 246 (472)
T d1wpga4 247 -------------------------------------------------------------------------------- 246 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHhhhhHHhHHhhccCcc--ccccCcccccCCCCCCCCcchH
Q 043517 749 IRKFIQLHLTVNAAAFAVNLVAAIFCGEIPLEPFQLLWVNLIMDVLGALALAAPVS--LRVQLPAHATAAASASPLANKT 826 (956)
Q Consensus 749 i~~~~~~~l~~ni~~~~~~~~~~~~~~~~pl~~~q~l~~~~~~~~~~~l~l~~~~~--~~~~~p~ly~p~~~~~~l~~~~ 826 (956)
+..+...+++.++..+.|++|+|+||+|+++|.+|++++++||| ++|++ ||++++++++++.
T Consensus 247 ------------~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~----~Pr~~~~~li~~~ 310 (472)
T d1wpga4 247 ------------VGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDR----PPRSPKEPLISGW 310 (472)
T ss_dssp ------------HHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGS----CCCCTTCCSSCTH
T ss_pred ------------HHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcC----CCCCCCccccCHH
Confidence 00011222355667789999999999999999999999999999 99999 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccc----------------------------cccccchhHHHHHHHHHHHHHH
Q 043517 827 VWRNIILQVLYQVFVLSATQLKGNELLQVQ----------------------------ANKTDLKAIVFNSFVLCQVFVL 878 (956)
Q Consensus 827 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~t~~f~~l~~~~~~~~ 878 (956)
++..++.++.+.....+..+++...+.... .....++|++|++++++|+++.
T Consensus 311 ~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~ 390 (472)
T d1wpga4 311 LFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNA 390 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHHHHHH
Confidence 999999888888776665544432111000 1234578999999999999999
Q ss_pred HHHhhccccccccccCCCchhHHHHHHHHHHHHHHHHHHH--HHhhccccCCChhhHHHHHHHHHHHHHHHHHHhhc
Q 043517 879 INAREIEALNIFEGKGLHQNPWFLVIVGFIFILDIAVIEM--VTVVTHGTRMDLKDWCVCIGIAVMTLPTGLVAKCI 953 (956)
Q Consensus 879 ~~~~~~~~~~~f~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~i~k~~ 953 (956)
+++|+.+ .+.|+ .++++|++++.++++++++++++++. ++.+|++.|+++.+|+++++++++.++++|++||+
T Consensus 391 ~~~rs~~-~s~~~-~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~ 465 (472)
T d1wpga4 391 LNSLSEN-QSLMR-MPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 465 (472)
T ss_dssp HTTSCSS-CCTTT-SCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHhcCC-cchhh-cCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999854 55676 68899999999999999888887754 88899999999999999999999999999999986
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=2.2e-31 Score=262.14 Aligned_cols=150 Identities=27% Similarity=0.428 Sum_probs=141.9
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
||||++++++|+.|+ ++||+++|+|||+..||.++|+++|| +..+. +-....++|.+++.++..++.+..++.
T Consensus 19 Dp~R~~~~~~I~~l~-~~GI~v~miTGD~~~tA~~ia~~~Gi-~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (168)
T d1wpga2 19 DPPRKEVMGSIQLCR-DAGIRVIMITGDNKGTAIAICRRIGI-FGENE-----EVADRAYTGREFDDLPLAEQREACRRA 91 (168)
T ss_dssp CCBCTTHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHHTTS-SCTTC-----CCTTTEEEHHHHHHSCHHHHHHHHHHC
T ss_pred CCCchhHHHHHHHHH-HCcCEEEEECCCCHHHHHHHHHHcCC-CCCcc-----ccccccccccccchhhHHHHhhhhhhh
Confidence 999999999999999 99999999999999999999999999 55432 113557899999999999999999999
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHh
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWG 742 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~g 742 (956)
.+|+|++|++|..+++.+|+.|++|+|+|||.||++||++|||||||+ ++++.|+++||+++.+++|..+.++|+||
T Consensus 92 ~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 92 CCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999 89999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.94 E-value=2.9e-27 Score=223.09 Aligned_cols=127 Identities=28% Similarity=0.410 Sum_probs=111.3
Q ss_pred CcEEEEEeeecccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCC
Q 043517 574 GLTWLGLVRLKSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSS 653 (956)
Q Consensus 574 ~l~~lGli~~~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~ 653 (956)
|.+..+.++++|++|++++++|+.|+ ++||+++|+|||+..+|.++|+++|| +.
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~-~~Gi~v~ilTGD~~~~a~~ia~~lgI--~~----------------------- 62 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELK-RMGIKVGMITGDNWRSAEAISRELNL--DL----------------------- 62 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHHHTC--SE-----------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHH-HcCCEEEEEcCcchhhhhHHHhhhhh--hh-----------------------
Confidence 34455678999999999999999999 99999999999999999999999999 65
Q ss_pred HHHHHhhhccceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChh
Q 043517 654 EETRSLMVDNVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFT 733 (956)
Q Consensus 654 ~~~~~~~~~~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~ 733 (956)
+|++++|++|.++++.+|+. ++|+|+|||.||+|||++||+||||+ ++++.++++||+++.++++.
T Consensus 63 ------------v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~ 128 (135)
T d2b8ea1 63 ------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLR 128 (135)
T ss_dssp ------------EECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTH
T ss_pred ------------hccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHH
Confidence 99999999999999998865 69999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHH
Q 043517 734 TIAANLK 740 (956)
Q Consensus 734 ~i~~~i~ 740 (956)
.|+++|+
T Consensus 129 ~i~~aI~ 135 (135)
T d2b8ea1 129 DVVAAIQ 135 (135)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998874
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.92 E-value=2.1e-25 Score=229.79 Aligned_cols=177 Identities=17% Similarity=0.220 Sum_probs=140.5
Q ss_pred eEEEEEEecCcccccCC----------CCHHHHHHHHHHHHhcCCCCC---------------CCCcHHHHHHHHHhhcC
Q 043517 406 ANMAELWIATDNSFIKS----------TSADVLDALREAIATTSYDEA---------------AVDDDDALLLWAKEFLD 460 (956)
Q Consensus 406 ~~v~~i~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~~~---------------~~p~e~Al~~~~~~~~~ 460 (956)
|+|+++|.++..+..+. ..+...+.|..++++|+++.. .+|+|.||+.++. +.|
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~-~~~ 80 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIE-LSC 80 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHH-HHH
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHH-HhC
Confidence 88999998876553211 234455667788889988753 3589999999999 889
Q ss_pred CChhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHH
Q 043517 461 VDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNN 537 (956)
Q Consensus 461 ~~~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~ 537 (956)
.+....++.++ .+||+|++|+|+++++..++ ++. +++|+|||||.|+++|+++.. +|...+|+++.++.+.+
T Consensus 81 ~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~---~~~-~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~ 155 (214)
T d1q3ia_ 81 GSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDN---PQS-HVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQN 155 (214)
T ss_dssp SCHHHHHHTSCEEEEEC------CEEEEEECSSC---TTS-EEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHH
T ss_pred CCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCC---CCc-eeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHH
Confidence 99888887776 99999999999999987542 145 889999999999999999886 78899999999999999
Q ss_pred HHHHHhhccccceeeeeEEeeccccchHH-------HHhhhccCcEEEEEeeecccCcHH
Q 043517 538 FIRDIEANHHSLRCISFACKRVEQQNEEE-------IIELTECGLTWLGLVRLKSAYASE 590 (956)
Q Consensus 538 ~~~~~~~~~~G~rvl~~A~k~~~~~~~~~-------~~~~~e~~l~~lGli~~~d~lr~~ 590 (956)
.+++|+. +|+||||+|||.++.++... ..+..|+||+|+|+++++||||++
T Consensus 156 ~~~~~a~--~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 156 AYLELGG--LGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHHHHHH--TTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred HHHHHhh--CCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 9999999 99999999999997654221 245568999999999999999974
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.90 E-value=1.5e-29 Score=284.27 Aligned_cols=318 Identities=13% Similarity=0.031 Sum_probs=214.2
Q ss_pred cccccccccceeEEeeCccccccCCceEEEEEEecCccccc--CCCCHHHHHHHHHHHHhcCC----CCCCCCcHHHHHH
Q 043517 380 NLPVCSSLGLVTAICTGKTSDLSLDHANMAELWIATDNSFI--KSTSADVLDALREAIATTSY----DEAAVDDDDALLL 453 (956)
Q Consensus 380 ~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~----~~~~~p~e~Al~~ 453 (956)
-+.+.|.||..+++|+|||||+|.++|++..+......+.. ..++.+ .+++ .+.++|+. ....+|.+.+++.
T Consensus 29 ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~-~dl~-~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (380)
T d1qyia_ 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSN-WDML-FIVFSIHLIDILKKLSHDEIEAFMY 106 (380)
T ss_dssp HHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCH-HHHH-HHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HhhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChh-HHHH-HHHHHHHHHHHHhhcCCCcHHHHHH
Confidence 34567999999999999999999999977543322110000 001111 1221 11111211 1222356777765
Q ss_pred HHHhhcCCChhhhccccc---ccccCCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHH
Q 043517 454 WAKEFLDVDGDKMKQNCT---VEAFNISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEH 530 (956)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~---~~~F~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~ 530 (956)
..+ ..+......++.+. .+||++.+++|++.....+ +. +..+.||+++.+. +++.
T Consensus 107 ~~~-~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~-----~~-~~~~~~~a~~~~~---------------~~~~ 164 (380)
T d1qyia_ 107 QDE-PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN-----NI-YAALEEFATTELH---------------VSDA 164 (380)
T ss_dssp CSS-CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHH-----HH-HHHHHHHHHHHTT---------------CSCC
T ss_pred HHh-hccchHHHHHHhccccccCCcchHHHHHhhhccccc-----ch-hHhhhhccHhhcC---------------CcHH
Confidence 544 33333344444443 7899999999988765433 22 3344566665542 2333
Q ss_pred HHHHHHHHHHHHhhccccceeeeeEEeeccccchHHHHhhhccCcEEEEEeeeccc--CcHHHHHHHHHHHhhCCCEEEE
Q 043517 531 KRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEEIIELTECGLTWLGLVRLKSA--YASEVKQAIEDCRESAGIKIKL 608 (956)
Q Consensus 531 ~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~e~~l~~lGli~~~d~--lr~~~~~~I~~l~~~~Gi~v~m 608 (956)
.+.++.+.+..++. +|+|++++|++..+..+ .....+....|++..+++ ||++++++++.|+ ++|++++|
T Consensus 165 ~~~~~~~~~~~~a~--~~~r~l~~~~~~~~~~~-----~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk-~aGi~v~i 236 (380)
T d1qyia_ 165 TLFSLKGALWTLAQ--EVYQEWYLGSKLYEDVE-----KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLK-GAGFELGI 236 (380)
T ss_dssp GGGSTTCHHHHHHH--HHHHHHHHHHHHHHHHH-----CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHH-HTTCEEEE
T ss_pred HHHHHHhHHHHHHH--HHHHHHHHhhhcccccc-----cccchhhHhcccccccccccchhhHHHHHHHHH-HCCCeEEE
Confidence 45566778888999 99999999997553221 122334556789999998 5569999999999 99999999
Q ss_pred EcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHH---------HHhhhccceEEEecChhhHHHHH
Q 043517 609 ILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEET---------RSLMVDNVRVMANASPLDKLLMV 679 (956)
Q Consensus 609 ~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~---------~~~~~~~~~v~ar~~p~~K~~iv 679 (956)
+|||+..+|..+++++|+ .+... ...+++|.+........ -...+.....++|.+|++|..++
T Consensus 237 ~Tg~~~~~a~~il~~lgl-~~~F~-------~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv 308 (380)
T d1qyia_ 237 ATGRPYTETVVPFENLGL-LPYFE-------ADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINK 308 (380)
T ss_dssp ECSSCHHHHHHHHHHHTC-GGGSC-------GGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHC
T ss_pred ECCCCHHHHHHHHHHcCC-cccCC-------cceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999999 43211 33456666542211100 00112223367899999999999
Q ss_pred HHHHhcCCeEEEEcCCccCHHHhhhCC---ccEEeCCCChHHHHh----cCCeeeccCChhHHHHHH
Q 043517 680 QCLKQKGEVVAVTGMSTRDAPSLKEAD---VGVSIGERSAQFARD----CSDIVILDENFTTIAANL 739 (956)
Q Consensus 680 ~~lq~~g~~v~~iGDG~ND~~al~~Ad---vGIamg~~~~~~ak~----~Ad~vl~~~~~~~i~~~i 739 (956)
+.++..++.|+|+|||.||++|+|.|| |||+||..+++..++ .||+++. ++..+.+++
T Consensus 309 ~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~--~~~el~~il 373 (380)
T d1qyia_ 309 QDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--HLGELRGVL 373 (380)
T ss_dssp CTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--SGGGHHHHH
T ss_pred HHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 999999999999999999999999999 999999777765544 7999996 777777664
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.82 E-value=1.4e-20 Score=196.82 Aligned_cols=152 Identities=17% Similarity=0.214 Sum_probs=120.6
Q ss_pred HHHHHHHHHHhcCCCCC------------CCCcHHHHHHHHHhhcCCChhhhc----------------cccc---cccc
Q 043517 427 VLDALREAIATTSYDEA------------AVDDDDALLLWAKEFLDVDGDKMK----------------QNCT---VEAF 475 (956)
Q Consensus 427 ~~~~l~~~~~~~~~~~~------------~~p~e~Al~~~~~~~~~~~~~~~~----------------~~~~---~~~F 475 (956)
..+.+..++++||++.. .+|+|.||+.++. +.|++....+ +.++ ++||
T Consensus 49 ~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~-k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF 127 (239)
T d1wpga3 49 GLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVE-KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF 127 (239)
T ss_dssp HHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHH-HHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHH-HhCCChHHhhccchhhhhccchhhhhhhCeEEEEeee
Confidence 34556677889988642 3589999999999 8888665432 2232 7899
Q ss_pred CCCCCeEEEEEecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHH--hhccccceeee
Q 043517 476 NISKNRAGLLLKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDI--EANHHSLRCIS 553 (956)
Q Consensus 476 ~s~~k~~svv~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~G~rvl~ 553 (956)
+|+||||+|+++.+++....+. +.+|+|||||.|+++|+++.. ++...+++++.++.+.+.++++ |+ +|+||||
T Consensus 128 ~S~rK~Msvv~~~~~~~~~~~~-~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~--~glRvLa 203 (239)
T d1wpga3 128 SRDRKSMSVYCSPAKSSRAAVG-NKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGR--DTLRCLA 203 (239)
T ss_dssp ETTTTEEEEEEEESSGGGGGGC-SEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSS--CCCEEEE
T ss_pred cccccEEEEEEEcCCCCcccce-eEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhh--CCCEEEE
Confidence 9999999999987653111123 679999999999999998876 6777899999999999999987 66 9999999
Q ss_pred eEEeeccccchHH------HHhhhccCcEEEEEeee
Q 043517 554 FACKRVEQQNEEE------IIELTECGLTWLGLVRL 583 (956)
Q Consensus 554 ~A~k~~~~~~~~~------~~~~~e~~l~~lGli~~ 583 (956)
+|||+++..+... ..+.+|+||+|+|++++
T Consensus 204 ~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 204 LATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred EEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 9999997654321 35678999999999986
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.81 E-value=1.1e-20 Score=171.56 Aligned_cols=87 Identities=30% Similarity=0.497 Sum_probs=79.1
Q ss_pred cEEEEECCEE--EEEEccccccCcEEEeCCCCcccccEEEEe--eCCceecccC-----------------------CCC
Q 043517 165 AVKVMRDGRV--RQIAVSEVVVGDVVCLQTGDQVPADGLFVH--GKNLKLDDGD-----------------------DKL 217 (956)
Q Consensus 165 ~~~V~Rdg~~--~~I~~~~Lv~GDiV~l~~G~~vPaD~~ll~--g~~l~vdes~-----------------------~~~ 217 (956)
.++|+|+|++ ++|+++||||||+|.|++||+|||||+|++ +.++.||||+ ++.
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 6899999985 789999999999999999999999999986 4457899999 246
Q ss_pred CeEeeccEEeeeeEEEEEEEecCcChHHHHHHhh
Q 043517 218 PCIFTGAKVVGGECSMLVTSVGENTETSMLMKLL 251 (956)
Q Consensus 218 ~~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 251 (956)
|++|+||.|.+|+++++|++||.+|.+|||++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 7899999999999999999999999999998764
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.35 E-value=1.2e-12 Score=134.22 Aligned_cols=145 Identities=17% Similarity=0.149 Sum_probs=105.2
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhh----------------
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVF---------------- 649 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~---------------- 649 (956)
.+.+.+.++|++|+ ++|++++++|||+...+..+++.+++ ... ..+-+|..+
T Consensus 19 ~i~~~~~~~l~~l~-~~gi~v~~~TGR~~~~~~~~~~~~~~--~~~---------~i~~~g~~~~~~~~~~~~~~~~~~~ 86 (230)
T d1wr8a_ 19 MIHEKALEAIRRAE-SLGIPIMLVTGNTVQFAEAASILIGT--SGP---------VVAEDGGAISYKKKRIFLASMDEEW 86 (230)
T ss_dssp CBCHHHHHHHHHHH-HTTCCEEEECSSCHHHHHHHHHHHTC--CSC---------EEEGGGTEEEETTEEEESCCCSHHH
T ss_pred ccCHHHHHHHHHHH-hCCCeEEEEeCCcHHHHHHHHHhcCC--Ccc---------cccccceeeeccccccccccccHHH
Confidence 46789999999999 99999999999999999999999888 321 011111100
Q ss_pred ------------------------------hcCCHHHHHhhhc----cce-------EEEecChhhHHHHHHHHHhc---
Q 043517 650 ------------------------------RSSSEETRSLMVD----NVR-------VMANASPLDKLLMVQCLKQK--- 685 (956)
Q Consensus 650 ------------------------------~~~~~~~~~~~~~----~~~-------v~ar~~p~~K~~iv~~lq~~--- 685 (956)
.....+.+.++.. ... +-.......|...++.+.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i 166 (230)
T d1wr8a_ 87 ILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGI 166 (230)
T ss_dssp HHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhcccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhccccccccc
Confidence 0011122222211 111 12222345677777776554
Q ss_pred -CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHhh
Q 043517 686 -GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWGR 743 (956)
Q Consensus 686 -g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~gR 743 (956)
.+.++++|||.||.+|++.||+||||+ |+.+.+|+.||+|+.+++.+++.+++++..
T Consensus 167 ~~~~~~~iGD~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 167 KPKEVAHVGDGENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp CGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred chhheeeeecCccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHHH
Confidence 467999999999999999999999999 999999999999999999999999887643
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.28 E-value=9.1e-12 Score=127.78 Aligned_cols=144 Identities=15% Similarity=0.113 Sum_probs=104.0
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhh--------------
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFR-------------- 650 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~-------------- 650 (956)
.++.+++.+++++|+ +.|++++++|||+...+..+++.+|+ +.. .+..+|..+.
T Consensus 19 ~~i~~~~~~al~~l~-~~g~~v~~~TGr~~~~~~~~~~~~~~--~~~---------~i~~~G~~~~~~~~~~~~~~~~~~ 86 (225)
T d1l6ra_ 19 RLISTKAIESIRSAE-KKGLTVSLLSGNVIPVVYALKIFLGI--NGP---------VFGENGGIMFDNDGSIKKFFSNEG 86 (225)
T ss_dssp SCBCHHHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHHHTC--CSC---------EEEGGGTEEECTTSCEEESSCSHH
T ss_pred CcCCHHHHHHHHHHH-HCCCEEEEEcCCchhhhHHHHHHcCC--Cce---------EEeecceEEEeCCccEEEecChHH
Confidence 456789999999999 99999999999999999999999998 331 1111111100
Q ss_pred -----------------------------cCC---HHHHHhhhcc--ceE-----EEecC--hhhHHHHHHHHHhc----
Q 043517 651 -----------------------------SSS---EETRSLMVDN--VRV-----MANAS--PLDKLLMVQCLKQK---- 685 (956)
Q Consensus 651 -----------------------------~~~---~~~~~~~~~~--~~v-----~ar~~--p~~K~~iv~~lq~~---- 685 (956)
... .+.+...... ..+ ..... ...|...++.+.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~ 166 (225)
T d1l6ra_ 87 TNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLE 166 (225)
T ss_dssp HHHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccc
Confidence 000 0111111111 111 11222 34788888777554
Q ss_pred CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 686 GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 686 g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.+.|+++|||.||.+|++.||+||||+ |+.+.+|+.||+++..++..+|.+++++
T Consensus 167 ~~~v~~~GDs~nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 167 YDEILVIGDSNNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGGEEEECCSGGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred hhheeeecCCcchHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 356999999999999999999999999 9999999999999999999999999875
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.25 E-value=9.9e-12 Score=132.09 Aligned_cols=67 Identities=25% Similarity=0.277 Sum_probs=60.8
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|..-++.+.++ .+.|+++|||.||.+||+.|+.|+||+ |+.+.+|+.||+++.+++.+++.++|++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 698888888765 357999999999999999999999999 9999999999999999999999999864
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.23 E-value=7.9e-12 Score=131.82 Aligned_cols=71 Identities=20% Similarity=0.165 Sum_probs=62.3
Q ss_pred ecChh--hHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 669 NASPL--DKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 669 r~~p~--~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
..+|. .|..-++.+.++ | +.|+++|||.||.+||+.|+.|+||+ |+.+.+|+.|++|+.+++.++++++|+
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 34453 598888888665 3 57999999999999999999999999 999999999999999999999999886
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.21 E-value=2.2e-11 Score=128.39 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=60.6
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
+|...++.+.+. ...++++|||.||.+||+.|+.|+||+ |+.+.+|+.|++++.+++.+++++++++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~~ 267 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 267 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHHH
Confidence 698888888765 357999999999999999999999999 9999999999999999999999998863
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.14 E-value=2.3e-11 Score=127.62 Aligned_cols=67 Identities=19% Similarity=0.222 Sum_probs=60.7
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ .+.++++|||.||.+||+.||.|+||+ ||.+.+|+.||+|+.+++.++++++|++
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 688888777654 468999999999999999999999999 9999999999999999999999999875
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.11 E-value=1e-10 Score=123.19 Aligned_cols=67 Identities=25% Similarity=0.326 Sum_probs=59.9
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.|...++.+.++ ...|+++|||.||.+||+.||+||||+ |+.+.+|+.||+++.+++.++++++|++
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~~ 260 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLER 260 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHTT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 688877777654 356999999999999999999999999 9999999999999999999999998864
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.10 E-value=1.4e-10 Score=113.58 Aligned_cols=100 Identities=18% Similarity=0.219 Sum_probs=83.6
Q ss_pred HHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceEEEecCh
Q 043517 593 QAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRVMANASP 672 (956)
Q Consensus 593 ~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ar~~p 672 (956)
.+|+.|+ +.|+.+.++||+....+...++++++ .. ++...
T Consensus 39 ~gi~~l~-~~gi~~~iis~~~~~~v~~~~~~l~~--~~-----------------------------------~~~~~-- 78 (177)
T d1k1ea_ 39 LGIKMLM-DADIQVAVLSGRDSPILRRRIADLGI--KL-----------------------------------FFLGK-- 78 (177)
T ss_dssp HHHHHHH-HTTCEEEEEESCCCHHHHHHHHHHTC--CE-----------------------------------EEESC--
T ss_pred HHHHHHh-hhcEEEEEecCCchhHHHHHHhhhcc--cc-----------------------------------ccccc--
Confidence 4899999 99999999999999999999999999 43 34333
Q ss_pred hhHHHHHHHHHh-c---CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChh
Q 043517 673 LDKLLMVQCLKQ-K---GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFT 733 (956)
Q Consensus 673 ~~K~~iv~~lq~-~---g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~ 733 (956)
.+|...++.+.+ . .+.|+++||+.||.+||+.|++|+||+ ++.+.+|+.||+|+..+.=.
T Consensus 79 ~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~ 142 (177)
T d1k1ea_ 79 LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGK 142 (177)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTT
T ss_pred ccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCC
Confidence 345555544433 2 478999999999999999999999999 99999999999999877633
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.06 E-value=1.4e-10 Score=122.63 Aligned_cols=66 Identities=20% Similarity=0.214 Sum_probs=54.3
Q ss_pred hHHHHHHHHHhc----CCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccC-ChhHHHHHHH
Q 043517 674 DKLLMVQCLKQK----GEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDE-NFTTIAANLK 740 (956)
Q Consensus 674 ~K~~iv~~lq~~----g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~-~~~~i~~~i~ 740 (956)
.|...++.+.+. .+.|+++|||.||.+||+.||+|+||+ ||.+.+|+.||+++.++ +..++.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 566666665543 368999999999999999999999999 99999999999999754 5556777764
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=5.1e-10 Score=113.86 Aligned_cols=130 Identities=14% Similarity=0.117 Sum_probs=91.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+++|++.+.|+.|+ +.|++++++||.....+..+++.+|+ +... .. .+.-....+|.......
T Consensus 82 ~l~pg~~~~i~~lk-~~G~~~~ivS~~~~~~v~~i~~~lgi--~~~~-v~-an~~~~~~~G~~~g~~~------------ 144 (217)
T d1nnla_ 82 HLTPGIRELVSRLQ-ERNVQVFLISGGFRSIVEHVASKLNI--PATN-VF-ANRLKFYFNGEYAGFDE------------ 144 (217)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHHHTTC--CGGG-EE-EECEEECTTSCEEEECT------------
T ss_pred ccCHHHHHHHHHHH-hCCCEEEEECCCchHHHHHHHHHhCC--cccc-ee-eeeeeeeehhcccccee------------
Confidence 36899999999999 99999999999999999999999999 4310 00 00000000111000000
Q ss_pred EEEecChhhHHHHHHHHHhc--CCeEEEEcCCccCHHHhhhCCccEEeCCC-ChHHHHhcCCeeeccCChhH
Q 043517 666 VMANASPLDKLLMVQCLKQK--GEVVAVTGMSTRDAPSLKEADVGVSIGER-SAQFARDCSDIVILDENFTT 734 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~--g~~v~~iGDG~ND~~al~~AdvGIamg~~-~~~~ak~~Ad~vl~~~~~~~ 734 (956)
......+..|.++++.++++ .+.++++|||.||.+|++.||++||++.+ .....++.||+++. +|..
T Consensus 145 ~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~e 214 (217)
T d1nnla_ 145 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 214 (217)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred eeeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHH
Confidence 00013456799999998764 35799999999999999999999999733 34566778999886 5544
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.87 E-value=1.6e-09 Score=110.36 Aligned_cols=147 Identities=10% Similarity=-0.019 Sum_probs=103.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+++|++.+.++.|+ +.|+++.++|+.....+..+.+++|+ .+.-. .......+...... .......
T Consensus 75 ~l~pg~~~~l~~L~-~~g~~~~ivS~~~~~~i~~~l~~l~~-~~~~~------an~~~~~~~~~~~~------~~~~~~~ 140 (226)
T d2feaa1 75 KIREGFREFVAFIN-EHEIPFYVISGGMDFFVYPLLEGIVE-KDRIY------CNHASFDNDYIHID------WPHSCKG 140 (226)
T ss_dssp CBCTTHHHHHHHHH-HHTCCEEEEEEEEHHHHHHHHTTTSC-GGGEE------EEEEECSSSBCEEE------CTTCCCT
T ss_pred chhHHHHHHHHHHH-hcccccccCCcchhhhHHHHHHHcCC-cccee------eeeEEEeCCcceec------ccccccc
Confidence 47899999999999 99999999999999999999999998 32100 00011111110000 0000011
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhc-CCeeeccCChhHHHHHHHHhhh
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDC-SDIVILDENFTTIAANLKWGRC 744 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~-Ad~vl~~~~~~~i~~~i~~gR~ 744 (956)
..+..+|+.|..+++.++..++.|+|+||+.||.+|++.||+++|++ ...+.+++. .+++ .-++|+.|...+++-..
T Consensus 141 ~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~-~~~d~~~i~~~l~~~~~ 218 (226)
T d2feaa1 141 TCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHL-PYQDFYEIRKEIENVKE 218 (226)
T ss_dssp TCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEE-CCSSHHHHHHHHHTSHH
T ss_pred ccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCee-ecCCHHHHHHHHHHHHH
Confidence 34456888999999999999999999999999999999999999998 555555443 4443 34589999888877555
Q ss_pred HHHH
Q 043517 745 VCNN 748 (956)
Q Consensus 745 ~~~~ 748 (956)
....
T Consensus 219 ~~~~ 222 (226)
T d2feaa1 219 VQEW 222 (226)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.85 E-value=7.2e-09 Score=103.28 Aligned_cols=130 Identities=12% Similarity=0.073 Sum_probs=94.1
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
..++....++.+ +.+.+.+++|+.............++ ... ......... ......
T Consensus 70 ~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~--~~~--------~~~~l~~~~------------~~~~~~ 125 (206)
T d1rkua_ 70 PLEGAVEFVDWL--RERFQVVILSDTFYEFSQPLMRQLGF--PTL--------LCHKLEIDD------------SDRVVG 125 (206)
T ss_dssp CCTTHHHHHHHH--HTTSEEEEEEEEEHHHHHHHHHHTTC--CCE--------EEEEEEECT------------TSCEEE
T ss_pred ccchHHHHHHHh--hcCceEEEeccCchHHHHHHHHHhCC--chh--------hcceeeeec------------cccccc
Confidence 445666666554 56789999999999999999999998 321 011000000 001113
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHHHh
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLKWG 742 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~g 742 (956)
.....+..+...++.++...+.|+|+|||.||++||+.||+||||+ +..++.++++|+++. +++..+.++|.+.
T Consensus 126 ~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 126 YQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLKA 199 (206)
T ss_dssp EECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHHH
Confidence 4445666677888888888999999999999999999999999996 777777888899876 4677788776653
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.82 E-value=3e-09 Score=109.86 Aligned_cols=69 Identities=17% Similarity=0.087 Sum_probs=58.9
Q ss_pred hhhHHHHHHHHHhc-C---CeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCC-------eeeccCChhHHHHHHH
Q 043517 672 PLDKLLMVQCLKQK-G---EVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD-------IVILDENFTTIAANLK 740 (956)
Q Consensus 672 p~~K~~iv~~lq~~-g---~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad-------~vl~~~~~~~i~~~i~ 740 (956)
...|...++.+.+. | +.|+++|||.||.+||+.||.|+||+ |+.+.+|+.|| ++...++..++.++|+
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 45698888888776 2 56999999999999999999999999 99999998888 5677777888888876
Q ss_pred H
Q 043517 741 W 741 (956)
Q Consensus 741 ~ 741 (956)
+
T Consensus 239 ~ 239 (244)
T d1s2oa1 239 H 239 (244)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.80 E-value=2.5e-09 Score=106.92 Aligned_cols=130 Identities=12% Similarity=0.074 Sum_probs=92.7
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.++.+++.+.++.++ ..|..++++||.....+....++.++ ... ........... ..
T Consensus 74 ~~~~~~~~~~i~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~------------~~ 130 (210)
T d1j97a_ 74 ITPTEGAEETIKELK-NRGYVVAVVSGGFDIAVNKIKEKLGL--DYA--------FANRLIVKDGK------------LT 130 (210)
T ss_dssp CCBCTTHHHHHHHHH-HTTCEEEEEEEEEHHHHHHHHHHHTC--SEE--------EEEEEEEETTE------------EE
T ss_pred hhhhhhHHHHHHHHH-HcCCEEEeecccccccccchhhccch--hhh--------hhhhhcccccc------------cc
Confidence 367788999999999 99999999999999999999999888 320 01111110000 00
Q ss_pred eEEEe--cChhhHHHHH----HHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHH
Q 043517 665 RVMAN--ASPLDKLLMV----QCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAAN 738 (956)
Q Consensus 665 ~v~ar--~~p~~K~~iv----~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~ 738 (956)
..... ..+..|...+ +.++-..+.++++|||.||.+|++.||+|||| |+.+..++.||+++.++|+++|.++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~ 208 (210)
T d1j97a_ 131 GDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKY 208 (210)
T ss_dssp EEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGG
T ss_pred ccccccccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHH
Confidence 00111 1122333333 33333356899999999999999999999999 6788899999999999999998876
Q ss_pred H
Q 043517 739 L 739 (956)
Q Consensus 739 i 739 (956)
|
T Consensus 209 l 209 (210)
T d1j97a_ 209 I 209 (210)
T ss_dssp C
T ss_pred h
Confidence 5
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.79 E-value=3.8e-09 Score=108.48 Aligned_cols=42 Identities=12% Similarity=0.070 Sum_probs=38.1
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCC
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGL 626 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi 626 (956)
.+...+.++++|++|+ ++|++++++|||+...+..+.+++|+
T Consensus 15 ~~~~~~~~~~ai~~l~-~~G~~~~~aTGR~~~~~~~~~~~~~~ 56 (243)
T d1wzca1 15 PGYEPDPAKPIIEELK-DMGFEIIFNSSKTRAEQEYYRKELEV 56 (243)
T ss_dssp SSSCSGGGHHHHHHHH-HTTEEEEEECSSCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHhcc
Confidence 3444577899999999 99999999999999999999999998
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.62 E-value=6e-08 Score=98.28 Aligned_cols=40 Identities=13% Similarity=0.022 Sum_probs=37.6
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCC
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGL 626 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi 626 (956)
.+.+.+++++++|+ ++|+.++++|||+...+..+.+++|+
T Consensus 21 ~i~~~~~~al~~l~-~~Gi~~~i~TGR~~~~~~~~~~~~~~ 60 (232)
T d1xvia_ 21 YDWQPAAPWLTRLR-EANVPVILCSSKTSAEMLYLQKTLGL 60 (232)
T ss_dssp CSCCTTHHHHHHHH-HTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHH-HCCCEEEEEeCCChhhchhHHHHhcc
Confidence 36678999999999 99999999999999999999999998
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.18 E-value=5.9e-07 Score=91.09 Aligned_cols=55 Identities=20% Similarity=0.289 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHhc-CCeEEEEcC----CccCHHHhhhCC-ccEEeCCCChHHHHhcCCeeec
Q 043517 673 LDKLLMVQCLKQK-GEVVAVTGM----STRDAPSLKEAD-VGVSIGERSAQFARDCSDIVIL 728 (956)
Q Consensus 673 ~~K~~iv~~lq~~-g~~v~~iGD----G~ND~~al~~Ad-vGIamg~~~~~~ak~~Ad~vl~ 728 (956)
-.|...++.|.+. .+.|+++|| |.||.+||+.|+ .|+||+ |+.+.+|..+|++++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFP 244 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCT
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcCC
Confidence 3688888888664 568999999 569999999997 699999 999999999998863
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.07 E-value=2.4e-06 Score=85.79 Aligned_cols=62 Identities=11% Similarity=0.249 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 673 LDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 673 ~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
..|...++.+.++ +.++++||+.||.+||+.|+.|+||+ +|. .+..|++.+. +...+.+.++
T Consensus 158 ~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~--~~~ev~~~l~ 219 (229)
T d1u02a_ 158 VNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHVA--DYIEMRKILK 219 (229)
T ss_dssp CCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEES--SHHHHHHHHH
T ss_pred CCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEE-eCC--CCccCeEEcC--CHHHHHHHHH
Confidence 4699999999876 46789999999999999997776664 332 2467899887 3444555443
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=1.1e-05 Score=74.41 Aligned_cols=132 Identities=14% Similarity=0.200 Sum_probs=89.3
Q ss_pred EEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhh-hcccccccccCCCCCeEEEE
Q 043517 407 NMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDK-MKQNCTVEAFNISKNRAGLL 485 (956)
Q Consensus 407 ~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~-~~~~~~~~~F~s~~k~~svv 485 (956)
+++++++.+... ..++|..|++.+..++| |+.+||+++|+++.+..... -.......||....+..++.
T Consensus 3 q~td~ip~~G~~--------~~ell~~AA~aE~~SeH--PlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 72 (136)
T d2a29a1 3 QASEFIPAQGVD--------EKTLADAAQLASLADET--PEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN 72 (136)
T ss_dssp EEEEEEECTTCC--------HHHHHHHHHHHHHTCCS--HHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE
T ss_pred CcceEEeCCCCC--------HHHHHHHHHHHhCCCCc--hHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE
Confidence 368888876542 24777888888877776 99999999998433332211 11112256777776665554
Q ss_pred EecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchH
Q 043517 486 LKWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEE 565 (956)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~ 565 (956)
+. ++ .+.+|++..+.+..... |. .+ .+++.+.+++++. +|.+++.+|.
T Consensus 73 ~~--------g~---~v~~G~~~~~~~~~~~~----g~--~~----~~~~~~~~~~~~~--~G~Tvv~Va~--------- 120 (136)
T d2a29a1 73 ID--------NR---MIRKGSVDAIRRHVEAN----GG--HF----PTDVDQKVDQVAR--QGATPLVVVE--------- 120 (136)
T ss_dssp ET--------TE---EEEEECHHHHHHHHHHH----TC--CC----CHHHHHHHHHHHH--TTSEEEEEEE---------
T ss_pred EC--------CE---EEEecHHHHHHHHHHHc----CC--CC----cHHHHHHHHHHHH--CCCeEEEEEE---------
Confidence 42 22 45679998886554321 11 11 3467778888999 9999999997
Q ss_pred HHHhhhccCcEEEEEeeecccCc
Q 043517 566 EIIELTECGLTWLGLVRLKSAYA 588 (956)
Q Consensus 566 ~~~~~~e~~l~~lGli~~~d~lr 588 (956)
|..++|++++.|++|
T Consensus 121 --------d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 121 --------GSRVLGVIALKDIVK 135 (136)
T ss_dssp --------TTEEEEEEEEEESSC
T ss_pred --------CCEEEEEEEEEeecC
Confidence 789999999999986
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.61 E-value=4.5e-05 Score=76.54 Aligned_cols=123 Identities=15% Similarity=0.092 Sum_probs=82.5
Q ss_pred CcHHHHHHHHHHHhhCC-CEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 587 YASEVKQAIEDCRESAG-IKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~G-i~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
+-|++.+++++|+ +.| +++.++|+.....+..+.++.|+ ..- -..++.+.+..
T Consensus 92 ~~~g~~~~L~~L~-~~g~~~~~v~t~~~~~~~~~~l~~~gl--~~~--------fd~i~~~~~~~--------------- 145 (228)
T d2hcfa1 92 LLEGVRELLDALS-SRSDVLLGLLTGNFEASGRHKLKLPGI--DHY--------FPFGAFADDAL--------------- 145 (228)
T ss_dssp ECTTHHHHHHHHH-TCTTEEEEEECSSCHHHHHHHHHTTTC--STT--------CSCEECTTTCS---------------
T ss_pred ecCchHHHHhhhh-ccccccccccCCCcchhhhhhhhhhcc--ccc--------ccccccccccc---------------
Confidence 4589999999999 876 89999999999999999999999 431 11222221110
Q ss_pred EEEecCh--hhHHHHHHHHHh---cCCeEEEEcCCccCHHHhhhCCc---cEEeCCCChHH-HHhcCCeeeccCChhHHH
Q 043517 666 VMANASP--LDKLLMVQCLKQ---KGEVVAVTGMSTRDAPSLKEADV---GVSIGERSAQF-ARDCSDIVILDENFTTIA 736 (956)
Q Consensus 666 v~ar~~p--~~K~~iv~~lq~---~g~~v~~iGDG~ND~~al~~Adv---GIamg~~~~~~-ak~~Ad~vl~~~~~~~i~ 736 (956)
.-.| +.-...++.+.. ..+.++||||+.+|..|-+.|++ +|+.|....+. .+..||+++. +++.+.
T Consensus 146 ---~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~ 220 (228)
T d2hcfa1 146 ---DRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETD 220 (228)
T ss_dssp ---SGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHH
T ss_pred ---cccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHH
Confidence 1112 111223333332 23689999999999999999995 44445333333 4446899987 777777
Q ss_pred HHHH
Q 043517 737 ANLK 740 (956)
Q Consensus 737 ~~i~ 740 (956)
++|.
T Consensus 221 ~~l~ 224 (228)
T d2hcfa1 221 EVLA 224 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.39 E-value=0.00012 Score=72.54 Aligned_cols=119 Identities=13% Similarity=0.106 Sum_probs=82.9
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.|++.++++.|+ +.|+++.++|+.+...+..+.+.+|+ ..- -..++++++..
T Consensus 89 ~~pg~~~~l~~L~-~~g~~~~i~T~~~~~~~~~~l~~~~l--~~~--------F~~i~~~~~~~---------------- 141 (218)
T d1te2a_ 89 LLPGVREAVALCK-EQGLLVGLASASPLHMLEKVLTMFDL--RDS--------FDALASAEKLP---------------- 141 (218)
T ss_dssp BCTTHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHTTC--GGG--------CSEEEECTTSS----------------
T ss_pred ccchHHHHHHHhh-hccccccccccccccccccccccccc--ccc--------ccccccccccc----------------
Confidence 5699999999999 99999999999999999999999999 430 22333332221
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE-EeC--CCChHHHHhcCCeeeccCChhH
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV-SIG--ERSAQFARDCSDIVILDENFTT 734 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI-amg--~~~~~~ak~~Ad~vl~~~~~~~ 734 (956)
.+.-.|+--..+++.+.-..+.++++||+.+|..|-+.||+.. .+. ....+.....||+++. ++..
T Consensus 142 ~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~--~l~e 210 (218)
T d1te2a_ 142 YSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTE 210 (218)
T ss_dssp CCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGG
T ss_pred cchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEEC--Chhh
Confidence 1122334445666666666789999999999999999999753 332 1112222346788876 5543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.37 E-value=7e-05 Score=74.48 Aligned_cols=124 Identities=13% Similarity=0.132 Sum_probs=86.4
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.|++.+.++.|+ +.|+++.++|+.....+..+.+++|+ ... -..++.+.+..
T Consensus 96 l~~~~~~~L~~L~-~~g~~~~i~tn~~~~~~~~~l~~~gl--~~~--------f~~~~~~~~~~---------------- 148 (224)
T d2hsza1 96 LYPNVKETLEALK-AQGYILAVVTNKPTKHVQPILTAFGI--DHL--------FSEMLGGQSLP---------------- 148 (224)
T ss_dssp ECTTHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHHTTC--GGG--------CSEEECTTTSS----------------
T ss_pred hHHHHHHHHHHHh-ccCCcccccccccHHHHHHHHHhcCc--hhh--------ccccccccccc----------------
Confidence 5799999999999 99999999999999999999999999 431 11122211110
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc-cEEeC--CC-ChHHHHhcCCeeeccCChhHHHHHH
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV-GVSIG--ER-SAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIamg--~~-~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+--..+.+.++-..+.++|+||..+|..+-+.||+ .|.+. .+ ..+.....+|+++. ++..+.++|
T Consensus 149 ~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ii 223 (224)
T d2hsza1 149 EIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKIT 223 (224)
T ss_dssp SCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGGT
T ss_pred cccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHHhh
Confidence 01123444455666666667899999999999999999997 34443 11 12234456898887 777666543
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=4.6e-05 Score=76.59 Aligned_cols=39 Identities=13% Similarity=0.048 Sum_probs=31.8
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcC
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSG 625 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~G 625 (956)
..+-+.++++|++|+ +.|+ ++++||++...+.....+.+
T Consensus 19 ~~i~~~~~~al~~l~-~~g~-~~i~Tgr~~~~~~~~~~~~~ 57 (243)
T d2amya1 19 QKITKEMDDFLQKLR-QKIK-IGVVGGSDFEKVQEQLGNDV 57 (243)
T ss_dssp SCCCHHHHHHHHHHT-TTSE-EEEECSSCHHHHHHHHCTTH
T ss_pred CcCCHHHHHHHHHHH-cCCC-EEEEcCCChHHhHHHHhhhc
Confidence 356789999999999 9885 77899999888877665544
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.31 E-value=0.00019 Score=74.47 Aligned_cols=131 Identities=14% Similarity=0.121 Sum_probs=79.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++|+++++.++.|+ +.|+++.++||--...+..+++++|+ +... -.+.-+.-.+++-.
T Consensus 135 ~Lr~G~~e~~~~l~-~~~i~~~IvSgG~~~~ie~vl~~lg~--~~~n-------i~I~sN~l~f~~~~------------ 192 (291)
T d2bdua1 135 MLKEGYENFFGKLQ-QHGIPVFIFSAGIGDVLEEVIRQAGV--YHSN-------VKVVSNFMDFDENG------------ 192 (291)
T ss_dssp CBCBTHHHHHHHHH-HHTCCEEEEEEEEHHHHHHHHHHTTC--CBTT-------EEEEEECEEECTTS------------
T ss_pred CcccCHHHHHHHHH-HcCCeEEEEcCChHHHHHHHHHHcCC--CccC-------ceEEeeEEEEeCCe------------
Confidence 38999999999999 99999999999999999999999999 4310 01111111111000
Q ss_pred EEEe-----cChhhHHHHH----HHHHh--cCCeEEEEcCCccCHHHhhhC---CccEEeCC-CCh-H----HHHhcCCe
Q 043517 666 VMAN-----ASPLDKLLMV----QCLKQ--KGEVVAVTGMSTRDAPSLKEA---DVGVSIGE-RSA-Q----FARDCSDI 725 (956)
Q Consensus 666 v~ar-----~~p~~K~~iv----~~lq~--~g~~v~~iGDG~ND~~al~~A---dvGIamg~-~~~-~----~ak~~Ad~ 725 (956)
+... .....|...+ ..++. ....|.++|||.||..|.+.+ +.+++.|- +.. + .=.++-|+
T Consensus 193 ~~~~~~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DI 272 (291)
T d2bdua1 193 VLKGFKGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDI 272 (291)
T ss_dssp BEEEECSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSE
T ss_pred eEeeccCCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCE
Confidence 1111 1122332222 22333 346899999999999998743 33333331 221 1 22367899
Q ss_pred eeccCChhHHHHH
Q 043517 726 VILDENFTTIAAN 738 (956)
Q Consensus 726 vl~~~~~~~i~~~ 738 (956)
|+.++.--.++..
T Consensus 273 Vl~~d~~~~v~~~ 285 (291)
T d2bdua1 273 VLVKEESLEVVNS 285 (291)
T ss_dssp EEETCCBCHHHHH
T ss_pred EEecCCChhHHHH
Confidence 9876654444443
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.24 E-value=0.00025 Score=72.21 Aligned_cols=126 Identities=14% Similarity=0.120 Sum_probs=87.4
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ +.|+++.++||.+...+..+.+++|+ ..-- ...++++.+..
T Consensus 99 ~~~~g~~~~L~~Lk-~~g~~i~i~Tn~~~~~~~~~l~~~~l--~~~f-------~d~~~~~d~~~--------------- 153 (257)
T d1swva_ 99 SPINGVKEVIASLR-ERGIKIGSTTGYTREMMDIVAKEAAL--QGYK-------PDFLVTPDDVP--------------- 153 (257)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEBCSSCHHHHHHHHHHHHH--TTCC-------CSCCBCGGGSS---------------
T ss_pred ccCCcHHHHHHHHH-hcccceeecCCCchhhHHHHHHHHhh--cccc-------ccccccccccc---------------
Confidence 47799999999999 99999999999999999999999998 4310 12233332211
Q ss_pred EEEecChhhHHHHHHHHHhc-CCeEEEEcCCccCHHHhhhCCcc-EEeCCCCh-------H-------------------
Q 043517 666 VMANASPLDKLLMVQCLKQK-GEVVAVTGMSTRDAPSLKEADVG-VSIGERSA-------Q------------------- 717 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~-g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~~-------~------------------- 717 (956)
...-.|+.-....+.+.-. .+.++|+||..+|+.+=+.||+- |++. .|. +
T Consensus 154 -~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (257)
T d1swva_ 154 -AGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI-LGSSELGLTEEEVENMDSVELREKIEVVRN 231 (257)
T ss_dssp -CCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC-TTCTTTCCCHHHHHHSCHHHHHHHHHHHHH
T ss_pred -ccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc-cCCCCCCCCHHHHhhCCHHHHHHHHHHHHH
Confidence 1122444455666666543 47899999999999999999973 3443 221 0
Q ss_pred -HHHhcCCeeeccCChhHHHHHHH
Q 043517 718 -FARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 718 -~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
..+.-||+++. ++..+..+|+
T Consensus 232 ~l~~~gad~vi~--~l~eL~~ii~ 253 (257)
T d1swva_ 232 RFVENGAHFTIE--TMQELESVME 253 (257)
T ss_dssp HHHHTTCSEEES--SGGGHHHHHH
T ss_pred HHHhCCCCEEEC--CHHHHHHHHH
Confidence 11123899988 7777777765
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.01 E-value=0.0002 Score=70.43 Aligned_cols=121 Identities=14% Similarity=0.044 Sum_probs=80.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+.++.++ ..+ ++.++|+.....+..+.+++|+ ... -..++.+.+
T Consensus 84 ~~~~~~~~~l~~l~-~~~-~~~i~t~~~~~~~~~~l~~~gl--~~~--------fd~v~~~~~----------------- 134 (210)
T d2ah5a1 84 QLFPQIIDLLEELS-SSY-PLYITTTKDTSTAQDMAKNLEI--HHF--------FDGIYGSSP----------------- 134 (210)
T ss_dssp EECTTHHHHHHHHH-TTS-CEEEEEEEEHHHHHHHHHHTTC--GGG--------CSEEEEECS-----------------
T ss_pred cchhHHHHHHhhhh-ccc-chhhcccccchhhhHHHHhhcc--ccc--------ccccccccc-----------------
Confidence 45689999999999 875 8889999999999999999999 431 112222111
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc-cEEe--CCCChHHH-HhcCCeeeccCChhHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV-GVSI--GERSAQFA-RDCSDIVILDENFTTIAAN 738 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIam--g~~~~~~a-k~~Ad~vl~~~~~~~i~~~ 738 (956)
.....|+-...+.+.++-..+.++||||+.||..|-+.||+ .|++ |.+..+.. ...+|+++. ++..+.+.
T Consensus 135 -~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~~ 208 (210)
T d2ah5a1 135 -EAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp -SCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred -cccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence 11223333344444444445789999999999999999997 3444 43333333 344899977 56666554
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.99 E-value=0.00088 Score=66.78 Aligned_cols=126 Identities=13% Similarity=0.104 Sum_probs=84.7
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.++++.|+ + |+++.++|+........+.+.+|+ ... -..++...+..
T Consensus 100 ~~~p~~~~~L~~l~-~-~~~i~i~Sn~~~~~~~~~l~~~gl--~~~--------fd~i~~s~~~~--------------- 152 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-G-KYHVGMITDSDTEYLMAHLDALGI--KDL--------FDSITTSEEAG--------------- 152 (230)
T ss_dssp CBCTTHHHHHHHHB-T-TBEEEEEESSCHHHHHHHHHHHTC--GGG--------CSEEEEHHHHT---------------
T ss_pred cccccHHHHHHHhh-c-cCceeeeeccccccchhhhccccc--ccc--------ccccccccccc---------------
Confidence 46799999999998 6 699999999999999999999999 430 12222222111
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCC-ccCHHHhhhCCccEE-eCC-CChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMS-TRDAPSLKEADVGVS-IGE-RSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG-~ND~~al~~AdvGIa-mg~-~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
...-.|+-=..+++.+.-....++++||. .+|+.+-+.||+-.. +.. .........+|+++. +++.+.++|++
T Consensus 153 -~~KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~~ 228 (230)
T d1x42a1 153 -FFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVS--DLREVIKIVDE 228 (230)
T ss_dssp -BCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEES--STTHHHHHHHH
T ss_pred -ccchhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEEC--CHHHHHHHHHH
Confidence 01112222244445554445789999997 689999999988633 211 223334557899888 78888888764
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.68 E-value=0.0025 Score=61.09 Aligned_cols=68 Identities=19% Similarity=0.174 Sum_probs=48.9
Q ss_pred hhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc--EEeC--CCChHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 672 PLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG--VSIG--ERSAQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 672 p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG--Iamg--~~~~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
|.--..+.+.+.-..+.+.||||..+|..|=+.|+++ +.+. ....+.....||+++. ++..+.++|++
T Consensus 111 p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l~dl~~~ikk 182 (182)
T d2gmwa1 111 PGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLADLPQAIKK 182 (182)
T ss_dssp CHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGGGHHHHHHC
T ss_pred cccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC--CHHHHHHHhcC
Confidence 3334555666655567899999999999999999985 3333 1223455567999988 88888888763
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.59 E-value=0.00047 Score=67.58 Aligned_cols=119 Identities=13% Similarity=0.091 Sum_probs=80.8
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.|++.+.++.|+ + ++++.++|+.....+..+.+++|+ ... -..++++.+..
T Consensus 83 ~~~g~~~~L~~l~-~-~~~~~ivT~~~~~~~~~~l~~~~l-~~~---------f~~i~~~~~~~---------------- 134 (207)
T d2hdoa1 83 LYPGITSLFEQLP-S-ELRLGIVTSQRRNELESGMRSYPF-MMR---------MAVTISADDTP---------------- 134 (207)
T ss_dssp ECTTHHHHHHHSC-T-TSEEEEECSSCHHHHHHHHTTSGG-GGG---------EEEEECGGGSS----------------
T ss_pred cccchhhhhhhhc-c-cccccccccccccccccccccccc-ccc---------ccccccccccc----------------
Confidence 5589999999998 7 699999999999999999999999 322 22223222111
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEe---CCCChHHHHhcCCeeeccCChhHHH
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSI---GERSAQFARDCSDIVILDENFTTIA 736 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIam---g~~~~~~ak~~Ad~vl~~~~~~~i~ 736 (956)
...-.|+--..+++.++-..+.++|+||+.+|..+-+.||+.... | .......+.+|.++. ++..+.
T Consensus 135 ~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 135 KRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp CCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGG
T ss_pred cchhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHH
Confidence 011134444555555554457899999999999999999998653 3 233334456788775 555443
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.47 E-value=0.001 Score=64.88 Aligned_cols=118 Identities=11% Similarity=0.086 Sum_probs=77.5
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.|++.++++.|+ +.|+++.++|+... .+..+.+++|+ ..- -..++.+.+. .
T Consensus 83 ~~pgv~~~L~~L~-~~g~~~~v~Sn~~~-~~~~~l~~~gl--~~~--------f~~i~~s~~~----------------~ 134 (204)
T d2go7a1 83 LMPGAREVLAWAD-ESGIQQFIYTHKGN-NAFTILKDLGV--ESY--------FTEILTSQSG----------------F 134 (204)
T ss_dssp ECTTHHHHHHHHH-HTTCEEEEECSSCT-HHHHHHHHHTC--GGG--------EEEEECGGGC----------------C
T ss_pred ccchHHhhhhccc-ccccchhhhcccch-hhhhhhhhccc--ccc--------cccccccccc----------------c
Confidence 5699999999999 99999999998765 55678889999 430 1122221111 0
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCCCChHHHHhcCCeeeccCChhHHHHHH
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGERSAQFARDCSDIVILDENFTTIAANL 739 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~~~~ak~~Ad~vl~~~~~~~i~~~i 739 (956)
...-.|+--..+++.+.-..+.++||||+.+|..+-+.||+. |.+. .+. ..+|..+. ++..+.+++
T Consensus 135 ~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~----~~~~~~~~--~~~dl~~l~ 201 (204)
T d2go7a1 135 VRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST----YEGNHRIQ--ALADISRIF 201 (204)
T ss_dssp CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS----CTTEEECS--STTHHHHHT
T ss_pred ccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc-CCC----CCcCeecC--CHHHHHHHh
Confidence 111244444566666655567999999999999999999985 4454 332 22445443 455555443
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.39 E-value=0.016 Score=50.60 Aligned_cols=112 Identities=13% Similarity=0.167 Sum_probs=75.7
Q ss_pred EEEEEEecCcccccCCCCHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHhhcCCChhhhcccccccccCCCCCeEEEEE
Q 043517 407 NMAELWIATDNSFIKSTSADVLDALREAIATTSYDEAAVDDDDALLLWAKEFLDVDGDKMKQNCTVEAFNISKNRAGLLL 486 (956)
Q Consensus 407 ~v~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~svv~ 486 (956)
+|+++.+.+.. ..++|..+++++..+.| |+.+|++++++ +.+.+.... -.|....++ ++-.
T Consensus 1 eVt~i~~~~~~---------e~elL~~aaslE~~S~H--PlA~AIv~~a~-~~~~~~~~~------~~~~~~~G~-Gi~g 61 (113)
T d2b8ea2 1 EVTDLVPLNGD---------ERELLRLAAIAERRSEH--PIAEAIVKKAL-EHGIELGEP------EKVEVIAGE-GVVA 61 (113)
T ss_dssp EEEEEEESSSC---------HHHHHHHHHHHTTTCCS--HHHHHHHHHHH-TTTCCCCCC------SCEEEETTT-EEEE
T ss_pred CceEEEecCCC---------HHHHHHHHHHHHCcCCC--chHHHHHHHHH-HhcCCCCcc------ccceeeccc-eEEe
Confidence 35666655431 24778888999988887 99999999998 666654331 223222222 2221
Q ss_pred ecCCCCCCCCceEEEEEeCchHHHHHhchhccccCCccccCCHHHHHHHHHHHHHHhhccccceeeeeEEeeccccchHH
Q 043517 487 KWNGSESDGDNSVHIHWRGSPEIILSMCTHYLDRHGTLQTLDEHKRDAFNNFIRDIEANHHSLRCISFACKRVEQQNEEE 566 (956)
Q Consensus 487 ~~~~~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~ 566 (956)
.. +++ |+++.+.+... .+ .+.+.+.++++.. +|..++.+|.
T Consensus 62 ---------~~-v~v---G~~~~~~~~~~----------~~----~~~~~~~~~~~~~--~G~T~v~va~---------- 102 (113)
T d2b8ea2 62 ---------DG-ILV---GNKRLMEDFGV----------AV----SNEVELALEKLER--EAKTAVIVAR---------- 102 (113)
T ss_dssp ---------TT-EEE---ECHHHHHHTTC----------CC----CHHHHHHHHHHHT--TTCEEEEEEE----------
T ss_pred ---------EE-EEE---CcHHHHHhcCC----------CC----CHHHHHHHHHHHh--CCCeEEEEEE----------
Confidence 22 544 99999865422 12 2356778888999 9999999998
Q ss_pred HHhhhccCcEEEEEeee
Q 043517 567 IIELTECGLTWLGLVRL 583 (956)
Q Consensus 567 ~~~~~e~~l~~lGli~~ 583 (956)
|..++|++++
T Consensus 103 -------d~~~~G~ial 112 (113)
T d2b8ea2 103 -------NGRVEGIIAV 112 (113)
T ss_dssp -------TTEEEEEEEE
T ss_pred -------CCEEEEEEEE
Confidence 7799999986
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.30 E-value=0.0028 Score=63.17 Aligned_cols=118 Identities=15% Similarity=0.129 Sum_probs=78.7
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
-.+.|++.+.+++|+ +.|+++.++|+..........+.+|+ ..-. ...+...+..
T Consensus 126 ~~~~pg~~e~l~~L~-~~g~~l~i~Tn~~~~~~~~~~~~~~~--~~~~-------~~~~~~~d~~--------------- 180 (253)
T d1zs9a1 126 AEFFADVVPAVRKWR-EAGMKVYIYSSGSVEAQKLLFGHSTE--GDIL-------ELVDGHFDTK--------------- 180 (253)
T ss_dssp BCCCTTHHHHHHHHH-HTTCEEEEECSSCHHHHHHHHHTBTT--BCCG-------GGCSEEECGG---------------
T ss_pred cccCCCHHHHHHHHh-hccCceeecCCCcHHHHHHHHHHcCc--chhh-------hhcceeeccc---------------
Confidence 346899999999999 99999999999999999999999998 3210 0000000000
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEe----CCCChHHHHhcCCeeec
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSI----GERSAQFARDCSDIVIL 728 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIam----g~~~~~~ak~~Ad~vl~ 728 (956)
....-.|+-=....+.+.-..+.++|+||..+|+.+-++||+-... |..........++.++.
T Consensus 181 -~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 181 -IGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp -GCCTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred -cccCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 0112233333455555555568999999999999999999996554 32222233345566665
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.97 E-value=0.0079 Score=60.00 Aligned_cols=125 Identities=12% Similarity=0.060 Sum_probs=82.5
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.|++.++++.|+ + |+++.++|+.+........+++|+ ... -..++.+.+..
T Consensus 110 ~~~~~~~~L~~L~-~-~~~l~i~Tn~~~~~~~~~l~~~gl-~~~---------fd~i~~s~~~~---------------- 161 (247)
T d2gfha1 110 LADDVKAMLTELR-K-EVRLLLLTNGDRQTQREKIEACAC-QSY---------FDAIVIGGEQK---------------- 161 (247)
T ss_dssp CCHHHHHHHHHHH-T-TSEEEEEECSCHHHHHHHHHHHTC-GGG---------CSEEEEGGGSS----------------
T ss_pred cCccHHHHHHHhh-c-ccceEEeecccchhhhhhhhhccc-ccc---------ccccccccccc----------------
Confidence 6799999999999 7 789999999999999999999999 322 11222222111
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCcc-EEeC-CCC--hHHHHhcCCeeeccCChhHHHHHHHH
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMST-RDAPSLKEADVG-VSIG-ERS--AQFARDCSDIVILDENFTTIAANLKW 741 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~-ND~~al~~AdvG-Iamg-~~~--~~~ak~~Ad~vl~~~~~~~i~~~i~~ 741 (956)
.+.-+|+-=..+.+.+.-..+.++|+||.. +|+.+-+.||+. +..- ..+ .......+|+++. ++..+.++|++
T Consensus 162 ~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~~ 239 (247)
T d2gfha1 162 EEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQS 239 (247)
T ss_dssp SCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHHH
T ss_pred cchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHHH
Confidence 011122222344444544456899999995 899999999996 4321 011 1122234788887 78888888764
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.74 E-value=0.0041 Score=58.40 Aligned_cols=89 Identities=10% Similarity=-0.066 Sum_probs=64.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCC-HHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDD-INIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~-~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
++.|++.++++.|+ +.|+++.++|+-+ ...+..+.+..++ ... ...
T Consensus 46 ~l~pgv~e~L~~L~-~~G~~~~v~S~~~~~~~~~~~l~~~~~--~~~--------~~~---------------------- 92 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQ-SLGVPVAAASRTSEIQGANQLLELFDL--GKY--------FIQ---------------------- 92 (164)
T ss_dssp CCCTTHHHHHHHHH-HTTCCEEEEECCSCHHHHHHHHHHTTC--GGG--------CSE----------------------
T ss_pred ccchHHHHHHHHHH-HCCCcEEEEeccccchhhccchhcccc--ccc--------cee----------------------
Confidence 47899999999999 9999999999755 4566777788887 320 000
Q ss_pred eEEEecChh--hHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc
Q 043517 665 RVMANASPL--DKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 665 ~v~ar~~p~--~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG 708 (956)
+...-.|. .-.++.+.+.-..+.++|+||..+|+.+-+.|++-
T Consensus 93 -~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~ 137 (164)
T d1u7pa_ 93 -REIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVT 137 (164)
T ss_dssp -EEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred -eecccCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCE
Confidence 22333333 33445555555567999999999999999999884
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.68 E-value=0.01 Score=56.70 Aligned_cols=108 Identities=16% Similarity=0.071 Sum_probs=71.0
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.|++.+.++.|+ +.|+++.++|+.+.... .+.+++|+ ... -..++.+++...
T Consensus 79 ~~~~gv~~~l~~l~-~~g~~~~i~Sn~~~~~~-~~l~~~~l--~~~--------fd~i~~~~~~~~-------------- 132 (187)
T d2fi1a1 79 ILFEGVSDLLEDIS-NQGGRHFLVSHRNDQVL-EILEKTSI--AAY--------FTEVVTSSSGFK-------------- 132 (187)
T ss_dssp CBCTTHHHHHHHHH-HTTCEEEEECSSCTHHH-HHHHHTTC--GGG--------EEEEECGGGCCC--------------
T ss_pred cccchhHHHHHHHH-hhhccccccccCccchh-hhhhhhcc--ccc--------cccccccccccc--------------
Confidence 46699999999999 99999999999776554 56788998 330 222333222110
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeCCCChHHHHhcCC
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIGERSAQFARDCSD 724 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg~~~~~~ak~~Ad 724 (956)
..-.|+--..+.+.+. .+.+.++||..+|..+-+.||+-...= ++.+..++..|
T Consensus 133 --~KP~p~~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d 186 (187)
T d2fi1a1 133 --RKPNPESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 186 (187)
T ss_dssp --CTTSCHHHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred --cCCCHHHHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcC
Confidence 1112333334444433 346899999999999999999875433 56666666554
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.44 E-value=0.0033 Score=57.79 Aligned_cols=98 Identities=8% Similarity=-0.076 Sum_probs=60.5
Q ss_pred cccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhh--
Q 043517 584 KSAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMV-- 661 (956)
Q Consensus 584 ~d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~-- 661 (956)
++++.|++.+.++.|+ +.|++++++||++......+.+.++. .. .......
T Consensus 34 ~~~~~p~v~~~l~~l~-~~G~~Iii~T~R~~~~~~~t~~~l~~-~~-------------------------~~~~~~~~~ 86 (149)
T d1ltqa1 34 TDVINPMVVELSKMYA-LMGYQIVVVSGRESGTKEDPTKYYRM-TR-------------------------KWVEDIAGV 86 (149)
T ss_dssp GCCBCHHHHHHHHHHH-HTTCEEEEEECSCCCCSSSTTHHHHH-HH-------------------------HHHHHTTCC
T ss_pred cCccCHHHHHHHHHHH-hccCeEEEEecCcHHHHHHHHHHHHH-Hh-------------------------hhhhhcCCC
Confidence 5788999999999999 99999999999974322111111100 00 0000000
Q ss_pred ccceEEEe------cChhhHHHHHHHHHhcC-CeEEEEcCCccCHHHhhhCCcc
Q 043517 662 DNVRVMAN------ASPLDKLLMVQCLKQKG-EVVAVTGMSTRDAPSLKEADVG 708 (956)
Q Consensus 662 ~~~~v~ar------~~p~~K~~iv~~lq~~g-~~v~~iGDG~ND~~al~~AdvG 708 (956)
.....+.+ -.+.-|..+.+.+...+ ++++|+||...|+.|.+.+|+=
T Consensus 87 ~~~~~~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 87 PLVMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp CCSEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred cEEEeecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 00011221 12345777777766554 4678899999999999999875
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.98 E-value=0.015 Score=56.58 Aligned_cols=123 Identities=11% Similarity=0.095 Sum_probs=83.9
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
.+.+++.++++.++ +.|+++.++|+-.........+..|+ ... -..++...+..
T Consensus 93 ~~~~~~~~~l~~l~-~~~~~~~i~tn~~~~~~~~~~~~~~~-~~~---------fd~~~~s~~~~--------------- 146 (220)
T d1zrna_ 93 APFSEVPDSLRELK-RRGLKLAILSNGSPQSIDAVVSHAGL-RDG---------FDHLLSVDPVQ--------------- 146 (220)
T ss_dssp EECTTHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHHTTC-GGG---------CSEEEESGGGT---------------
T ss_pred cccchhHHHHHHHH-hcCCeEEeecchHHHHHHHHHhhccc-ccc---------ccceeeeeeee---------------
Confidence 35688999999999 99999999999999999999999888 322 12222222211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEEeC---CCChHHHHhcCCeeeccCChhHHHH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVSIG---ERSAQFARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIamg---~~~~~~ak~~Ad~vl~~~~~~~i~~ 737 (956)
...-.|+-=..+.+.+.-..+.++||||..+|+.+-+.||+-.+.- ....+.....+|+++. ++..+.+
T Consensus 147 -~~KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~ 218 (220)
T d1zrna_ 147 -VYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVE 218 (220)
T ss_dssp -CCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHT
T ss_pred -ccccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHh
Confidence 1112333444555666555678999999999999999999875432 1222233345788886 6766654
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.95 E-value=0.041 Score=53.21 Aligned_cols=137 Identities=19% Similarity=0.209 Sum_probs=87.2
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcC--------------
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSS-------------- 652 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~-------------- 652 (956)
+-||+.++++.++ +. ...+++|---..-+.++|+.+|+ .. ..-.+.-++++.
T Consensus 82 lvpgA~~~lk~l~-~~-m~~yIvSTSY~qyi~al~~~~gf--p~----------e~~~T~~~lD~~~~p~ee~e~ll~i~ 147 (308)
T d1y8aa1 82 FVPDAEKAMATLQ-ER-WTPVVISTSYTQYLRRTASMIGV--RG----------ELHGTEVDFDSIAVPEGLREELLSII 147 (308)
T ss_dssp BCTTHHHHHHHHH-TT-CEEEEEEEEEHHHHHHHHHHTTC--CS----------EEEEEBCCGGGCCCCHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHH-hh-CCcEEEeccHHHHHHHHHhhcCC--Cc----------eeecccccccccCCChHHHHHHHHHh
Confidence 3489999999998 76 57777777777888999999999 32 122222222211
Q ss_pred ------CHHHHHh-------------hhccceEEEecChhhHHHHHHHHHhc-C-CeEEEEcCCccCHHHhhhCCc--cE
Q 043517 653 ------SEETRSL-------------MVDNVRVMANASPLDKLLMVQCLKQK-G-EVVAVTGMSTRDAPSLKEADV--GV 709 (956)
Q Consensus 653 ------~~~~~~~-------------~~~~~~v~ar~~p~~K~~iv~~lq~~-g-~~v~~iGDG~ND~~al~~Adv--GI 709 (956)
+.+++.+ ++..++.. -...|.++++..-+. + ...+++||+..|..||+.|.= |+
T Consensus 148 ~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGl 224 (308)
T d1y8aa1 148 DVIASLSGEELFRKLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGV 224 (308)
T ss_dssp HHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCE
T ss_pred hhccCccHHHHHHHHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCe
Confidence 1112111 22222222 124566655443322 2 345899999999999998743 55
Q ss_pred EeCCCChHHHHhcCCeeeccCChhHHHHHHH
Q 043517 710 SIGERSAQFARDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 710 amg~~~~~~ak~~Ad~vl~~~~~~~i~~~i~ 740 (956)
|+.-||.+-+-..||+.+.+.+-..+..++.
T Consensus 225 aIsFNGN~Yal~eA~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 225 AIAFNGNEYALKHADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp EEEESCCHHHHTTCSEEEECSSTHHHHHHHH
T ss_pred eEEecCccccccccceEEeccchhHHHHHHH
Confidence 5555899999999999998887666665543
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.86 E-value=0.012 Score=57.62 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=72.8
Q ss_pred ccCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 585 SAYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 585 d~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
.++-|++.+.++.|+ +.|+++.++|+... +....+..|+ ... -..++.+.+..
T Consensus 90 ~~~~~g~~~~l~~l~-~~~~~i~i~s~~~~--~~~~l~~~~l-~~~---------f~~i~~~~~~~-------------- 142 (221)
T d1o08a_ 90 ADVYPGILQLLKDLR-SNKIKIALASASKN--GPFLLERMNL-TGY---------FDAIADPAEVA-------------- 142 (221)
T ss_dssp GGBCTTHHHHHHHHH-HTTCEEEECCSCTT--HHHHHHHTTC-GGG---------CSEECCTTTSS--------------
T ss_pred ccccCCceecccccc-ccccceEEEeecch--hhHHHHhhcc-ccc---------ccccccccccc--------------
Confidence 456789999999999 99999999999754 5778888898 332 12233332211
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc-cEEeCCCChHHHHhcCCeeec
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV-GVSIGERSAQFARDCSDIVIL 728 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIamg~~~~~~ak~~Ad~vl~ 728 (956)
...-.|+-=....+.++-..+.++|+||..+|+.+-+.||+ .|+++ .+. ....++.++.
T Consensus 143 --~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~-~~~--~~~~~~~~~~ 202 (221)
T d1o08a_ 143 --ASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG-RPE--DLGDDIVIVP 202 (221)
T ss_dssp --SCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-CHH--HHCSSSEEES
T ss_pred --ccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEEC-Chh--hcccccEEcC
Confidence 11122333344444444446789999999999999999997 45555 332 2334555544
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.69 E-value=0.0076 Score=60.72 Aligned_cols=35 Identities=9% Similarity=0.130 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhc
Q 043517 589 SEVKQAIEDCRESAGIKIKLILEDDINIARLIAINS 624 (956)
Q Consensus 589 ~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~ 624 (956)
+++.++|++|+ ++|++++++|+....+...+++++
T Consensus 21 ~~a~~~i~~l~-~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQ-EKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHH-HTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHH-HCCCCEEEEeCCCCCCHHHHHHHH
Confidence 88999999999 999999999988877777776654
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.66 E-value=0.032 Score=56.08 Aligned_cols=63 Identities=17% Similarity=0.170 Sum_probs=42.2
Q ss_pred HHHHHHHHhcCCeEEEEcCCc-cCHHHhhhCCc-cEEeC--CCChHHHHh---cCCeeeccCChhHHHHHHH
Q 043517 676 LLMVQCLKQKGEVVAVTGMST-RDAPSLKEADV-GVSIG--ERSAQFARD---CSDIVILDENFTTIAANLK 740 (956)
Q Consensus 676 ~~iv~~lq~~g~~v~~iGDG~-ND~~al~~Adv-GIamg--~~~~~~ak~---~Ad~vl~~~~~~~i~~~i~ 740 (956)
....+.+.-..+.++||||.. +|+.+-+.|++ +|.+. ....+.... .+|+++. ++..+.++|+
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l~ 261 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAKAVQ 261 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHHHHC
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHHHhC
Confidence 344444444467899999995 69999999997 55553 122332222 3589888 8888887763
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.38 E-value=0.013 Score=56.48 Aligned_cols=88 Identities=15% Similarity=0.149 Sum_probs=62.1
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCC----HHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhc
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDD----INIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVD 662 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~----~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 662 (956)
+.|++.+.++.++ +.|++|+.+|||. ..|+..+.+.+|+ ..... ...
T Consensus 87 p~pga~~fl~~~~-~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~--p~~~~------~~v-------------------- 137 (209)
T d2b82a1 87 PKEVARQLIDMHV-RRGDAIFFVTGRSPTKTETVSKTLADNFHI--PATNM------NPV-------------------- 137 (209)
T ss_dssp ECHHHHHHHHHHH-HHTCEEEEEECSCCCSSCCHHHHHHHHTTC--CTTTB------CCC--------------------
T ss_pred cchhHHHHHHHHH-HcCCeEEEEeCCchhhHHHHHHHHHHHcCC--Ccccc------cce--------------------
Confidence 5689999999999 9999999999986 3566667777998 32110 111
Q ss_pred cceEEEec--ChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc-cEE
Q 043517 663 NVRVMANA--SPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV-GVS 710 (956)
Q Consensus 663 ~~~v~ar~--~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIa 710 (956)
++.+- ..+.|.+.++. ..+++++||..+|..+-++|++ +|-
T Consensus 138 ---ll~~~~~~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iR 181 (209)
T d2b82a1 138 ---IFAGDKPGQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIR 181 (209)
T ss_dssp ---EECCCCTTCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEE
T ss_pred ---EeeCCCCCchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceE
Confidence 22221 22345555543 4589999999999999999985 344
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.60 E-value=0.071 Score=51.64 Aligned_cols=124 Identities=14% Similarity=0.107 Sum_probs=78.5
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccceE
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVRV 666 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 666 (956)
+.+++.+.+++++ . +..++|+-....+..+.+++|+ ..-- ...+..+..... -
T Consensus 86 ~~~g~~~~L~~l~-~---~~~i~t~~~~~~~~~~l~~~~l--~~~f-------~~~~~~~~~~~~--------------~ 138 (222)
T d2fdra1 86 IIDGVKFALSRLT-T---PRCICSNSSSHRLDMMLTKVGL--KPYF-------APHIYSAKDLGA--------------D 138 (222)
T ss_dssp BCTTHHHHHHHCC-S---CEEEEESSCHHHHHHHHHHTTC--GGGT-------TTCEEEHHHHCT--------------T
T ss_pred hhhhHHHHhhhcc-c---cceeeeecchhhhhhhhccccc--cccc-------ceeecccccccc--------------c
Confidence 6688888887776 4 5578999999999999999999 4310 112222221110 0
Q ss_pred EEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCcc-EEeCCCCh-------H-HHHhcCCeeeccCChhHHHH
Q 043517 667 MANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVG-VSIGERSA-------Q-FARDCSDIVILDENFTTIAA 737 (956)
Q Consensus 667 ~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvG-Iamg~~~~-------~-~ak~~Ad~vl~~~~~~~i~~ 737 (956)
.+.-.|+.=....+.+.-..+.++|+||..+|+.+=+.||+- |.+. .+. + ....-||+++. ++..+..
T Consensus 139 ~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~--~l~eL~~ 215 (222)
T d2fdra1 139 RVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPA 215 (222)
T ss_dssp CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHH
T ss_pred ccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEEC--CHHHHHH
Confidence 011123333455555555567899999999999999999974 4443 222 1 12234899998 7777766
Q ss_pred HHH
Q 043517 738 NLK 740 (956)
Q Consensus 738 ~i~ 740 (956)
+|.
T Consensus 216 ll~ 218 (222)
T d2fdra1 216 VIA 218 (222)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.18 E-value=0.051 Score=52.80 Aligned_cols=37 Identities=14% Similarity=-0.041 Sum_probs=27.9
Q ss_pred HHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc-cEEeC
Q 043517 676 LLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV-GVSIG 712 (956)
Q Consensus 676 ~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIamg 712 (956)
.+..+.+.-..+.+.||||..+|..+=+.|++ +|.+.
T Consensus 136 ~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~ 173 (209)
T d2o2xa1 136 VEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLV 173 (209)
T ss_dssp HHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEE
T ss_pred hHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEe
Confidence 44445554445789999999999999999998 45553
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=93.07 E-value=0.03 Score=55.98 Aligned_cols=38 Identities=8% Similarity=0.079 Sum_probs=29.8
Q ss_pred cHHHHHHHHHHHhhCCCEEEEEcC---CCHHHHHHHHHhcCC
Q 043517 588 ASEVKQAIEDCRESAGIKIKLILE---DDINIARLIAINSGL 626 (956)
Q Consensus 588 r~~~~~~I~~l~~~~Gi~v~m~TG---d~~~ta~~ia~~~Gi 626 (956)
=+++.++|+.|+ ++|++++++|+ +........-+++|+
T Consensus 21 i~~a~e~i~~l~-~~g~~~~~~TN~~~~~~~~~~~~l~~~G~ 61 (250)
T d2c4na1 21 VPGAAEFLHGIM-DKGLPLVLLTNYPSQTGQDLANRFATAGV 61 (250)
T ss_dssp CTTHHHHHHHHH-HTTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHH-HCCCcEEEEeCCCCCCHHHHHHHHhhccc
Confidence 378999999999 99999999985 445555555566787
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.99 E-value=0.063 Score=51.86 Aligned_cols=103 Identities=14% Similarity=0.119 Sum_probs=67.1
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCC----CHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhc
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILED----DINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVD 662 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd----~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 662 (956)
+++++.+.++.|+ +.|+++.++|+- ............|+ .+- -..++.+.+..
T Consensus 98 ~~~~~~~~L~~L~-~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l--~~~--------fd~i~~s~~~~------------ 154 (222)
T d1cr6a1 98 INRPMLQAAIALK-KKGFTTCIVTNNWLDDGDKRDSLAQMMCEL--SQH--------FDFLIESCQVG------------ 154 (222)
T ss_dssp ECHHHHHHHHHHH-HTTCEEEEEECCCCCCSSSHHHHHHHHHHH--GGG--------CSEEEEHHHHS------------
T ss_pred CCccHHHHHHHHH-hcCCceEEeeccccccHHHHHHHHHHhcCh--Hhh--------hceeeehhhcc------------
Confidence 6799999999999 999999999963 23344445556666 320 11222222111
Q ss_pred cceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc-cEEeCCCChH
Q 043517 663 NVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV-GVSIGERSAQ 717 (956)
Q Consensus 663 ~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIamg~~~~~ 717 (956)
...-.|+--....+.++-..+.++|+||..+|+.+-+.||+ +|-+. ++.+
T Consensus 155 ----~~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~ 205 (222)
T d1cr6a1 155 ----MIKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH-NTAS 205 (222)
T ss_dssp ----CCTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC-SSSH
T ss_pred ----CCCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC-Ccch
Confidence 11123444556666666667889999999999999999997 45454 4433
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=91.40 E-value=0.24 Score=48.25 Aligned_cols=124 Identities=15% Similarity=0.173 Sum_probs=80.8
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccce
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNVR 665 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 665 (956)
++.+++.+++++|+ ++++.++|..+...+...-+..|+ .+. -..++++.+...
T Consensus 93 ~~~~~~~~~L~~l~---~~~~~v~s~~~~~~~~~~~~~~~~-~~~---------fd~v~~s~~~~~-------------- 145 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA---PLKRAILSNGAPDMLQALVANAGL-TDS---------FDAVISVDAKRV-------------- 145 (245)
T ss_dssp CBCTTHHHHHHHHT---TSEEEEEESSCHHHHHHHHHHTTC-GGG---------CSEEEEGGGGTC--------------
T ss_pred ccchhhhHHHHHHh---hhceeEEeccchHHHHHHHhhccc-ccc---------cccccccccccc--------------
Confidence 45688888888776 578889999999999999999998 332 223343333211
Q ss_pred EEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccEE-eCCCChH-------------------------HH
Q 043517 666 VMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGVS-IGERSAQ-------------------------FA 719 (956)
Q Consensus 666 v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGIa-mg~~~~~-------------------------~a 719 (956)
..-.|+-=...++.+.-..+.+++|||..+|+.+=+.||+--. +...+.+ ..
T Consensus 146 --~KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (245)
T d1qq5a_ 146 --FKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETY 223 (245)
T ss_dssp --CTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTT
T ss_pred --cCccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhc
Confidence 1112333344555555556789999999999999999987532 3211110 00
Q ss_pred HhcCCeeeccCChhHHHHHHH
Q 043517 720 RDCSDIVILDENFTTIAANLK 740 (956)
Q Consensus 720 k~~Ad~vl~~~~~~~i~~~i~ 740 (956)
....|+++. ++..++.+|+
T Consensus 224 ~~~pd~~i~--~l~el~~lv~ 242 (245)
T d1qq5a_ 224 AEAPDFVVP--ALGDLPRLVR 242 (245)
T ss_dssp SCCCSEEES--SGGGHHHHHH
T ss_pred cCCCCEEEC--CHHHHHHHHH
Confidence 124788887 8888888775
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.76 E-value=0.11 Score=49.69 Aligned_cols=99 Identities=12% Similarity=0.071 Sum_probs=61.3
Q ss_pred CcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHH----HHHhcCCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhc
Q 043517 587 YASEVKQAIEDCRESAGIKIKLILEDDINIARL----IAINSGLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVD 662 (956)
Q Consensus 587 lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~----ia~~~Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 662 (956)
+.+++.+.+++|+ +.|+++.++|+........ .-...|+ .+. -..++.+.+..
T Consensus 100 ~~~~~~~~l~~L~-~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~-~~~---------fd~i~~s~~~~------------ 156 (225)
T d1zd3a1 100 INRPMLQAALMLR-KKGFTTAILTNTWLDDRAERDGLAQLMCEL-KMH---------FDFLIESCQVG------------ 156 (225)
T ss_dssp ECHHHHHHHHHHH-HTTCEEEEEECCCCCCSTTHHHHHHHHHHH-HTT---------SSEEEEHHHHT------------
T ss_pred CCccHHHHHHHHH-hccCccccccccchhhHHHHHHHHhhhcCh-Hhh---------ccEEEeccccc------------
Confidence 5799999999999 9999999999765433322 2223333 111 11222222111
Q ss_pred cceEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc-cEEeC
Q 043517 663 NVRVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV-GVSIG 712 (956)
Q Consensus 663 ~~~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIamg 712 (956)
...-+|+--..+++.+.-..+.++|+||...|+.+-++||+ +|.+.
T Consensus 157 ----~~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 157 ----MVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp ----CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred ----cchhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 01112333345555555455789999999999999999999 56554
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=89.16 E-value=0.27 Score=48.66 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=35.7
Q ss_pred HHHHHHHHHhcCCeEEEEcCCcc-CHHHhhhCCc-cEEeCCCC---hHHHHhc---CCeeec
Q 043517 675 KLLMVQCLKQKGEVVAVTGMSTR-DAPSLKEADV-GVSIGERS---AQFARDC---SDIVIL 728 (956)
Q Consensus 675 K~~iv~~lq~~g~~v~~iGDG~N-D~~al~~Adv-GIamg~~~---~~~ak~~---Ad~vl~ 728 (956)
-..+.+.++-..+.++||||..+ |+.+-++||+ +|.+. +| .+..... .|+++.
T Consensus 186 ~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~-~G~~~~~~~~~~~~~PD~vi~ 246 (253)
T d1wvia_ 186 MNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT-TGFTKPEEVPALPIQPDFVLS 246 (253)
T ss_dssp HHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES-SSSSCTTTGGGCSSCCSEEES
T ss_pred ceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC-CCCCCHHHHhhcCCCCCEEEC
Confidence 34555555555679999999976 9999999999 67664 22 2222222 388876
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=88.63 E-value=0.081 Score=48.95 Aligned_cols=34 Identities=9% Similarity=-0.064 Sum_probs=24.4
Q ss_pred HHHHHHHHhcCCeEEEEcCCccCHHHhhhCCccE
Q 043517 676 LLMVQCLKQKGEVVAVTGMSTRDAPSLKEADVGV 709 (956)
Q Consensus 676 ~~iv~~lq~~g~~v~~iGDG~ND~~al~~AdvGI 709 (956)
.++++.+.-..+.+.||||...|..|=+.|++--
T Consensus 111 ~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~ 144 (161)
T d2fpwa1 111 ERYLAEQAMDRANSYVIGDRATDIQLAENMGING 144 (161)
T ss_dssp GGGC----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred HHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeE
Confidence 4444555445578999999999999999998863
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=84.31 E-value=0.084 Score=49.30 Aligned_cols=100 Identities=7% Similarity=0.044 Sum_probs=60.5
Q ss_pred cCcHHHHHHHHHHHhhCCCEEEEEcCCCHHHHHHHHHhc-CCcccCCCCCCCCCCcceeeechhhhcCCHHHHHhhhccc
Q 043517 586 AYASEVKQAIEDCRESAGIKIKLILEDDINIARLIAINS-GLILKPGAEDHSNGYDAAVIEASVFRSSSEETRSLMVDNV 664 (956)
Q Consensus 586 ~lr~~~~~~I~~l~~~~Gi~v~m~TGd~~~ta~~ia~~~-Gi~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 664 (956)
++.+++.+.++.++ ..|+++.++|+-+...+...-.+. |+ ... -..++.+.+..
T Consensus 84 ~~~~~~~~l~~~l~-~~~~~~~i~t~~~~~~~~~~~~~~~~l--~~~--------fd~v~~s~~~~-------------- 138 (197)
T d2b0ca1 84 ALRPEVIAIMHKLR-EQGHRVVVLSNTNRLHTTFWPEEYPEI--RDA--------ADHIYLSQDLG-------------- 138 (197)
T ss_dssp EECHHHHHHHHHHH-HTTCEEEEEECCCCCTTSCCGGGCHHH--HHH--------CSEEEEHHHHT--------------
T ss_pred ccCchhHHHHHHHH-hcCCeEEEEeCccHHHHHHHHHHcccc--hhh--------ccceeeccccc--------------
Confidence 36789999999999 999999999986554443332222 33 110 01111111110
Q ss_pred eEEEecChhhHHHHHHHHHhcCCeEEEEcCCccCHHHhhhCCc-cEEeC
Q 043517 665 RVMANASPLDKLLMVQCLKQKGEVVAVTGMSTRDAPSLKEADV-GVSIG 712 (956)
Q Consensus 665 ~v~ar~~p~~K~~iv~~lq~~g~~v~~iGDG~ND~~al~~Adv-GIamg 712 (956)
...-.|+-=..+.+.+.-..+.++|+||..+|..+-+.||+ +|.+.
T Consensus 139 --~~Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 139 --MRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp --CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred --ccccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 01112332244455555456789999999999999999997 55554
|