Citrus Sinensis ID: 043630

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
MGRSAFLVAFAGFLLIVQVSLSQHEAAYSYRRNFITWDDLKVDWQKAWLDTRESVNRTRLIIVDKNGGGHSSTVQGAVDLVPENNSERVKIYILPGVYREKVTVPQNKPYISFIGHEQRASETVISWHNKASDKDSNGIELGTYKSASVSVFADFFCATGITFANTVVAVPGGIGMQAVALRLAGDKAMLYKVKVLGTQDTLLDDTGSHYFYQCHIQGSIDFIFGRARSLYQDCVLQSIAEKSGAIAAHHRDIPDDSSGFSFVNCVINGTGKIYLGRAWGNYSRIIYSYSYLEDIIYPTGWSDWNMPYRDRTVVFGEYQCSGKGADRSHRPSWLKSLSYEEVQPFLNVTFIDGKEWLRL
cccHHHHHHHHHHHHHHHHcccccccHHHccccccccccccccccccccccccccccccEEEEccccccccccHHHHHHHcccccccCEEEEECcEEEEEEEEEccccccEEEEEcccccccEEEEccccccccccccccccccccEEEEEEcccEEEEccEEEEccccccccccccEEEEEEcccEEEEEccEEEcccccEEcccccEEEEccEEEEEcEEEEccccEEEEccEEEEEccccEEEEEccccccccccEEEEEccEEECccccccccccccccEEEEEccccccccccccccccccccccccCEEEEEccccccccccccccccccccHHHHcccccccECcccccccc
****AFLVAFAGFLLIVQV****************TWDDLKV**QKAWLDTRESVNRTRLIIVDKNGGGHSSTVQGAVDLVPENNSERVKIYILPGVYREKVTVPQNKPYISFIGHEQRASETVISWHNKASDKDSNGIELGTYKSASVSVFADFFCATGITFANTVVAVPGGIGMQAVALRLAGDKAMLYKVKVLGTQDTLLDDTGSHYFYQCHIQGSIDFIFGRARSLYQDCVLQSIAEKSGAIAAHHRDIPDDSSGFSFVNCVINGTGKIYLGRAWGNYSRIIYSYSYLEDIIYPTGWSDWNMPYRDRTVVFGEYQCSGKGADRSHRPSWLKSLSYEEVQPFLNVTFIDGKEWLRL
xxxxxHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGRSAFLVAFAGFLLIVQVSLSQHEAAYSYRRNFITWDDLKVDWQKAWLDTRESVNRTRLIIVDKNGGGHSSTVQGAVDLVPENNSERVKIYILPGVYREKVTVPQNKPYISFIGHEQRASETVISWHNKASDKDSNGIELGTYKSASVSVFADFFCATGITFANTVVAVPGGIGMQAVALRLAGDKAMLYKVKVLGTQDTLLDDTGSHYFYQCHIQGSIDFIFGRARSLYQDCVLQSIAEKSGAIAAHHRDIPDDSSGFSFVNCVINGTGKIYLGRAWGNYSRIIYSYSYLEDIIYPTGWSDWNMPYRDRTVVFGEYQCSGKGADRSHRPSWLKSLSYEEVQPFLNVTFIDGKEWLRL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Pectinesterase QRT1 Pectinesterase required for cell type-specific pectin degradation to separate microspores.probableQ9FM79

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.1.-Carboxylic ester hydrolases.probable
3.1.1.11Pectinesterase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GQ8, chain A
Confidence level:very confident
Coverage over the Query: 57-359
View the alignment between query and template
View the model in PyMOL
Template: 3GRH, chain A
Confidence level:very confident
Coverage over the Query: 19-326
View the alignment between query and template
View the model in PyMOL